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Moran AL, Carter SP, Kaylor JJ, Jiang Z, Broekman S, Dillon ET, Gómez Sánchez A, Minhas SK, van Wijk E, Radu RA, Travis GH, Carey M, Blacque OE, Kennedy BN. Dawn and dusk peaks of outer segment phagocytosis, and visual cycle function require Rab28. FASEB J 2022; 36:e22309. [PMID: 35471581 PMCID: PMC9322422 DOI: 10.1096/fj.202101897r] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Revised: 03/14/2022] [Accepted: 03/29/2022] [Indexed: 12/12/2022]
Abstract
RAB28 is a farnesylated, ciliary G-protein. Patient variants in RAB28 are causative of autosomal recessive cone-rod dystrophy (CRD), an inherited human blindness. In rodent and zebrafish models, the absence of Rab28 results in diminished dawn, photoreceptor, outer segment phagocytosis (OSP). Here, we demonstrate that Rab28 is also required for dusk peaks of OSP, but not for basal OSP levels. This study further elucidated the molecular mechanisms by which Rab28 controls OSP and inherited blindness. Proteomic profiling identified factors whose expression in the eye or whose expression at dawn and dusk peaks of OSP is dysregulated by loss of Rab28. Notably, transgenic overexpression of Rab28, solely in zebrafish cones, rescues the OSP defect in rab28 KO fish, suggesting rab28 gene replacement in cone photoreceptors is sufficient to regulate Rab28-OSP. Rab28 loss also perturbs function of the visual cycle as retinoid levels of 11-cRAL, 11cRP, and atRP are significantly reduced in larval and adult rab28 KO retinae (p < .05). These data give further understanding on the molecular mechanisms of RAB28-associated CRD, highlighting roles of Rab28 in both peaks of OSP, in vitamin A metabolism and in retinoid recycling.
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Affiliation(s)
- Ailís L. Moran
- UCD School of Biomolecular and Biomedical ScienceUniversity College DublinDublinIreland
- UCD Conway InstituteUniversity College DublinDublinIreland
| | - Stephen P. Carter
- UCD School of Biomolecular and Biomedical ScienceUniversity College DublinDublinIreland
- UCD Conway InstituteUniversity College DublinDublinIreland
| | - Joanna J. Kaylor
- Department of OphthalmologyDavid Geffen School of MedicineUCLA Stein Eye InstituteUniversity of California Los AngelesLos AngelesCaliforniaUSA
| | - Zhichun Jiang
- Department of OphthalmologyDavid Geffen School of MedicineUCLA Stein Eye InstituteUniversity of California Los AngelesLos AngelesCaliforniaUSA
| | - Sanne Broekman
- Department of OtorhinolaryngologyRadboud University Medical CenterNijmegenThe Netherlands
- Donders Institute for Brain, Cognition, and BehaviorNijmegenThe Netherlands
| | | | - Alicia Gómez Sánchez
- UCD Conway InstituteUniversity College DublinDublinIreland
- Ocupharm Diagnostic Group ResearchFaculty of Optic and OptometryUniversidad Complutense de MadridMadridSpain
| | - Sajal K. Minhas
- UCD School of Mathematics & StatisticsUniversity College DublinDublinIreland
| | - Erwin van Wijk
- Department of OtorhinolaryngologyRadboud University Medical CenterNijmegenThe Netherlands
- Donders Institute for Brain, Cognition, and BehaviorNijmegenThe Netherlands
| | - Roxana A. Radu
- Department of OphthalmologyDavid Geffen School of MedicineUCLA Stein Eye InstituteUniversity of California Los AngelesLos AngelesCaliforniaUSA
| | - Gabriel H. Travis
- Department of OphthalmologyDavid Geffen School of MedicineUCLA Stein Eye InstituteUniversity of California Los AngelesLos AngelesCaliforniaUSA
- Department of Biological ChemistryUniversity of CaliforniaLos Angeles School of MedicineLos AngelesCaliforniaUSA
| | - Michelle Carey
- UCD School of Mathematics & StatisticsUniversity College DublinDublinIreland
| | - Oliver E. Blacque
- UCD School of Biomolecular and Biomedical ScienceUniversity College DublinDublinIreland
- UCD Conway InstituteUniversity College DublinDublinIreland
| | - Breandán N. Kennedy
- UCD School of Biomolecular and Biomedical ScienceUniversity College DublinDublinIreland
- UCD Conway InstituteUniversity College DublinDublinIreland
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2
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Ward R, Kaylor JJ, Cobice DF, Pepe DA, McGarrigle EM, Brockerhoff SE, Hurley JB, Travis GH, Kennedy BN. Non-photopic and photopic visual cycles differentially regulate immediate, early, and late phases of cone photoreceptor-mediated vision. J Biol Chem 2020; 295:6482-6497. [PMID: 32238432 DOI: 10.1074/jbc.ra119.011374] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2019] [Revised: 03/30/2020] [Indexed: 11/06/2022] Open
Abstract
Cone photoreceptors in the retina enable vision over a wide range of light intensities. However, the processes enabling cone vision in bright light (i.e. photopic vision) are not adequately understood. Chromophore regeneration of cone photopigments may require the retinal pigment epithelium (RPE) and/or retinal Müller glia. In the RPE, isomerization of all-trans-retinyl esters to 11-cis-retinol is mediated by the retinoid isomerohydrolase Rpe65. A putative alternative retinoid isomerase, dihydroceramide desaturase-1 (DES1), is expressed in RPE and Müller cells. The retinol-isomerase activities of Rpe65 and Des1 are inhibited by emixustat and fenretinide, respectively. Here, we tested the effects of these visual cycle inhibitors on immediate, early, and late phases of cone photopic vision. In zebrafish larvae raised under cyclic light conditions, fenretinide impaired late cone photopic vision, while the emixustat-treated zebrafish unexpectedly had normal vision. In contrast, emixustat-treated larvae raised under extensive dark-adaptation displayed significantly attenuated immediate photopic vision concomitant with significantly reduced 11-cis-retinaldehyde (11cRAL). Following 30 min of light, early photopic vision was recovered, despite 11cRAL levels remaining significantly reduced. Defects in immediate cone photopic vision were rescued in emixustat- or fenretinide-treated larvae following exogenous 9-cis-retinaldehyde supplementation. Genetic knockout of Des1 (degs1) or retinaldehyde-binding protein 1b (rlbp1b) did not eliminate photopic vision in zebrafish. Our findings define molecular and temporal requirements of the nonphotopic or photopic visual cycles for mediating vision in bright light.
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Affiliation(s)
- Rebecca Ward
- UCD School of Biomolecular and Biomedical Science, UCD Conway Institute, University College Dublin, Dublin D04 V1W8, Ireland
| | - Joanna J Kaylor
- Jules Stein Eye Institute, UCLA School of Medicine, Los Angeles, California 90095
| | - Diego F Cobice
- Mass Spectrometry Centre, School of Biomedical Sciences, Biomedical Sciences Research Institute, Ulster University, Coleraine BT52 1SA, Northern Ireland
| | - Dionissia A Pepe
- Centre for Synthesis and Chemical Biology, UCD School of Chemistry, University College Dublin, Dublin D04 V1W8, Ireland
| | - Eoghan M McGarrigle
- Centre for Synthesis and Chemical Biology, UCD School of Chemistry, University College Dublin, Dublin D04 V1W8, Ireland
| | - Susan E Brockerhoff
- Department of Biochemistry, University of Washington, Seattle, Washington 98109.,Department of Ophthalmology, University of Washington, Seattle, Washington 98109
| | - James B Hurley
- Department of Biochemistry, University of Washington, Seattle, Washington 98109.,Department of Ophthalmology, University of Washington, Seattle, Washington 98109
| | - Gabriel H Travis
- Jules Stein Eye Institute, UCLA School of Medicine, Los Angeles, California 90095.,Department of Biological Chemistry, UCLA School of Medicine, Los Angeles, California 90095
| | - Breandán N Kennedy
- UCD School of Biomolecular and Biomedical Science, UCD Conway Institute, University College Dublin, Dublin D04 V1W8, Ireland
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3
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Morshedian A, Kaylor JJ, Ng SY, Tsan A, Frederiksen R, Xu T, Yuan L, Sampath AP, Radu RA, Fain GL, Travis GH. Light-Driven Regeneration of Cone Visual Pigments through a Mechanism Involving RGR Opsin in Müller Glial Cells. Neuron 2019; 102:1172-1183.e5. [PMID: 31056353 PMCID: PMC6586478 DOI: 10.1016/j.neuron.2019.04.004] [Citation(s) in RCA: 65] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2019] [Revised: 03/20/2019] [Accepted: 03/29/2019] [Indexed: 11/18/2022]
Abstract
While rods in the mammalian retina regenerate rhodopsin through a well-characterized pathway in cells of the retinal pigment epithelium (RPE), cone visual pigments are thought to regenerate in part through an additional pathway in Müller cells of the neural retina. The proteins comprising this intrinsic retinal visual cycle are unknown. Here, we show that RGR opsin and retinol dehydrogenase-10 (Rdh10) convert all-trans-retinol to 11-cis-retinol during exposure to visible light. Isolated retinas from Rgr+/+ and Rgr-/- mice were exposed to continuous light, and cone photoresponses were recorded. Cones in Rgr-/- retinas lost sensitivity at a faster rate than cones in Rgr+/+ retinas. A similar effect was seen in Rgr+/+ retinas following treatment with the glial cell toxin, α-aminoadipic acid. These results show that RGR opsin is a critical component of the Müller cell visual cycle and that regeneration of cone visual pigment can be driven by light.
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Affiliation(s)
- Ala Morshedian
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Joanna J Kaylor
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Sze Yin Ng
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA; Department of Integrative Biology and Physiology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Avian Tsan
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Rikard Frederiksen
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Tongzhou Xu
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Lily Yuan
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Alapakkam P Sampath
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Roxana A Radu
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Gordon L Fain
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA; Department of Integrative Biology and Physiology, University of California, Los Angeles, Los Angeles, CA, USA
| | - Gabriel H Travis
- Stein Eye Institute and Department of Ophthalmology, University of California, Los Angeles, Los Angeles, CA, USA; Department of Biological Chemistry, University of California, Los Angeles, Los Angeles, CA, USA.
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Kaylor JJ, Xu T, Ingram NT, Tsan A, Hakobyan H, Fain GL, Travis GH. Blue light regenerates functional visual pigments in mammals through a retinyl-phospholipid intermediate. Nat Commun 2017; 8:16. [PMID: 28473692 PMCID: PMC5432035 DOI: 10.1038/s41467-017-00018-4] [Citation(s) in RCA: 39] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2016] [Accepted: 02/15/2017] [Indexed: 11/24/2022] Open
Abstract
The light absorbing chromophore in opsin visual pigments is the protonated Schiff base of 11-cis-retinaldehyde (11cRAL). Absorption of a photon isomerizes 11cRAL to all-trans-retinaldehyde (atRAL), briefly activating the pigment before it dissociates. Light sensitivity is restored when apo-opsin combines with another 11cRAL to form a new visual pigment. Conversion of atRAL to 11cRAL is carried out by enzyme pathways in neighboring cells. Here we show that blue (450-nm) light converts atRAL specifically to 11cRAL through a retinyl-phospholipid intermediate in photoreceptor membranes. The quantum efficiency of this photoconversion is similar to rhodopsin. Photoreceptor membranes synthesize 11cRAL chromophore faster under blue light than in darkness. Live mice regenerate rhodopsin more rapidly in blue light. Finally, whole retinas and isolated cone cells show increased photosensitivity following exposure to blue light. These results indicate that light contributes to visual-pigment renewal in mammalian rods and cones through a non-enzymatic process involving retinyl-phospholipids. It is currently thought that visual pigments in vertebrate photoreceptors are regenerated exclusively through enzymatic cycles. Here the authors show that mammalian photoreceptors also regenerate opsin pigments in light through photoisomerization of N-ret-PE (N-retinylidene-phosphatidylethanolamine.
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Affiliation(s)
- Joanna J Kaylor
- Jules Stein Eye Institute, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA
| | - Tongzhou Xu
- Jules Stein Eye Institute, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA.,Molecular, Cellular and Integrative Physiology Graduate Program, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA
| | - Norianne T Ingram
- Jules Stein Eye Institute, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA.,Molecular, Cellular and Integrative Physiology Graduate Program, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA
| | - Avian Tsan
- Jules Stein Eye Institute, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA
| | - Hayk Hakobyan
- Jules Stein Eye Institute, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA
| | - Gordon L Fain
- Jules Stein Eye Institute, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA.,Department of Integrative Biology and Physiology, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA
| | - Gabriel H Travis
- Jules Stein Eye Institute, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA. .,Department of Biological Chemistry, University of California Los Angeles School of Medicine, Los Angeles, California, 90095, USA.
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5
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Kaylor JJ, Radu RA, Bischoff N, Makshanoff J, Hu J, Lloyd M, Eddington S, Bianconi T, Bok D, Travis GH. Diacylglycerol O-acyltransferase type-1 synthesizes retinyl esters in the retina and retinal pigment epithelium. PLoS One 2015; 10:e0125921. [PMID: 25974161 PMCID: PMC4431840 DOI: 10.1371/journal.pone.0125921] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2014] [Accepted: 03/13/2015] [Indexed: 11/19/2022] Open
Abstract
Retinyl esters represent an insoluble storage form of vitamin A and are substrates for the retinoid isomerase (Rpe65) in cells of the retinal pigment epithelium (RPE). The major retinyl-ester synthase in RPE cells is lecithin:retinol acyl-transferase (LRAT). A second palmitoyl coenzyme A-dependent retinyl-ester synthase activity has been observed in RPE homogenates but the protein responsible has not been identified. Here we show that diacylglycerol O-acyltransferase-1 (DGAT1) is expressed in multiple cells of the retina including RPE and Müller glial cells. DGAT1 catalyzes the synthesis of retinyl esters from multiple retinol isomers with similar catalytic efficiencies. Loss of DGAT1 in dgat1 -/- mice has no effect on retinal anatomy or the ultrastructure of photoreceptor outer-segments (OS) and RPE cells. Levels of visual chromophore in dgat1 -/- mice were also normal. However, the normal build-up of all-trans-retinyl esters (all-trans-RE’s) in the RPE during the first hour after a deep photobleach of visual pigments in the retina was not seen in dgat1 -/- mice. Further, total retinyl-ester synthase activity was reduced in both dgat1 -/- retina and RPE.
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Affiliation(s)
- Joanna J. Kaylor
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
- * E-mail:
| | - Roxana A. Radu
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
| | - Nicholas Bischoff
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
| | - Jacob Makshanoff
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
| | - Jane Hu
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
| | - Marcia Lloyd
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
| | - Shannan Eddington
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
| | - Tran Bianconi
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
| | - Dean Bok
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
- Department of Neurobiology, University of California Los Angeles, Los Angeles, California, United States of America
| | - Gabriel H. Travis
- Jules Stein Eye Institute, University of California Los Angeles, Los Angeles, California, United States of America
- Department of Biological Chemistry, University of California Los Angeles, Los Angeles, California, United States of America
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6
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Kaylor JJ, Yuan Q, Cook J, Sarfare S, Makshanoff J, Miu A, Kim A, Kim P, Habib S, Roybal CN, Xu T, Nusinowitz S, Travis GH. Identification of DES1 as a vitamin A isomerase in Müller glial cells of the retina. Nat Chem Biol 2012; 9:30-6. [PMID: 23143414 PMCID: PMC3522777 DOI: 10.1038/nchembio.1114] [Citation(s) in RCA: 91] [Impact Index Per Article: 7.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2012] [Accepted: 10/05/2012] [Indexed: 11/21/2022]
Abstract
Absorption of a light particle by an opsin-pigment causes photoisomerization of its retinaldehyde chromophore. Restoration of light sensitivity to the resulting apo-opsin requires chemical re-isomerization of the photobleached chromophore. This is carried out by a multistep enzyme pathway called the visual cycle. Accumulating evidence suggests the existence of an alternate visual cycle for regenerating opsins in daylight. Here, we identified dihydroceramide desaturase-1 (DES1) as a retinol isomerase and an excellent candidate for isomerase-2 in this alternate pathway. DES1 is expressed in retinal Müller cells where it co-immunoprecipitates with cellular retinaldehyde binding protein (CRALBP). Adenoviral gene therapy with DES1 partially rescued the biochemical and physiological phenotypes in rpe65 −/− mice lacking isomerohydrolase (isomerase-1). Knockdown of DES1 expression by RNA-interference concordantly reduced isomerase-2 activity in cultured Müller cells. Purified DES1 possessed very high isomerase-2 activity in the presence of appropriate cofactors, suggesting that DES1 by itself is sufficient for isomerase activity.
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Affiliation(s)
- Joanna J Kaylor
- Jules Stein Eye Institute, University of California, Los Angeles School of Medicine, Los Angeles, California, USA
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7
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Yuan Q, Kaylor JJ, Miu A, Bassilian S, Whitelegge JP, Travis GH. Rpe65 isomerase associates with membranes through an electrostatic interaction with acidic phospholipid headgroups. J Biol Chem 2009; 285:988-99. [PMID: 19892706 DOI: 10.1074/jbc.m109.025643] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
Opsins are light-sensitive pigments in the vertebrate retina, comprising a G protein-coupled receptor and an 11-cis-retinaldehyde chromophore. Absorption of a photon by an opsin pigment induces isomerization of its chromophore to all-trans-retinaldehyde. After a brief period of activation, opsin releases all-trans-retinaldehyde and becomes insensitive to light. Restoration of light sensitivity to the apo-opsin involves the conversion of all-trans-retinaldehyde back to 11-cis-retinaldehyde via an enzyme pathway called the visual cycle. The critical isomerization step in this pathway is catalyzed by Rpe65. Rpe65 is strongly associated with membranes but contains no membrane-spanning segments. It was previously suggested that the affinity of Rpe65 for membranes is due to palmitoylation of one or more Cys residues. In this study, we re-examined this hypothesis. By two independent strategies involving mass spectrometry, we show that Rpe65 is not palmitoylated nor does it appear to undergo other post-translational modifications at significant stoichiometry. Instead, we show that Rpe65 binds the acidic phospholipids, phosphatidylserine, phosphatidylglycerol, and cardiolipin, but not phosphatidic acid. No binding of Rpe65 to basic phospholipids or neutral lipids was observed. The affinity of Rpe65 to acidic phospholipids was strongly pH-dependent, suggesting an electrostatic interaction of basic residues in Rpe65 with negatively charged phospholipid headgroups. Binding of Rpe65 to liposomes containing phosphatidylserine or phosphatidylglycerol, but not the basic or neutral phospholipids, allowed the enzyme to extract its insoluble substrate, all-trans-retinyl palmitate, from the lipid bilayer for synthesis of 11-cis-retinol. The interaction of Rpe65 with acidic phospholipids is therefore biologically relevant.
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Affiliation(s)
- Quan Yuan
- Jules Stein Eye Institute, UCLA School of Medicine, Los Angeles, California 90095, USA
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8
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Risley JM, Huang DH, Kaylor JJ, Malik JJ, Xia YQ. Glycosylasparaginase inhibition studies: competitive inhibitors, transition state mimics, noncompetitive inhibitors. Journal of Enzyme Inhibition 2002; 16:269-74. [PMID: 11697047 DOI: 10.1080/14756360109162375] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Abstract
Glycosylasparaginase catalyzes the hydrolysis of the N-glycosylic bond between asparagine and N-acetylglucosamine in the catabolism of N-linked glycoproteins. Previously only three competitive inhibitors, one noncompetitive inhibitor, and one irreversible inhibitor of glycosylasparaginase activity had been reported. Using human glycosylasparaginase from human amniotic fluid, L-aspartic acid and four of its analogues, where the alpha-amino group was substituted with a chloro, bromo, methyl or hydrogen, were competitive inhibitors having Ki values between 0.6-7.7 mM. These results provide supporting evidence for a proposed intramolecular autoproteolytic activation reaction. A proposed phosphono transition state mimic and a sulfo transition state mimic were competitive inhibitors with Ki values 0.9 mM and 1.4 mM, respectively. These results support a mechanism for the enzyme-catalyzed reaction involving formation of a tetrahedral high-energy intermediate. Three analogues of the natural substrate were noncompetitive inhibitors with Ki values between 0.56-0.75 mM, indicating the presence of a second binding site that may recognize (substituted)acetamido groups.
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Affiliation(s)
- J M Risley
- Department of Chemistry, University of North Carolina at Charlotte, Charlotte, NC 28223, USA.
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9
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Risley JM, Huang DH, Kaylor JJ, Malik JJ, Xia YQ, York WM. Glycosylasparaginase activity requires the alpha-carboxyl group, but not the alpha-amino group, on N(4)-(2-Acetamido-2-deoxy-beta-D-glucopyranosyl)-L-asparagine. Arch Biochem Biophys 2001; 391:165-70. [PMID: 11437347 DOI: 10.1006/abbi.2001.2416] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Glycosylasparaginase catalyzes the hydrolysis of the N-glycosylic bond in N(4)-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-asparagine in the catabolism of N-linked oligosaccharides. A deficiency, or absence, of enzyme activity gives rise to aspartylglycosaminuria, the most common disorder of glycoprotein metabolism. The enzyme catalyzes the hydrolysis of a variety of asparagine and aspartyl compounds containing a free alpha-carboxyl group and a free alpha-amino group; computational studies suggest that the alpha-amino group actively participates in the catalytic mechanism. In order to study the importance of the alpha-carboxyl group and the alpha-amino group on the natural substrate to the reaction catalyzed by the enzyme, 14 analogues of the natural substrate were studied where the structure of the aspartyl group of the substrate was changed. The incremental binding energy (DeltaDeltaGb) for those analogues that were substrates was calculated. The results show that the alpha-amino group may be substituted with a group of comparable size, for the alpha-amino group contributes little, if any, to the transition state binding energy of the natural substrate. The alpha-amino group position acts as an "anchor" in the binding site for the substrate. On the other hand, the alpha-carboxyl group is necessary for enzyme activity; removal of the alpha-carboxyl group or changing it to an alpha-carboxamide group results in no hydrolysis reaction. Also, N-acetyl-D-glucosamine is not sufficient for binding to the active site for efficient hydrolysis by the enzyme. These results provide supporting evidence for a proposed intramolecular autoproteolytic activation reaction for the enzyme. However, the results raise a question as to an important role for the alpha-amino group in the catalytic mechanism as indicated in computational studies.
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Affiliation(s)
- J M Risley
- Department of Chemistry, The University of North Carolina at Charlotte, Charlotte, North Carolina 28223, USA.
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10
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Kaylor JJ, Risley JM. Synthesis of N4-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-asparagine analogues. n-Butyramide, 3-chloropropionamide, 3-aminopropionamide, and isovaleramide analogues. Carbohydr Res 2001; 331:439-44. [PMID: 11398986 DOI: 10.1016/s0008-6215(01)00057-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The syntheses of four analogues of N4-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-L-asparagine are described. Activated carboxylic acids were reacted with 2-acetamido-2-deoxy-beta-D-glucopyranosylamine. n-Butyric anhydride gave N-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-n-butyramide. 3-Chloropropionic anhydride was synthesized from 3-chloropropionic acid and gave N-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-3-chloropropionamide. Equilibration of the latter with ammonium bicarbonate gave N1-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-3-aminopropionamide. Succinimidyl isovalerate was synthesized and gave N-(2-acetamido-2-deoxy-beta-D-glucopyranosyl)-isovaleramide.
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Affiliation(s)
- J J Kaylor
- Department of Chemistry, The University of North Carolina at Charlotte, 28223-0001, USA
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