Influence of Coding Variability in APP-Aβ Metabolism Genes in Sporadic Alzheimer's Disease

The cerebral deposition of Aβ42, a neurotoxic proteolytic derivate of amyloid precursor protein (APP), is a central event in Alzheimer's disease (AD)(Amyloid hypothesis). Given the key role of APP-Aβ metabolism in AD pathogenesis, we selected 29 genes involved in APP processing, Aβ degradation and clearance. We then used exome and genome sequencing to investigate the single independent (single-variant association test) and cumulative (gene-based association test) effect of coding variants in these genes as potential susceptibility factors for AD, in a cohort composed of 332 sporadic and mainly late-onset AD cases and 676 elderly controls from North America and the UK. Our study shows that common coding variability in these genes does not play a major role for the disease development. In the single-variant association analysis, the main hits, none of which statistically significant after multiple testing correction (1.9e-4 Collapse

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MESH Headings

• Alzheimer Disease/genetics
• Alzheimer Disease/metabolism
• Amyloid beta-Peptides/genetics
• Amyloid beta-Peptides/metabolism
• Amyloid beta-Protein Precursor/genetics
• Amyloid beta-Protein Precursor/metabolism
• Computational Biology
• Exome
• Humans

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Grants

• U24 AG021886 NIA NIH HHS
• P50 AG016574 NIA NIH HHS
• U01 AG052411 NIA NIH HHS
• MR/L016397/1 Medical Research Council
• P01 AG026276 NIA NIH HHS
• Z01 AG000950 Intramural NIH HHS
• G1100695 Medical Research Council
• RF1 AG044546 NIA NIH HHS
• Wellcome Trust
• R01 AG018023 NIA NIH HHS
• U01 AG006786 NIA NIH HHS
• P01 AG003991 NIA NIH HHS
• P50 AG005681 NIA NIH HHS
• Alzheimer’s Research UK
• Wellcome Trust/MRC Joint Call in Neurodegeneration Award
• National Institute for Health Research Biomedical Research Unit in Dementia at University College London Hospitals
• the Big Lottery
• Alzheimer's Research UK
• Intramural Research Programs of the National Institute on Aging and the National Institute of Neurological Disease and Stroke

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Affiliation(s)

Celeste Sassi Reta Lila, Weston Research Laboratories, Department of Molecular Neuroscience, UCL Institute of Neurology, London, United Kingdom Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, Bethesda, MD, United States of America Department of Experimental Neurology, Center for Stroke Research Berlin (CSB), Charite’ Universitätmedizin, Berlin, Germany German Center for Neurodegenerative Diseases (DZNE), Berlin site, Germany
Perry G. Ridge Departments of Biology, Neuroscience, Brigham Young University, Provo, UT, United States of America
Michael A. Nalls Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, Bethesda, MD, United States of America
Raphael Gibbs Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, Bethesda, MD, United States of America
Jinhui Ding Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, Bethesda, MD, United States of America
Michelle K. Lupton King's College London Institute of Psychiatry, London, United Kingdom QIMR Berghofer Medical Research Institute, Brisbane, Queensland, Australia
Claire Troakes King's College London Institute of Psychiatry, London, United Kingdom
Katie Lunnon King's College London Institute of Psychiatry, London, United Kingdom
Safa Al-Sarraj King's College London Institute of Psychiatry, London, United Kingdom
Kristelle S. Brown Translation Cell Sciences-Human Genetics, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, United Kingdom
Christopher Medway Translation Cell Sciences-Human Genetics, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, United Kingdom
Jenny Lord Translation Cell Sciences-Human Genetics, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, United Kingdom
James Turton Translation Cell Sciences-Human Genetics, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, United Kingdom
ARUK Consortium
Kevin Morgan Translation Cell Sciences-Human Genetics, School of Life Sciences, Queens Medical Centre, University of Nottingham, Nottingham, United Kingdom
John F. Powell King's College London Institute of Psychiatry, London, United Kingdom
John S. Kauwe Departments of Biology, Neuroscience, Brigham Young University, Provo, UT, United States of America
Carlos Cruchaga Washington University, Division of Biology and Biomedical Sciences St. Louis, MO, United States of America
Jose Bras Reta Lila, Weston Research Laboratories, Department of Molecular Neuroscience, UCL Institute of Neurology, London, United Kingdom
Alison M. Goate Icahn School of Medicine at Mount Sinai, Icahn Medical Institute, New York, NY, United States of America
Andrew B. Singleton Laboratory of Neurogenetics, National Institute on Aging, National Institutes of Health, Bethesda, MD, United States of America
Rita Guerreiro Reta Lila, Weston Research Laboratories, Department of Molecular Neuroscience, UCL Institute of Neurology, London, United Kingdom
John Hardy Reta Lila, Weston Research Laboratories, Department of Molecular Neuroscience, UCL Institute of Neurology, London, United Kingdom

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