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Del Bianco M, Friml J, Strader L, Kepinski S. Auxin research: creating tools for a greener future. J Exp Bot 2023; 74:6889-6892. [PMID: 38038239 PMCID: PMC10690723 DOI: 10.1093/jxb/erad420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2023]
Affiliation(s)
| | - Jiří Friml
- Institute of Science and Technology Austria (ISTA), Klosterneuburg, Austria
| | - Lucia Strader
- Department of Biology, Duke University, Durham, NC, USA
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Scintu D, Scacchi E, Cazzaniga F, Vinciarelli F, De Vivo M, Shtin M, Svolacchia N, Bertolotti G, Unterholzner SJ, Del Bianco M, Timmermans M, Di Mambro R, Vittorioso P, Sabatini S, Costantino P, Dello Ioio R. Author Correction: microRNA165 and 166 modulate response of the Arabidopsis root apical meristem to salt stress. Commun Biol 2023; 6:883. [PMID: 37644094 PMCID: PMC10465606 DOI: 10.1038/s42003-023-05245-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/31/2023] Open
Affiliation(s)
- Daria Scintu
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
- Department of Biology, University of Pisa, via L. Ghini, 13, 56126, Pisa, Italy
| | - Emanuele Scacchi
- Center for Plant Molecular Biology, University of Tübingen, Auf der Morgenstelle 32, Tübingen, 72076, Germany
| | - Francesca Cazzaniga
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Federico Vinciarelli
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Mirko De Vivo
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Margaryta Shtin
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
- Department of Biology, University of Pisa, via L. Ghini, 13, 56126, Pisa, Italy
| | - Noemi Svolacchia
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Gaia Bertolotti
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Simon Josef Unterholzner
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Piazzale Università, 5, 39100, Bolzano, Italy
| | | | - Marja Timmermans
- Center for Plant Molecular Biology, University of Tübingen, Auf der Morgenstelle 32, Tübingen, 72076, Germany
| | - Riccardo Di Mambro
- Department of Biology, University of Pisa, via L. Ghini, 13, 56126, Pisa, Italy
| | - Paola Vittorioso
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Sabrina Sabatini
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Paolo Costantino
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Raffaele Dello Ioio
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy.
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Scintu D, Scacchi E, Cazzaniga F, Vinciarelli F, De Vivo M, Shtin M, Svolacchia N, Bertolotti G, Unterholzner SJ, Del Bianco M, Timmermans M, Di Mambro R, Vittorioso P, Sabatini S, Costantino P, Dello Ioio R. microRNA165 and 166 modulate response of the Arabidopsis root apical meristem to salt stress. Commun Biol 2023; 6:834. [PMID: 37567954 PMCID: PMC10421904 DOI: 10.1038/s42003-023-05201-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2022] [Accepted: 08/01/2023] [Indexed: 08/13/2023] Open
Abstract
In plants, developmental plasticity allows for the modulation of organ growth in response to environmental cues. Being in contact with soil, roots are the first organ that responds to various types of soil abiotic stress such as high salt concentration. In the root, developmental plasticity relies on changes in the activity of the apical meristem, the region at the tip of the root where a set of self-renewing undifferentiated stem cells sustain growth. Here, we show that salt stress promotes differentiation of root meristem cells via reducing the dosage of the microRNAs miR165 and 166. By means of genetic, molecular and computational analysis, we show that the levels of miR165 and 166 respond to high salt concentration, and that miR165 and 166-dependent PHABULOSA (PHB) modulation is central to the response of root growth to this stress. Specifically, we show that salt-dependent reduction of miR165 and 166 causes a rapid increase in PHB expression and, hence, production of the root meristem pro-differentiation hormone cytokinin. Our data provide direct evidence for how the miRNA-dependent modulation of transcription factor dosage mediates plastic development in plants.
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Affiliation(s)
- Daria Scintu
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
- Department of Biology, University of Pisa, via L. Ghini, 13, 56126, Pisa, Italy
| | - Emanuele Scacchi
- Center for Plant Molecular Biology, University of Tübingen, Auf der Morgenstelle 32, Tübingen, 72076, Germany
| | - Francesca Cazzaniga
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Federico Vinciarelli
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Mirko De Vivo
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Margaryta Shtin
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
- Department of Biology, University of Pisa, via L. Ghini, 13, 56126, Pisa, Italy
| | - Noemi Svolacchia
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Gaia Bertolotti
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Simon Josef Unterholzner
- Faculty of Science and Technology, Free University of Bozen-Bolzano, Piazzale Università, 5, 39100, Bolzano, Italy
| | | | - Marja Timmermans
- Center for Plant Molecular Biology, University of Tübingen, Auf der Morgenstelle 32, Tübingen, 72076, Germany
| | - Riccardo Di Mambro
- Department of Biology, University of Pisa, via L. Ghini, 13, 56126, Pisa, Italy
| | - Paola Vittorioso
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Sabrina Sabatini
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Paolo Costantino
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy
| | - Raffaele Dello Ioio
- Dipartimento di Biologia e Biotecnologie Charles Darwin, Università di Roma, Sapienza - via dei Sardi, 70, 00185, Rome, Italy.
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Amitrano C, Paglialunga G, Battistelli A, De Micco V, Del Bianco M, Liuzzi G, Moscatello S, Paradiso R, Proietti S, Rouphael Y, De Pascale S. Defining growth requirements of microgreens in space cultivation via biomass production, morpho-anatomical and nutritional traits analysis. Front Plant Sci 2023; 14:1190945. [PMID: 37538067 PMCID: PMC10394706 DOI: 10.3389/fpls.2023.1190945] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Accepted: 06/29/2023] [Indexed: 08/05/2023]
Abstract
During long-term manned missions to the Moon or Mars, the integration of astronauts' diet with fresh food rich in functional compounds, like microgreens, could strengthen their physiological defenses against the oxidative stress induced by the exposure to space factors. Therefore, the development of targeted cultivation practices for microgreens in space is mandatory, since the cultivation in small, closed facilities may alter plant anatomy, physiology, and resource utilization with species-specific responses. Here, the combined effect of two vapor pressure deficit levels (VPD: 0.14 and 1.71 kPa) and two light intensities (150 and 300 µmol photons m-2 s-1 PPFD) on two species for microgreen production (Brassica oleracea var. capitata f. sabauda 'Vertus' and Raphanus raphanistrum subsp. sativus 'Saxa'), was tested on biomass production per square meter, morpho-anatomical development, nutritional and nutraceutical properties. Microgreens were grown in fully controlled conditions under air temperature of 18/24°C, on coconut fiber mats, RGB light spectrum and 12 h photoperiod, till they reached the stage of first true leaves. At this stage microgreens were samples, for growth and morpho-anatomical analyses, and to investigate the biochemical composition in terms of ascorbic acid, phenols, anthocyanin, carotenoids, carbohydrates, as well as of anti-nutritional compounds, such as nitrate, sulfate, and phosphate. Major differences in growth were mostly driven by the species with 'Saxa' always presenting the highest fresh and dry weight as well as the highest elongation; however light intensity and VPDs influenced the anatomical development of microgreens, and the accumulation of ascorbic acid, carbohydrates, nitrate, and phosphate. Both 'Saxa' and 'Vertus' at low VPD (LV) and 150 PPFD increased the tissue thickness and synthetized high β-carotene and photosynthetic pigments. Moreover, 'Vertus' LV 150, produced the highest content of ascorbate, fundamental for nutritional properties in space environment. The differences among the treatments and their interaction suggested a relevant difference in resource use efficiency. In the light of the above, microgreens can be considered suitable for cultivation in limited-volume growth modules directly onboard, provided that all the environmental factors are combined and modulated according to the species requirements to enhance their growth and biomass production, and to achieve specific nutritional traits.
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Affiliation(s)
- Chiara Amitrano
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
| | - Gabriele Paglialunga
- Research Institute on Terrestrial Ecosystems (IRET), National Research Council of Italy (CNR), Porano, Terni, Italy
| | - Alberto Battistelli
- Research Institute on Terrestrial Ecosystems (IRET), National Research Council of Italy (CNR), Porano, Terni, Italy
| | - Veronica De Micco
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
| | | | - Greta Liuzzi
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
| | - Stefano Moscatello
- Research Institute on Terrestrial Ecosystems (IRET), National Research Council of Italy (CNR), Porano, Terni, Italy
| | - Roberta Paradiso
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
| | - Simona Proietti
- Research Institute on Terrestrial Ecosystems (IRET), National Research Council of Italy (CNR), Porano, Terni, Italy
| | - Youssef Rouphael
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
| | - Stefania De Pascale
- Department of Agricultural Sciences, University of Naples Federico II, Portici, Naples, Italy
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Calabria D, Trozzi I, Lazzarini E, Pace A, Zangheri M, Iannascoli L, Maipan Davis N, Gosikere Matadha SS, Baratto De Albuquerque T, Pirrotta S, Del Bianco M, Impresario G, Popova L, Lovecchio N, de Cesare G, Caputo D, Brucato J, Nascetti A, Guardigli M, Mirasoli M. AstroBio-CubeSat: A lab-in-space for chemiluminescence-based astrobiology experiments. Biosens Bioelectron 2023; 226:115110. [PMID: 36750012 DOI: 10.1016/j.bios.2023.115110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Revised: 01/14/2023] [Accepted: 01/26/2023] [Indexed: 01/30/2023]
Abstract
Space exploration is facing a new era in view of the planned missions to the Moon and Mars. The development and the in-flight validation of new technologies, including analytical and diagnostic platforms, is pivotal for exploring and inhabiting these extreme environments. In this context, biosensors and lab-on-chip devices can play an important role in many situations, such as the analysis of biological samples for assessing the impact of deep space conditions on man and other biological systems, environmental and food safety monitoring, and the search of molecular indicators of past or present life in extra-terrestrial environments. Small satellites such as CubeSats are nowadays increasingly exploited as fast and low-cost platforms for conducting in-flight technology validation. Herein, we report the development of a fully autonomous lab-on-chip platform for performing chemiluminescence-based bioassays in space. The device was designed to be hosted onboard the AstroBio CubeSat nanosatellite, with the aim of conducting its in-flight validation and evaluating the stability of (bio)molecules required for bioassays in a challenging radiation environment. An origami-like microfluidic paper-based analytical format allowed preloading all the reagents in the dried form on the paper substrate, thus simplifying device design and analytical protocols, facilitating autonomous assay execution, and enhancing the stability of reagents. The chosen approach should constitute the first step to implement a mature technology with the aim to conduct life science research in space (e.g., for evaluation the effect of deep space conditions on living organisms or searching molecular evidence of life) more easily and at lower cost than previously possible.
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Affiliation(s)
- Donato Calabria
- Department of Chemistry "Giacomo Ciamician", Alma Mater Studiorum - University of Bologna, Via Selmi 2, I-40126, Bologna, Italy; Interdepartmental Centre for Industrial Aerospace Research (CIRI AEROSPACE), Alma Mater Studiorum - University of Bologna, Via Baldassarre Canaccini 12, I-47121, Forlì, Italy
| | - Ilaria Trozzi
- Department of Chemistry "Giacomo Ciamician", Alma Mater Studiorum - University of Bologna, Via Selmi 2, I-40126, Bologna, Italy
| | - Elisa Lazzarini
- Department of Chemistry "Giacomo Ciamician", Alma Mater Studiorum - University of Bologna, Via Selmi 2, I-40126, Bologna, Italy
| | - Andrea Pace
- Department of Chemistry "Giacomo Ciamician", Alma Mater Studiorum - University of Bologna, Via Selmi 2, I-40126, Bologna, Italy
| | - Martina Zangheri
- Department of Chemistry "Giacomo Ciamician", Alma Mater Studiorum - University of Bologna, Via Selmi 2, I-40126, Bologna, Italy
| | - Lorenzo Iannascoli
- School of Aerospace Engineering, Sapienza University of Rome, Via Salaria 851, I-00138, Rome, Italy
| | - Nithin Maipan Davis
- School of Aerospace Engineering, Sapienza University of Rome, Via Salaria 851, I-00138, Rome, Italy
| | | | | | - Simone Pirrotta
- Italian Space Agency (ASI), Via del Politecnico, I-00133, Roma, Italy
| | - Marta Del Bianco
- Italian Space Agency (ASI), Via del Politecnico, I-00133, Roma, Italy
| | | | - Liyana Popova
- Kayser Italia s.r.l., Via di Popogna 501, I-57128, Livorno, Italy
| | - Nicola Lovecchio
- Department of Information Engineering, Electronics and Telecommunications, Sapienza University of Rome, Via Eudossiana 18, I-00184, Rome, Italy
| | - Giampiero de Cesare
- Department of Information Engineering, Electronics and Telecommunications, Sapienza University of Rome, Via Eudossiana 18, I-00184, Rome, Italy
| | - Domenico Caputo
- Department of Information Engineering, Electronics and Telecommunications, Sapienza University of Rome, Via Eudossiana 18, I-00184, Rome, Italy
| | - John Brucato
- INAF-Astrophysical Observatory of Arcetri, Largo E. Fermi 5, I-50125, Florence, Italy
| | - Augusto Nascetti
- School of Aerospace Engineering, Sapienza University of Rome, Via Salaria 851, I-00138, Rome, Italy.
| | - Massimo Guardigli
- Department of Chemistry "Giacomo Ciamician", Alma Mater Studiorum - University of Bologna, Via Selmi 2, I-40126, Bologna, Italy; Interdepartmental Centre for Industrial Aerospace Research (CIRI AEROSPACE), Alma Mater Studiorum - University of Bologna, Via Baldassarre Canaccini 12, I-47121, Forlì, Italy
| | - Mara Mirasoli
- Department of Chemistry "Giacomo Ciamician", Alma Mater Studiorum - University of Bologna, Via Selmi 2, I-40126, Bologna, Italy; Interdepartmental Centre for Industrial Aerospace Research (CIRI AEROSPACE), Alma Mater Studiorum - University of Bologna, Via Baldassarre Canaccini 12, I-47121, Forlì, Italy.
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Shtin M, Dello Ioio R, Del Bianco M. It's Time for a Change: The Role of Gibberellin in Root Meristem Development. Front Plant Sci 2022; 13:882517. [PMID: 35592570 PMCID: PMC9112047 DOI: 10.3389/fpls.2022.882517] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2022] [Accepted: 04/14/2022] [Indexed: 05/21/2023]
Abstract
One of the most amazing characteristics of plants is their ability to grow and adapt their development to environmental changes. This fascinating feature is possible thanks to the activity of meristems, tissues that contain lasting self-renewal stem cells. Because of its simple and symmetric structure, the root meristem emerged as a potent system to uncover the developmental mechanisms behind the development of the meristems. The root meristem is formed during embryogenesis and sustains root growth for all the plant's lifetime. In the last decade, gibberellins have emerged as a key regulator for root meristem development. This phytohormone functions as a molecular clock for root development. This mini review discusses the latest advances in understanding the role of gibberellin in root development and highlights the central role of this hormone as developmental timer.
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Affiliation(s)
- Margaryta Shtin
- Department of Biology and Biotechnology “C. Darwin”, Laboratory of Functional Genomics and Proteomics of Model Systems, University of Rome “Sapienza”, Rome, Italy
| | - Raffaele Dello Ioio
- Department of Biology and Biotechnology “C. Darwin”, Laboratory of Functional Genomics and Proteomics of Model Systems, University of Rome “Sapienza”, Rome, Italy
- *Correspondence: Raffaele Dello Ioio,
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Affiliation(s)
- Marta Del Bianco
- Italian Space Agency, Via del Politecnico snc, Rome, 00133, Italy
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Affiliation(s)
- Marta Del Bianco
- Centre for Plant Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, UK
| | - Stefan Kepinski
- Centre for Plant Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, UK
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Roychoudhry S, Kieffer M, Del Bianco M, Liao CY, Weijers D, Kepinski S. The developmental and environmental regulation of gravitropic setpoint angle in Arabidopsis and bean. Sci Rep 2017; 7:42664. [PMID: 28256503 PMCID: PMC5335621 DOI: 10.1038/srep42664] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2016] [Accepted: 01/13/2017] [Indexed: 11/30/2022] Open
Abstract
Root and shoot branches are major determinants of plant form and critical for the effective capture of resources below and above ground. These branches are often maintained at specific angles with respect to gravity, known as gravitropic set point angles (GSAs). We have previously shown that the mechanism permitting the maintenance of non-vertical GSAs is highly auxin-dependent and here we investigate the developmental and environmental regulation of root and shoot branch GSA. We show that nitrogen and phosphorous deficiency have opposing, auxin signalling-dependent effects on lateral root GSA in Arabidopsis: while low nitrate induces less vertical lateral root GSA, phosphate deficiency results in a more vertical lateral root growth angle, a finding that contrasts with the previously reported growth angle response of bean adventitious roots. We find that this root-class-specific discrepancy in GSA response to low phosphorus is mirrored by similar differences in growth angle response to auxin treatment between these root types. Finally we show that both shaded, low red/far-red light conditions and high temperature induce more vertical growth in Arabidopsis shoot branches. We discuss the significance of these findings in the context of efforts to improve crop performance via the manipulation of root and shoot branch growth angle.
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Affiliation(s)
| | - Martin Kieffer
- Centre for Plant Sciences, University of Leeds, Leeds, UK
| | | | - Che-Yang Liao
- Laboratory of Biochemistry, Wageningen University, Wageningen, The Netherlands
| | - Dolf Weijers
- Laboratory of Biochemistry, Wageningen University, Wageningen, The Netherlands
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Perilli S, Perez-Perez JM, Di Mambro R, Peris CL, Díaz-Triviño S, Del Bianco M, Pierdonati E, Moubayidin L, Cruz-Ramírez A, Costantino P, Scheres B, Sabatini S. RETINOBLASTOMA-RELATED protein stimulates cell differentiation in the Arabidopsis root meristem by interacting with cytokinin signaling. Plant Cell 2013; 25:4469-78. [PMID: 24285791 PMCID: PMC3875730 DOI: 10.1105/tpc.113.116632] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2013] [Revised: 11/04/2013] [Accepted: 11/14/2013] [Indexed: 05/23/2023]
Abstract
Maintenance of mitotic cell clusters such as meristematic cells depends on their capacity to maintain the balance between cell division and cell differentiation necessary to control organ growth. In the Arabidopsis thaliana root meristem, the antagonistic interaction of two hormones, auxin and cytokinin, regulates this balance by positioning the transition zone, where mitotically active cells lose their capacity to divide and initiate their differentiation programs. In animals, a major regulator of both cell division and cell differentiation is the tumor suppressor protein RETINOBLASTOMA. Here, we show that similarly to its homolog in animal systems, the plant RETINOBLASTOMA-RELATED (RBR) protein regulates the differentiation of meristematic cells at the transition zone by allowing mRNA accumulation of AUXIN RESPONSE FACTOR19 (ARF19), a transcription factor involved in cell differentiation. We show that both RBR and the cytokinin-dependent transcription factor ARABIDOPSIS RESPONSE REGULATOR12 are required to activate the transcription of ARF19, which is involved in promoting cell differentiation and thus root growth.
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Affiliation(s)
- Serena Perilli
- Department of Biology and Biotechnology, Laboratories of Functional Genomics and Proteomics of Model Systems, University of Rome Sapienza, 00185 Rome, Italy
| | - José Manuel Perez-Perez
- Molecular Genetics, Department of Biology, University of Utrecht, 3584 CH Utrecht, The Netherlands
| | - Riccardo Di Mambro
- Department of Biology and Biotechnology, Laboratories of Functional Genomics and Proteomics of Model Systems, University of Rome Sapienza, 00185 Rome, Italy
| | - Cristina Llavata Peris
- Department of Biology and Biotechnology, Laboratories of Functional Genomics and Proteomics of Model Systems, University of Rome Sapienza, 00185 Rome, Italy
| | - Sara Díaz-Triviño
- Molecular Genetics, Department of Biology, University of Utrecht, 3584 CH Utrecht, The Netherlands
| | - Marta Del Bianco
- Department of Biology and Biotechnology, Laboratories of Functional Genomics and Proteomics of Model Systems, University of Rome Sapienza, 00185 Rome, Italy
| | - Emanuela Pierdonati
- Department of Biology and Biotechnology, Laboratories of Functional Genomics and Proteomics of Model Systems, University of Rome Sapienza, 00185 Rome, Italy
| | - Laila Moubayidin
- Department of Biology and Biotechnology, Laboratories of Functional Genomics and Proteomics of Model Systems, University of Rome Sapienza, 00185 Rome, Italy
| | - Alfredo Cruz-Ramírez
- Molecular Genetics, Department of Biology, University of Utrecht, 3584 CH Utrecht, The Netherlands
| | - Paolo Costantino
- Department of Biology and Biotechnology, Laboratories of Functional Genomics and Proteomics of Model Systems, University of Rome Sapienza, 00185 Rome, Italy
| | - Ben Scheres
- Molecular Genetics, Department of Biology, University of Utrecht, 3584 CH Utrecht, The Netherlands
| | - Sabrina Sabatini
- Department of Biology and Biotechnology, Laboratories of Functional Genomics and Proteomics of Model Systems, University of Rome Sapienza, 00185 Rome, Italy
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Roychoudhry S, Del Bianco M, Kieffer M, Kepinski S. Auxin controls gravitropic setpoint angle in higher plant lateral branches. Curr Biol 2013; 23:1497-504. [PMID: 23891109 DOI: 10.1016/j.cub.2013.06.034] [Citation(s) in RCA: 86] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2012] [Revised: 04/28/2013] [Accepted: 06/13/2013] [Indexed: 11/19/2022]
Abstract
Lateral branches in higher plants are often maintained at specific angles with respect to gravity, a quantity known as the gravitropic setpoint angle (GSA) [1]. Despite the importance of GSA control as a fundamental determinant of plant form, the mechanisms underlying gravity-dependent angled growth are not known. Here we address the central questions of how stable isotropic growth of a branch at a nonvertical angle is maintained and of how the value of that angle is set. We show that nonvertical lateral root and shoot branches are distinguished from the primary axis by the existence of an auxin-dependent antigravitropic offset mechanism that operates in tension with gravitropic response to generate angled isotropic growth. Further, we show that the GSA of lateral roots and shoots is dependent upon the magnitude of the antigravitropic offset component. Finally, we show that auxin specifies GSA values dynamically throughout development by regulating the magnitude of the antigravitropic offset component via TIR1/AFB-Aux/IAA-ARF-dependent auxin signaling within the gravity-sensing cells of the root and shoot. The involvement of auxin in controlling GSA is yet another example of auxin's remarkable capacity to self-organize in development [2] and provides a conceptual framework for understanding the specification of GSA throughout nature.
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Del Bianco M, Giustini L, Sabatini S. Spatiotemporal changes in the role of cytokinin during root development. New Phytol 2013; 199:324-338. [PMID: 23692218 DOI: 10.1111/nph.12338] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2013] [Accepted: 04/12/2013] [Indexed: 05/07/2023]
Abstract
The root is a dynamic system whose structure is regulated by a complex network of interactions between hormones. The primary root meristem is specified in the embryo. After germination, the primary root meristem grows and then reaches a final size that will be maintained during the life of the plant. Subsequently, secondary structures such as lateral roots and root nodules form via the re-specification of differentiated cells. Cytokinin plays key roles in the regulation of root development. Down-regulation of the cytokinin response is required for the specification of a new stem cell niche, during both embryo and lateral root development. In the root meristem, cytokinin signalling regulates the longitudinal zonation of the meristem by controlling cell differentiation. Moreover, cytokinin regulates radial patterning of root vasculature by promoting protophloem cell identity and by spatially inhibiting protoxylem formation. In this review, an effort is made to describe the known details of the role of cytokinin during root development, taking into account also the interactions between cytokinin and other hormones. Attention is given on the dynamicity of cytokinin signalling output during different developmental events. Indeed, there is much evidence that the effects of cytokinin change as organs grow, underlining the importance of the spatiotemporal specificity of cytokinin signalling.
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Affiliation(s)
- Marta Del Bianco
- Laboratory of Functional Genomics and Proteomics of Model Systems, Dipartimento di Biologia e Biotecnologie, Università di Roma, Sapienza - via dei Sardi, 70-00185, Rome, Italy
| | - Leonardo Giustini
- Laboratory of Functional Genomics and Proteomics of Model Systems, Dipartimento di Biologia e Biotecnologie, Università di Roma, Sapienza - via dei Sardi, 70-00185, Rome, Italy
| | - Sabrina Sabatini
- Laboratory of Functional Genomics and Proteomics of Model Systems, Dipartimento di Biologia e Biotecnologie, Università di Roma, Sapienza - via dei Sardi, 70-00185, Rome, Italy
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Abstract
Auxin is a simple molecule with a remarkable ability to control plant growth, differentiation, and morphogenesis. The mechanistic basis for this versatility appears to stem from the highly complex nature of the networks regulating auxin metabolism, transport and response. These heavily feedback-regulated and inter-dependent mechanisms are complicated in structure and complex in operation giving rise to a system with self-organizing properties capable of generating highly context-specific responses to auxin as a single, generic signal.
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Affiliation(s)
- Marta Del Bianco
- University of Leeds, Faculty of Biological Sciences, Leeds, LS2 9JT, United Kingdom
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