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Joshua C Cofsky

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Adler BA, Trinidad MI, Bellieny-Rabelo D, Zhang E, Karp HM, Skopintsev P, Thornton BW, Weissman RF, Yoon P, Chen L, Hessler T, Eggers AR, Colognori D, Boger R, Doherty EE, Tsuchida CA, Tran RV, Hofman L, Shi H, Wasko KM, Zhou Z, Xia C, Al-Shimary MJ, Patel JR, Thomas VCJX, Pattali R, Kan MJ, Vardapetyan A, Yang A, Lahiri A, Maxwell MF, Murdock AG, Ramit GC, Henderson HR, Calvert RW, Bamert R, Knott GJ, Lapinaite A, Pausch P, Cofsky J, Sontheimer EJ, Wiedenheft B, Fineran PC, Brouns SJJ, Sashital DG, Thomas BC, Brown CT, Goltsman DSA, Barrangou R, Siksnys V, Banfield JF, Savage DF, Doudna JA. CasPEDIA Database: a functional classification system for class 2 CRISPR-Cas enzymes. Nucleic Acids Res 2024;52:D590-D596. [PMID: 37889041 PMCID: PMC10767948 DOI: 10.1093/nar/gkad890] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2023] [Revised: 09/29/2023] [Accepted: 10/04/2023] [Indexed: 10/28/2023] Open

Affiliation(s)

Benjamin A Adler Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA
Marena I Trinidad Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Howard Hughes Medical Institute, University of California, Berkeley, CA 94720, USA
Daniel Bellieny-Rabelo Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA
Elaine Zhang Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Howard Hughes Medical Institute, University of California, Berkeley, CA 94720, USA
Hannah M Karp Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Chemistry, University of California, Berkeley, CA 94720, USA
Petr Skopintsev Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA
Brittney W Thornton Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Rachel F Weissman Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Peter H Yoon Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
LinXing Chen Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Earth and Planetary Sciences, University of California, Berkeley, CA 94720, USA
Tomas Hessler Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Earth and Planetary Sciences, University of California, Berkeley, CA 94720, USA Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA 94720, USA EGSB Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA
Amy R Eggers Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
David Colognori Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Ron Boger Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA
Erin E Doherty Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA
Connor A Tsuchida Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA University of California, Berkeley - University of California, San Francisco Graduate Program in Bioengineering, University of California, Berkeley, Berkeley, CA 94720, USA
Ryan V Tran Department of Chemistry, University of California, Berkeley, CA 94720, USA
Laura Hofman Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA Graduate School of Life Sciences, Utrecht University, 3584 CS Utrecht, UT, The Netherlands
Honglue Shi Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Howard Hughes Medical Institute, University of California, Berkeley, CA 94720, USA
Kevin M Wasko Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Zehan Zhou Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Chenglong Xia Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA
Muntathar J Al-Shimary Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Jaymin R Patel Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA
Vienna C J X Thomas Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Chemistry, University of California, Berkeley, CA 94720, USA
Rithu Pattali Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Matthew J Kan Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Pediatrics, Division of Allergy, Immunology, and Bone Marrow Transplantation, University of California, San Francisco, CA 94158, USA
Anna Vardapetyan Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA
Alana Yang Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Arushi Lahiri Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Micaela F Maxwell Department of Chemistry and Biochemistry, Hampton University, Hampton, VA 23668, USA
Andrew G Murdock Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA
Glenn C Ramit Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA
Hope R Henderson Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA
Roland W Calvert Monash Biomedicine Discovery Institute, Department of Biochemistry and Molecular Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton, VIC 3168, Australia
Rebecca S Bamert Monash Biomedicine Discovery Institute, Department of Biochemistry and Molecular Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton, VIC 3168, Australia
Gavin J Knott Monash Biomedicine Discovery Institute, Department of Biochemistry and Molecular Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton, VIC 3168, Australia
Audrone Lapinaite School of Molecular Sciences, Arizona State University, Tempe, AZ 85281, USA Arizona State University-Banner Neurodegenerative Disease Research Center at the Biodesign Institute, Arizona State University, Tempe, AZ 85281, USA Center for Molecular Design and Biomimetics, The Biodesign Institute, Arizona State University, Tempe, AZ 85281, USA
Patrick Pausch LSC-EMBL Partnership Institute for Genome Editing Technologies, Life Sciences Center, Vilnius University, Vilnius 10257, Lithuania
Joshua C Cofsky Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA
Erik J Sontheimer RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA Program in Molecular Medicine, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA Li Weibo Institute for Rare Diseases Research, University of Massachusetts Chan Medical School, Worcester, MA 01655, USA
Blake Wiedenheft Department of Microbiology and Cell Biology, Montana State University, Bozeman, MT 59717, USA
Peter C Fineran Department of Microbiology and Immunology, University of Otago, Dunedin 9016, New Zealand Genetics Otago, University of Otago, Dunedin 9016, New Zealand Bioprotection Aotearoa, University of Otago, Dunedin 9016, New Zealand Maurice Wilkins Centre for Molecular Biodiscovery, University of Otago, Dunedin 9016, New Zealand
Stan J J Brouns Department of Bionanoscience, Delft University of Technology, 2629 HZ Delft, Netherlands Kavli Institute of Nanoscience, 2629 HZ Delft, The Netherlands
Dipali G Sashital Roy J. Carver Department of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, IA 50011, USA
Brian C Thomas Metagenomi, Inc., Emeryville, CA 94608, USA
Christopher T Brown Metagenomi, Inc., Emeryville, CA 94608, USA
Daniela S A Goltsman Metagenomi, Inc., Emeryville, CA 94608, USA
Rodolphe Barrangou Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Food, Bioprocessing and Nutrition Sciences, North Carolina State University, Raleigh, NC 27606, USA
Virginius Siksnys Institute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius 10257, Lithuania
Jillian F Banfield Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Department of Earth and Planetary Sciences, University of California, Berkeley, CA 94720, USA Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA 94720, USA EGSB Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA The University of Melbourne, Parkville, VIC 3052, Australia
David F Savage Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA Howard Hughes Medical Institute, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA
Jennifer A Doudna Innovative Genomics Institute, University of California, Berkeley, CA 94720, USA California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, CA 94720, USA Howard Hughes Medical Institute, University of California, Berkeley, CA 94720, USA Department of Chemistry, University of California, Berkeley, CA 94720, USA Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720, USA MBIB Division, Lawrence Berkeley National Laboratory, Berkeley, CA 94720, USA Gladstone Institutes, University of California, San Francisco, CA 94158, USA

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Shipley JE, Kupfer DJ, Spiker DG, Shaw DH, Coble PA, Neil JF, Cofsky J. Neuropsychological assessment and EEG sleep in affective disorders. Biol Psychiatry 1981;16:907-18. [PMID: 7306613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Grants] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]

Spiker DG, Coble P, Cofsky J, Foster FG, Kupfer DJ. EEG sleep and severity of depression. Biol Psychiatry 1978;13:485-8. [PMID: 210851] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]