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Rasking L, Koshy P, Bongaerts E, Bové H, Ameloot M, De Vusser K, Nawrot T. P11-11 Black carbon reaches the kidneys. Toxicol Lett 2022. [DOI: 10.1016/j.toxlet.2022.07.461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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2
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Ghosh M, Öner D, Bové H, Moisse M, Boeckx B, Duca R, Vanoirbeek J, Ameloot M, Bekaert B, Lambrechts D, Godderis L, Hoet P. Single-walled and multi-walled carbon nanotubes induce epigenetic alterations in association with the nuclear deposition in 16 HBE cells. Toxicol Lett 2018. [DOI: 10.1016/j.toxlet.2018.06.918] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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3
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Knippenberg S, Fabre G, Osella S, Di Meo F, Paloncýová M, Ameloot M, Trouillas P. Atomistic Picture of Fluorescent Probes with Hydrocarbon Tails in Lipid Bilayer Membranes: An Investigation of Selective Affinities and Fluorescent Anisotropies in Different Environmental Phases. Langmuir 2018; 34:9072-9084. [PMID: 29983063 DOI: 10.1021/acs.langmuir.8b01164] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
By reverting to spectroscopy, changes in the biological environment of a fluorescent probe can be monitored and the presence of various phases of the surrounding lipid bilayer membranes can be detected. However, it is currently not always clear in which phase the probe resides. The well-known orange 1,1'-dioctadecyl-3,3,3',3'-tetramethylindodicarbo-cyanine perchlorate (DiI-C18(5)) fluorophore, for instance, and the new, blue BODIPY (4,4-difluoro-4-bora-3 a,4 a-diaza- s-indacene) derivative were experimentally seen to target and highlight identical parts of giant unilamellar vesicles of various compositions, comprising mixtures of dipalmitoylphosphatidylcholine (DPPC), dioleoylphosphatidylcholine (DOPC), sphingomyelin (SM), and cholesterol (Chol). However, it was not clear which of the coexisting membrane phases were visualized (Bacalum et al., Langmuir. 2016, 32, 3495). The present study addresses this issue by utilizing large-scale molecular dynamics simulations and the z-constraint method, which allows evaluating Gibbs free-energy profiles. The current calculations give an indication why, at room temperature, both BODIPY and DiI-C18(5) probes prefer the gel (So) phase in DOPC/DPPC (2:3 molar ratio) and the liquid-ordered (Lo) phase in DOPC/SM/Chol (1:2:1 molar ratio) mixtures. This study highlights the important differences in orientation and location and therefore in efficiency between the probes when they are used in fluorescence microscopy to screen various lipid bilayer membrane phases. Dependent on the lipid composition, the angle between the transition-state dipole moments of both probes and the normal to the membrane is found to deviate clearly from 90°. It is seen that the DiI-C18(5) probe is located in the headgroup region of the SM/Chol mixture, in close contact with water molecules. A fluorescence anisotropy study also indicates that DiI-C18(5) gives rise to a distinctive behavior in the SM/Chol membrane compared to the other considered membranes. The latter behavior has not been seen for the studied BODIPY probe, which is located deeper in the membrane.
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Affiliation(s)
- S Knippenberg
- Department of Theoretical Chemistry and Biology , KTH Royal Institute of Technology , Roslagstullsbacken 15 , S-106 91 Stockholm , Sweden
- Biomedical Research Institute , Hasselt University , Agoralaan Building C , 3590 Diepenbeek , Belgium
| | - G Fabre
- LCSN-EA1069, Faculty of Pharmacy , Limoges University , 2 rue du Dr. Marcland , 87025 Limoges Cedex , France
| | - S Osella
- Centre of New Technologies , University of Warsaw , Banacha 2C , 02-097 Warsaw , Poland
| | - F Di Meo
- Faculty of Pharmacy , INSERM UMR 1248, Limoges University , 2 rue du Docteur Marcland , 87025 Limoges Cedex , France
| | - M Paloncýová
- Department of Theoretical Chemistry and Biology , KTH Royal Institute of Technology , Roslagstullsbacken 15 , S-106 91 Stockholm , Sweden
| | - M Ameloot
- Biomedical Research Institute , Hasselt University , Agoralaan Building C , 3590 Diepenbeek , Belgium
| | - P Trouillas
- Faculty of Pharmacy , INSERM UMR 1248, Limoges University , 2 rue du Docteur Marcland , 87025 Limoges Cedex , France
- Centre of Advanced Technologies and Materials, Faculty of Science , Palacký University , tř. 17 listopadu 12 , 771 46 Olomouc , Czech Republic
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Valev VK, Baumberg JJ, De Clercq B, Braz N, Zheng X, Osley EJ, Vandendriessche S, Hojeij M, Blejean C, Mertens J, Biris CG, Volskiy V, Ameloot M, Ekinci Y, Vandenbosch GAE, Warburton PA, Moshchalkov VV, Panoiu NC, Verbiest T. Nonlinear superchiral meta-surfaces: tuning chirality and disentangling non-reciprocity at the nanoscale. Adv Mater 2014; 26:4074-81. [PMID: 24740481 PMCID: PMC4173128 DOI: 10.1002/adma.201401021] [Citation(s) in RCA: 40] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2014] [Indexed: 05/27/2023]
Abstract
Circularly polarized light is incident on a nanostructured chiral meta-surface. In the nanostructured unit cells whose chirality matches that of light, superchiral light is forming and strong optical second harmonic generation can be observed.
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Affiliation(s)
- V K Valev
- NanoPhotonics Centre, Cavendish Laboratory Department of Physics University of CambridgeJ. J. Thomson Avenue Cambridge CB3 0HE, UK E-mail:
| | - J J Baumberg
- NanoPhotonics Centre, Cavendish Laboratory Department of Physics University of CambridgeJ. J. Thomson Avenue Cambridge CB3 0HE, UK E-mail:
| | - B De Clercq
- University Hasselt and transnational University LimburgBIOMED, Diepenbeek, Belgium
| | - N Braz
- Electrical Engineering University College London Torrington PlaceLondon WC1E 7JE, UK
| | - X Zheng
- ESAT-TELEMIC, KU LeuvenB-3001, Leuven, Belgium
| | - E J Osley
- Electrical Engineering University College London Torrington PlaceLondon WC1E 7JEUK London Centre for Nanotechnology University College London17–19 Gordon St, London WC1H 0AH, UK
| | | | - M Hojeij
- Laboratory for Micro and Nanotechnology Paul Scherrer Institute5232, Villigen-PS, Switzerland
| | - C Blejean
- NanoPhotonics Centre, Cavendish Laboratory Department of Physics University of CambridgeJ. J. Thomson Avenue Cambridge CB3 0HE, UK E-mail:
| | - J Mertens
- NanoPhotonics Centre, Cavendish Laboratory Department of Physics University of CambridgeJ. J. Thomson Avenue Cambridge CB3 0HE, UK E-mail:
| | - C G Biris
- Department of Physics West University of Timisoara B-dul Vasile ParvanNr. 4, Timisoara, 300223, Timis, Romania
| | - V Volskiy
- ESAT-TELEMIC, KU LeuvenB-3001, Leuven, Belgium
| | - M Ameloot
- University Hasselt and transnational University LimburgBIOMED, Diepenbeek, Belgium
| | - Y Ekinci
- Laboratory for Micro and Nanotechnology Paul Scherrer Institute5232, Villigen-PS, Switzerland
| | | | - P A Warburton
- Electrical Engineering University College London Torrington PlaceLondon WC1E 7JEUK London Centre for Nanotechnology University College London17–19 Gordon St, London WC1H 0AH, UK
| | - V V Moshchalkov
- Nanoscale Superconductivity and Magnetism & Pulsed Fields Group INPAC, KU LeuvenCelestijnenlaan 200 D B-3001, Leuven, Belgium
| | - N C Panoiu
- Electrical Engineering, University College London Torrington PlaceLondon WC1E 7JE, UKThomas Young Centre London Centre for Nanotechnology University College London17–19 Gordon St, London, WC1H 0AH, UK
| | - T Verbiest
- Molecular Electronics and PhotonicsKU Leuven BE-3001, Belgium
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5
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Valev VK, De Clercq B, Biris CG, Zheng X, Vandendriessche S, Hojeij M, Denkova D, Jeyaram Y, Panoiu NC, Ekinci Y, Silhanek AV, Volskiy V, Vandenbosch GAE, Ameloot M, Moshchalkov VV, Verbiest T. Distributing the optical near-field for efficient field-enhancements in nanostructures. Adv Mater 2012; 24:OP208-OP272. [PMID: 22761007 DOI: 10.1002/adma.201201151] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2012] [Indexed: 06/01/2023]
Affiliation(s)
- V K Valev
- Molecular Electronics and Photonics, INPAC, Katholieke Universiteit Leuven, BE-3001, Belgium.
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6
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Valev VK, Clercq BD, Zheng X, Denkova D, Osley EJ, Vandendriessche S, Silhanek AV, Volskiy V, Warburton PA, Vandenbosch GAE, Ameloot M, Moshchalkov VV, Verbiest T. The role of chiral local field enhancements below the resolution limit of Second Harmonic Generation microscopy. Opt Express 2012; 20:256-264. [PMID: 22274348 DOI: 10.1364/oe.20.000256] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
While it has been demonstrated that, above its resolution limit, Second Harmonic Generation (SHG) microscopy can map chiral local field enhancements, below that limit, structural defects were found to play a major role. Here we show that, even below the resolution limit, the contributions from chiral local field enhancements to the SHG signal can dominate over those by structural defects. We report highly homogeneous SHG micrographs of star-shaped gold nanostructures, where the SHG circular dichroism effect is clearly visible from virtually every single nanostructure. Most likely, size and geometry determine the dominant contributions to the SHG signal in nanostructured systems.
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Affiliation(s)
- V K Valev
- Molecular Electronics and Photonics, INPAC, Katholieke Universiteit Leuven, Celestijnenlaan 200 D, B-3001 Leuven, Belgium.
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7
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Valev VK, Silhanek AV, Jeyaram Y, Denkova D, De Clercq B, Petkov V, Zheng X, Volskiy V, Gillijns W, Vandenbosch GAE, Aktsipetrov OA, Ameloot M, Moshchalkov VV, Verbiest T. Hotspot decorations map plasmonic patterns with the resolution of scanning probe techniques. Phys Rev Lett 2011; 106:226803. [PMID: 21702624 DOI: 10.1103/physrevlett.106.226803] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2011] [Revised: 03/23/2011] [Indexed: 05/31/2023]
Abstract
In high definition mapping of the plasmonic patterns on the surfaces of nanostructures, the diffraction limit of light remains an important obstacle. Here we demonstrate that this diffraction limit can be completely circumvented. We show that upon illuminating nanostructures made of nickel and palladium, the resulting surface-plasmon pattern is imprinted on the structures themselves; the hotspots (regions of local field enhancement) are decorated with overgrowths, allowing for their subsequent imaging with scanning-probe techniques. The resulting resolution of plasmon pattern imaging is correspondingly improved.
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Affiliation(s)
- V K Valev
- Molecular Electronics and Photonics, INPAC, Katholieke Universiteit Leuven, Leuven, Belgium.
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van Grinsven B, Vanden Bon N, Grieten L, Murib M, Janssens SD, Haenen K, Schneider E, Ingebrandt S, Schöning MJ, Vermeeren V, Ameloot M, Michiels L, Thoelen R, De Ceuninck W, Wagner P. Rapid assessment of the stability of DNA duplexes by impedimetric real-time monitoring of chemically induced denaturation. Lab Chip 2011; 11:1656-1663. [PMID: 21448492 DOI: 10.1039/c1lc20027e] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
In this article, we report on the electronic monitoring of DNA denaturation by NaOH using electrochemical impedance spectroscopy in combination with fluorescence imaging as a reference technique. The probe DNA consisting of a 36-mer fragment was covalently immobilized on nanocrystalline-diamond electrodes and hybridized with different types of 29-mer target DNA (complementary, single-nucleotide defects at two different positions, and a non-complementary random sequence). The mathematical separation of the impedimetric signals into the time constant for NaOH exposure and the intrinsic denaturation-time constants gives clear evidence that the denaturation times reflect the intrinsic stability of the DNA duplexes. The intrinsic time constants correlate with calculated DNA-melting temperatures. The impedimetric method requires minimal instrumentation, is label-free and fast with a typical time scale of minutes and is highly reproducible. The sensor electrodes can be used repetitively. These elements suggest that the monitoring of chemically induced denaturation at room temperature is an interesting approach to measure DNA duplex stability as an alternative to thermal denaturation at elevated temperatures, used in DNA-melting experiments and single nucleotide polymorphism (SNP) analysis.
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Affiliation(s)
- B van Grinsven
- Hasselt University, Institute for Materials Research, Wetenschapspark 1, B-3590, Diepenbeek, Belgium.
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Valev VK, Silhanek AV, Smisdom N, De Clercq B, Gillijns W, Aktsipetrov OA, Ameloot M, Moshchalkov VV, Verbiest T. Linearly polarized second harmonic generation microscopy reveals chirality. Opt Express 2010; 18:8286-8293. [PMID: 20588674 DOI: 10.1364/oe.18.008286] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
Abstract
In optics, chirality is typically associated with circularly polarized light. Here we present a novel way to detect the handedness of chiral materials with linearly polarized light. We performed Second Harmonic Generation (SHG) microscopy on G-shaped planar chiral nanostructures made of gold. The SHG response originates in distinctive hotspots, whose arrangement is dependent of the handedness. These results uncover new directions for studying chirality in artificial materials.
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10
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Valev VK, Smisdom N, Silhanek AV, De Clercq B, Gillijns W, Ameloot M, Moshchalkov VV, Verbiest T. Plasmonic ratchet wheels: switching circular dichroism by arranging chiral nanostructures. Nano Lett 2009; 9:3945-8. [PMID: 19863052 DOI: 10.1021/nl9021623] [Citation(s) in RCA: 92] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
We demonstrate circular dichroism (CD) in the second harmonic generation (SHG) signal from chiral assemblies of G-shaped nanostructures made of gold. The arrangement of the G shapes is crucial since upon reordering them the SHG-CD effect disappears. Microscopy reveals SHG "hotspots" assemblies, which originate in enantiomerically sensitive plasmon modes, having the novel property of exhibiting a chiral geometry themselves in relation with the handedness of the material. These results open new frontiers in studying chirality.
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Affiliation(s)
- V K Valev
- Molecular Electronics and Photonics, INPAC, Katholieke Universiteit Leuven, Celestijnenlaan 200 D, B-3001 Leuven, Belgium.
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11
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vandeVen M, Gielen E, De Clercq B, Smisdom N, Ameloot M. Raster Image Correlation Spectroscopy (RICS) with One Photon Excitation and Analog Detection: Some Practical Considerations for GUVs and Cell Membranes. Biophys J 2009. [DOI: 10.1016/j.bpj.2008.12.068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022] Open
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Vermeeren V, Wenmackers S, Daenen M, Haenen K, Williams OA, Ameloot M, Vande Ven M, Wagner P, Michiels L. Topographical and functional characterization of the ssDNA probe layer generated through EDC-mediated covalent attachment to nanocrystalline diamond using fluorescence microscopy. Langmuir 2008; 24:9125-9134. [PMID: 18627188 DOI: 10.1021/la800946v] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
The covalent attachment method for DNA on nanocrystalline diamond (NCD), involving the introduction of COOH functionalities on the surface by photoattachment of 10-undecenoic acid (10-UDA), followed by the 1-ethyl-3-(3-dimethylaminopropyl)-carbodiimide (EDC)-mediated coupling to NH 2-labeled ssDNA, is evaluated in terms of stability, density, and functionality of the resulting biological interface. This is of crucial importance in DNA biosensor development. The covalent nature of DNA attachment will infer the necessary stability and favorable orientation to the ssDNA probe molecules. Using confocal fluorescence microscopy, the influence of buffer type for the removal of excess 10-UDA and ssDNA, the probe ssDNA length, the probe ssDNA concentration, and the presence of the COOH-linker on the density and functionality of the ssDNA probe layer were investigated. It was determined that the most homogeneously dense and functional DNA layer was obtained when 300 pmol of short ssDNA was applied to COOH-modified NCD samples, while H-terminated NCD was resistant for DNA attachment. Exploiting this surface functionality dependence of the DNA attachment efficiency, a shadow mask was applied during the photochemical introduction of the COOH-functionalities, leaving certain regions on the NCD H-terminated. The subsequent DNA attachment resulted in a fluorescence pattern corresponding to the negative of the shadow mask. Finally, NCD surfaces covered with mixtures of the 10-UDA linker molecule and a similar molecule lacking the COOH functionality, functioning as a lateral spacer, were examined for their suitability in preventing nonspecific adsorption to the surface and in decreasing steric hindrance. However, purely COOH-modified NCD samples, patterned with H-terminated regions and treated with a controlled amount of probe DNA, proved the most efficient in fulfilling these tasks.
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Affiliation(s)
- V Vermeeren
- Biomedical Research Institute, School for Life Sciences, Hasselt University and transnationale Universiteit Limburg, Agoralaan, Diepenbeek, Belgium
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13
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Jans F, Ameloot M, Wouters P, Steels P. Na-P(i) cotransporter type I activity causes a transient intracellular alkalinization during ATP depletion in rabbit medullary thick ascending limb cells. Can J Physiol Pharmacol 2008; 86:36-45. [PMID: 18418445 DOI: 10.1139/y07-114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
The cellular pathophysiology of renal ischemia-reperfusion injury was investigated in primary cell cultures from rabbit medullary thick ascending limb (MTAL). Metabolic inhibition (MI) was achieved with cyanide and 2-deoxyglucose. Sixty minutes of MI caused a profound but reversible decrease in intracellular concentration of ATP ([ATP]i). Intracellular pH (pHi) first decreased after initiation of MI, followed by a transient alkalinization. When [ATP]i reached its lowest value (<1% of control), the cells slowly acidified to reach a stable pHi of 6.92 after 50 min of MI. In the presence of EIPA (10 micromol/L), the pattern of changes in pHi was unchanged and acidification was not increased, indicating that the Na+/H+ exchangers were inactive during ATP depletion. When inorganic phosphate (P(i)) or Na+ was omitted from the apical solutions during MI, the transient alkalinization was no longer observed and the cytosol slowly acidified. Experiments on Na+-dependent alkalinizations revealed the presence of a Na-P(i) cotransporter in the apical cell membrane. With indirect immunofluorescence, the Na-P(i) cotransporter expressed in these primary cell cultures could be identified as Na-P(i) type I. Although the exact physiological role of Na-P(i) type I still is unresolved, these experiments demonstrate that apical Na-P(i) type I activity is increased at the onset of ATP depletion in MTAL cells.
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Affiliation(s)
- F Jans
- Department of Physiology, Biomedical Research Institute, University of Hasselt, Diepenbeek, Belgium.
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Vermeeren V, Bijnens N, Wenmackers S, Daenen M, Haenen K, Williams OA, Ameloot M, vandeVen M, Wagner P, Michiels L. Towards a real-time, label-free, diamond-based DNA sensor. Langmuir 2007; 23:13193-13202. [PMID: 18004892 DOI: 10.1021/la702143d] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/25/2023]
Abstract
Most challenging in the development of DNA sensors is the ability to distinguish between fully complementary target ssDNA (single-strand DNA) and 1-mismatch ssDNA. To deal with this problem, we performed impedance spectroscopy on DNA-functionalized nanocrystalline diamond (NCD) layers during hybridization and denaturation. In both reactions, a difference in behavior was observed for 1-mismatch target DNA and complementary target DNA in real-time. During real-time hybridization, a decrease of the impedance was observed at lower frequencies when the complementary target DNA was added, while the addition of 1-mismatch target ssDNA caused no significant change. Fitting these results to an electrical circuit demonstrates that this is correlated with a decrease of the depletion zone in the space charge region of the diamond. During real-time denaturation, differentiation between 1-mismatch and complementary target DNA was possible at higher frequencies. Denaturation of complementary DNA showed the longest exponential decay time of the impedance, while the decay time during 1-mismatch denaturation was the shortest. The real-time hybridization and denaturation experiments were carried out on different NCD samples in various buffer solutions at temperatures between 20 and 80 degrees C. It was revealed that the best results were obtained using a Microhyb hybridization buffer at 80 degrees C and 10x PCR buffer at 30 degrees C for hybridization and 0.1 M NaOH at temperatures above 40 degrees C for denaturation. We demonstrate that the combination of real-time hybridization spectra and real-time denaturation spectra yield important information on the type of target. This approach may allow a reliable identification of the mismatch sequence, which is the most biologically relevant.
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Affiliation(s)
- V Vermeeren
- Hasselt University and Transnationale Universiteit Limburg, School for Life Sciences, Biomedical Research Institute, Agoralaan, Building A, B-3590 Diepenbeek, Belgium
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15
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Christiaens P, Vermeeren V, Wenmackers S, Daenen M, Haenen K, Nesládek M, vandeVen M, Ameloot M, Michiels L, Wagner P. EDC-mediated DNA attachment to nanocrystalline CVD diamond films. Biosens Bioelectron 2006; 22:170-7. [PMID: 16442276 DOI: 10.1016/j.bios.2005.12.013] [Citation(s) in RCA: 59] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2005] [Revised: 11/04/2005] [Accepted: 12/14/2005] [Indexed: 11/27/2022]
Abstract
Chemical vapour deposited (CVD) diamond is a very promising material for biosensor fabrication owing both to its chemical inertness and the ability to make it electrical semiconducting that allows for connection with integrated circuits. For biosensor construction, a biochemical method to immobilize nucleic acids to a diamond surface has been developed. Nanocrystalline diamond is grown using microwave plasma-enhanced chemical vapour deposition (MPECVD). After hydrogenation of the surface, 10-undecenoic acid, an omega-unsaturated fatty acid, is tethered by 254 nm photochemical attachment. This is followed by 1-ethyl-3-[3-dimethylaminopropyl]carbodiimide (EDC)-mediated attachment of amino (NH(2))-modified dsDNA. The functionality of the covalently bound dsDNA molecules is confirmed by fluorescence measurements, PCR and gel electrophoresis during 35 denaturation and rehybridisation steps. The linking method after the fatty acid attachment can easily be applied to other biomolecules like antibodies and enzymes.
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Affiliation(s)
- P Christiaens
- Hasselt University, Institute for Materials Research and Transnationale Universiteit Limburg, School for Life Sciences, Wetenschapspark 1, B-3590 Diepenbeek, Belgium.
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16
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Laskay G, Kálmán K, Van Kerkhove E, Steels P, Ameloot M. Store-operated Ca2+-channels are sensitive to changes in extracellular pH. Biochem Biophys Res Commun 2005; 337:571-9. [PMID: 16198307 DOI: 10.1016/j.bbrc.2005.09.086] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2005] [Accepted: 09/09/2005] [Indexed: 10/25/2022]
Abstract
The sensitivity of store-operated Ca(2+)-entry to changes in the extra- and intracellular pH (pH(o) and pH(i), respectively) was investigated in SH-SY5Y human neuroblastoma cells. The intracellular Ca(2+)-stores were depleted either with 1 mM carbachol (CCH) or with 2 microM thapsigargin (TG). Extracellular acidification suppressed both the CCH- and TG-mediated Ca(2+)-entry while external alkalinization augmented both the CCH- and the TG-induced Ca(2+)-influx. Mn(2+)-quenching experiments revealed that the rates of Ca(2+)-entry at the thapsigargin- or carbachol-induced plateau were both accelerated at pH(o) 8.2 and slowed down at pH(o) 6.8 with respect to the control at pH(o) 7.4. Alteration of pH(o) between 6.8 and 8.2 did not have any significant prompt effect on pH(i) and changes in pH(i) left the CCH-induced Ca(2+)-entry unaffected. These findings demonstrate that physiologically relevant changes in pH(o) affect the store-operated Ca(2+)-entry in SH-SY5Y cells and suggest that endogenous pH(o) shifts may regulate cell activity in situ via modulating the store-operated Ca(2+)-entry.
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Affiliation(s)
- G Laskay
- Department of Botany, University of Szeged, Hungary.
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17
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Wenmackers S, Christiaens P, Daenen M, Haenen K, Nesládek M, van deVen M, Vermeeren V, Michiels L, Ameloot M, Wagner P. DNA attachment to nanocrystalline diamond films. ACTA ACUST UNITED AC 2005. [DOI: 10.1002/pssa.200561932] [Citation(s) in RCA: 28] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Cooreman P, Thoelen R, Manca J, vandeVen M, Vermeeren V, Michiels L, Ameloot M, Wagner P. Impedimetric immunosensors based on the conjugated polymer PPV. Biosens Bioelectron 2005; 20:2151-6. [PMID: 15741090 DOI: 10.1016/j.bios.2004.08.029] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2004] [Revised: 08/04/2004] [Accepted: 08/18/2004] [Indexed: 11/30/2022]
Abstract
In the work reported here, we investigated the interaction between the semiconducting polymer MDMO-PPV and antibodies against the fluorescent dyes fluorescein isothiocyanate (FITC) and Cy5. The antibodies are adsorbed physically onto thin polymer films on gold electrodes, as seen in AFM images of these films. By tuning the antibody concentration, the contact angle of distilled water with the film can be made to vary between 95 degrees and 50 degrees, showing that different surface densities of antibody can be obtained. That these biosensor films specifically bind their antigenic fluorescent molecules from PBS buffer solution is demonstrated by confocal fluorescence microscopy. Specific antigen-antibody recognition is demonstrated by lack of cross-sensitivity between the two antibodies and their antigens. In a biosensor prototype based on differential impedance spectroscopy, these polymer films show a clear response to 1 ppb antigen solution, with a time constant of 2-3 min.
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Affiliation(s)
- P Cooreman
- Institute for Materials Research, Limburgs Universitair Centrum, Wetenschapspark 1, B-3590 Diepenbeek, Belgium.
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19
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Vermeeren V, Christiaens P, Wenmackers S, Vandeven M, Ameloot M, Wagner P, Michiels L. EDC-mediated DNA attachment to nanocrystalline diamond. Commun Agric Appl Biol Sci 2005; 70:285-8. [PMID: 16366327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Affiliation(s)
- V Vermeeren
- Hasselt University, Biomedical Research Institute, Diepenbeek, Belgium
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20
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Buntinx M, Vanderlocht J, Hellings N, Vandenabeele F, Lambrichts I, Raus J, Ameloot M, Stinissen P, Steels P. Characterization of three human oligodendroglial cell lines as a model to study oligodendrocyte injury: morphology and oligodendrocyte-specific gene expression. ACTA ACUST UNITED AC 2004; 32:25-38. [PMID: 14618099 DOI: 10.1023/a:1027324230923] [Citation(s) in RCA: 89] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Oligodendrocytes, the myelin-forming cells of the central nervous system, are the target of pathogenic immune responses in multiple sclerosis. Primary cultures of human oligodendrocytes have been used to unravel the cellular and molecular mechanisms of immune-mediated injury of oligodendrocytes. However, these studies are hampered by the limited availability of viable human brain tissue. The present study was aimed at comparing the morphological and biochemical characteristics of the human oligodendroglial cell lines HOG, MO3.13 and KG-1C. We have determined oligodendrocyte-associated features of these lines and analyzed the degree to which they can be used as a model of human oligodendrocytes arrested at specific developmental stages. The oligodendroglial cell lines all exhibited markers of immature oligodendrocytes, such as CNPase and GalC, but not the astrocytic marker GFAP. Differentiation could be induced in HOG and MO3.13 cells, as was seen through a decrease in proliferation, an increase in process extension without formation of myelin sheets and up-regulation of genes associated with mature oligodendrocytes such as MBP and MOG. Microarray analysis revealed the expression of MAG, MOBP and OMG genes in HOG cells. The KG-1C cells displayed poor growth characteristics in the recommended conditions. In conclusion, our data show that the oligodendroglial cell lines HOG and MO3.13 can be used as a model of human oligodendrocytes "arrested" in an immature developmental stage. Culturing in appropriate medium can induce further differentiation of these cells. These cell lines can therefore be applied as a model to study immune-mediated injury of oligodendrocytes in relation to disease.
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Affiliation(s)
- M Buntinx
- Biomedisch Onderzoeksinstituut, Limburgs Universitair Centrum and School of Life Sciences, Transnational University Limburg, Universitaire Campus A, B-3590 Diepenbeek, Belgium
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21
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Wenmackers S, Haenen K, Nesládek M, Wagner P, Michiels L, van de Ven M, Ameloot M. Covalent immobilization of DNA on CVD diamond films. ACTA ACUST UNITED AC 2003. [DOI: 10.1002/pssa.200303822] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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22
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Jans F, Vandenabeele F, Helbert M, Lambrichts I, Ameloot M, Steels P. A simple method for obtaining functionally and morphologically intact primary cultures of the medullary thick ascending limb of Henle's loop (MTAL) from rabbit kidneys. Pflugers Arch 2000; 440:643-51. [PMID: 10958349 DOI: 10.1007/s004240000304] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Abstract
We describe a simple method for obtaining functionally and morphologically intact primary cultures of cells from the medullary thick ascending limb of rabbit kidneys. After digesting dissected fragments of the inner stripe of the outer medulla with collagenase, a suspension of tubule fragments is obtained, the vast majority of which are medullary thick ascending limb (MTAL) segments. These are identified individually by their morphological appearance and large amounts are collected with a micropipette mounted on a micromanipulator. This ensures maximal homogeneity of the starting material. Monolayers of cells grow out of these MTAL segments after seeding them onto collagen-coated, permeable filter supports. During the week following confluence, the cultures exhibit an apical side-positive transepithelial potential difference. Electron microscopic examination shows a monolayer of polarised cells with characteristics of distal tubular cells. The primary cultures express Tamm-Horsfall protein at their apical surface. Additional evidence for their differentiation and polarisation is the net ammonium influx, which occurs at very high rates across the apical membrane and is much slower across the basolateral membrane, as judged by measurements of intracellular pH. Adenosine 3',5'-cyclic monophosphate (cAMP) production is stimulated by arginine-vasopressin, calcitonin or isoproterenol (all 1 micromol/l). Intracellular calcium signalling is observed after stimulation with 1 micromol/l adenosine, adenosine 5'-triphosphate (ATP) and bradykinin. In addition, we compared these characteristics with those of TALH-SVE cell monolayers, an established immortalised cell line of the same origin.
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Affiliation(s)
- F Jans
- Limburgs Universitair Centrum, Laboratory of Physiology, Diepenbeek, Belgium
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23
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Abstract
This study investigates the usefulness of lifetime measurements of Sodium Green for evaluating intracellular Na+ concentration ([Na+]i) in HeLa cells. Frequency-domain lifetime measurements are performed in HeLa cells and in different buffer solutions (with and without K+ and bovine serum albumin). In all cases, the fluorescence decays of Sodium Green are multiexponential, with decay times independent of [Na+]. Three relaxation times are found in the various buffer solutions. Binding of the indicator to albumin results in an increase in the long and intermediate decay times. For Sodium Green inside HeLa cells, the intensity decay can be approximated by a biexponential. The ratio of the fractional intensity of the long decay time (tau2 = 2.4 +/- 0.2 ns) to that of the short component (tau1 = 0.4 +/- 0.1 ns) increases with [Na+]i. The changes in fluorescence decay with [Na+] are significantly less pronounced in cells as compared with the buffer solutions. Similar values for the resting [Na+]i were estimated from lifetime measurements of Sodium Green and from ratiometric measurements using SBFI. Alternatively, [Na+]i can be monitored by measuring only the phase angle at the modulation frequency of 160 MHz. The usefulness of this latter approach is demonstrated by following the changes in [Na+]i induced by reversible inhibition of the Na+/K+ pump.
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Affiliation(s)
- S Despa
- Laboratory of Physiology, Biomedisch Onderzoeksinstituut DWI, Limburgs Universitair Centrum, Universitaire Campus, Diepenbeek, Belgium
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24
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Abstract
The behavior of the sodium indicator sodium-binding benzofuran isophthalate (SBFI) is investigated in HeLa cells by time-resolved fluorescence microscopy. The fluorescence relaxation of SBFI in HeLa cells can be described by a triexponential for intracellular sodium concentration ([Na(+)](i)) between 0 and 90 mM. Changes in [Na(+)](i) affect neither the fluorescence relaxation times (0.21, 0. 60, and 2.7 ns) nor the average decay time (2.2 ns). The preexponential factor of the shortest decay time is negative. However, the ratio of the fluorescence excitation signal at 340 nm to that at 380 nm increases with [Na(+)](i). To elucidate the behavior of SBFI in cells, experiments are performed on SBFI in buffer at various concentrations of sodium, potassium, and bovine serum albumin (BSA) and at various viscosities. The fluorescence decay is triexponential only in the presence of BSA. The relaxation times are independent of [Na(+)] and [BSA]. The preexponential factor of the shortest decay time is negative from a certain [BSA] on, which depends on [Na(+)]. The data indicate that interactions with intracellular components rather than microviscosity influence the SBFI behavior in cells. A model is suggested in which the fluorescence intensities are mainly determined by the signals from the Na(+) subsetSBFI and SBFI subsetprotein complexes.
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Affiliation(s)
- S Despa
- Laboratory of Physiology, Limburgs Universitair Centrum, Diepenbeek, B-3590, Belgium
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Zeiske W, Smets I, Ameloot M, Steels P, van Driessche W. Intracellular pH shifts in cultured kidney (A6) cells: effects on apical Na+ transport. Am J Physiol 1999; 277:C469-79. [PMID: 10484334 DOI: 10.1152/ajpcell.1999.277.3.c469] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
We report, for the epithelial Na+ channel (ENaC) in A6 cells, the modulation by cell pH (pHc) of the transepithelial Na+ current (INa), the current through the individual Na+ channel (i), the open Na+ channel density (No), and the kinetic parameters of the relationship between I(Na) and the apical Na+ concentration. The i and N) were evaluated from the Lorentzian INa noise induced by the apical Na+ channel blocker 6-chloro-3, 5-diaminopyrazine-2-carboxamide. pHc shifts were induced, under strict and volume-controlled experimental conditions, by apical/basolateral NH4Cl pulses or basolateral arrest of the Na+/H+ exchanger (Na+ removal; block by ethylisopropylamiloride) and were measured with the pH-sensitive probe 2',7'-bis(2-carboxyethyl)-5(6)-carboxyfluorescein. The changes in pHc were positively correlated to changes in INa and the apically dominated transepithelial conductance. The sole pHc-sensitive parameter underlying INa was No. Only the saturation value of the INa kinetics was subject to changes in pHc. pHc-dependent changes in No may be caused by influencing Po, the ENaC open probability, or/and the total channel number, NT = No/Po.
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Affiliation(s)
- W Zeiske
- Laboratory of Physiology, Katholieke Universiteit Leuven, Campus Gasthuisberg, B-3000 Leuven, Belgium
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26
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Bene L, Szöllósi J, Balázs M, Mátyus L, Gáspár R, Ameloot M, Dale RE, Damjanovich S. Major histocompatibility complex class I protein conformation altered by transmembrane potential changes. Cytometry 1997; 27:353-7. [PMID: 9098627] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
The nature of charge distributions in membrane-bound macromolecular structures renders them susceptible to interaction with transmembrane potential fields. As a result, conformational changes in such species may be expected to occur when this potential is altered. We have detected reversible conformational change in the major histocompatibility complex (MHC) class I antigen in the plasma membrane of human JY cells, as monitored by flow-cytometric resonance energy-transfer, upon reduction of the transmembrane potential (depolarization). This change increased the intramolecular energy-transfer efficiency between fluorescent donor- and acceptor-labeled monoclonal antibodies directed, respectively, to epitopes on the light (beta 2-microglobulin) and the heavy chains of the MHC class I antigen. Repolarization of the depolarized samples restored the energy-transfer efficiency to the original values measured before depolarization. Depolarization caused similar relative changes in fluorescence resonance energy-transfer efficiency when Fab fragments were used for labeling MHC class I complex, suggesting that the observed phenomenon is not restricted to whole monoclonal antibodies.
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Affiliation(s)
- L Bene
- Department of Biophysics, Medical University School, Debrecen, Hungary
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27
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Kowalczyk A, Boens N, Meuwis K, Ameloot M. Potential misevaluation of the ground-state dissociation constant from fluorimetric titrations: application to the ion indicators SBFI, PBFI, and fura-2. Anal Biochem 1997; 245:28-37. [PMID: 9025965 DOI: 10.1006/abio.1996.9932] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
A test based on time-resolved fluorescence experiments is proposed to assess the interference of an excited-state reaction with the fluorimetric determination of the ground-state dissociation constant Kd of ion [symbol: see text] fluorescent indicator complexes. If an inflection point occurs in the plot of the fluorescence signal vs -log [ion] in the concentration range of the ion where both decay times are invariant, this inflection point can be associated with the correct Kd. In contrast, the inflection point(s) in the concentration range where the decay times vary cannot be attributed to Kd. The test is applied to the fluorescent ion indicators SBFI (for Na+), PBFI (for K+), and Fura-2 (for Ca2+). In all three cases the decay times are invariant in the physiological concentration ranges of the respective ions, indicating that the fluorimetrically determined Kd values are actually the true Kd values.
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Affiliation(s)
- A Kowalczyk
- Institute of Physics, Nicholas Copernicus University, Torun, Poland
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28
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Affiliation(s)
- A Kowalczyk
- Institute of Physics, Nicholas Copernicus University, Toruń, Poland
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29
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Panyi G, Gaspar R, Krasznai Z, ter Horst JJ, Ameloot M, Aszalos A, Steels P, Damjanovich S. Immunosuppressors inhibit voltage-gated potassium channels in human peripheral blood lymphocytes. Biochem Biophys Res Commun 1996; 221:254-8. [PMID: 8619842 DOI: 10.1006/bbrc.1996.0582] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Abstract
The effects of immunosuppressive agents on the potassium current of human peripheral blood lymphocytes have been studied using the whole-cell patch-clamp technique. Cyclosporin A (10 micrograms/ml), rapamycin (10 micrograms/ml) and FK-506 (2.5 micrograms/ml) reduced the peak K+ current by approximately 40, 30 and 40% of the control, respectively, without any change in the reversal potential of the current. The current inhibition was similar at all membrane potentials studied and was accompanied with an increase in the rate of K+ current inactivation. Membrane potential measurements in current-clamp showed a marked depolarization of the membrane (>10 mV) upon the addition of either immunosuppressor to the cells. Our findings revealed that the voltage-dependent potassium current in human peripheral blood lymphocytes is inhibited by Cyclosporin A and other immunosuppressors, resulting in a depolarized membrane potential.
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Affiliation(s)
- G Panyi
- Department of Biophysics, University Medical School of Debrecen, Hungary
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30
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Biasutti M, De Feyter S, De Backer S, Dutt G, De Schryver F, Ameloot M, Schlichting P, Müllen K. Steady-state and time-resolved fluorescence anisotropy of 2,9-di-n-pentyl-5,6,11,12-tetraazo-5,6,11,12-tetrahydrocoronene-5,6,11,12-tetracarboxy-bis-n-heptadecyclimide. Chem Phys Lett 1996. [DOI: 10.1016/0009-2614(95)01282-6] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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31
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Abstract
The photophysics of the complex forming reaction of Ca2+ and Fura-2 are investigated using steady-state and time-resolved fluorescence measurements. The fluorescence decay traces were analyzed with global compartmental analysis yielding the following values for the rate constants at room temperature in aqueous solution with BAPTA as Ca2+ buffer: k01 = 1.2 x 10(9)s-1, k21 = 1.0 x 10(11) M-1 s-1, k02 = 5.5 x 10(8) s-1, k12 = 2.2 x 10(7) s-1, and with EGTA as Ca2+ buffer: k01 = 1.4 x 10(9) s-1, k21 = 5.0 x 10(10) M-1 s-1, k02 = 5.5 x 10(8) s-1, k12 = 3.2 x 10(7) s-1. k01 and k02 denote the respective deactivation rate constants of the Ca2+ free and bound forms of Fura-2 in the excited state. k21 represents the second-order rate constant of binding of Ca2+ and Fura-2 in the excited state, whereas k12 is the first-order rate constant of dissociation of the excited Ca2+:Fura-2 complex. The ionic strength of the solution was shown not to influence the recovered values of the rate constants. From the estimated values of k12 and k21, the dissociation constant K*d in the excited state was calculated. It was found that in EGTA Ca2+ buffer pK*d (3.2) is smaller than pKd (6.9) and that there is negligible interference of the excited-state reaction with the determination of Kd and [Ca2+] from fluorimetric titration curves. Hence, Fura-2 can be safely used as an Ca2+ indicator. From the obtained fluorescence decay parameters and the steady-state excitation spectra, the species-associated excitation spectra of the Ca2+ free and bound forms of Fura-2 were calculated at intermediate Ca2+ concentrations.
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Affiliation(s)
- V Van den Bergh
- Department of Chemistry, Katholieke Universiteit Leuven, Heverlee, Belgium
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32
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De Schryver FC, Boens N, Van der Auweraer M, Viaene L, Reekmans S, Hermans B, Van Stam J, Gehlen M, Berghmans H, Ameloot M. Excited-state probing of associative and covalent macromolecules. PURE APPL CHEM 1995. [DOI: 10.1351/pac199567010157] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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33
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Matko J, Jenei A, Matyus L, Ameloot M, Damjanovich S. Mapping of cell surface protein-patterns by combined fluorescence anisotropy and energy transfer measurements. J Photochem Photobiol B 1993; 19:69-73. [PMID: 8336243 DOI: 10.1016/1011-1344(93)80096-r] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
Affiliation(s)
- J Matko
- Department of Biophysics, University Medical School of Debrecen, Hungary
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34
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Boens N, Ameloot M, Yamazaki I, De Schryver F. On the use and the performance of the delta function convolution method for the estimation of fluorescence decay parameters. Chem Phys 1988. [DOI: 10.1016/0301-0104(88)87006-x] [Citation(s) in RCA: 47] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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35
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Van Langen H, Levine Y, Ameloot M, Pottel H. Ambiguities in the interpretation of time-resolved fluorescence anisotropy measurements on lipid vesicle systems. Chem Phys Lett 1987. [DOI: 10.1016/0009-2614(87)80754-6] [Citation(s) in RCA: 30] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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36
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Ameloot M, Beechem J, Brand L. Compartmental modeling of excited-state reactions: identifiabilityof the rate constants from fluorecences decay surfaces. Chem Phys Lett 1986. [DOI: 10.1016/0009-2614(86)80199-3] [Citation(s) in RCA: 43] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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37
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Ameloot M, Beechem JM, Brand L. Simultaneous analysis of multiple fluorescence decay curves by Laplace transforms. Deconvolution with reference or excitation profiles. Biophys Chem 1986; 23:155-71. [PMID: 3708094 DOI: 10.1016/0301-4622(86)85001-3] [Citation(s) in RCA: 30] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
The properties and potentials of the noniterative Laplace deconvolution (LAP2) (M. Ameloot and H. Hendrickx, Biophys. J. 44 (1983) 27) are further investigated. It is shown that LAP2 is exact and that no extrapolations have to be calculated or assumed for the data measured in the actual time window if the impulse response function of the investigated system can be described by a sum of exponentials. The formulas for the LAP2 deconvolution against the measured decay of a reference compound instead of the recorded excitation profile are derived. The procedure for the simultaneous analysis of multiple fluorescence decay curves by LAP2 is described in detail. This global analysis allows one to link any decay parameter, is fast and compares favorably with the nonlinear least-squares iterative reconvolution methods. Because of its short computation time the global analysis by LAP2 provides an efficient way to analyze the fluorescence decay surface in terms of decay associated spectra.
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38
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Pottel H, Herreman W, van der Meer B, Ameloot M. On the significance of the fourth-rank orientational order parameter of fluorophores in membranes. Chem Phys 1986. [DOI: 10.1016/0301-0104(86)85115-1] [Citation(s) in RCA: 71] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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39
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Ameloot M, Hendrickx H, Herreman W, Pottel H, Van Cauwelaert F, van der Meer W. Effect of orientational order on the decay of the fluorescence anisotropy in membrane suspensions. Experimental verification on unilamellar vesicles and lipid/alpha-lactalbumin complexes. Biophys J 1985; 46:525-39. [PMID: 6548649 PMCID: PMC1435015 DOI: 10.1016/s0006-3495(84)84050-3] [Citation(s) in RCA: 102] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022] Open
Abstract
Various models for the analysis of time-dependent fluorescence anisotropy measurements were evaluated. The discussion was based on the analysis of pulsed experiments with 1,6-diphenyl-1,3,5-hexatriene embedded in small unilamellar vesicles of dimyristoylphosphatidylcholine or dipalmitoylphosphatidylcholine and in dimyristoylphosphatidylcholine/alpha-lactalbumin complexes. It was shown that a recently proposed model (Van der Meer, W., H. Pottel, W. Herreman, M. Ameloot, H. Hendrickx, H. Schröder, 1984, Biophys. J., 46:515-523) described the data better than did the earlier suggested cone model (Kinosita K., Jr., S. Kawato, and A. Ikegami, 1977, Biophys. J., 20:289-305). This permitted the use of the new model for the estimation of the second- and fourth-rank order parameters on nonoriented systems. The results indicated that a fraction of the probes was oriented perpendicularly to the preferred direction of the lipids. An increase of the rotational correlation times of the fluorescent probe and a higher order of its environment were detected after the interaction of alpha-lactalbumin with the dimyristoylphosphatidylcholine vesicles at acidic pH at 24.2 degrees C.
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van der Meer W, Pottel H, Herreman W, Ameloot M, Hendrickx H, Schröder H. Effect of orientational order on the decay of the fluorescence anisotropy in membrane suspensions. A new approximate solution of the rotational diffusion equation. Biophys J 1984; 46:515-23. [PMID: 6498269 PMCID: PMC1435014 DOI: 10.1016/s0006-3495(84)84049-7] [Citation(s) in RCA: 109] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023] Open
Abstract
We discussed the time-dependence of fluorescent emission anisotropy of a cylindrical probe in membrane vesicles. We showed that, if the motion of the probe were described as diffusion in an anisotropic environment, it would be possible to determine not only the second-rank but also the fourth-rank orientational order parameter from the decay of the fluorescence anisotropy. The approximations involved were based on an interpolation of short-time and long-time behavior of the relevant correlation functions. A general expression was derived for the time dependence of the fluorescence anisotropy in closed form, which applies to any particular distribution model. It was shown to be in good agreement with previously reported results for the cone model and the Gaussian model. Finally, the applicability of the theory to time-resolved and differential phase fluorescence depolarization experiments was discussed.
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41
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Abstract
The original Laplace deconvolution of luminescence data, obtained with pulsed systems, is reviewed. The system of equations from which the luminescence parameters can be determined is generalized for the case that describes the relaxation by a sum of exponentials. Artifacts such as scatter and time-shift can be taken into account. A modification of the original method that eliminates the iterative procedure in the estimation of the cut-off correction is suggested. This modified Laplace method is no longer restricted to the cases where the cut-off error is rather small and the exciting flash has a low tail. The possibility of the combination of several discrete experiments in a single Laplace deconvolution, without introducing new parameters or normalization factors, is shown. The merits of this combination method are demonstrated on a time-resolved depolarization experiment.
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42
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