1
|
Atanasov M, Spiller N, Neese F. Magnetic exchange and valence delocalization in a mixed valence [Fe 2+Fe 3+Te 2] + complex: insights from theory and interpretations of magnetic and spectroscopic data. Phys Chem Chem Phys 2022; 24:20760-20775. [PMID: 36043991 DOI: 10.1039/d2cp02975h] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A mixed valence binuclear Fe2.5+-Fe2.5+ (Robin-Day Class III) transition metal complex, [Fe2.5+μTe2Fe2.5+]1-, composed of two FeN2Te2 pseudo-tetrahedral units with μ-bridging Te2- ligands was reported to exist in an unprecedented S = 3/2 ground state (Nature Chemistry, https://doi.org/10.1038/s41557-021-00853-5). For this and the homologous complexes containing Se2- and S2-, the Anderson-Hasegawa double exchange spin-Hamiltonian was broadly used to interpret the corresponding structural, spectroscopic and magnetic data. First principles multireference ab initio calculations are used here to simulate magnetic and spectroscopic EPR data; analysis of the results affords a rationale for the stabilization of the S = 3/2 ground state of the Fe2 pair. Complete Active Space Self-Consistent Field (CASSCF) calculations and dynamical correlation accounted for by means of N-Electron Valence Perturbation Theory to Second Order (NEVPT2) reproduce well the g-factors determined from simulations of X-band EPR spectra. A crucial technical tool to achieve these results is: (i) use of a localized orbital formulation of the many-particle problem at the scalar-relativistic CASSCF step; (ii) choice of state averaging over states of a given spin (at the CASCI/NEVPT2 step); and (iii) accounting for spin-orbit coupling within the non-relativistic Born-Oppenheimer (BO) many-particle basis using Quasi-Degenerate Perturbation Theory (QDPT). The inclusion of the S = 5/2 spin manifold reproduced the observed increase in the magnetic susceptibility (χT) in the high temperature range (T > 100 K), which is explained by thermal population of the S = 5/2 excited state at energy 160 cm-1 above the S = 3/2 ground state. Theoretical values of χT from experimentally reported data points in the temperature range from 3 to 30 K were further computed and analyzed using a model which takes spin-phonon coupling into account. The model considerations and the computational protocols of this study are generally applicable to any Class I/II mixed valence dimer. The work can potentially stimulate further experimental and theoretical work on bi- and oligonuclear transition metal complexes of importance to bioinorganic chemistry and life sciences.
Collapse
Affiliation(s)
- M Atanasov
- Department of Molecular Theory and Spectroscopy, Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany. .,Institute of General and Inorganic Chemistry, Bulgarian Academy of Science, Akad-Georgi Bontchev Str. Bl.11, 1113-Sofia, Bulgaria
| | - N Spiller
- Department of Molecular Theory and Spectroscopy, Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany.
| | - F Neese
- Department of Molecular Theory and Spectroscopy, Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, D-45470 Mülheim an der Ruhr, Germany.
| |
Collapse
|
2
|
Tran VA, Neese F. Double-hybrid density functional theory for g-tensor calculations using gauge including atomic orbitals. J Chem Phys 2020; 153:054105. [DOI: 10.1063/5.0013799] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- V. A. Tran
- Max-Planck-Institut für Kohlenforschung, Mülheim an der Ruhr, Germany
| | - F. Neese
- Max-Planck-Institut für Kohlenforschung, Mülheim an der Ruhr, Germany
| |
Collapse
|
3
|
Kochem A, Bill E, Neese F, van Gastel M. Mössbauer and computational investigation of a functional [NiFe] hydrogenase model complex. Chem Commun (Camb) 2015; 51:2099-102. [DOI: 10.1039/c4cc09035g] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Hydrogen splitting in a NiFe hydrogenase model has been investigated by Mössbauer spectroscopy to gain insight into the catalytic mechanism.
Collapse
Affiliation(s)
- A. Kochem
- Max Planck Institute for Chemical Energy Conversion
- D-45470 Mülheim an der Ruhr
- Germany
| | - E. Bill
- Max Planck Institute for Chemical Energy Conversion
- D-45470 Mülheim an der Ruhr
- Germany
| | - F. Neese
- Max Planck Institute for Chemical Energy Conversion
- D-45470 Mülheim an der Ruhr
- Germany
| | - M. van Gastel
- Max Planck Institute for Chemical Energy Conversion
- D-45470 Mülheim an der Ruhr
- Germany
| |
Collapse
|
4
|
Cox N, Retegan M, Neese F, Pantazis DA, Boussac A, Lubitz W. Electronic structure of the oxygen-evolving complex in photosystem II prior to O-O bond formation. Science 2014; 345:804-8. [DOI: 10.1126/science.1254910] [Citation(s) in RCA: 375] [Impact Index Per Article: 37.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
|
5
|
Sandhoefer B, Neese F. One-electron contributions to the g-tensor for second-order Douglas–Kroll–Hess theory. J Chem Phys 2012; 137:094102. [DOI: 10.1063/1.4747454] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
|
6
|
Rota JB, Knecht S, Fleig T, Ganyushin D, Saue T, Neese F, Bolvin H. Zero field splitting of the chalcogen diatomics using relativistic correlated wave-function methods. J Chem Phys 2011; 135:114106. [DOI: 10.1063/1.3636084] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
|
7
|
Atanasov M, Delley B, Neese F, Tregenna-Piggott PL, Sigrist M. Theoretical Insights into the Magnetostructural Correlations in Mn3-Based Single-Molecule Magnets. Inorg Chem 2011; 50:2112-24. [DOI: 10.1021/ic1023482] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- M. Atanasov
- Paul Scherrer Institute and ETH Zürich, CH-5232 Villigen PSI, Switzerland
- Institute of General and Inorganic Chemistry, Bulgarian Academy of Sciences, 1113 Sofia, Bulgaria
- Lehrstuhl für Theoretische Chemie, Universität Bonn, Wegelerstrasse 12, D-53115 Bonn, Germany
| | - B. Delley
- Paul Scherrer Institute and ETH Zürich, CH-5232 Villigen PSI, Switzerland
| | - F. Neese
- Lehrstuhl für Theoretische Chemie, Universität Bonn, Wegelerstrasse 12, D-53115 Bonn, Germany
| | | | - M. Sigrist
- Institute Laue Langevin, Avenue des Martyrs, BP 156, F-38042 Grenoble Cedex 9, France
- Institute of Chemistry, Universitetsparken 5, DK-2100 Copenhagen, Denmark
| |
Collapse
|
8
|
Orio M, Philouze C, Jarjayes O, Neese F, Thomas F. Spin interaction in octahedral zinc complexes of mono- and diradical Schiff and mannich bases. Inorg Chem 2010; 49:646-58. [PMID: 20000450 DOI: 10.1021/ic901846u] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Abstract
The four Schiff bases 2-tert-butyl-4-methoxy-6-[(pyridin-2-ylmethylimino)methyl]phenol, 2,4-di-tert-butyl-6-[(pyridin-2-ylmethylimino)methyl]phenol, 2-tert-butyl-4-methoxy-6-(quinolin-8-yliminomethyl)phenol, and 2,4-di-tert-butyl-6-(quinolin-8-yliminomethyl)phenol) as well as one Mannich base, N,N',N,N'-bis[(2-hydroxy-3,5-di-tert-butylbenzyl)(2-pyridylmethyl)]ethylenediamine, and their zinc bis-phenolate complexes 1-5, respectively, have been prepared. The complexes 4 and 5 have been characterized by X-ray diffraction crystallography, showing a zinc ion within an octahedral environment, with a cis orientation of the phenolate moieties. 1-5 exhibit in their cyclic voltammetry curves two anodic reversible waves attributable to the successive oxidation of the phenolates into phenoxyl radicals. Bulk electrolysis at ca. +0.1 V affords the zinc-coordinated monophenoxyl radical species (1(*))(+)-(5(*))(+) characterized by UV-vis absorption bands at 400-440 nm. The more stable radicals are (3(*))(+) and (4(*))(+) (half-life higher than 90 min at 298 K), likely due to the increased charge delocalization within the quinoline moieties. These species exhibit a significant additional near-IR band (epsilon > 1650 M(-1) cm(-1)) attributed to a CT transition. In the two-electron-oxidized species (1(**))(2+)-(5(**))(2+) the radical spins present a weak magnetic coupling. EPR reveals an antiferromagnetic exchange interaction for (1(**))(2+)-(4(**))(2+), whereas an unusual ferromagnetic exchange coupling is operative in (5(**))(2+). The weak magnitude of experimental |J| values (within the 1-5 cm(-1) range) as well as their sign could be well reproduced by DFT calculations at the B3LYP level. The small energy gap between the ground and the first excited spin states allows us to investigate the zero-field splitting (ZFS) of the triplet by EPR spectroscopy. This parameter is found to be axial for all systems, with |D| values of 0.0163 cm(-1) for (1(**))(2+), 0.0182 cm(-1) for (2(**))(2+), 0.0144 cm(-1) for (3(**))(2+), 0.0160 cm(-1) for (4(**))(2+), and 0.0115 cm(-1) for (5(**))(2+). The trend between experimental ZFS is confirmed by DFT calculations, which give further insight regarding its sign (negative for all the compounds). Lower ZFS values are obtained for (2(**))(2+) compared to (1(**))(2+) (and also for (4(**))(2+) compared to (3(**))(2+)), which can be interpreted by an increased delocalization of the spin density over the methoxy para substituent. Significant spin population on the quinoline also contributes to a lowering of the |D| value, as observed when (3(**))(2+) is compared to (1(**))(2+) (and also when (4(**))(2+) is compared to (2(**))(2+)).
Collapse
Affiliation(s)
- M Orio
- Institute for Physical and Theoretical Chemistry, Universität Bonn, Wegelerstrasse 12, D-53113 Bonn, Germany
| | | | | | | | | |
Collapse
|
9
|
|
10
|
van Gastel M, Fichtner C, Neese F, Lubitz W. EPR experiments to elucidate the structure of the ready and unready states of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F. Biochem Soc Trans 2005; 33:7-11. [PMID: 15667250 DOI: 10.1042/bst0330007] [Citation(s) in RCA: 36] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Isolation and purification of the [NiFe] hydrogenase of Desulfovibrio vulgaris Miyazaki F under aerobic conditions leads to a mixture of two states, Ni-A (unready) and Ni-B (ready). The two states are distinguished by different activation times and different EPR spectra. HYSCORE and ENDOR data and DFT calculations show that both states have an exchangeable proton, albeit with a different (1)H hyperfine coupling. This proton is assigned to the bridging ligand between Ni and Fe. For Ni-B, a hydroxo ligand is found. For Ni-A, either a hydroxo in a different orientation or a hydroperoxo-bridging ligand is present.
Collapse
Affiliation(s)
- M van Gastel
- Max-Planck-Institut für Bioanorganische Chemie, P.O. Box 101365, D-45413 Mülheim an der Ruhr, Germany
| | | | | | | |
Collapse
|
11
|
Wanko M, Hoffmann M, Strodel P, Koslowski A, Thiel W, Neese F, Frauenheim T, Elstner M. Calculating Absorption Shifts for Retinal Proteins: Computational Challenges. J Phys Chem B 2005; 109:3606-15. [PMID: 16851399 DOI: 10.1021/jp0463060] [Citation(s) in RCA: 202] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Rhodopsins can modulate the optical properties of their chromophores over a wide range of wavelengths. The mechanism for this spectral tuning is based on the response of the retinal chromophore to external stress and the interaction with the charged, polar, and polarizable amino acids of the protein environment and is connected to its large change in dipole moment upon excitation, its large electronic polarizability, and its structural flexibility. In this work, we investigate the accuracy of computational approaches for modeling changes in absorption energies with respect to changes in geometry and applied external electric fields. We illustrate the high sensitivity of absorption energies on the ground-state structure of retinal, which varies significantly with the computational method used for geometry optimization. The response to external fields, in particular to point charges which model the protein environment in combined quantum mechanical/molecular mechanical (QM/MM) applications, is a crucial feature, which is not properly represented by previously used methods, such as time-dependent density functional theory (TDDFT), complete active space self-consistent field (CASSCF), and Hartree-Fock (HF) or semiempirical configuration interaction singles (CIS). This is discussed in detail for bacteriorhodopsin (bR), a protein which blue-shifts retinal gas-phase excitation energy by about 0.5 eV. As a result of this study, we propose a procedure which combines structure optimization or molecular dynamics simulation using DFT methods with a semiempirical or ab initio multireference configuration interaction treatment of the excitation energies. Using a conventional QM/MM point charge representation of the protein environment, we obtain an absorption energy for bR of 2.34 eV. This result is already close to the experimental value of 2.18 eV, even without considering the effects of protein polarization, differential dispersion, and conformational sampling.
Collapse
Affiliation(s)
- M Wanko
- Department of Theoretical Physics, University of Paderborn, D-33098 Paderborn, Germany
| | | | | | | | | | | | | | | |
Collapse
|
12
|
Rudolf M, Einsle O, Neese F, Kroneck PMH. Pentahaem cytochrome c nitrite reductase: reaction with hydroxylamine, a potential reaction intermediate and substrate. Biochem Soc Trans 2002; 30:649-53. [PMID: 12196156 DOI: 10.1042/bst0300649] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The pentahaem enzyme cytochrome c nitrite reductase catalyses the reduction of nitrite to ammonia, a key reaction in the biological nitrogen cycle. The enzyme can also transform nitrogen monoxide and hydroxylamine, two potential bound reaction intermediates, into ammonia. Structural and mechanistic aspects of the multihaem enzyme are discussed in comparison with hydroxylamine oxidoreductase, a trimeric protein with eight haem molecules per subunit.
Collapse
Affiliation(s)
- M Rudolf
- Fachbereich Biologie, Universität Konstanz, Fach M665, D-78457 Konstanz, Germany
| | | | | | | |
Collapse
|
13
|
Grapperhaus CA, Bill E, Weyhermüller T, Neese F, Wieghardt K. Molecular and electronic structure of [Mn(V)N(cyclam-acetato)]PF6. A combined experimental and DFT study. Inorg Chem 2001; 40:4191-8. [PMID: 11487322 DOI: 10.1021/ic001370r] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
From the reaction of Li(cyclam-acetate), MnCl(2).4H(2)O, and KPF(6) in methanol brown microcrystals of [Mn(III)Cl(cyclam-acetato)]PF(6) (1) were obtained in the presence of air (cyclam-acetic acid = 1,4,8,11-tetraazacyclotetradecane-1-acetic acid). The reaction of 1 in aqueous NH(3) solution with NaOCl produced blue crystals of [Mn(V)N(cyclam-acetato)]PF(6) (2). Complexes 1 and 2 were characterized by single-crystal X-ray crystallography, IR and Raman, electronic absorption, and (1)H, (13)C, and (15)N NMR spectroscopies. Their magnetochemistry as well as their electrochemistry have been investigated. The complexes [MnN(cyclam-acetato)](+/2+) were studied by theoretical calculations at the DFT and semiempirical levels in order to obtain more insight into the ground and excited states of the Mn(V)(triple bond)N unit. Structural and spectroscopic parameters were successfully calculated and compared to experiment. A pictorial description of the bonding has been developed.
Collapse
Affiliation(s)
- C A Grapperhaus
- Max-Planck-Institut für Strahlenchemie, Stiftstrasse 34-36, D-45470 Mülheim an der Ruhr, Germany
| | | | | | | | | |
Collapse
|
14
|
Charnock JM, Dreusch A, Körner H, Neese F, Nelson J, Kannt A, Michel H, Garner CD, Kroneck PM, Zumft WG. Structural investigations of the CuA centre of nitrous oxide reductase from Pseudomonas stutzeri by site-directed mutagenesis and X-ray absorption spectroscopy. Eur J Biochem 2000; 267:1368-81. [PMID: 10691974 DOI: 10.1046/j.1432-1327.2000.01131.x] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Nitrous oxide reductase is the terminal component of a respiratory chain that utilizes N2O in lieu of oxygen. It is a homodimer carrying in each subunit the electron transfer site, CuA, and the substrate-reducing catalytic centre, CuZ. Spectroscopic data have provided robust evidence for CuA as a binuclear, mixed-valence metal site. To provide further structural information on the CuA centre of N2O reductase, site directed mutagenesis and Cu K-edge X-ray absorption spectroscopic investigation have been undertaken. Candidate amino acids as ligands for the CuA centre of the enzyme from Pseudomonas stutzeri ATCC14405 were substituted by evolutionary conserved residues or amino acids similar to the wild-type residues. The mutations identified the amino acids His583, Cys618, Cys622 and Met629 as ligands of Cu1, and Cys618, Cys622 and His626 as the minimal set of ligands for Cu2 of the CuA centre. Other amino acid substitutions indicated His494 as a likely ligand of CuZ, and an indirect role for Asp580, compatible with a docking function for the electron donor. Cu binding and spectroscopic properties of recombinant N2O reductase proteins point at intersubunit or interdomain interaction of CuA and CuZ. Cu K-edge X-ray absorption spectra have been recorded to investigate the local environment of the Cu centres in N2O reductase. Cu K-edge Extended X-ray Absorption Fine Structure (EXAFS) for binuclear Cu chemical systems show clear evidence for Cu backscattering at approximately 2.5 A. The Cu K-edge EXAFS of the CuA centre of N2O reductase is very similar to that of the CuA centre of cytochrome c oxidase and the optimum simulation of the experimental data involves backscattering from a histidine group with Cu-N of 1.92 A, two sulfur atoms at 2.24 A and a Cu atom at 2. 43 A, and allows for the presence of a further light atom (oxygen or nitrogen) at 2.05 A. The interpretation of the CuA EXAFS is in line with ligands assigned by site-directed mutagenesis. By a difference spectrum approach, using the Cu K-edge EXAFS of the holoenzyme and that of the CuA-only form, histidine was identified as a major contributor to the backscattering. A structural model for the CuA centre of N2O reductase has been generated on the basis of the atomic coordinates for the homologous domain of cytochrome c oxidase and incorporating our current results and previous spectroscopic data.
Collapse
|
15
|
Solomon EI, Brunold TC, Davis MI, Kemsley JN, Lee SK, Lehnert N, Neese F, Skulan AJ, Yang YS, Zhou J. Geometric and electronic structure/function correlations in non-heme iron enzymes. Chem Rev 2000; 100:235-350. [PMID: 11749238 DOI: 10.1021/cr9900275] [Citation(s) in RCA: 1351] [Impact Index Per Article: 56.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- E I Solomon
- Department of Chemistry, Stanford University, Stanford, California 94305-5080
| | | | | | | | | | | | | | | | | | | |
Collapse
|
16
|
Neese F, Kappl R, Hüttermann J, Zumft WG, Kroneck PMH. Probing the ground state of the purple mixed valence CuA center in nitrous oxide reductase: a CW ENDOR (X-band) study of the 65Cu, 15N-histidine labeled enzyme and interpretation of hyperfine couplings by molecular orbital calculations. J Biol Inorg Chem 1998. [DOI: 10.1007/pl00010649] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
|
17
|
|
18
|
Abstract
Spectroscopic properties of the redox-active iron in the active site of plant and mammalian lipoxygenases can now be combined with recent crystal structure determinations to obtain new insights into lipoxygenase reaction mechanisms.
Collapse
Affiliation(s)
- E I Solomon
- Department of Chemistry, Stanford University, Standford, CA 94805, USA.
| | | | | | | |
Collapse
|
19
|
Neese F, Zumft W, Antholine W, Kroneck P. Novel binuclear copper chromophores in biology: The CuA and Cuz sites in bacterial nitrous oxide reductase. J Inorg Biochem 1997. [DOI: 10.1016/s0162-0134(97)80287-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
|
20
|
Farrar JA, Neese F, Lappalainen P, Kroneck PMH, Saraste M, Zumft WG, Thomson AJ. The Electronic Structure of CuA: A Novel Mixed-Valence Dinuclear Copper Electron-Transfer Center. J Am Chem Soc 1996. [DOI: 10.1021/ja9618715] [Citation(s) in RCA: 145] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- J. A. Farrar
- Contribution from the School of Chemical Sciences, University of East Anglia, Norwich NR4 7TJ, U.K., Fakultät für Biologie, Universität Konstanz, D-78434 Konstanz, Germany, European Molecular Biology Laboratory, D-69012 Heidelberg, Germany, and Lehrstuhl für Mikrobiologie, Universität Fridericiana, D-76128 Karlsruhe, Germany
| | - F. Neese
- Contribution from the School of Chemical Sciences, University of East Anglia, Norwich NR4 7TJ, U.K., Fakultät für Biologie, Universität Konstanz, D-78434 Konstanz, Germany, European Molecular Biology Laboratory, D-69012 Heidelberg, Germany, and Lehrstuhl für Mikrobiologie, Universität Fridericiana, D-76128 Karlsruhe, Germany
| | - P. Lappalainen
- Contribution from the School of Chemical Sciences, University of East Anglia, Norwich NR4 7TJ, U.K., Fakultät für Biologie, Universität Konstanz, D-78434 Konstanz, Germany, European Molecular Biology Laboratory, D-69012 Heidelberg, Germany, and Lehrstuhl für Mikrobiologie, Universität Fridericiana, D-76128 Karlsruhe, Germany
| | - P. M. H. Kroneck
- Contribution from the School of Chemical Sciences, University of East Anglia, Norwich NR4 7TJ, U.K., Fakultät für Biologie, Universität Konstanz, D-78434 Konstanz, Germany, European Molecular Biology Laboratory, D-69012 Heidelberg, Germany, and Lehrstuhl für Mikrobiologie, Universität Fridericiana, D-76128 Karlsruhe, Germany
| | - M. Saraste
- Contribution from the School of Chemical Sciences, University of East Anglia, Norwich NR4 7TJ, U.K., Fakultät für Biologie, Universität Konstanz, D-78434 Konstanz, Germany, European Molecular Biology Laboratory, D-69012 Heidelberg, Germany, and Lehrstuhl für Mikrobiologie, Universität Fridericiana, D-76128 Karlsruhe, Germany
| | - W. G. Zumft
- Contribution from the School of Chemical Sciences, University of East Anglia, Norwich NR4 7TJ, U.K., Fakultät für Biologie, Universität Konstanz, D-78434 Konstanz, Germany, European Molecular Biology Laboratory, D-69012 Heidelberg, Germany, and Lehrstuhl für Mikrobiologie, Universität Fridericiana, D-76128 Karlsruhe, Germany
| | - A. J. Thomson
- Contribution from the School of Chemical Sciences, University of East Anglia, Norwich NR4 7TJ, U.K., Fakultät für Biologie, Universität Konstanz, D-78434 Konstanz, Germany, European Molecular Biology Laboratory, D-69012 Heidelberg, Germany, and Lehrstuhl für Mikrobiologie, Universität Fridericiana, D-76128 Karlsruhe, Germany
| |
Collapse
|
21
|
Neese F, Zumft W, Antholine W, Kroneck P. On the nature of the CuA-site in nitrous oxide reductase from Pseudomonas stutzeri. J Inorg Biochem 1995. [DOI: 10.1016/0162-0134(95)97776-m] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
|
22
|
Singh RJ, Hogg N, Neese F, Joseph J, Kalyanaraman B. Trapping of nitric oxide formed during photolysis of sodium nitroprusside in aqueous and lipid phases: an electron spin resonance study. Photochem Photobiol 1995; 61:325-30. [PMID: 7740075 DOI: 10.1111/j.1751-1097.1995.tb08616.x] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
Abstract
Photolytic decomposition of sodium nitroprusside (SNP), a widely used nitrovasodilator, produced nitric oxide (.NO), which was continuously monitored by electron spin resonance (ESR) spectroscopy. The .NO present in the aqueous or the lipid phase was trapped by either a hydrophilic or a hydrophobic nitronyl nitroxide, respectively, to form the corresponding imino nitroxide. The conversion of nitronyl nitroxide to imino nitroxide was monitored by ESR spectrometry. The quantum yield for the generation of .NO from SNP, measured from the rate of decay of nitronyl nitroxide, was 0.201 +/- 0.007 and 0.324 +/- 0.01 (mean +/- SD, n = 3) at 420 nm and 320 nm, respectively. The action spectrum for .NO generation was found to overlap the optical absorption spectrum of SNP closely. A mechanism for the reaction between SNP and nitronyl nitroxide in the presence of light is proposed and computer-aided simulation of this mechanism using published rate constants agreed well with experimental data. The methodology described here may be used to assay .NO production continuously during photoactivation of .NO donors in aqueous and lipid environments. Biological implications of this methodology are discussed.
Collapse
Affiliation(s)
- R J Singh
- Biophysics Research Institute, Medical College of Wisconsin, Milwaukee 53226-0509, USA
| | | | | | | | | |
Collapse
|
23
|
Hogg N, Singh RJ, Joseph J, Neese F, Kalyanaraman B. Reactions of nitric oxide with nitronyl nitroxides and oxygen: prediction of nitrite and nitrate formation by kinetic simulation. Free Radic Res 1995; 22:47-56. [PMID: 7889147 DOI: 10.3109/10715769509147527] [Citation(s) in RCA: 63] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Nitric oxide reacts with nitronyl nitroxides (NNO) to form imino nitroxides (INO) and this transformation can be monitored using electron spin resonance spectroscopy. Recently, Akaike et al., reported that NNO such as 2-phenyl-4,4,5,5-tetramethylimidazoline-3-oxide-1-oxyl (PTIO) and its derivatives (e.g., carboxy-PTIO) react with nitric oxide (.NO) in a 1:1 stoichiometry forming 2-phenyl-4,4,5,5-tetramethylimidazoline-1-oxyl (PTI) or the respective product (e.g., carboxy-PTI) together with nitrite and nitrate (Akaike et al., Biochemistry 32, 827-332, 1993). In this paper, we reevaluate their results and show that the stoichiometry of the reaction between PTIO and .NO is 0.63 +/- 0.06:1.0. The reason for this discrepancy is due to an erroneous assumption by Akaike et al., that the stoichiometry for the reaction between .NO and O2 is 2:1 in aqueous solution. If the data reported by Akaike et al., were recalculated using a 4:1 stoichiometry established for the aqueous oxidation of .NO, the reaction between .NO and PTIO would give a stoichiometry of 0.5:1.0 in closer agreement with our data. We propose mechanism for the reaction between PTIO and .NO in aqueous solution. This mechanism predicts that the stoichiometry between carboxy-PTIO and .NO is dependent on the rate of generation of .NO and is 1:1 only at low rates of .NO generation (i.e., 10(-13) M/s). However the stoichiometry approaches 0.5:1.0 at higher rates of .NO production or when it is added as a bolus. The ratio between nitrite and nitrate also varies as a function of the rate of generation of .NO. The model agrees with previous experimental observations that the aqueous oxidation of .NO in air saturated solutions will exclusively form nitrite and predicts that .NO will only generate substantial amounts of nitrate if it is released at a rate less than 10(-17) M/s. This may have important consequences in cellular systems where the concentration of .NO is typically measured from nitrite production.
Collapse
Affiliation(s)
- N Hogg
- Biophysics Research Institute, Medical College of Wisconsin, Milwaukee 53226-0509
| | | | | | | | | |
Collapse
|