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Sharma S, Arpita K, Nirgude M, Srivastava H, Kumar K, Sreevathsa R, Bhattacharya R, Gaikwad K. Genomic insights into cytokinin oxidase/dehydrogenase (CKX) gene family, identification, phylogeny and synteny analysis for its possible role in regulating seed number in Pigeonpea (Cajanus cajan (L.) Millsp.). Int J Biol Macromol 2024; 277:134194. [PMID: 39097061 DOI: 10.1016/j.ijbiomac.2024.134194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2024] [Revised: 06/28/2024] [Accepted: 07/25/2024] [Indexed: 08/05/2024]
Abstract
Cytokinin oxidase/dehydrogenase (CKX) regulates cytokinin levels in plants which are vital for plant growth and development. However, there is a paucity of evidence regarding their role in controlling embryo/seed development in pigeonpea. This comprehensive study provides information on the identification and characterization of CKX genes in pigeonpea. A genome-wide analysis identified 18 CKX genes, each with distinct structure, expression patterns, and possible diverse functions. Domain analysis revealed the presence of the sequences including FAD and CK-Binding domain, and subcellular localization analysis showed that almost 50 % of them reside within the nucleus. They were observed to be located unevenly on chromosome numbers 2, 4, 6, 7, and 11 with a majority of them present on the scaffolds. The 8 homologous pairs and various orthologous gene pairs provided further insights into their evolution pattern. Further, SNP/Indels variation in CKX genes and haplotype groups among contrasting genotypes for SNPP (seed number per pod) were analyzed. Spatiotemporal expression analysis revealed the significant expression pattern of CcCKX15, CcCKX17, and CcCKX2 in genotypes carrying low SNPP reiterating their possible role as negative regulators. These genes can be potential targets to undertake seed and biomass improvement in pigeonpea.
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Affiliation(s)
- Sandhya Sharma
- ICAR-National Institute for Plant Biotechnology, New Delhi 110012, India
| | - Kumari Arpita
- ICAR-National Institute for Plant Biotechnology, New Delhi 110012, India
| | - Machindra Nirgude
- ICAR-National Institute for Plant Biotechnology, New Delhi 110012, India
| | - Harsha Srivastava
- ICAR-National Institute for Plant Biotechnology, New Delhi 110012, India
| | - Kuldeep Kumar
- ICAR-National Institute for Plant Biotechnology, New Delhi 110012, India
| | - Rohini Sreevathsa
- ICAR-National Institute for Plant Biotechnology, New Delhi 110012, India
| | | | - Kishor Gaikwad
- ICAR-National Institute for Plant Biotechnology, New Delhi 110012, India.
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Khoso MA, Wang M, Zhou Z, Huang Y, Li S, Zhang Y, Qian G, Ko SN, Pang Q, Liu C, Li L. Bacillus altitudinis AD13-4 Enhances Saline-Alkali Stress Tolerance of Alfalfa and Affects Composition of Rhizosphere Soil Microbial Community. Int J Mol Sci 2024; 25:5785. [PMID: 38891975 PMCID: PMC11171787 DOI: 10.3390/ijms25115785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2024] [Revised: 05/10/2024] [Accepted: 05/15/2024] [Indexed: 06/21/2024] Open
Abstract
Saline and alkaline stresses limit plant growth and reduce crop yield. Soil salinization and alkalization seriously threaten the sustainable development of agriculture and the virtuous cycle of ecology. Biofertilizers made from plant growth-promoting rhizobacteria (PGPR) not only enhance plant growth and stress tolerance, but also are environmentally friendly and cost-effective. There have been many studies on the mechanisms underlying PGPRs enhancing plant salt resistance. However, there is limited knowledge about the interaction between PGPR and plants under alkaline-sodic stress. To clarify the mechanisms underlying PGPR's improvement of plants' tolerance to alkaline-sodic stress, we screened PGPR from the rhizosphere microorganisms of local plants growing in alkaline-sodic land and selected an efficient strain, Bacillus altitudinis AD13-4, as the research object. Our results indicate that the strain AD13-4 can produce various growth-promoting substances to regulate plant endogenous hormone levels, cell division and differentiation, photosynthesis, antioxidant capacity, etc. Transcriptome analysis revealed that the strain AD13-4 significantly affected metabolism and secondary metabolism, signal transduction, photosynthesis, redox processes, and plant-pathogen interactions. Under alkaline-sodic conditions, inoculation of the strain AD13-4 significantly improved plant biomass and the contents of metabolites (e.g., soluble proteins and sugars) as well as secondary metabolites (e.g., phenols, flavonoids, and terpenoids). The 16S rRNA gene sequencing results indicated that the strain AD13-4 significantly affected the abundance and composition of the rhizospheric microbiota and improved soil activities and physiochemical properties. Our study provides theoretical support for the optimization of saline-alkali-tolerant PGPR and valuable information for elucidating the mechanism of plant alkaline-sodic tolerance.
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Affiliation(s)
- Muneer Ahmed Khoso
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Mingyu Wang
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Zhenzhen Zhou
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Yongxue Huang
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Shenglin Li
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
- College of Life Sciences and Agriculture and Forestry, Qiqihar University, Qiqihar 161006, China
| | - Yiming Zhang
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Guangtao Qian
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Song Nam Ko
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Qiuying Pang
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Changli Liu
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
| | - Lixin Li
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China; (M.A.K.); (M.W.); (Z.Z.); (Y.H.); (S.L.); (Y.Z.); (G.Q.); (S.N.K.); (Q.P.)
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Wichaphian A, Sriket N, Sensupa S, Pekkoh J, Pathom-Aree W, Chromkaew Y, Suwannarach N, Kumla J, Cheirsilp B, Srinuanpan S. Value-added green biorefinery co-products from ultrasonically assisted DES-pretreated Chlorella biomass. ULTRASONICS SONOCHEMISTRY 2023; 100:106628. [PMID: 37793201 PMCID: PMC10550610 DOI: 10.1016/j.ultsonch.2023.106628] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Revised: 09/20/2023] [Accepted: 09/29/2023] [Indexed: 10/06/2023]
Abstract
This study pursued the goal of creating value-added co-products through an environmentally friendly biorefinery approach, employing ultrasonically assisted deep eutectic solvent (DES)-pretreated Chlorella biomass. The primary focus was on generating enriched biodiesel feedstock with exceptional fuel properties and developing hydroponic biofertilizer. The results demonstrated the effectiveness of a two-step process involving a 5-minute ultrasound-assisted DES pretreatment followed by ultrasound-assisted solvent extraction, which efficiently extracted lipids from Chlorella biomass, yielding biodiesel-quality lipids with good cetane number (59.42) and high heating value (40.11 MJ/kg). Notably, this two-step approach (78.04 mg-lipid/g-microalgal biomass) led to a significant 2.10-fold increase in lipid extraction compared to a one-step process (37.15 mg-lipid/g-microalgal biomass) that combined ultrasound-assisted DES pretreatment and solvent extraction. Importantly, the aqueous extract derived from lipid-extracted microalgal biomass residues (LMBRs) showed promise as a component in hydroponic biofertilizer production, supporting lettuce growth in hydroponic deep water culture system. Consequently, microalgae biorefinery co-products hold tremendous potential in enhancing the profitability and sustainability of interconnected sectors, encompassing renewable energy, agriculture, and the environment.
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Affiliation(s)
- Antira Wichaphian
- Master of Science Program in Applied Microbiology (International Program), Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Biorefinery and Bioprocess Engineering Research Cluster, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Nanthakrit Sriket
- Master of Science Program in Applied Microbiology (International Program), Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Biorefinery and Bioprocess Engineering Research Cluster, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Sritip Sensupa
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Biorefinery and Bioprocess Engineering Research Cluster, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Jeeraporn Pekkoh
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Wasu Pathom-Aree
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Yupa Chromkaew
- Department of Plant and Soil Sciences, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Nakarin Suwannarach
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Jaturong Kumla
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand
| | - Benjamas Cheirsilp
- Program of Biotechnology, Center of Excellence in Innovative Biotechnology for Sustainable Utilization of Bioresources, Faculty of Agro-Industry, Prince of Songkla University, Hat Yai, Songkhla 90110, Thailand
| | - Sirasit Srinuanpan
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand; Biorefinery and Bioprocess Engineering Research Cluster, Chiang Mai University, Chiang Mai 50200, Thailand; Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand.
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Miccono MDLA, Yang HW, DeMott L, Melotto M. Review: Losing JAZ4 for growth and defense. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2023; 335:111816. [PMID: 37543224 DOI: 10.1016/j.plantsci.2023.111816] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2023] [Revised: 07/31/2023] [Accepted: 08/02/2023] [Indexed: 08/07/2023]
Abstract
JAZ proteins are involved in the regulation of the jasmonate signaling pathway, which is responsible for various physiological processes, such as defense response, adaptation to abiotic stress, growth, and development in Arabidopsis. The conserved domains of JAZ proteins can serve as binding sites for a broad array of regulatory proteins and the diversity of these protein-protein pairings result in a variety of functional outcomes. Plant growth and defense are two physiological processes that can conflict with each other, resulting in undesirable plant trade-offs. Recent observations have revealed a distinguishing feature of JAZ4; it acts as negative regulator of both plant immunity and growth and development. We suggest that these complex biological processes can be decoupled at the JAZ4 regulatory node, due to prominent expression of JAZ4 in specific tissues and organs. This spatial separation of actions could explain the increased disease resistance and size of the plant root and shoot in the absence of JAZ4. At the tissue level, JAZ4 could play a role in crosstalk between hormones such as ethylene and auxin to control organ differentiation. Deciphering biding of JAZ4 to specific regulators in different tissues and the downstream responses is key to unraveling molecular mechanisms toward developing new crop improvement strategies.
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Affiliation(s)
- Maria de Los Angeles Miccono
- Department of Plant Sciences, University of California, Davis, CA, USA; Horticulture and Agronomy Graduate Group, University of California, Davis, CA, USA
| | - Ho-Wen Yang
- Department of Plant Sciences, University of California, Davis, CA, USA
| | - Logan DeMott
- Department of Plant Sciences, University of California, Davis, CA, USA; Plant Pathology Graduate Group, University of California, Davis, CA, USA
| | - Maeli Melotto
- Department of Plant Sciences, University of California, Davis, CA, USA.
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Bitarishvili S, Dikarev A, Kazakova E, Bondarenko E, Prazyan A, Makarenko E, Babina D, Podobed M, Geras'kin S. Growth, antioxidant system, and phytohormonal status of barley cultivars contrasting in cadmium tolerance. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:59749-59764. [PMID: 37014597 DOI: 10.1007/s11356-023-26523-2] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2022] [Accepted: 03/14/2023] [Indexed: 05/10/2023]
Abstract
Cadmium leads to disturbance of plant growth, and the manifestation of toxicity can vary greatly in different genotypes within one species. In this work we studied the effect of Cd on growth, antioxidant enzyme activity, and phytohormonal status of four barley cultivars (cvs. Simfoniya, Mestnyj, Ca 220702, Malva). According to the earlier study on seedlings, these cultivars were contrast in tolerance to Cd: Simfoniya and Mestnyj are Cd-tolerant and Ca 220702 and Malva are Cd-sensitive. The results presented showed that barley plants accumulated more Cd in straw than in grain. Tolerant cultivars accumulated significantly less Cd in grain than sensitive ones. The leaf area appeared to be a growth parameter susceptible to Cd treatment. The significant differences in leaf area values depended on Cd contamination and were not associated with cultivars' tolerance. Tolerance of cultivars was contingent on the activity of the antioxidant defense system. Indeed, activity of enzymes decreased in sensitive cultivars Ca 220702 and Malva under Cd stress. In contrast, in tolerant cultivars, increased activity of guaiacol peroxidase was revealed. The concentrations of abscisic acid and salicylic acid mostly increased as a result of Cd treatment, while the concentrations of auxins and trans-zeatin either decreased or did not change. The results obtained indicate that antioxidant enzymes and phytohormones play an important role in the response of barley plants to elevated concentrations of cadmium; however, these parameters are not able to explain the differentiation of barley cultivars in terms of tolerance to cadmium at the seedling stage. Therefore, barley intraspecific polymorphism for cadmium resistance is determined by the interplay of antioxidant enzymes, phytohormones, and other factors that require further elucidation.
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Affiliation(s)
- Sofia Bitarishvili
- Russian Institute of Radiology and Agroecology, Obninsk, Russian Federation.
| | - Alexey Dikarev
- Russian Institute of Radiology and Agroecology, Obninsk, Russian Federation
| | - Elizaveta Kazakova
- Russian Institute of Radiology and Agroecology, Obninsk, Russian Federation
| | | | - Alexandr Prazyan
- Russian Institute of Radiology and Agroecology, Obninsk, Russian Federation
| | | | - Darya Babina
- Russian Institute of Radiology and Agroecology, Obninsk, Russian Federation
| | - Marina Podobed
- Russian Institute of Radiology and Agroecology, Obninsk, Russian Federation
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Cytokinin-Controlled Gradient Distribution of Auxin in Arabidopsis Root Tip. Int J Mol Sci 2021; 22:ijms22083874. [PMID: 33918090 PMCID: PMC8069370 DOI: 10.3390/ijms22083874] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2021] [Revised: 04/04/2021] [Accepted: 04/06/2021] [Indexed: 01/21/2023] Open
Abstract
The plant root is a dynamic system, which is able to respond promptly to external environmental stimuli by constantly adjusting its growth and development. A key component regulating this growth and development is the finely tuned cross-talk between the auxin and cytokinin phytohormones. The gradient distribution of auxin is not only important for the growth and development of roots, but also for root growth in various response. Recent studies have shed light on the molecular mechanisms of cytokinin-mediated regulation of local auxin biosynthesis/metabolism and redistribution in establishing active auxin gradients, resulting in cell division and differentiation in primary root tips. In this review, we focus our attention on the molecular mechanisms underlying the cytokinin-controlled auxin gradient in root tips.
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De Zio E, Montagnoli A, Karady M, Terzaghi M, Sferra G, Antoniadi I, Scippa GS, Ljung K, Chiatante D, Trupiano D. Reaction Wood Anatomical Traits and Hormonal Profiles in Poplar Bent Stem and Root. FRONTIERS IN PLANT SCIENCE 2020; 11:590985. [PMID: 33363556 PMCID: PMC7754185 DOI: 10.3389/fpls.2020.590985] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2020] [Accepted: 11/05/2020] [Indexed: 05/27/2023]
Abstract
Reaction wood (RW) formation is an innate physiological response of woody plants to counteract mechanical constraints in nature, reinforce structure and redirect growth toward the vertical direction. Differences and/or similarities between stem and root response to mechanical constraints remain almost unknown especially in relation to phytohormones distribution and RW characteristics. Thus, Populus nigra stem and root subjected to static non-destructive mid-term bending treatment were analyzed. The distribution of tension and compression forces was firstly modeled along the main bent stem and root axis; then, anatomical features, chemical composition, and a complete auxin and cytokinin metabolite profiles of the stretched convex and compressed concave side of three different bent stem and root sectors were analyzed. The results showed that in bent stems RW was produced on the upper stretched convex side whereas in bent roots it was produced on the lower compressed concave side. Anatomical features and chemical analysis showed that bent stem RW was characterized by a low number of vessel, poor lignification, and high carbohydrate, and thus gelatinous layer in fiber cell wall. Conversely, in bent root, RW was characterized by high vessel number and area, without any significant variation in carbohydrate and lignin content. An antagonistic interaction of auxins and different cytokinin forms/conjugates seems to regulate critical aspects of RW formation/development in stem and root to facilitate upward/downward organ bending. The observed differences between the response stem and root to bending highlight how hormonal signaling is highly organ-dependent.
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Affiliation(s)
- Elena De Zio
- Department of Biosciences and Territory, University of Molise, Pesche, Italy
| | - Antonio Montagnoli
- Department of Biotechnology and Life Science, University of Insubria, Varese, Italy
| | - Michal Karady
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umeå, Sweden
- Laboratory of Growth Regulators, Institute of Experimental Botany of the Czech Academy of Sciences and Faculty of Science of Palacký University, Olomouc, Czechia
| | - Mattia Terzaghi
- Department of Chemistry and Biology ‘A. Zambelli’, University of Salerno, Fisciano, Italy
| | - Gabriella Sferra
- Department of Biosciences and Territory, University of Molise, Pesche, Italy
| | - Ioanna Antoniadi
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umeå, Sweden
| | - Gabriella S. Scippa
- Department of Biosciences and Territory, University of Molise, Pesche, Italy
| | - Karin Ljung
- Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umeå, Sweden
| | - Donato Chiatante
- Department of Biotechnology and Life Science, University of Insubria, Varese, Italy
| | - Dalila Trupiano
- Department of Biosciences and Territory, University of Molise, Pesche, Italy
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Burgel L, Hartung J, Schibano D, Graeff-Hönninger S. Impact of Different Phytohormones on Morphology, Yield and Cannabinoid Content of Cannabis sativa L. PLANTS (BASEL, SWITZERLAND) 2020; 9:E725. [PMID: 32521804 PMCID: PMC7355821 DOI: 10.3390/plants9060725] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/22/2020] [Revised: 06/05/2020] [Accepted: 06/05/2020] [Indexed: 11/17/2022]
Abstract
The impact of exogenously applied plant growth regulators (PGR), 1-naphthalenaecetic acid (NAA), 6-benzylaminopurine (BAP), and a mixture of both (NAA/BAP-mix), was investigated in regard to plant height, length of axillary branches, number of internodes, biomass yield and cannabinoid content of three different phytocannabinoid-rich (PCR) Cannabis genotypes. The results showed that total plant height was significantly reduced under the application of NAA (28%), BAP (18%), and NAA/BAP-mix treated plants (15%). Axillary branch length was also significantly reduced by 58% (NAA) and 30% (NAA/BAP-mix). BAP did not significantly reduce the length of axillary branches. The number of internodes was reduced by NAA (19%), BAP (10%), and the NAA/BAP-mix (14%) compared to the untreated control. NAA application influenced the plant architecture of the tested cv. KANADA beneficially, resulting in a more compact growth habitus, while inflorescence yield (23.51 g plant-1) remained similar compared to the control (24.31 g plant-1). Inflorescence yield of v. 0.2x and cv. FED was reduced due to PGR application while cannabinoid content remained stable. Overall, the application of PGR could be used on a genotype-specific level to beneficially influence plant architecture and optimize inflorescence yield per unit area and thus cannabinoid yield, especially in the presence of space limitations under indoor cultivation.
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Affiliation(s)
- Lisa Burgel
- Department of Agronomy, Institute of Crop Science, Cropping Systems and Modelling, University of Hohenheim, 70599 Stuttgart, Germany;
| | - Jens Hartung
- Department of Agronomy, Institute of Crop Science, Biostatistics, University of Hohenheim, 70599 Stuttgart, Germany;
| | | | - Simone Graeff-Hönninger
- Department of Agronomy, Institute of Crop Science, Cropping Systems and Modelling, University of Hohenheim, 70599 Stuttgart, Germany;
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Quiroga G, Erice G, Aroca R, Zamarreño ÁM, García-Mina JM, Ruiz-Lozano JM. Radial water transport in arbuscular mycorrhizal maize plants under drought stress conditions is affected by indole-acetic acid (IAA) application. JOURNAL OF PLANT PHYSIOLOGY 2020; 246-247:153115. [PMID: 31958683 DOI: 10.1016/j.jplph.2020.153115] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2019] [Revised: 12/16/2019] [Accepted: 01/07/2020] [Indexed: 05/26/2023]
Abstract
Drought stress is one of the most devastating abiotic stresses, compromising crop growth, reproductive success and yield. The arbuscular mycorrhizal (AM) symbiosis has been demonstrated to be beneficial in helping the plant to bear with water deficit. In plants, development and stress responses are largely regulated by a complex hormonal crosstalk. Auxins play significant roles in plant growth and development, in responses to different abiotic stresses or in the establishment and functioning of the AM symbiosis. Despite these important functions, the role of indole-3acetic acid (IAA) as a regulator of root water transport and stress response is not well understood. In this study, the effect of exogenous application of IAA on the regulation of root radial water transport in AM plants was analyzed under well-watered and drought stress conditions. Exogenous IAA application affected root hydraulic parameters, mainly osmotic root hydraulic conductivity (Lo), which was decreased in both AM and non-AM plants under water deficit conditions. Under drought, the relative apoplastic water flow was differentially regulated by IAA application in non-AM and AM plants. The effect of IAA on the internal cell component of root water conductivity suggests that aquaporins are involved in the IAA-dependent inhibition of this water pathway.
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Affiliation(s)
- Gabriela Quiroga
- Departamento De Microbiología Del Suelo y Sistemas Simbióticos, Estación Experimental Del Zaidín (CSIC). Profesor Albareda Nº 1, 18008 Granada, Spain
| | - Gorka Erice
- Departamento De Microbiología Del Suelo y Sistemas Simbióticos, Estación Experimental Del Zaidín (CSIC). Profesor Albareda Nº 1, 18008 Granada, Spain
| | - Ricardo Aroca
- Departamento De Microbiología Del Suelo y Sistemas Simbióticos, Estación Experimental Del Zaidín (CSIC). Profesor Albareda Nº 1, 18008 Granada, Spain
| | - Ángel María Zamarreño
- Departmento De Biología Ambiental, Grupo De Química Agrícola y Biología-CMI Roullier, Facultad De Ciencias, Universidad De Navarra, Irunlarrea 1, 31008 Pamplona, Spain
| | - José María García-Mina
- Departmento De Biología Ambiental, Grupo De Química Agrícola y Biología-CMI Roullier, Facultad De Ciencias, Universidad De Navarra, Irunlarrea 1, 31008 Pamplona, Spain
| | - Juan Manuel Ruiz-Lozano
- Departamento De Microbiología Del Suelo y Sistemas Simbióticos, Estación Experimental Del Zaidín (CSIC). Profesor Albareda Nº 1, 18008 Granada, Spain.
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Reyes-Olalde JI, de Folter S. Control of stem cell activity in the carpel margin meristem (CMM) in Arabidopsis. PLANT REPRODUCTION 2019; 32:123-136. [PMID: 30671644 DOI: 10.1007/s00497-018-00359-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2018] [Accepted: 12/24/2018] [Indexed: 05/29/2023]
Abstract
Overview of the current understanding of the molecular mechanisms that regulate meristem activity in the CMM compared to the SAM. Meristems are undifferentiated cells responsible for post-embryonic plant development. The meristems are able to form new organs continuously by carefully balancing between stem cell proliferation and cell differentiation. The plant stem cell niche in each meristem harbors the stem cells that are important to maintain each meristem. The shoot apical meristem (SAM) produces all above-parts of a plant and the molecular mechanisms active in the SAM are actively studied since many years, and models are available. During the reproductive phase of the plant, the inflorescence meristem gives rise to floral meristems, which give rise to the flowers. During floral development, the gynoecium forms that contains a new meristem inside, called the carpel margin meristem (CMM). In Arabidopsis, the gynoecium consists out of two fused carpels, where the CMM forms along the fused carpel margins. In this review, we focus on the molecular mechanisms taking place in the CMM, and we discuss similarities and differences found in the SAM.
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Affiliation(s)
- J Irepan Reyes-Olalde
- Unidad de Genómica Avanzada (LANGEBIO), Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (CINVESTAV-IPN), CP 36824, Irapuato, Guanajuato, Mexico
- Universidad Politécnica del Valle de Toluca, CP 50904, Almoloya de Juárez, Estado de México, Mexico
- Laboratorio de Biología Molecular y Neurociencias, Facultad de Medicina, Universidad Autónoma del Estado de México, CP 50180, Toluca, Estado de Mexico, Mexico
| | - Stefan de Folter
- Unidad de Genómica Avanzada (LANGEBIO), Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (CINVESTAV-IPN), CP 36824, Irapuato, Guanajuato, Mexico.
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11
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Liu J, Moore S, Chen C, Lindsey K. Crosstalk Complexities between Auxin, Cytokinin, and Ethylene in Arabidopsis Root Development: From Experiments to Systems Modeling, and Back Again. MOLECULAR PLANT 2017; 10:1480-1496. [PMID: 29162416 DOI: 10.1016/j.molp.2017.11.002] [Citation(s) in RCA: 90] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2017] [Revised: 11/06/2017] [Accepted: 11/07/2017] [Indexed: 05/23/2023]
Abstract
Understanding how hormones and genes interact to coordinate plant growth in a changing environment is a major challenge in plant developmental biology. Auxin, cytokinin, and ethylene are three important hormones that regulate many aspects of plant development. This review critically evaluates the crosstalk between the three hormones in Arabidopsis root development. We integrate a variety of experimental data into a crosstalk network, which reveals multiple layers of complexity in auxin, cytokinin, and ethylene crosstalk. In particular, data integration reveals an additional, largely overlooked link between the ethylene and cytokinin pathways, which acts through a phosphorelay mechanism. This proposed link addresses outstanding questions on whether ethylene application promotes or inhibits receptor kinase activity of the ethylene receptors. Elucidating the complexity in auxin, cytokinin, and ethylene crosstalk requires a combined experimental and systems modeling approach. We evaluate important modeling efforts for establishing how crosstalk between auxin, cytokinin, and ethylene regulates patterning in root development. We discuss how a novel methodology that iteratively combines experiments with systems modeling analysis is essential for elucidating the complexity in crosstalk of auxin, cytokinin, and ethylene in root development. Finally, we discuss the future challenges from a combined experimental and modeling perspective.
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Affiliation(s)
- Junli Liu
- Department of Biosciences, Durham University, South Road, Durham DH1 3LE, UK
| | - Simon Moore
- Department of Biosciences, Durham University, South Road, Durham DH1 3LE, UK
| | - Chunli Chen
- College of Life Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
| | - Keith Lindsey
- Department of Biosciences, Durham University, South Road, Durham DH1 3LE, UK.
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12
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Olatunji D, Geelen D, Verstraeten I. Control of Endogenous Auxin Levels in Plant Root Development. Int J Mol Sci 2017; 18:E2587. [PMID: 29194427 PMCID: PMC5751190 DOI: 10.3390/ijms18122587] [Citation(s) in RCA: 88] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2017] [Revised: 11/26/2017] [Accepted: 11/28/2017] [Indexed: 12/24/2022] Open
Abstract
In this review, we summarize the different biosynthesis-related pathways that contribute to the regulation of endogenous auxin in plants. We demonstrate that all known genes involved in auxin biosynthesis also have a role in root formation, from the initiation of a root meristem during embryogenesis to the generation of a functional root system with a primary root, secondary lateral root branches and adventitious roots. Furthermore, the versatile adaptation of root development in response to environmental challenges is mediated by both local and distant control of auxin biosynthesis. In conclusion, auxin homeostasis mediated by spatial and temporal regulation of auxin biosynthesis plays a central role in determining root architecture.
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Affiliation(s)
- Damilola Olatunji
- Department of Plant Production, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Gent, Belgium.
| | - Danny Geelen
- Department of Plant Production, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Gent, Belgium.
| | - Inge Verstraeten
- Department of Plant Production, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, 9000 Gent, Belgium.
- Institute of Science and Technology Austria, Am Campus 1, 3400 Klosterneuburg, Austria.
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13
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Bielach A, Hrtyan M, Tognetti VB. Plants under Stress: Involvement of Auxin and Cytokinin. Int J Mol Sci 2017; 18:E1427. [PMID: 28677656 PMCID: PMC5535918 DOI: 10.3390/ijms18071427] [Citation(s) in RCA: 133] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2017] [Revised: 06/26/2017] [Accepted: 06/27/2017] [Indexed: 02/06/2023] Open
Abstract
Plant growth and development are critically influenced by unpredictable abiotic factors. To survive fluctuating changes in their environments, plants have had to develop robust adaptive mechanisms. The dynamic and complementary actions of the auxin and cytokinin pathways regulate a plethora of developmental processes, and their ability to crosstalk makes them ideal candidates for mediating stress-adaptation responses. Other crucial signaling molecules responsible for the tremendous plasticity observed in plant morphology and in response to abiotic stress are reactive oxygen species (ROS). Proper temporal and spatial distribution of ROS and hormone gradients is crucial for plant survival in response to unfavorable environments. In this regard, the convergence of ROS with phytohormone pathways acts as an integrator of external and developmental signals into systemic responses organized to adapt plants to their environments. Auxin and cytokinin signaling pathways have been studied extensively. Nevertheless, we do not yet understand the impact on plant stress tolerance of the sophisticated crosstalk between the two hormones. Here, we review current knowledge on the function of auxin and cytokinin in redirecting growth induced by abiotic stress in order to deduce their potential points of crosstalk.
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Affiliation(s)
- Agnieszka Bielach
- Mendel Centre for Plant Genomics and Proteomics, Central European Institute of Technology (CEITEC), Masaryk University, Kamenice 5, Czech 62500, Brno, Czech Republic.
| | - Monika Hrtyan
- Mendel Centre for Plant Genomics and Proteomics, Central European Institute of Technology (CEITEC), Masaryk University, Kamenice 5, Czech 62500, Brno, Czech Republic.
| | - Vanesa B Tognetti
- Mendel Centre for Plant Genomics and Proteomics, Central European Institute of Technology (CEITEC), Masaryk University, Kamenice 5, Czech 62500, Brno, Czech Republic.
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14
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Rowe JH, Topping JF, Liu J, Lindsey K. Abscisic acid regulates root growth under osmotic stress conditions via an interacting hormonal network with cytokinin, ethylene and auxin. THE NEW PHYTOLOGIST 2016; 211:225-39. [PMID: 26889752 PMCID: PMC4982081 DOI: 10.1111/nph.13882] [Citation(s) in RCA: 147] [Impact Index Per Article: 18.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2015] [Accepted: 01/06/2016] [Indexed: 05/17/2023]
Abstract
Understanding the mechanisms regulating root development under drought conditions is an important question for plant biology and world agriculture. We examine the effect of osmotic stress on abscisic acid (ABA), cytokinin and ethylene responses and how they mediate auxin transport, distribution and root growth through effects on PIN proteins. We integrate experimental data to construct hormonal crosstalk networks to formulate a systems view of root growth regulation by multiple hormones. Experimental analysis shows: that ABA-dependent and ABA-independent stress responses increase under osmotic stress, but cytokinin responses are only slightly reduced; inhibition of root growth under osmotic stress does not require ethylene signalling, but auxin can rescue root growth and meristem size; osmotic stress modulates auxin transporter levels and localization, reducing root auxin concentrations; PIN1 levels are reduced under stress in an ABA-dependent manner, overriding ethylene effects; and the interplay among ABA, ethylene, cytokinin and auxin is tissue-specific, as evidenced by differential responses of PIN1 and PIN2 to osmotic stress. Combining experimental analysis with network construction reveals that ABA regulates root growth under osmotic stress conditions via an interacting hormonal network with cytokinin, ethylene and auxin.
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Affiliation(s)
- James H. Rowe
- The Integrative Cell Biology LaboratorySchool of Biological and Biomedical SciencesDurham UniversitySouth RoadDurhamDH1 3LEUK
| | - Jennifer F. Topping
- The Integrative Cell Biology LaboratorySchool of Biological and Biomedical SciencesDurham UniversitySouth RoadDurhamDH1 3LEUK
| | - Junli Liu
- The Integrative Cell Biology LaboratorySchool of Biological and Biomedical SciencesDurham UniversitySouth RoadDurhamDH1 3LEUK
| | - Keith Lindsey
- The Integrative Cell Biology LaboratorySchool of Biological and Biomedical SciencesDurham UniversitySouth RoadDurhamDH1 3LEUK
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15
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Paul S, Wildhagen H, Janz D, Teichmann T, Hänsch R, Polle A. Tissue- and Cell-Specific Cytokinin Activity in Populus × canescens Monitored by ARR5::GUS Reporter Lines in Summer and Winter. FRONTIERS IN PLANT SCIENCE 2016; 7:652. [PMID: 27242853 PMCID: PMC4865519 DOI: 10.3389/fpls.2016.00652] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2015] [Accepted: 04/28/2016] [Indexed: 05/20/2023]
Abstract
Cytokinins play an important role in vascular development. But knowledge on the cellular localization of this growth hormone in the stem and other organs of woody plants is lacking. The main focus of this study was to investigate the occurrence and cellular localization of active cytokinins in leaves, roots, and along the stem of Populus × canescens and to find out how the pattern is changed between summer and winter. An ARR5::GUS reporter construct was used to monitor distribution of active cytokinins in different tissues of transgenic poplar lines. Three transgenic lines tested under outdoor conditions showed no influence of ARR5::GUS reporter construct on the growth performance compared with the wild-type, but one line lost the reporter activity. ARR5::GUS activity indicated changes in the tissue- and cell type-specific pattern of cytokinin activity during dormancy compared with the growth phase. ARR5::GUS activity, which was present in the root tips in the growing season, disappeared in winter. In the stem apex ground tissue, ARR5::GUS activity was higher in winter than in summer. Immature leaves from tissue-culture grown plants showed inducible ARR5::GUS activity. Leaf primordia in summer showed ARR5::GUS activity, but not the expanded leaves of outdoor plants or leaf primordia in winter. In stem cross sections, the most prominent ARR5::GUS activity was detected in the cortex region and in the rays of bark in summer and in winter. In the cambial zone the ARR5::GUS activity was more pronounced in the dormant than in growth phase. The pith and the ray cells adjacent to the vessels also displayed ARR5::GUS activity. In silico analyses of the tissue-specific expression patterns of the whole PtRR type-A family of poplar showed that PtRR10, the closest ortholog to the Arabidopsis ARR5 gene, was usually the most highly expressed gene in all tissues. In conclusion, gene expression and tissue-localization indicate high activity of cytokinins not only in summer, but also in winter. The presence of the signal in meristematic tissues supports their role in meristem maintenance. The reporter lines will be useful to study the involvement of cytokinins in acclimation of poplar growth to stress.
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Affiliation(s)
- Shanty Paul
- Department of Forest Botany and Tree Physiology, Georg-August-Universität GöttingenGöttingen, Germany
| | - Henning Wildhagen
- Department of Forest Botany and Tree Physiology, Georg-August-Universität GöttingenGöttingen, Germany
| | - Dennis Janz
- Department of Forest Botany and Tree Physiology, Georg-August-Universität GöttingenGöttingen, Germany
| | - Thomas Teichmann
- Department of Forest Botany and Tree Physiology, Georg-August-Universität GöttingenGöttingen, Germany
| | - Robert Hänsch
- Department of Molecular and Cell Biology of Plants, Institute for Plant Biology, University of TechnologyBraunschweig, Germany
| | - Andrea Polle
- Department of Forest Botany and Tree Physiology, Georg-August-Universität GöttingenGöttingen, Germany
- *Correspondence: Andrea Polle,
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16
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Moore S, Zhang X, Liu J, Lindsey K. Some fundamental aspects of modeling auxin patterning in the context of auxin-ethylene-cytokinin crosstalk. PLANT SIGNALING & BEHAVIOR 2015; 10:e1056424. [PMID: 26237293 PMCID: PMC4883870 DOI: 10.1080/15592324.2015.1056424] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2015] [Accepted: 05/26/2015] [Indexed: 05/30/2023]
Abstract
The activities of hormones in the Arabidopsis root depend on cellular context and exhibit either synergistic or antagonistic interactions. Patterning in Arabidopsis root development is coordinated via a localized auxin concentration maximum in the root tip, mediating transcription of key regulatory genes. Auxin concentration and response are each regulated by diverse interacting hormones and gene expression and therefore cannot change independently of those hormones and genes. For example, experimental data accumulated over many years have shown that both ethylene and cytokinin regulate auxin concentration and response. Using the crosstalk of auxin-ethylene-cytokinin as a paradigm, we discuss the links between experimental data, reaction kinetics and spatiotemporal modeling to dissect hormonal crosstalk. In particular, we discuss how kinetic equations for modeling auxin concentration are formulated based on experimental data and also the underlying assumptions for deriving those kinetic equations. Furthermore, we show that, by integrating kinetic equations with spatial root structure, modeling of spatiotemporal hormonal crosstalk is a powerful tool for analyzing and predicting the roles of multiple hormone interactions in auxin patterning. Finally, we summarize important considerations in developing a spatiotemporal hormonal crosstalk model for plant root development.
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Affiliation(s)
- Simon Moore
- The Integrative Cell Biology Laboratory, School of Biological and Biomedical Sciences, Durham University; Durham, UK
| | - Xiaoxian Zhang
- School of Engineering, The University of Liverpool; Liverpool, UK
| | - Junli Liu
- The Integrative Cell Biology Laboratory, School of Biological and Biomedical Sciences, Durham University; Durham, UK
- Joint corresponding authors
| | - Keith Lindsey
- The Integrative Cell Biology Laboratory, School of Biological and Biomedical Sciences, Durham University; Durham, UK
- Joint corresponding authors
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17
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Jahn L, Mucha S, Bergmann S, Horn C, Staswick P, Steffens B, Siemens J, Ludwig-Müller J. The Clubroot Pathogen (Plasmodiophora brassicae) Influences Auxin Signaling to Regulate Auxin Homeostasis in Arabidopsis. PLANTS 2013; 2:726-49. [PMID: 27137401 PMCID: PMC4844388 DOI: 10.3390/plants2040726] [Citation(s) in RCA: 41] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2013] [Revised: 10/17/2013] [Accepted: 11/18/2013] [Indexed: 11/16/2022]
Abstract
The clubroot disease, caused by the obligate biotrophic protist Plasmodiophora brassicae, affects cruciferous crops worldwide. It is characterized by root swellings as symptoms, which are dependent on the alteration of auxin and cytokinin metabolism. Here, we describe that two different classes of auxin receptors, the TIR family and the auxin binding protein 1 (ABP1) in Arabidopsis thaliana are transcriptionally upregulated upon gall formation. Mutations in the TIR family resulted in more susceptible reactions to the root pathogen. As target genes for the different pathways we have investigated the transcriptional regulation of selected transcriptional repressors (Aux/IAA) and transcription factors (ARF). As the TIR pathway controls auxin homeostasis via the upregulation of some auxin conjugate synthetases (GH3), the expression of selected GH3 genes was also investigated, showing in most cases upregulation. A double gh3 mutant showed also slightly higher susceptibility to P. brassicae infection, while all tested single mutants did not show any alteration in the clubroot phenotype. As targets for the ABP1-induced cell elongation the effect of potassium channel blockers on clubroot formation was investigated. Treatment with tetraethylammonium (TEA) resulted in less severe clubroot symptoms. This research provides evidence for the involvement of two auxin signaling pathways in Arabidopsis needed for the establishment of the root galls by P. brassicae.
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Affiliation(s)
- Linda Jahn
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany.
| | - Stefanie Mucha
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany.
| | - Sabine Bergmann
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany.
| | - Cornelia Horn
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany.
| | - Paul Staswick
- Department of Agronomy and Horticulture, University of Nebraska, 379 Keim, Lincoln, NE 68521 USA.
| | - Bianka Steffens
- Botanisches Institut, Universität Kiel, Am Botanischen Garten 5, 24118 Kiel, Germany.
| | - Johannes Siemens
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany.
| | - Jutta Ludwig-Müller
- Institut für Botanik, Technische Universität Dresden, 01062 Dresden, Germany.
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