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Blohm A, Domes C, Merian A, Wolf S, Popp J, Frosch T. Comprehensive multi-gas study by means of fiber-enhanced Raman spectroscopy for the investigation of nitrogen cycle processes. Analyst 2024; 149:1885-1894. [PMID: 38357795 DOI: 10.1039/d4an00023d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/16/2024]
Abstract
The extensive use of synthetic fertilizers has led to a considerable increase in reactive nitrogen input into agricultural and natural systems, resulting in negative effects in multiple ecosystems, the so-called nitrogen cascade. Since the global population relies on fertilization for food production, synthetic fertilizer use needs to be optimized by balancing crop yield and reactive nitrogen losses. Fiber-enhanced Raman spectroscopy (FERS) is introduced as a unique method for the simultaneous quantification of multiple gases to the study processes related to the nitrogen cycle. By monitoring changes in the headspace gas concentrations, processes such as denitrification, nitrification, respiration, and nitrogen fixation, as well as fertilizer addition were studied. The differences in concentration between the ambient and prepared process samples were evident in the Raman spectra, allowing for differentiation of process-specific spectra. Gas mixture concentrations were quantified within a range of low ppm to 100% for the gases N2, O2, CO2, N2O, and NH3. Compositional changes were attributed to processes of the nitrogen cycle. With help of multivariate curve resolution, it was possible to quantify N2O and CO2 simultaneously. The impact of fertilizers on N-cycle processes in soil was simulated and analyzed for identifying active processes. Thus, FERS was proven to be a suitable technique to optimize fertilizer composition and to quantify N2O and NH3 emissions, all with a single device and without further sample preparation.
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Affiliation(s)
- Annika Blohm
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Christian Domes
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Andreas Merian
- Biophotonics and Biomedical Engineering Group, Technical University Darmstadt, Merckstraße 25, 64283 Darmstadt, Germany.
| | - Sebastian Wolf
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Jürgen Popp
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
- Abbe Centre of Photonics, Friedrich Schiller University, 07743 Jena, Germany
| | - Torsten Frosch
- Biophotonics and Biomedical Engineering Group, Technical University Darmstadt, Merckstraße 25, 64283 Darmstadt, Germany.
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
- Abbe Centre of Photonics, Friedrich Schiller University, 07743 Jena, Germany
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2
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Blohm A, Domes C, Frosch T. Isotopomeric Peak Assignment for N 2O in Cross-Labeling Experiments by Fiber-Enhanced Raman Multigas Spectroscopy. Anal Chem 2024. [PMID: 38315571 PMCID: PMC10882577 DOI: 10.1021/acs.analchem.3c04236] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2024]
Abstract
Human intervention in nature, especially fertilization, greatly increased the amount of N2O emission. While nitrogen fertilizer is used to improve nitrogen availability and thus plant growth, one negative side effect is the increased emission of N2O. Successful regulation and optimization strategies require detailed knowledge of the processes producing N2O in soil. Nitrification and denitrification, the main processes responsible for N2O emissions, can be differentiated using isotopic analysis of N2O. The interplay between these processes is complex, and studies to unravel the different contributions require isotopic cross-labeling and analytical techniques that enable tracking of the labeled compounds. Fiber-enhanced Raman spectroscopy (FERS) was exploited for sensitive quantification of N2O isotopomers alongside N2, O2, and CO2 in multigas compositions and in cross-labeling experiments. FERS enabled the selective and sensitive detection of specific molecular vibrations that could be assigned to various isotopomer peaks. The isotopomers 14N15N16O (2177 cm-1) and 15N14N16O (2202 cm-1) could be clearly distinguished, allowing site-specific measurements. Also, isotopomers containing different oxygen isotopes, such as 14N14N17O, 14N14N18O, 15N15N16O, and 15N14N18O could be identified. A cross-labeling showed the capability of FERS to disentangle the contributions of nitrification and denitrification to the total N2O fluxes while quantifying the total sample headspace composition. Overall, the presented results indicate the potential of FERS for isotopic studies of N2O, which could provide a deeper understanding of the different pathways of the nitrogen cycle.
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Affiliation(s)
- Annika Blohm
- Leibniz Institute of Photonic Technology, Albert Einstein Str. 9, 07745 Jena, Germany
| | - Christian Domes
- Leibniz Institute of Photonic Technology, Albert Einstein Str. 9, 07745 Jena, Germany
| | - Torsten Frosch
- Biophotonics and Biomedical Engineering Group, Technical University Darmstadt, Merckstr. 25, 64283 Darmstadt, Germany
- Leibniz Institute of Photonic Technology, Albert Einstein Str. 9, 07745 Jena, Germany
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3
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Shirmohammad M, Short MA, Zeng H. Collision Enhanced Raman Scattering (CERS): An Ultra-High Efficient Raman Enhancement Technique for Hollow Core Photonic Crystal Fiber Based Raman Spectroscopy Gas Analyzer. BIOSENSORS 2023; 13:979. [PMID: 37998154 PMCID: PMC10669419 DOI: 10.3390/bios13110979] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2023] [Revised: 11/07/2023] [Accepted: 11/07/2023] [Indexed: 11/25/2023]
Abstract
Raman enhancement techniques are essential for gas analysis to increase the detection sensitivity of a Raman spectroscopy system. We have developed an efficient Raman enhancement technique called the collision-enhanced Raman scattering (CERS), where the active Raman gas as the analyte is mixed with a buffer gas inside the hollow-core photonic-crystal fiber (HCPCF) of a fiber-enhanced Raman spectroscopy (FERS) system. This results in an enhanced Raman signal from the analyte gas. In this study, we first showed that the intensity of the 587 cm-1 stimulated Raman scattering (SRS) peak of H2 confined in an HCPCF is enhanced by as much as five orders of magnitude by mixing with a buffer gas such as helium or N2. Secondly, we showed that the magnitudes of Raman enhancement depend on the type of buffer gas, with helium being more efficient compared to N2. This makes helium a favorable buffer gas for CERS. Thirdly, we applied CERS for Raman measurements of propene, a metabolically interesting volatile organic compound (VOC) with an association to lung cancer. CERS resulted in a substantial enhancement of propene Raman peaks. In conclusion, the CERS we developed is a simple and efficient Raman-enhancing mechanism for improving gas analysis. It has great potential for application in breath analysis for lung cancer detection.
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Affiliation(s)
- Maryam Shirmohammad
- Department of Physics and Astronomy, University of British Columbia, 6224 Agricultural Road, Vancouver, BC V6T 1Z1, Canada;
- Imaging Unit, Integrative Oncology Department, BC Cancer Research Institute, Vancouver, BC V5Z 1L3, Canada;
| | - Michael A. Short
- Imaging Unit, Integrative Oncology Department, BC Cancer Research Institute, Vancouver, BC V5Z 1L3, Canada;
| | - Haishan Zeng
- Department of Physics and Astronomy, University of British Columbia, 6224 Agricultural Road, Vancouver, BC V6T 1Z1, Canada;
- Imaging Unit, Integrative Oncology Department, BC Cancer Research Institute, Vancouver, BC V5Z 1L3, Canada;
- Department of Dermatology and Skin Science, University of British Columbia, Vancouver, BC V5Z 4E8, Canada
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4
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Shirmohammad M, Short MA, Zeng H. A New Gas Analysis Method Based on Single-Beam Excitation Stimulated Raman Scattering in Hollow Core Photonic Crystal Fiber Enhanced Raman Spectroscopy. Bioengineering (Basel) 2023; 10:1161. [PMID: 37892891 PMCID: PMC10604339 DOI: 10.3390/bioengineering10101161] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2023] [Revised: 09/29/2023] [Accepted: 09/30/2023] [Indexed: 10/29/2023] Open
Abstract
We previously developed a hollow-core photonic crystal fiber (HCPCF) based Raman scattering enhancement technique for gas/human breath analysis. It enhances photon-gas molecule interactions significantly but is still based on CW laser excitation spontaneous Raman scattering, which is a low-probability phenomenon. In this work, we explored nanosecond/sub-nanosecond pulsed laser excitation in HCPCF based fiber enhanced Raman spectroscopy (FERS) and successfully induced stimulated Raman scattering (SRS) enhancement. Raman measurements of simple and complex gases were performed using the new system to assess its feasibility for gas analysis. We studied the gas Raman scattering characteristics, the relationship between Raman intensities and pump energies, and the energy threshold for the transition from spontaneous Raman scattering to SRS. H2, CO2, and propene (C3H6) were used as test gases. Our results demonstrated that a single-beam pulsed pump combined with FERS provides an effective Raman enhancement technique for gas analysis. Furthermore, an energy threshold for SRS initiation was experimentally observed. The SRS-capable FERS system, utilizing a single-beam pulsed pump, shows great potential for analyzing complex gases such as propene, which is a volatile organic compound (VOC) gas, serving as a biomarker in human breath for lung cancer and other human diseases. This work contributes to the advancement of gas analysis and opens alternative avenues for exploring novel Raman enhancement techniques.
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Affiliation(s)
- Maryam Shirmohammad
- Department of Physics and Astronomy, University of British Columbia, 6224 Agricultural Road, Vancouver, BC V6T 1Z1, Canada;
- Imaging Unit, Integrative Oncology Department, BC Cancer Research Institute, Vancouver, BC V5Z 1L3, Canada;
| | - Michael A. Short
- Imaging Unit, Integrative Oncology Department, BC Cancer Research Institute, Vancouver, BC V5Z 1L3, Canada;
| | - Haishan Zeng
- Department of Physics and Astronomy, University of British Columbia, 6224 Agricultural Road, Vancouver, BC V6T 1Z1, Canada;
- Imaging Unit, Integrative Oncology Department, BC Cancer Research Institute, Vancouver, BC V5Z 1L3, Canada;
- Department of Dermatology and Skin Science, University of British Columbia, Vancouver, BC V5Z 4E8, Canada
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5
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Vanstraelen S, Jones DR, Rocco G. Breathprinting analysis and biomimetic sensor technology to detect lung cancer. J Thorac Cardiovasc Surg 2023; 166:357-361.e1. [PMID: 36997463 DOI: 10.1016/j.jtcvs.2023.02.029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/09/2023] [Revised: 02/15/2023] [Accepted: 02/28/2023] [Indexed: 03/11/2023]
Affiliation(s)
- Stijn Vanstraelen
- Thoracic Service, Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, NY
| | - David R Jones
- Thoracic Service, Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, NY; Fiona and Stanley Druckenmiller Center for Lung Cancer Research, Memorial Sloan Kettering Cancer Center, New York, NY
| | - Gaetano Rocco
- Thoracic Service, Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, NY; Fiona and Stanley Druckenmiller Center for Lung Cancer Research, Memorial Sloan Kettering Cancer Center, New York, NY.
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6
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Ito H, Uragami N, Miyazaki T, Shimamura Y, Ikeda H, Nishikawa Y, Onimaru M, Matsuo K, Isozaki M, Yang W, Issha K, Kimura S, Kawamura M, Yokoyama N, Kushima M, Inoue H. Determination of esophageal squamous cell carcinoma and gastric adenocarcinoma on raw tissue using Raman spectroscopy. World J Gastroenterol 2023; 29:3145-3156. [PMID: 37346148 PMCID: PMC10280800 DOI: 10.3748/wjg.v29.i20.3145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Revised: 04/10/2023] [Accepted: 04/27/2023] [Indexed: 05/26/2023] Open
Abstract
BACKGROUND Cancer detection is a global research focus, and novel, rapid, and label-free techniques are being developed for routine clinical practice. This has led to the development of new tools and techniques from the bench side to routine clinical practice. In this study, we present a method that uses Raman spectroscopy (RS) to detect cancer in unstained formalin-fixed, resected specimens of the esophagus and stomach. Our method can record a clear Raman-scattered light spectrum in these specimens, confirming that the Raman-scattered light spectrum changes because of the histological differences in the mucosal tissue.
AIM To evaluate the use of Raman-scattered light spectrum for detecting endoscop-ically resected specimens of esophageal squamous cell carcinoma (SCC) and gastric adenocarcinoma (AC).
METHODS We created a Raman device that is suitable for observing living tissues, and attempted to acquire Raman-scattered light spectra in endoscopically resected specimens of six esophageal tissues and 12 gastric tissues. We evaluated formalin-fixed tissues using this technique and captured shifts at multiple locations based on feasibility, ranging from six to 19 locations 200 microns apart in the vertical and horizontal directions. Furthermore, a correlation between the obtained Raman scattered light spectra and histopathological diagnosis was performed.
RESULTS We successfully obtained Raman scattered light spectra from all six esophageal and 12 gastric specimens. After data capture, the tissue specimens were sent for histopathological analysis for further processing because RS is a label-free methodology that does not cause tissue destruction or alterations. Based on data analysis of molecular-level substrates, we established cut-off values for the diagnosis of esophageal SCC and gastric AC. By analyzing specific Raman shifts, we developed an algorithm to identify the range of esophageal SCC and gastric AC with an accuracy close to that of histopathological diagnoses.
CONCLUSION Our technique provides qualitative information for real-time morphological diagnosis. However, further in vivo evaluations require an excitation light source with low human toxicity and large amounts of data for validation.
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Affiliation(s)
- Hiroaki Ito
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - Naoyuki Uragami
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | | | - Yuto Shimamura
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - Haruo Ikeda
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - Yohei Nishikawa
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - Manabu Onimaru
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - Kai Matsuo
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - Masayuki Isozaki
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - William Yang
- Bay Spec Inc., San Jose, CA 95131, United States
| | - Kenji Issha
- Fuji Technical Research Inc., Yokohama 220-6215, Japan
| | - Satoshi Kimura
- Department of Laboratory Medicine and Central Clinical Laboratory, Showa University Northern Yokohama Hospital, Yokohama 224-8503, Japan
| | - Machiko Kawamura
- Department of Hematology, Saitama Cancer Center, Inamachi 362-0806, Japan
| | - Noboru Yokoyama
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - Miki Kushima
- Department of Pathology, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
| | - Haruhiro Inoue
- Digestive Disease Center, Showa University Koto Toyosu Hospital, Tokyo 135-8577, Japan
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7
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Xie S, Zhao C, Shen J, Wei J, Liu H, Pan Y, Zhao Y, Zhu Y. Hierarchical Flower-like WO 3 Nanospheres Decorated with Bimetallic Au and Pd for Highly Sensitive and Selective Detection of 3-Hydroxy-2-butanone Biomarker. ACS Sens 2023; 8:728-738. [PMID: 36696471 DOI: 10.1021/acssensors.2c02257] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Listeria monocytogenes, which is abundant in environment, can lead to many kinds of serious illnesses and even death. Nowadays, indirectly detecting the metabolite biomarker of L. monocytogenes, 3-hydroxy-2-butanone, has been verified to be an effective way to evaluate the contamination of L. monocytogenes. However, this detection approach is still limited by sensitivity, selectivity, and ppb-level detection limit. Herein, low-cost and highly sensitive and selective 3-hydroxy-2-butanone sensors have been proposed based on the bimetallic AuPd decorated hierarchical flower-like WO3 nanospheres. Notably, the 1.0 wt % AuPd-WO3 based sensors displayed the highest sensitivity (Ra/Rg = 84 @ 1 ppm) at 250 °C. In addition, the sensors showed outstanding selectivity, rapid response/recovery (8/4 s @ 10 ppm), and low detection limit (100 ppb). Furthermore, the evaluation of L. monocytogenes with high sensitivity and specificity has been achieved using 1.0 wt % AuPd-WO3 based sensors. Such a marvelous sensing performance benefits from the synergistic effect of bimetallic AuPd nanoparticles, which lead to thicker electron depletion layer and increased adsorbed oxygen species. Meanwhile, the unique hierarchical nanostructure of the flower-like WO3 nanospheres benefits the gas-sensing performance. The AuPd-WO3 nanosphere-based sensors exhibit a particular and highly selective method to detect 3-hydroxy-2-butanone, foreseeing a feasible route for the rapid and nondestructive evaluation of foodborne pathogens.
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Affiliation(s)
- Siqi Xie
- College of Food Science and Technology, Laboratory of Quality & Safety Risk Assessment for Aquatic Products on Storage and Preservation (Shanghai), Ministry of Agriculture and Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation Shanghai Ocean University, Shanghai 201306, China
| | - Cheng Zhao
- College of Food Science and Technology, Laboratory of Quality & Safety Risk Assessment for Aquatic Products on Storage and Preservation (Shanghai), Ministry of Agriculture and Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation Shanghai Ocean University, Shanghai 201306, China
| | - Jiabin Shen
- College of Food Science and Technology, Laboratory of Quality & Safety Risk Assessment for Aquatic Products on Storage and Preservation (Shanghai), Ministry of Agriculture and Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation Shanghai Ocean University, Shanghai 201306, China
| | - Jing Wei
- Institute of Analytical Chemistry and Instrument for Life Science, The Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, Shaanxi 710049, China
| | - Haiquan Liu
- College of Food Science and Technology, Laboratory of Quality & Safety Risk Assessment for Aquatic Products on Storage and Preservation (Shanghai), Ministry of Agriculture and Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation Shanghai Ocean University, Shanghai 201306, China
| | - Yingjie Pan
- College of Food Science and Technology, Laboratory of Quality & Safety Risk Assessment for Aquatic Products on Storage and Preservation (Shanghai), Ministry of Agriculture and Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation Shanghai Ocean University, Shanghai 201306, China
| | - Yong Zhao
- College of Food Science and Technology, Laboratory of Quality & Safety Risk Assessment for Aquatic Products on Storage and Preservation (Shanghai), Ministry of Agriculture and Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation Shanghai Ocean University, Shanghai 201306, China
| | - Yongheng Zhu
- College of Food Science and Technology, Laboratory of Quality & Safety Risk Assessment for Aquatic Products on Storage and Preservation (Shanghai), Ministry of Agriculture and Shanghai Engineering Research Center of Aquatic-Product Processing & Preservation Shanghai Ocean University, Shanghai 201306, China
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8
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Jung H, Hwang J, Choe YS, Lee HS, Lee W. Highly Sensitive and Selective Detection of Hydrogen Using Pd-Coated SnO 2 Nanorod Arrays for Breath-Analyzer Applications. SENSORS 2022; 22:s22052056. [PMID: 35271202 PMCID: PMC8914855 DOI: 10.3390/s22052056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/04/2022] [Revised: 03/01/2022] [Accepted: 03/03/2022] [Indexed: 12/10/2022]
Abstract
We report a breath hydrogen analyzer based on Pd-coated SnO2 nanorods (Pd-SnO2 NRs) sensor integrated into a miniaturized gas chromatography (GC) column. The device can measure a wide range of hydrogen (1–100 ppm), within 100 s, using a small volume of human breath (1 mL) without pre-concentration. Especially, the mini-GC integrated with Pd-SnO2 NRs can detect 1 ppm of H2, as a lower detection limit, at a low operating temperature of 152 °C. Furthermore, when the breath hydrogen analyzer was exposed to a mixture of interfering gases, such as carbon dioxide, nitrogen, methane, and acetone, it was found to be capable of selectively detecting only H2. We found that the Pd-SnO2 NRs were superior to other semiconducting metal oxides that lack selectivity in H2 detection. Our study reveals that the Pd-SnO2 NRs integrated into the mini-GC device can be utilized in breath hydrogen analyzers to rapidly and accurately detect hydrogen due to its high selectivity and sensitivity.
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Affiliation(s)
- Hwaebong Jung
- Department of Materials Science and Engineering, Yonsei University, 50 Yonseiro, Seodaemun-gu, Seoul 03722, Korea; (H.J.); (J.H.)
| | - Junho Hwang
- Department of Materials Science and Engineering, Yonsei University, 50 Yonseiro, Seodaemun-gu, Seoul 03722, Korea; (H.J.); (J.H.)
| | - Yong-Sahm Choe
- Isenlab Inc., Halla Sigma Valley, Dunchon-daero 545, Jungwon-gu, Seongnam-si 13215, Korea;
| | - Hyun-Sook Lee
- Department of Materials Science and Engineering, Yonsei University, 50 Yonseiro, Seodaemun-gu, Seoul 03722, Korea; (H.J.); (J.H.)
- Correspondence: (H.-S.L.); (W.L.)
| | - Wooyoung Lee
- Department of Materials Science and Engineering, Yonsei University, 50 Yonseiro, Seodaemun-gu, Seoul 03722, Korea; (H.J.); (J.H.)
- Correspondence: (H.-S.L.); (W.L.)
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9
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Cialla-May D, Krafft C, Rösch P, Deckert-Gaudig T, Frosch T, Jahn IJ, Pahlow S, Stiebing C, Meyer-Zedler T, Bocklitz T, Schie I, Deckert V, Popp J. Raman Spectroscopy and Imaging in Bioanalytics. Anal Chem 2021; 94:86-119. [PMID: 34920669 DOI: 10.1021/acs.analchem.1c03235] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Dana Cialla-May
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany.,InfectoGnostics Research Campus Jena, Center of Applied Research, Philosophenweg 7, 07743 Jena, Germany
| | - Christoph Krafft
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany
| | - Petra Rösch
- Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
| | - Tanja Deckert-Gaudig
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
| | - Torsten Frosch
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
| | - Izabella J Jahn
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
| | - Susanne Pahlow
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany.,InfectoGnostics Research Campus Jena, Center of Applied Research, Philosophenweg 7, 07743 Jena, Germany
| | - Clara Stiebing
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany
| | - Tobias Meyer-Zedler
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
| | - Thomas Bocklitz
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
| | - Iwan Schie
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Ernst-Abbe-Hochschule Jena, University of Applied Sciences, Department of Biomedical Engineering and Biotechnology, Carl-Zeiss-Promenade 2, 07745 Jena, Germany
| | - Volker Deckert
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany
| | - Jürgen Popp
- Leibniz-Institute of Photonic Technology, Member of the Leibniz Research Alliance - Leibniz Health Technologies, Albert-Einstein-Str. 9, 07745 Jena, Germany.,Institute of Physical Chemistry and Abbe Center of Photonics, Friedrich Schiller University, Helmholtzweg 4, 07743 Jena, Germany.,InfectoGnostics Research Campus Jena, Center of Applied Research, Philosophenweg 7, 07743 Jena, Germany
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10
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Knebl A, Domes C, Domes R, Wolf S, Popp J, Frosch T. Hydrogen and C2-C6 Alkane Sensing in Complex Fuel Gas Mixtures with Fiber-Enhanced Raman Spectroscopy. Anal Chem 2021; 93:10546-10552. [PMID: 34297525 DOI: 10.1021/acs.analchem.1c01500] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Power-to-gas is a heavily discussed option to store surplus electricity from renewable sources. Part of the generated hydrogen could be fed into the gas grid and lead to fluctuations in the composition of the fuel gas. Consequently, both operators of transmission networks and end users would need to frequently monitor the gas to ensure safety as well as optimal and stable operation. Currently, gas chromatography-based analysis methods are the state of the art. However, these methods have several downsides for time-resolved and distributed application and Raman gas spectroscopy is favorable for future point-of-use monitoring. Here, we demonstrate that fiber-enhanced Raman gas spectroscopy (FERS) enables the simultaneous detection of all relevant gases, from major (methane, CH4; hydrogen, H2) to minor (C2-C6 alkanes) fuel gas components. The characteristic peaks of H2 (585 cm-1), CH4 (2917 cm-1), isopentane (765 cm-1), i-butane (798 cm-1), n-butane (830 cm-1), n-pentane (840 cm-1), propane (869 cm-1), ethane (993 cm-1), and n-hexane (1038 cm-1) are well resolved in the broadband spectra acquired with a compact spectrometer. The fiber enhancement achieved in a hollow-core antiresonant fiber enables highly sensitive measurements with limits of detection between 90 and 180 ppm for different hydrocarbons. Both methane and hydrogen were quantified with high accuracy with average relative errors of 1.1% for CH4 and 1.5% for H2 over a wide concentration range. These results show that FERS is ideally suited for comprehensive fuel gas analysis in a future, where regenerative sources lead to fluctuations in the composition of gas.
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Affiliation(s)
- Andreas Knebl
- Leibniz Institute of Photonic Technology Jena, Albert Einstein Strasse 9, Jena 07745, Germany
| | - Christian Domes
- Leibniz Institute of Photonic Technology Jena, Albert Einstein Strasse 9, Jena 07745, Germany
| | - Robert Domes
- Leibniz Institute of Photonic Technology Jena, Albert Einstein Strasse 9, Jena 07745, Germany
| | - Sebastian Wolf
- Leibniz Institute of Photonic Technology Jena, Albert Einstein Strasse 9, Jena 07745, Germany
| | - Juergen Popp
- Leibniz Institute of Photonic Technology Jena, Albert Einstein Strasse 9, Jena 07745, Germany.,Institute of Physical Chemistry & Abbe Center of Photonics, Friedrich Schiller University, Jena 07745, Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology Jena, Albert Einstein Strasse 9, Jena 07745, Germany.,Institute of Physical Chemistry & Abbe Center of Photonics, Friedrich Schiller University, Jena 07745, Germany.,Biophotonics and Biomedical Engineering Group, Technical University Darmstadt, Merckstraße 25, Darmstadt 64283, Germany
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11
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Knebl A, Domes R, Wolf S, Domes C, Popp J, Frosch T. Fiber-Enhanced Raman Gas Spectroscopy for the Study of Microbial Methanogenesis. Anal Chem 2020; 92:12564-12571. [PMID: 32845132 DOI: 10.1021/acs.analchem.0c02507] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Microbial methanogenesis is a key biogeochemical process in the carbon cycle that is responsible for 70% of global emissions of the potent greenhouse gas methane (CH4). Further knowledge about microbial methanogenesis is crucial to mitigate emissions, increase climate model accuracy, or advance methanogenic biogas production. The current understanding of the substrate use of methanogenic microbes is limited, especially regarding the methylotrophic pathway. Here, we present fiber-enhanced Raman spectroscopy (FERS) of headspace gases as an alternate tool to study methanogenesis and substrate use in particular. The optical technique is nondestructive and sensitive to CH4, hydrogen (H2), and carbon dioxide with a large dynamic range from trace levels (demonstrated LoDs: CH4, 3 ppm; H2, 49 ppm) to pure gases. In addition, the portable FERS system can provide quantitative information about methanol concentration in the liquid phase of microbial cultures through headspace gas sampling (LoD 25 ppm). We demonstrate how FERS gas sensing could enable us to track substrate and product levels of microbial methanogenesis with just one instrument. The versatility of Raman gas spectroscopy could moreover help us to elucidate links between nitrogen and carbon cycle in microbial communities in the near future.
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Affiliation(s)
- Andreas Knebl
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Robert Domes
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Sebastian Wolf
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Christian Domes
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Juergen Popp
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany.,Friedrich Schiller University, Institute of Physical Chemistry, 07743 Jena, Germany.,Friedrich Schiller University, Abbe Center of Photonics, 07745 Jena, Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany.,Friedrich Schiller University, Institute of Physical Chemistry, 07743 Jena, Germany.,Friedrich Schiller University, Abbe Center of Photonics, 07745 Jena, Germany
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12
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Selvaraj R, Vasa NJ, Nagendra SMS, Mizaikoff B. Advances in Mid-Infrared Spectroscopy-Based Sensing Techniques for Exhaled Breath Diagnostics. Molecules 2020; 25:molecules25092227. [PMID: 32397389 PMCID: PMC7249025 DOI: 10.3390/molecules25092227] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2020] [Revised: 04/28/2020] [Accepted: 04/29/2020] [Indexed: 01/05/2023] Open
Abstract
Human exhaled breath consists of more than 3000 volatile organic compounds, many of which are relevant biomarkers for various diseases. Although gas chromatography has been the gold standard for volatile organic compound (VOC) detection in exhaled breath, recent developments in mid-infrared (MIR) laser spectroscopy have led to the promise of compact point-of-care (POC) optical instruments enabling even single breath diagnostics. In this review, we discuss the evolution of MIR sensing technologies with a special focus on photoacoustic spectroscopy, and its application in exhaled breath biomarker detection. While mid-infrared point-of-care instrumentation promises high sensitivity and inherent molecular selectivity, the lack of standardization of the various techniques has to be overcome for translating these techniques into more widespread real-time clinical use.
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Affiliation(s)
- Ramya Selvaraj
- Department of Engineering Design, Indian Institute of Technology Madras, Chennai 600036, India;
- Correspondence:
| | - Nilesh J. Vasa
- Department of Engineering Design, Indian Institute of Technology Madras, Chennai 600036, India;
| | - S. M. Shiva Nagendra
- Department of Civil Engineering, Indian Institute of Technology Madras, Chennai 600036, India;
| | - Boris Mizaikoff
- Institute of Analytical and Bioanalytical Chemistry, Ulm University, 89081 Ulm, Germany;
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13
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Rapid Raman Spectroscopic Analysis of Stress Induced Degradation of the Pharmaceutical Drug Tetracycline. Molecules 2020; 25:molecules25081866. [PMID: 32316681 PMCID: PMC7221697 DOI: 10.3390/molecules25081866] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Revised: 04/07/2020] [Accepted: 04/08/2020] [Indexed: 12/14/2022] Open
Abstract
Stress factors caused by inadequate storage can induce the unwanted degradation of active compounds in pharmaceutical formulations. Resonance Raman spectroscopy is presented as an analytical tool for rapid monitoring of small concentration changes of tetracycline and the metabolite 4˗epianhydrotetracycline. These degradation processes were experimentally induced by changes in temperature, humidity, and irradiation with visible light over a time period of up to 23 days. The excitation wavelength λexc = 413 nm was proven to provide short acquisition times for the simultaneous Raman spectroscopic detection of the degradation of tetracycline and production of its impurity in small sample volumes. Small concentration changes could be detected (down to 1.4% for tetracycline and 0.3% for 4-epianhydrotetracycline), which shows the potential of resonance Raman spectroscopy for analyzing the decomposition of pharmaceutical products.
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14
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Petrov DV, Kostenko MA, Shcherbakov AA. Silver holographic gratings as substrates for surface-enhanced Raman scattering gas analysis. APPLIED OPTICS 2020; 59:2929-2934. [PMID: 32225843 DOI: 10.1364/ao.386897] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/27/2019] [Accepted: 02/21/2020] [Indexed: 06/10/2023]
Abstract
This work is devoted to the investigation of the enhancement of Raman signals of nonadsorbed gases in the vicinity of corrugated metallic surfaces supporting propagating surface plasmon-polaritons (PSPPs). Simulation of the PSPP excitation efficiency on holographic gratings coated with silver films of various thicknesses at different groove heights was carried out. Verification showed good agreement between theory and experiment. Also, it was found that an increase of the PSPP excitation efficiency may not lead to an increase in the enhancement factor of Raman signals of gases located near the surface-enhanced Raman scattering active surface. For a holographic grating with a period of 667 nm, a groove height of 70 nm, and a silver film thickness of 30 nm coated with a protective ${{\rm Al}_2}{{\rm O}_3}$Al2O3 layer, the enhancement factor of Raman signals of nonadsorbed nitrogen molecules was $\sim{{\rm 4\cdot10}^3}$∼4⋅103.
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15
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Wolf S, Frosch T, Popp J, Pletz MW, Frosch T. Highly Sensitive Detection of the Antibiotic Ciprofloxacin by Means of Fiber Enhanced Raman Spectroscopy. Molecules 2019; 24:molecules24244512. [PMID: 31835489 PMCID: PMC6943513 DOI: 10.3390/molecules24244512] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2019] [Revised: 12/05/2019] [Accepted: 12/06/2019] [Indexed: 12/13/2022] Open
Abstract
Sepsis and septic shock exhibit a rapid course and a high fatality rate. Antibiotic treatment is time-critical and precise knowledge of the antibiotic concentration during the patients’ treatment would allow individual dose adaption. Over- and underdosing will increase the antimicrobial efficacy and reduce toxicity. We demonstrated that fiber enhanced Raman spectroscopy (FERS) can be used to detect very low concentrations of ciprofloxacin in clinically relevant doses, down to 1.5 µM. Fiber enhancement was achieved in bandgap shifted photonic crystal fibers. The high linearity between the Raman signals and the drug concentrations allows a robust calibration for drug quantification. The needed sample volume was very low (0.58 µL) and an acquisition time of 30 s allowed the rapid monitoring of ciprofloxacin levels in a less invasive way than conventional techniques. These results demonstrate that FERS has a high potential for clinical in-situ monitoring of ciprofloxacin levels.
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Affiliation(s)
- Sebastian Wolf
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Timea Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Juergen Popp
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
- Institute of Physical Chemistry, Friedrich Schiller University, 07743 Jena, Germany
- Abbe Center of Photonics, Friedrich Schiller University, 07745 Jena, Germany
| | - Mathias W. Pletz
- Institute of Infectious Diseases and Infection Control, University Hospital, 07747 Jena, Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
- Institute of Physical Chemistry, Friedrich Schiller University, 07743 Jena, Germany
- Abbe Center of Photonics, Friedrich Schiller University, 07745 Jena, Germany
- Correspondence: or
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16
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Frosch T, Wyrwich E, Yan D, Popp J, Frosch T. Fiber-Array-Based Raman Hyperspectral Imaging for Simultaneous, Chemically-Selective Monitoring of Particle Size and Shape of Active Ingredients in Analgesic Tablets. Molecules 2019; 24:E4381. [PMID: 31801249 PMCID: PMC6930444 DOI: 10.3390/molecules24234381] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2019] [Revised: 11/17/2019] [Accepted: 11/28/2019] [Indexed: 11/20/2022] Open
Abstract
The particle shape, size and distribution of active pharmaceutical ingredients (API) are relevant quality indicators of pharmaceutical tablets due to their high impact on the manufacturing process. Furthermore, the bioavailability of the APIs from the dosage form depends largely on these characteristics. Routinely, particle size and shape are only analyzed in the powder form, without regard to the effect of the formulation procedure on the particle characteristics. The monitoring of these parameters improves the understanding of the process; therefore, higher quality and better control over the biopharmaceutical profile can be ensured. A new fiber-array-based Raman hyperspectral imaging technique is presented for direct simultaneous in-situ monitoring of three different active pharmaceutical ingredients- acetylsalicylic acid, acetaminophen and caffeine- in analgesic tablets. This novel method enables a chemically selective, noninvasive assessment of the distribution of the active ingredients down to 1 µm spatial resolution. The occurrence of spherical and needle-like particles, as well as agglomerations and the respective particle size ranges, were rapidly determined for two commercially available analgesic tablet types. Subtle differences were observed in comparison between these two tablets. Higher amounts of acetaminophen were visible, more needle-shaped and bigger acetylsalicylic acid particles, and a higher incidence of bigger agglomerations were found in one of the analgesic tablets.
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Affiliation(s)
- Timea Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany; (T.F.); (E.W.); (D.Y.); (J.P.)
| | - Elisabeth Wyrwich
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany; (T.F.); (E.W.); (D.Y.); (J.P.)
| | - Di Yan
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany; (T.F.); (E.W.); (D.Y.); (J.P.)
| | - Juergen Popp
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany; (T.F.); (E.W.); (D.Y.); (J.P.)
- Institute of Physical Chemistry, Friedrich Schiller University, 07743 Jena, Germany
- Abbe Centre of Photonics, Friedrich Schiller University, 07745 code Jena, Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany; (T.F.); (E.W.); (D.Y.); (J.P.)
- Institute of Physical Chemistry, Friedrich Schiller University, 07743 Jena, Germany
- Abbe Centre of Photonics, Friedrich Schiller University, 07745 code Jena, Germany
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17
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Le VH, Caumon MC, Tarantola A, Randi A, Robert P, Mullis J. Quantitative Measurements of Composition, Pressure, and Density of Microvolumes of CO2–N2 Gas Mixtures by Raman Spectroscopy. Anal Chem 2019; 91:14359-14367. [DOI: 10.1021/acs.analchem.9b02803] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Van-Hoan Le
- Université de Lorraine, CNRS, GeoResssources Laboratory, BP 70239, F-54506 Vandoeuvre-lès-Nancy, France
| | - Marie-Camille Caumon
- Université de Lorraine, CNRS, GeoResssources Laboratory, BP 70239, F-54506 Vandoeuvre-lès-Nancy, France
| | - Alexandre Tarantola
- Université de Lorraine, CNRS, GeoResssources Laboratory, BP 70239, F-54506 Vandoeuvre-lès-Nancy, France
| | - Aurélien Randi
- Université de Lorraine, CNRS, GeoResssources Laboratory, BP 70239, F-54506 Vandoeuvre-lès-Nancy, France
| | - Pascal Robert
- Université de Lorraine, CNRS, GeoResssources Laboratory, BP 70239, F-54506 Vandoeuvre-lès-Nancy, France
| | - Josef Mullis
- Mineralogisch-Petrographisches Institut, Bernoullistrasse 30, CH-4056 Basel, Switzerland
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18
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Sieburg A, Knebl A, Jacob JM, Frosch T. Characterization of fuel gases with fiber-enhanced Raman spectroscopy. Anal Bioanal Chem 2019; 411:7399-7408. [DOI: 10.1007/s00216-019-02145-x] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2019] [Revised: 08/19/2019] [Accepted: 09/06/2019] [Indexed: 12/15/2022]
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19
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Frosch T, Wyrwich E, Yan D, Domes C, Domes R, Popp J, Frosch T. Counterfeit and Substandard Test of the Antimalarial Tablet Riamet ® by Means of Raman Hyperspectral Multicomponent Analysis. Molecules 2019; 24:molecules24183229. [PMID: 31491881 PMCID: PMC6767462 DOI: 10.3390/molecules24183229] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2019] [Revised: 08/31/2019] [Accepted: 09/02/2019] [Indexed: 02/06/2023] Open
Abstract
The fight against counterfeit pharmaceuticals is a global issue of utmost importance, as failed medication results in millions of deaths every year. Particularly affected are antimalarial tablets. A very important issue is the identification of substandard tablets that do not contain the nominal amounts of the active pharmaceutical ingredient (API), and the differentiation between genuine products and products without any active ingredient or with a false active ingredient. This work presents a novel approach based on fiber-array based Raman hyperspectral imaging to qualify and quantify the antimalarial APIs lumefantrine and artemether directly and non-invasively in a tablet in a time-efficient way. The investigations were carried out with the antimalarial tablet Riamet® and self-made model tablets, which were used as examples of counterfeits and substandard. Partial least-squares regression modeling and density functional theory calculations were carried out for quantification of lumefantrine and artemether and for spectral band assignment. The most prominent differentiating vibrational signatures of the APIs were presented.
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Affiliation(s)
- Timea Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | | | - Di Yan
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Christian Domes
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Robert Domes
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Juergen Popp
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
- Friedrich Schiller University, Institute of Physical Chemistry, 07745 Jena, Germany
- Friedrich Schiller University, Abbe Centre of Photonics, 07745 Jena, Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany.
- Friedrich Schiller University, Institute of Physical Chemistry, 07745 Jena, Germany.
- Friedrich Schiller University, Abbe Centre of Photonics, 07745 Jena, Germany.
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20
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Knebl A, Domes R, Yan D, Popp J, Trumbore S, Frosch T. Fiber-Enhanced Raman Gas Spectroscopy for 18O- 13C-Labeling Experiments. Anal Chem 2019; 91:7562-7569. [PMID: 31050402 DOI: 10.1021/acs.analchem.8b05684] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
Stable isotopes are used in ecology to track and disentangle different processes and pathways. Especially for studies focused on the gas exchange of plants, sensing techniques that offer oxygen (O2) and carbon dioxide (CO2) sensitivity with isotopic discrimination are highly sought after. Addressing this challenge, fiber-enhanced Raman gas spectroscopy is introduced as a fast optical technique directly combining 13CO2 and 12CO2 as well as 18O2 and 16O2 measurements in one instrument. We demonstrate how a new type of optical hollow-core fiber, the so-called revolver fiber, is utilized for enhanced Raman gas sensing. Carbon dioxide and oxygen isotopologues were measured at concentrations expected when using 13C- and 18O-labeled gases in plant experiments. Limits of detection have been determined to be 25 ppm for CO2 and 150 ppm for O2. The combination of measurements with different integration times allows the creation of highly resolved broadband spectra. With the help of calculations based on density functional theory, the line at 1512 cm-1 occurring in the oxygen spectrum is assigned to 18O16O. The relative abundances of the isotopologues 18O16O and nitrogen 15N14N were in good agreement with typical values. For CO2, fiber-enhanced Raman spectra show the Fermi diad and hotbands of 12C16O2, 13C16O2, and 12C18O16O. Several weak lines were observed, and the line at 1426 cm-1 was identified as originating from the (0 4 0 2) → (0 2 0 2) transition of 12C16O2. With the demonstrated sensitivity and discriminatory power, fiber-enhanced Raman spectroscopy is a possible alternative means to investigate plant metabolism, directly combining 13CO2 and 12CO2 measurements with 18O2 and 16O2 measurements in one instrument. The presented method thus has large potential for basic analytical investigations as well as for applications in the environmental sciences.
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Affiliation(s)
- Andreas Knebl
- Leibniz Institute of Photonic Technology , 07745 Jena , Germany.,Max-Planck-Institute for Biogeochemistry , 07745 Jena , Germany
| | - Robert Domes
- Leibniz Institute of Photonic Technology , 07745 Jena , Germany
| | - Di Yan
- Leibniz Institute of Photonic Technology , 07745 Jena , Germany
| | - Juergen Popp
- Leibniz Institute of Photonic Technology , 07745 Jena , Germany.,Institute of Physical Chemistry & Abbe Center of Photonics , Friedrich Schiller University , 07743 Jena , Germany
| | - Susan Trumbore
- Max-Planck-Institute for Biogeochemistry , 07745 Jena , Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology , 07745 Jena , Germany.,Institute of Physical Chemistry & Abbe Center of Photonics , Friedrich Schiller University , 07743 Jena , Germany
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21
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Yan D, Frosch T, Kobelke J, Bierlich J, Popp J, Pletz MW, Frosch T. Fiber-Enhanced Raman Sensing of Cefuroxime in Human Urine. Anal Chem 2018; 90:13243-13248. [PMID: 30387601 DOI: 10.1021/acs.analchem.8b01355] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
Fiber-enhanced Raman spectroscopy was developed for the chemically selective and sensitive quantification of the important antibiotic cefuroxime in human urine. A novel optical sensor fiber was drawn and precisely prepared. In this fiber structure, light is strongly confined in the selectively filled liquid core, and the Raman scattered signal is collected with unprecedented efficiency over an extended interaction length. The filling, emptying, and robustness are highly improved due to the large core size (>30 μm). Broadband step-index guidance allows the free choice of the most suitable excitation wavelength in complex body fluids. The limit of detection of cefuroxime in human urine was improved by 2 orders of magnitude (to μM level). The quantification of cefuroxime was achieved in urine after oral administration. This method has great potential for the point-of-care monitoring of antibiotics concentrations and is an important step forward to enable clinicians to rapidly adjust doses.
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Affiliation(s)
- Di Yan
- Leibniz Institute of Photonic Technology , Jena 07745 , Germany
| | - Timea Frosch
- Leibniz Institute of Photonic Technology , Jena 07745 , Germany
| | - Jens Kobelke
- Leibniz Institute of Photonic Technology , Jena 07745 , Germany
| | - Jörg Bierlich
- Leibniz Institute of Photonic Technology , Jena 07745 , Germany
| | - Jürgen Popp
- Leibniz Institute of Photonic Technology , Jena 07745 , Germany.,Friedrich Schiller University , Institute of Physical Chemistry , Jena 07743 , Germany.,Friedrich Schiller University , Abbe Centre of Photonics , Jena 07745 , Germany
| | - Mathias W Pletz
- Center for Infectious Diseases and Infection Control , Jena University Hospital , Jena 07740 , Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology , Jena 07745 , Germany.,Friedrich Schiller University , Institute of Physical Chemistry , Jena 07743 , Germany.,Friedrich Schiller University , Abbe Centre of Photonics , Jena 07745 , Germany
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22
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Sieburg A, Jochum T, Trumbore SE, Popp J, Frosch T. Onsite cavity enhanced Raman spectrometry for the investigation of gas exchange processes in the Earth's critical zone. Analyst 2018; 142:3360-3369. [PMID: 28853462 DOI: 10.1039/c7an01149k] [Citation(s) in RCA: 30] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Raman gas spectrometry is introduced as a robust, versatile method for onsite, battery-powered field measurements of gases in the unsaturated and saturated critical zone. In this study, depth-profiles of the concentrations of oxygen and carbon dioxide were simultaneously monitored down to ∼70 meters depth in the subsurface via a transect of drilling holes located in the Hainich Critical Zone Exploratory in central Germany. A special multichannel monitoring system was designed to access and analyze these gases non-consumptively onsite in a closed loop measurement cycle. During the timeframe of six months, seasonal changes in groundwater levels and microbial activity were related to changes observed in gas concentrations. High oxygen concentrations were found in the depths surrounding a karstified aquifer complex, while low oxygen concentrations were found in a fractured aquifer complex. Raman gas depth-profiles complement standard dissolved oxygen measurements as they also deliver oxygen concentrations in the unsaturated zone. The measured depth-profiles of the gas concentrations indicated that regions of anoxia can exist between the aquifer complexes. Lateral transport of O2 in the deeper aquifer complex provides a local source of O2 that can influence metabolism. Correlations were found between the observed CO2 concentrations and pH-values, indicating strong control of carbonate equilibria. The concentrations of O2 and CO2 were largely decoupled, thus simultaneous measurements of O2 soil effluxes give additional insights into biotic and abiotic processes in the Hainich CZE. These results illustrate the versatility of robust onsite Raman multigas measurements of the soil atmosphere and how they can contribute to the analysis of complex processes in previous uncharacterized environments in the critical zone.
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Affiliation(s)
- Anne Sieburg
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany.
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23
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24
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Sieburg A, Schneider S, Yan D, Popp J, Frosch T. Monitoring of gas composition in a laboratory biogas plant using cavity enhanced Raman spectroscopy. Analyst 2018; 143:1358-1366. [DOI: 10.1039/c7an01689a] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Cavity-enhanced Raman spectroscopy is a powerful tool for online detection of multiple gases during the process of biogas production.
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Affiliation(s)
- Anne Sieburg
- Leibniz Institute of Photonic Technology
- 07745 Jena
- Germany
| | | | - Di Yan
- Leibniz Institute of Photonic Technology
- 07745 Jena
- Germany
| | - Jürgen Popp
- Leibniz Institute of Photonic Technology
- 07745 Jena
- Germany
- Friedrich Schiller University
- Institute of Physical Chemistry
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology
- 07745 Jena
- Germany
- Friedrich Schiller University
- Institute of Physical Chemistry
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25
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Yan D, Popp J, Frosch T. Analysis of Fiber-Enhanced Raman Gas Sensing Based on Raman Chemical Imaging. Anal Chem 2017; 89:12269-12275. [DOI: 10.1021/acs.analchem.7b03209] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Di Yan
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
| | - Jürgen Popp
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
- Friedrich Schiller University, Institute of Physical
Chemistry, 07743 Jena, Germany
- Friedrich Schiller University, Abbe Center of Photonics, 07745 Jena, Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany
- Friedrich Schiller University, Institute of Physical
Chemistry, 07743 Jena, Germany
- Friedrich Schiller University, Abbe Center of Photonics, 07745 Jena, Germany
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26
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Domes C, Domes R, Popp J, Pletz MW, Frosch T. Ultrasensitive Detection of Antiseptic Antibiotics in Aqueous Media and Human Urine Using Deep UV Resonance Raman Spectroscopy. Anal Chem 2017; 89:9997-10003. [PMID: 28840713 DOI: 10.1021/acs.analchem.7b02422] [Citation(s) in RCA: 30] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
Deep UV resonance Raman spectroscopy is introduced as an analytical tool for ultrasensitive analysis of antibiotics used for empirical treatment of patients with sepsis and septic shock, that is, moxifloxacin, meropenem, and piperacillin in aqueous solution and human urine. By employing the resonant excitation wavelengths λexc = 244 nm and λexc = 257 nm, only a small sample volume and short acquisition times are needed. For a better characterization of the matrix urine, the main ingredients were investigated. The capability of detecting the antibiotics in clinically relevant concentrations in aqueous media (LODs: 13.0 ± 1.4 μM for moxifloxacin, 43.6 ± 10.7 μM for meropenem, and 7.1 ± 0.6 μM for piperacillin) and in urine (LODs: 36.6 ± 11.0 μM for moxifloxacin, and 114.8 ± 3.1 μM for piperacillin) points toward the potential of UV Raman spectroscopy as point-of-care method for therapeutic drug monitoring (TDM). This procedure enables physicians to achieve fast adequate dosing of antibiotics to improve the outcome of patients with sepsis.
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Affiliation(s)
- Christian Domes
- Leibniz Institute of Photonic Technology , Jena 07745, Germany
| | - Robert Domes
- Leibniz Institute of Photonic Technology , Jena 07745, Germany
| | - Jürgen Popp
- Leibniz Institute of Photonic Technology , Jena 07745, Germany.,Friedrich Schiller University , Institute for Physical Chemistry, Jena 07743, Germany.,Friedrich Schiller University , Abbe Centre of Photonics, Jena 07745, Germany
| | - Mathias W Pletz
- Center for Infectious Diseases and Infection Control, Jena University Hospital , Jena 07743, Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology , Jena 07745, Germany.,Friedrich Schiller University , Institute for Physical Chemistry, Jena 07743, Germany.,Friedrich Schiller University , Abbe Centre of Photonics, Jena 07745, Germany
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27
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Domes R, Domes C, Albert CR, Bringmann G, Popp J, Frosch T. Vibrational spectroscopic characterization of arylisoquinolines by means of Raman spectroscopy and density functional theory calculations. Phys Chem Chem Phys 2017; 19:29918-29926. [DOI: 10.1039/c7cp05415g] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Seven new AIQ antimalarial agents were investigated using FT-NIR and deep-UV resonance Raman spectroscopy.
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Affiliation(s)
- Robert Domes
- Leibniz Institute of Photonic Technology
- Jena
- Germany
| | | | | | - Gerhard Bringmann
- Julius-Maximilians University
- Institute of Organic Chemistry
- Würzburg
- Germany
| | - Jürgen Popp
- Leibniz Institute of Photonic Technology
- Jena
- Germany
- Friedrich Schiller University
- Institute for Physical Chemistry
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology
- Jena
- Germany
- Friedrich Schiller University
- Institute for Physical Chemistry
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28
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Petrov DV. Multipass optical system for a Raman gas spectrometer. APPLIED OPTICS 2016; 55:9521-9525. [PMID: 27869865 DOI: 10.1364/ao.55.009521] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
In the present work, a multipass optical system intended for increasing the sensitivity of a Raman gas spectrometer based on the 90° geometry of scattered light collection is described. The system is characterized by an adjustment stability and an increased number of laser beams that pass through a small scattering volume, thus allowing the intensities of Raman signals from components of the gas medium in this volume to be increased. It is demonstrated that the application of this multipass optical system allows the sensitivity of the Raman gas spectrometer to be increased practically by 20 times (to several ppm for the 30-s registration time).
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29
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Kim SJ, Choi SJ, Jang JS, Kim NH, Hakim M, Tuller HL, Kim ID. Mesoporous WO3 Nanofibers with Protein-Templated Nanoscale Catalysts for Detection of Trace Biomarkers in Exhaled Breath. ACS NANO 2016; 10:5891-5899. [PMID: 27166639 DOI: 10.1021/acsnano.6b01196] [Citation(s) in RCA: 95] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Highly selective detection, rapid response (<20 s), and superior sensitivity (Rair/Rgas> 50) against specific target gases, particularly at the 1 ppm level, still remain considerable challenges in gas sensor applications. We propose a rational design and facile synthesis concept for achieving exceptionally sensitive and selective detection of trace target biomarkers in exhaled human breath using a protein nanocage templating route for sensitizing electrospun nanofibers (NFs). The mesoporous WO3 NFs, functionalized with well-dispersed nanoscale Pt, Pd, and Rh catalytic nanoparticles (NPs), exhibit excellent sensing performance, even at parts per billion level concentrations of gases in a humid atmosphere. Functionalized WO3 NFs with nanoscale catalysts are demonstrated to show great promise for the reliable diagnosis of diseases.
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Affiliation(s)
| | | | | | | | - Meggie Hakim
- Platforms Engineering Group, Intel GmbH , Munich 85622, Germany
| | - Harry L Tuller
- Department of Materials Science and Engineering, Massachusetts Institute of Technology , Cambridge, Massachusetts 02139, United States
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30
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Brückner M, Becker K, Popp J, Frosch T. Fiber array based hyperspectral Raman imaging for chemical selective analysis of malaria-infected red blood cells. Anal Chim Acta 2015; 894:76-84. [PMID: 26423630 DOI: 10.1016/j.aca.2015.08.025] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2015] [Revised: 08/08/2015] [Accepted: 08/13/2015] [Indexed: 10/23/2022]
Abstract
A new setup for Raman spectroscopic wide-field imaging is presented. It combines the advantages of a fiber array based spectral translator with a tailor-made laser illumination system for high-quality Raman chemical imaging of sensitive biological samples. The Gaussian-like intensity distribution of the illuminating laser beam is shaped by a square-core optical multimode fiber to a top-hat profile with very homogeneous intensity distribution to fulfill the conditions of Koehler. The 30 m long optical fiber and an additional vibrator efficiently destroy the polarization and coherence of the illuminating light. This homogeneous, incoherent illumination is an essential prerequisite for stable quantitative imaging of complex biological samples. The fiber array translates the two-dimensional lateral information of the Raman stray light into separated spectral channels with very high contrast. The Raman image can be correlated with a corresponding white light microscopic image of the sample. The new setup enables simultaneous quantification of all Raman spectra across the whole spatial area with very good spectral resolution and thus outperforms other Raman imaging approaches based on scanning and tunable filters. The unique capabilities of the setup for fast, gentle, sensitive, and selective chemical imaging of biological samples were applied for automated hemozoin analysis. A special algorithm was developed to generate Raman images based on the hemozoin distribution in red blood cells without any influence from other Raman scattering. The new imaging setup in combination with the robust algorithm provides a novel, elegant way for chemical selective analysis of the malaria pigment hemozoin in early ring stages of Plasmodium falciparum infected erythrocytes.
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Affiliation(s)
| | - Katja Becker
- Justus Liebig University Giessen, Biochemistry and Molecular Biology, 35392 Giessen, Germany
| | - Jürgen Popp
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany; Friedrich Schiller University Jena, Institute for Physical Chemistry, 07745 Jena, Germany; Friedrich Schiller University Jena, Abbe Centre of Photonics, 07745 Jena, Germany
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology, 07745 Jena, Germany; Friedrich Schiller University Jena, Institute for Physical Chemistry, 07745 Jena, Germany; Friedrich Schiller University Jena, Abbe Centre of Photonics, 07745 Jena, Germany.
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31
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Hartung A, Kobelke J, Schwuchow A, Bierlich J, Popp J, Schmidt MA, Frosch T. Low-loss single-mode guidance in large-core antiresonant hollow-core fibers. OPTICS LETTERS 2015; 40:3432-3435. [PMID: 26176487 DOI: 10.1364/ol.40.003432] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
We present an approach how to combine large-mode field diameters with effective single-mode guidance in a hollow-core antiresonant optical fiber. We demonstrate experimentally and in simulations that single-mode guidance is achieved in a simplified hollow-core fiber design with a core diameter of 30 μm by shifting the effective indices of the first cladding modes close to those of higher order core modes. Our fiber shows low loss propagation and effective single-mode operation from the near infrared to deep ultraviolet wavelengths down to 270 nm on a loss level of approximately 3 dB/m.
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32
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Wojtas J. Application of Cavity Enhanced Absorption Spectroscopy to the Detection of Nitric Oxide, Carbonyl Sulphide, and Ethane--Breath Biomarkers of Serious Diseases. SENSORS 2015; 15:14356-69. [PMID: 26091398 PMCID: PMC4507679 DOI: 10.3390/s150614356] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/17/2015] [Revised: 06/01/2015] [Accepted: 06/11/2015] [Indexed: 02/03/2023]
Abstract
The paper presents one of the laser absorption spectroscopy techniques as an effective tool for sensitive analysis of trace gas species in human breath. Characterization of nitric oxide, carbonyl sulphide and ethane, and the selection of their absorption lines are described. Experiments with some biomarkers showed that detection of pathogenic changes at the molecular level is possible using this technique. Thanks to cavity enhanced spectroscopy application, detection limits at the ppb-level and short measurements time (<3 s) were achieved. Absorption lines of reference samples of the selected volatile biomarkers were probed using a distributed feedback quantum cascade laser and a tunable laser system consisting of an optical parametric oscillator and difference frequency generator. Setup using the first source provided a detection limit of 30 ppb for nitric oxide and 250 ppb for carbonyl sulphide. During experiments employing a second laser, detection limits of 0.9 ppb and 0.3 ppb were obtained for carbonyl sulphide and ethane, respectively. The conducted experiments show that this type of diagnosis would significantly increase chances for effective therapy of some diseases. Additionally, it offers non-invasive and real time measurements, high sensitivity and selectivity as well as minimizing discomfort for patients. For that reason, such sensors can be used in screening for early detection of serious diseases.
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Affiliation(s)
- Jacek Wojtas
- Institute of Optoelectronics, Military University of Technology, 2 Kaliskiego Str., Warsaw 00-908, Poland.
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Jochum T, Michalzik B, Bachmann A, Popp J, Frosch T. Microbial respiration and natural attenuation of benzene contaminated soils investigated by cavity enhanced Raman multi-gas spectroscopy. Analyst 2015; 140:3143-9. [PMID: 25751376 DOI: 10.1039/c5an00091b] [Citation(s) in RCA: 35] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Soil and groundwater contamination with benzene can cause serious environmental damage. However, many soil microorganisms are capable to adapt and are known to strongly control the fate of organic contamination. Innovative cavity enhanced Raman multi-gas spectroscopy (CERS) was applied to investigate the short-term response of the soil micro-flora to sudden surface contamination with benzene regarding the temporal variations of gas products and their exchange rates with the adjacent atmosphere. (13)C-labeled benzene was spiked on a silty-loamy soil column in order to track and separate the changes in heterotrophic soil respiration - involving (12)CO2 and O2- from the natural attenuation process of benzene degradation to ultimately form (13)CO2. The respiratory quotient (RQ) decreased from a value 0.98 to 0.46 directly after the spiking and increased again within 33 hours to a value of 0.72. This coincided with the maximum (13)CO2 concentration rate (0.63 μmol m(-2) s(-1)), indicating the highest benzene degradation at 33 hours after the spiking event. The diffusion of benzene in the headspace and the biodegradation into (13)CO2 were simultaneously monitored and 12 days after the benzene spiking no measurable degradation was detected anymore. The RQ finally returned to a value of 0.96 demonstrating the reestablished aerobic respiration.
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Affiliation(s)
- Tobias Jochum
- Leibniz Institute of Photonic Technology, Jena, Germany.
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Keiner R, Herrmann M, Küsel K, Popp J, Frosch T. Rapid monitoring of intermediate states and mass balance of nitrogen during denitrification by means of cavity enhanced Raman multi-gas sensing. Anal Chim Acta 2015; 864:39-47. [PMID: 25732425 DOI: 10.1016/j.aca.2015.02.007] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2014] [Revised: 01/29/2015] [Accepted: 02/05/2015] [Indexed: 11/18/2022]
Abstract
The comprehensive investigation of changes in N cycling has been challenging so far due to difficulties with measuring gases such as N2 and N2O simultaneously. In this study we introduce cavity enhanced Raman gas spectroscopy as a new analytical methodology for tracing the stepwise reduction of (15)N-labelled nitrate by the denitrifying bacteria Pseudomonas stutzeri. The unique capabilities of Raman multi-gas analysis enabled real-time, continuous, and non-consumptive quantification of the relevant gases ((14)N2, (14)N2O, O2, and CO2) and to trace the fate of (15)N-labeled nitrate substrate ((15)N2, (15)N2O) added to a P. stutzeri culture with one single measurement. Using this new methodology, we could quantify the kinetics of the formation and degradation for all gaseous compounds (educts and products) and thus study the reaction orders. The gas quantification was complemented with the analysis of nitrate and nitrite concentrations for the online monitoring of the total nitrogen element budget. The simultaneous quantification of all gases also enabled the contactless and sterile online acquisition of the pH changes in the P. stutzeri culture by the stoichiometry of the redox reactions during denitrification and the CO2-bicarbonate equilibrium. Continuous pH monitoring - without the need to insert an electrode into solution - elucidated e.g. an increase in the slope of the pH value coinciding with an accumulation of nitrite, which in turn led to a temporary accumulation of N2O, due to an inhibition of nitrous oxide reductase. Cavity enhanced Raman gas spectroscopy has a high potential for the assessment of denitrification processes and can contribute substantially to our understanding of nitrogen cycling in both natural and agricultural systems.
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Affiliation(s)
- Robert Keiner
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Jena 07743, Germany; Leibniz Institute of Photonic Technology, Jena 07745, Germany
| | - Martina Herrmann
- Institute of Ecology, Friedrich Schiller University Jena, Jena 07743, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig 04103, Germany
| | - Kirsten Küsel
- Institute of Ecology, Friedrich Schiller University Jena, Jena 07743, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Leipzig 04103, Germany
| | - Jürgen Popp
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Jena 07743, Germany; Leibniz Institute of Photonic Technology, Jena 07745, Germany; InfectoGnostics Forschungscampus, Zentrum für Angewandte Forschung, Jena 07743, Germany; Abbe School of Photonics, Friedrich Schiller University, Jena, Germany
| | - Torsten Frosch
- Institute of Physical Chemistry, Friedrich Schiller University Jena, Jena 07743, Germany; Leibniz Institute of Photonic Technology, Jena 07745, Germany; InfectoGnostics Forschungscampus, Zentrum für Angewandte Forschung, Jena 07743, Germany.
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35
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Hanf S, Fischer S, Hartmann H, Keiner R, Trumbore S, Popp J, Frosch T. Online investigation of respiratory quotients in Pinus sylvestris and Picea abies during drought and shading by means of cavity-enhanced Raman multi-gas spectrometry. Analyst 2015; 140:4473-81. [DOI: 10.1039/c5an00402k] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
CERS monitoring of RQ values enables the analysis of nutrition shifts in trees in response to environmental stress.
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Affiliation(s)
- Stefan Hanf
- Leibniz Institute of Photonic Technology
- Jena
- Germany
- Max Planck Institute for Biogeochemistry
- Jena
| | | | | | | | | | - Jürgen Popp
- Leibniz Institute of Photonic Technology
- Jena
- Germany
- Friedrich Schiller University
- Institute for Physical Chemistry
| | - Torsten Frosch
- Leibniz Institute of Photonic Technology
- Jena
- Germany
- Friedrich Schiller University
- Institute for Physical Chemistry
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