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Ren P, Chen M, Liu Q, Wu J, Li R, Lin Z, Li J. Gga-let-7a-3p inhibits the proliferation and differentiation of chicken intramuscular preadipocytes. Br Poult Sci 2024; 65:34-43. [PMID: 37807894 DOI: 10.1080/00071668.2023.2264807] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2023] [Accepted: 09/11/2023] [Indexed: 10/10/2023]
Abstract
1. Intramuscular fat (IMF) is a key parameter for chicken meat quality. IMF deposition is driven by genetic, nutritional and management factors, with genetics being the determining factor. Previous whole transcriptome sequencing revealed that microRNA gga-let-7a-3p was related to lipid metabolism in breast muscle. This study further investigated the potential role of gga-let-7a-3p in IMF deposition.2. The mimic and inhibitor of gga-let-7a-3p were individually transfected into chicken intramuscular preadipocytes. Subsequently, the proliferation and differentiation states of the cells were detected. Transcriptome sequencing was performed on cells transfected with gga-let-7a-3p mimic.3. The results indicated that gga-let-7a-3p suppressed the mRNA levels of proliferation and differentiation-related genes, as well as the protein levels. EdU and Oil Red O assays revealed that gga-let-7a-3p restrained preadipocyte proliferation and differentiation. In addition, a total of 333 up-regulated genes and 807 down-regulated genes were identified in cells transfected with gga-let-7a-3p mimic. Using Kyoto Encyclopaedia of Genes and Genomes (KEGG) and Gene Ontology (GO) analysis, differential genes were found to be enriched in processes such as the peroxisome proliferator activated receptor (PPAR) signalling pathway and oxidative phosphorylation.4. The study demonstrated that gga-let-7a-3p inhibits the proliferation and differentiation of chicken intramuscular preadipocytes, which provides new understanding to further unravel the function of gga-let-7a-3p.
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Affiliation(s)
- P Ren
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China
| | - M Chen
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China
| | - Q Liu
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China
| | - J Wu
- Institute of Animal Science and Technology of Aba Tibetan and Qiang Autonomous Prefecture, Aba, Sichuan, China
| | - R Li
- Institute of Animal Science and Technology of Aba Tibetan and Qiang Autonomous Prefecture, Aba, Sichuan, China
| | - Z Lin
- Farm Animal Genetic Resources Exploration and Innovation Key Laboratory of Sichuan Province, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - J Li
- School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan, China
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Yang X, Li Z, Xu W, Zhu G, Feng X, Zhang J, Zhao H, Chen Y, Kong J, Mai W, Li LS, Pippel DJ, Ren P, Deng X. Hindered Biaryl Bond Construction and Subsequent Diastereomeric Crystallization to Produce an Atropisomeric Covalent KRAS G12C Inhibitor ARS-2102. Org Process Res Dev 2022. [DOI: 10.1021/acs.oprd.2c00335] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Xiaogen Yang
- STA Pharmaceutical Co., Ltd., a WuXi AppTec Company, 288 Fute Zhong Road, Waigaoqiao Pilot Free Trade Zone, Shanghai 200131, China
| | - Zhiwen Li
- STA Pharmaceutical Co., Ltd., a WuXi AppTec Company, 288 Fute Zhong Road, Waigaoqiao Pilot Free Trade Zone, Shanghai 200131, China
| | - Wenwen Xu
- STA Pharmaceutical Co., Ltd., a WuXi AppTec Company, 288 Fute Zhong Road, Waigaoqiao Pilot Free Trade Zone, Shanghai 200131, China
| | - Guanming Zhu
- STA Pharmaceutical Co., Ltd., a WuXi AppTec Company, 288 Fute Zhong Road, Waigaoqiao Pilot Free Trade Zone, Shanghai 200131, China
| | - Xiantong Feng
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Jun Zhang
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Hongbin Zhao
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Yuyin Chen
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Jianshe Kong
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Wanping Mai
- Wellspring Biosciences Inc., 10770 Wateridge Cir. Unit 120, San Diego, California 92121, United States
| | - Lian-Sheng Li
- Wellspring Biosciences Inc., 10770 Wateridge Cir. Unit 120, San Diego, California 92121, United States
| | - Daniel J. Pippel
- Janssen Research & Development LLC, 3210 Merryfield Row, San Diego, California 92121, United States
| | - Pingda Ren
- Wellspring Biosciences Inc., 10770 Wateridge Cir. Unit 120, San Diego, California 92121, United States
| | - Xiaohu Deng
- Wellspring Biosciences Inc., 10770 Wateridge Cir. Unit 120, San Diego, California 92121, United States
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Allison BD, Deng X, Li LS, Liang J, Mani NS, Ren P, Sales ZS. Selective Metalation of Functionalized Quinazolines to Enable Discovery and Advancement of Covalent KRAS Inhibitors. Org Process Res Dev 2022. [DOI: 10.1021/acs.oprd.2c00242] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Brett D. Allison
- Janssen Research and Development, LLC., 3210 Merryfield Row, San Diego, California 92121, United States
| | - Xiaohu Deng
- Wellspring Biosciences, 3033 Science Park Dr., Ste. 200, San Diego, California 92121, United States
| | - Lian-Sheng Li
- Wellspring Biosciences, 3033 Science Park Dr., Ste. 200, San Diego, California 92121, United States
| | - Jimmy Liang
- Janssen Research and Development, LLC., 3210 Merryfield Row, San Diego, California 92121, United States
| | - Neelakandha S. Mani
- Janssen Research and Development, LLC., 3210 Merryfield Row, San Diego, California 92121, United States
| | - Pingda Ren
- Wellspring Biosciences, 3033 Science Park Dr., Ste. 200, San Diego, California 92121, United States
| | - Zachary S. Sales
- Janssen Research and Development, LLC., 3210 Merryfield Row, San Diego, California 92121, United States
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Ma Y, Ren P, Tong X, Hu Z, Yang W, Jin J, Zhang Y, Zhang S. O-235 ACLY entry into the nucleus to bind with EP300 and regulate the genomic DNA and ribosomal DNA transcription during early embryonic development. Hum Reprod 2022. [DOI: 10.1093/humrep/deac106.017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Study question
ATP citrate lyase (ACLY) is one of the key enzymes to produce acetyl coenzyme A. What is its role in early embryonic development?
Summary answer
ACLY affected by activation of T447, S451 and S455 sites into nucleus and band with EP300 to affect genomic DNA and ribosomal DNA transcription.
What is known already
ACLY is one of the key enzymes to produce acetyl coenzyme A, which participates in fatty acid metabolism and regulates acetylation. Studies have found that ACLY knockout cells can survive, while the cell proliferation capacity will be weakened. ACLY is highly expressed in the cytoplasm of Hela cells colon cancer cells and other somatic cells. When AKT phosphorylates S455 site, ACLY enters the nucleus and participates in DNA damage repair. Its localization and role in embryos have not been studied. The only thing we know is homozygous mice could not be detected at E8.5 days after implantation.
Study design, size, duration
Twenty-four human day 6 developmentally arrested embryos were used to detect ACLY localization. Dozens of ACLY heterozygous female mice were used to test the time points of ACLY homozygous lethality after mating with heterozygous male mice. After zygotes were taken from wild-type C57BL6 mice, microinjection technology was used to explore the effects of knocking down ACLY, changing ACLY location or mutating ACLY. HeLa cells were used to explore at the molecular level.
Participants/materials, setting, methods
In this experiment, we used human abandoned or donated embryos, gene knockout mice, wild-type C57BL6 mice and Hela cell.
The experimental techniques used include in vitro embryo culture, EU staining, plasmid transfection, immunoprecipitation, western blot analysis, in vitro transcription, microinjection, immunofluorescence, RT-PCR and RNA-seq.
Main results and the role of chance
Firstly, our study found its special nuclear localization in early embryos for the first time and proved that its localization was related to embryonic development potential.
Secondly, the specific period of ACLY homozygous death was identified by ACLY heterozygous mice. And by knocking down ACLY or adding inhibitor SB204990, It was found that ACLY played an important role in cell proliferation, blastocyst formation and lineage differentiation of early embryo development.
Thirdly, we proved that ACLY nucleation played an important role in the development of early embryos. and the activated form of T447, S451 and S455 three sites led to ACLY nucleation.
Finally, we found that ACLY affected the level of histone acetylation and UBF acetylation. And then genomic DNA and ribosomal DNA transcription level were decreased. We further explored how the acetyl group produced by ACLY regulated transcription. The interaction between ACLY and EP300 was confirmed by immunofluorescence and COIP experiments. After knocking down EP300 in embryos or inhibiting its function with inhibitor c646, the results are consistent with knocking down ACLY. The above experimental data prove that ACLY affects histone acetylation level and regulates gene opening through the interaction with EP300.
Limitations, reasons for caution
We need to further explore the factors that promote ACLY into the nucleus, so as to add it to in vitro culture to enhance the embryonic development potential.
Wider implications of the findings
The study provides a new mechanism for insulin or lysophosphatidic acid to promote embryo development, and helps to improve the quality of embryo development in the process of embryo culture in vitro.
Trial registration number
not applicable
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Affiliation(s)
- Y Ma
- Assisted Reproduction Unit- Department of Obstetrics and Gynecology- Sir Run Run Shaw Hospital, School of Medicine- Zhejiang University , Hangzhou, China
| | - P Ren
- Assisted Reproduction Unit- Department of Obstetrics and Gynecology- Sir Run Run Shaw Hospital, School of Medicine- Zhejiang University , Hangzhou, China
| | - X Tong
- Assisted Reproduction Unit- Department of Obstetrics and Gynecology- Sir Run Run Shaw Hospital, School of Medicine- Zhejiang University , Hangzhou, China
| | - Z Hu
- Assisted Reproduction Unit- Department of Obstetrics and Gynecology- Sir Run Run Shaw Hospital, School of Medicine- Zhejiang University , Hangzhou, China
| | - W Yang
- Assisted Reproduction Unit- Department of Obstetrics and Gynecology- Sir Run Run Shaw Hospital, School of Medicine- Zhejiang University , Hangzhou, China
| | - J Jin
- Assisted Reproduction Unit- Department of Obstetrics and Gynecology- Sir Run Run Shaw Hospital, School of Medicine- Zhejiang University , Hangzhou, China
| | - Y Zhang
- Assisted Reproduction Unit- Department of Obstetrics and Gynecology- Sir Run Run Shaw Hospital, School of Medicine- Zhejiang University , Hangzhou, China
| | - S Zhang
- Assisted Reproduction Unit- Department of Obstetrics and Gynecology- Sir Run Run Shaw Hospital, School of Medicine- Zhejiang University , Hangzhou, China
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Ma FX, Ren P, Cao J, Bian YQ, Zhou JH, Zhao CY. [Clinical application of three-dimensional printed preformed titanium mesh combined with free latissimus dorsi muscle flap in the treatment of squamous cell carcinoma with skull defect in the vertex]. Zhonghua Shao Shang Yu Chuang Mian Xiu Fu Za Zhi 2022; 38:341-346. [PMID: 35462512 DOI: 10.3760/cma.j.cn501120-20201221-00538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Objective: To explore the clinical effects of three-dimensional printed preformed titanium mesh combined with latissimus dorsi muscle flap free transplantation in the treatment of wounds with skull defect after radical surgery of squamous cell carcinoma in the vertex. Methods: A retrospective observational study was conducted. From January 2010 to December 2019, 5 patients with squamous cell carcinoma in the vertex accompanied with skull invasion who met the inclusion criteria were admitted to the Department of Burns and Plastic Surgery of the Second Affiliated Hospital of Air Force Medical University, including four males and one female, aged 50 to 65 years. The original lesion areas ranged from 5 cm×4 cm to 15 cm×8 cm. The titanium mesh was prefabricated via three-dimensional technic based on the result the scope of skull resection predicted with computerized tomography three-dimensional reconstruction before surgery. During the first stage, the soft tissue defect area of scalp (8 cm×7 cm to 18 cm×11 cm) after tumor enlargement resection was repaired with the preformed titanium mesh, and the titanium mesh was covered with latissimus dorsi muscle flap, with area of 10 cm×9 cm to 20 cm×13 cm. The thoracodorsal artery/vein was anastomosed with the superficial temporal artery/vein on one side. The muscle ends in the donor site were sutured together or performed with transfixion, and then the skin on the back were covered back to the donor site. On the 10th day after the first-stage surgery, the second-stage surgery was performed. The thin intermediate thickness skin graft was taken from the anterolateral thigh to cover the latissimus dorsi muscle flap. The duration and intraoperative blood loss of first-stage surgery were recorded. The postoperative muscle flap survival after the first-stage surgery and skin graft survival after the second-stage surgery was observed. The occurrence of complications, head appearance, and recurrence of tumor were followed up. Results: The average first-stage surgery duration of patients was 12.1 h, and the intraoperative blood loss was not more than 1 200 mL. The muscle flaps in the first-stage surgery and the skin grafts in the second-stage surgery all survived well. During the follow-up of 6-18 months, no complications such as exposure of titanium mesh or infection occurred, with good shape in the recipient sites in the vertex, and no recurrence of tumor. Conclusions: Three-dimensional printed preformed titanium mesh combined with latissimus dorsi muscle flap free transplantation and intermediate thickness skin graft cover is an effective and reliable method for repairing the wound with skull defect after extended resection of squamous cell carcinoma in the vertex. This method can cover the wound effectively as well as promote both recipient and donor sites to obtain good function and appearance.
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Affiliation(s)
- F X Ma
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - P Ren
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - J Cao
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - Y Q Bian
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - J H Zhou
- Department of Neurosurgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - C Y Zhao
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
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Yu Z, Ren P, Zhang H, Chen H, Ma FX. [Research advances on application of botulinum toxin type A in scar prevention and treatment]. Zhonghua Shao Shang Yu Chuang Mian Xiu Fu Za Zhi 2022; 38:385-388. [PMID: 35462519 DOI: 10.3760/cma.j.cn501120-20210208-00054] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
The wound healing time, tension of wound edge, proliferation of fibroblast, and extracellular matrix deposition are the important factors of scar formation, and botulinum toxin type A can regulate the above. Prevention and treatment of scar with botulinum toxin type A is one of the hot topics of clinical research in recent years. This paper briefly reviews researches by scholars at home and abroad on the mechanism, clinical application, complications, and adverse effects of botulinum toxin type A in scar prevention and treatment.
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Affiliation(s)
- Z Yu
- The Plastic and Reconstructive Surgery Department of Xi'an People's Hospital (Xi'an Fourth Hospital), Xi'an 710004, China
| | - P Ren
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - H Zhang
- The Plastic and Reconstructive Surgery Department of Xi'an People's Hospital (Xi'an Fourth Hospital), Xi'an 710004, China
| | - H Chen
- The Plastic and Reconstructive Surgery Department of Xi'an People's Hospital (Xi'an Fourth Hospital), Xi'an 710004, China
| | - F X Ma
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
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Ren P, Cao J, Ma FX, Zhou S, Yu Z, Zhao CY. [Application effects of free transplantation of autologous omentum in treating maxillofacial infection complicated with complex sinus tract]. Zhonghua Shao Shang Za Zhi 2021; 37:953-958. [PMID: 34689465 DOI: 10.3760/cma.j.cn501120-20200721-00354] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Objective: To investigate the application effects of free transplantation of autologous omentum in treating maxillofacial infection complicated with complex sinus tract. Methods: The retrospective observational study method was used. Four patients with maxillofacial infection complicated with complex sinus tract were admitted to Department of Burns and Plastic Surgery of the Second Affiliated Hospital of Air Force Medical University from July 2017 to the December 2019, including 3 males and 1 female aged 36-60 years. Preoperative facial computed tomography (CT) was performed on patients for calculating the volume of sinus tract. During the operation, the sinus tract was thoroughly debrided, and the volume of the tissue defect was about 5 cm×3 cm×2 cm-10 cm×5 cm×3 cm after debridement. The tissue defect area was filled with omentum of 100-300 mL which was cut under laparoscopy. The artery and vein on the right side of the omentum were reserved as the vascular pedicle of the donor area, which were anastomosed with the facial artery and external jugular vein of the recipient area. The survival of omentum, and the occurrences of reinfection and complication were observed after operation, respectively. On the 10th day and in 1 month after the operation, the blood supply of omentum was examined by colored Doppler ultrasound and CT angiography, and the filling of tissue defect area was examined by head and face CT. During follow-up after the operation, the recoveries of face appearance and function and scar hyperplasia in the donor area. Results: The transplanted omentums in 4 patients survived after the operation with no reinfection and complication. On the 10th day and in 1 month after the operation, the transplanted omentums had good blood supply, and the filled area with omentum was in good shape, without formation of dead cavity. During follow-up of 6-10 months after surgery, the appearance and function of face recovered well, and there was no obvious scar hyperplasia in the donor area. Conclusions: After free transplantation of omentum in treating maxillofacial infection with complex sinus tract, the patients have good facial appearance and function, and the application of laparoscopy results in little damage to the patients and quick postoperative recovery.
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Affiliation(s)
- P Ren
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - J Cao
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - F X Ma
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - S Zhou
- Department of General Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - Z Yu
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
| | - C Y Zhao
- Department of Burns and Plastic Surgery, the Second Affiliated Hospital of Air Force Medical University, Xi'an 710038, China
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Deng X, Ren P, Mai W, Fu T, Zhang H, Cai X, Wang L. Development of a Recycling Process for an Industrial-Scale Production of Tipifarnib. Org Process Res Dev 2021. [DOI: 10.1021/acs.oprd.1c00132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Xiaohu Deng
- Kura Oncology Inc., 12730 High Bluff Drive, Suite 400, San Diego, California 92130, United States
| | - Pingda Ren
- Kura Oncology Inc., 12730 High Bluff Drive, Suite 400, San Diego, California 92130, United States
| | - Wanping Mai
- Kura Oncology Inc., 12730 High Bluff Drive, Suite 400, San Diego, California 92130, United States
| | - Thomas Fu
- Kura Oncology Inc., 12730 High Bluff Drive, Suite 400, San Diego, California 92130, United States
| | - Hang Zhang
- STA Pharmaceutical Co., Ltd., (“WuXi STA”), a WuXi AppTec Company, 90 Delin Road, Waigaoqiao Pilot Free Trade Zone, Shanghai 200131, China
| | - Xianfeng Cai
- STA Pharmaceutical Co., Ltd., (“WuXi STA”), a WuXi AppTec Company, 90 Delin Road, Waigaoqiao Pilot Free Trade Zone, Shanghai 200131, China
| | - Lu Wang
- STA Pharmaceutical Co., Ltd., (“WuXi STA”), a WuXi AppTec Company, 90 Delin Road, Waigaoqiao Pilot Free Trade Zone, Shanghai 200131, China
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Affiliation(s)
- Bo Mei
- WuXi AppTec Co., Ltd., 288 Fute Zhong Road, Waigaoqiao Pilot Free Trade
Zone, Shanghai 200131, China
| | - Linrong Zhu
- WuXi AppTec Co., Ltd., 288 Fute Zhong Road, Waigaoqiao Pilot Free Trade
Zone, Shanghai 200131, China
| | - Yushen Guo
- WuXi AppTec Co., Ltd., 288 Fute Zhong Road, Waigaoqiao Pilot Free Trade
Zone, Shanghai 200131, China
| | - Tao Wu
- Wellspring Biosciences Inc., 10770 Wateridge Cir UNIT 120, San Diego, California 92121, United States
| | - Pingda Ren
- Kura Oncology Inc., 12730 High Bluff Drive, Suite 400, San Diego, California 92130, United States
| | - Xiaohu Deng
- Kura Oncology Inc., 12730 High Bluff Drive, Suite 400, San Diego, California 92130, United States
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Deng X, Ren P, Mai W, Wang Y, Zhang Y, Wu H, Xie Y, Chen H. From Lab Formulation Development to CTM Manufacturing of KO-947 Injectable Drug Products: a Case Study and Lessons Learned. AAPS PharmSciTech 2021; 22:168. [PMID: 34080070 DOI: 10.1208/s12249-021-02059-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Accepted: 05/15/2021] [Indexed: 01/27/2023] Open
Abstract
Formulation development of KO-947-K mesylate injectable drug products was described. Solution formulations were initially attempted, and key parameters such as drug concentration, buffer, pH, complexing agent, and tonicity modifying agent were carefully evaluated in the lab setting, mainly focusing on solubility and chemical stability. A lead solution formulation was advanced to a scaleup campaign. An unexpected stability issue was encountered, and the root cause was attributed to the heterogeneous liquid freezing process of the formulated solution at -20°C, which had not been captured in the lab setting. A lyophilized product was then designed to overcome the issue and supplied to the phase I clinical trial.
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Ren P, Zhang H, Chang L, Hong XD, Xing L. LncRNA NR2F1-AS1 promotes proliferation and metastasis of ESCC cells via regulating EMT. Eur Rev Med Pharmacol Sci 2021; 24:3686-3693. [PMID: 32329844 DOI: 10.26355/eurrev_202004_20831] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
OBJECTIVE The aim of this study was to explore the expression of long non-coding ribonucleic acid (lncRNA) nuclear receptor subfamily 2 group F member 1-antisense RNA 1 (NR2F1-AS1) in esophageal squamous cell carcinoma (ESCC) tissues and cells and to investigate its effects on ESCC proliferation and metastasis. PATIENTS AND METHODS The expression level of NR2F1-AS1 in 51 pairs of ESCC tissues and corresponding adjacent tissues was detected via quantitative Reverse Transcription-Polymerase Chain Reaction (qRT-PCR). Meanwhile, NR2F1-AS1 expression in ESCC cells was measured via qRT-PCR as well. Subsequently, specific interference sequences of NR2F1-AS1 were designed, synthesized, and transiently transfected into ESCC cells. 48 h later, qRT-PCR assay was performed to detect the interference efficiency. The effects of small interfering (si)-NR2F1-AS1 on the proliferation of ESCC cells were determined through cell counting kit-8 (CCK-8) and colony formation assay. Wound healing and transwell assays were conducted to investigate the influences of si-NR2F1-AS1 on the migration and invasion of ESCC cells. Additionally, the changes in the expressions of epithelial-mesenchymal transition (EMT) molecular markers were detected by Western blotting. RESULTS QRT-PCR assay revealed that the expression level of NR2F1-AS1 was significantly up-regulated in 42 of 51 cases of ESCC tissues (42/51, 82.4%). Compared with esophageal mucosal epithelial HET-1A cells, NR2FA-AS1 was highly expressed in ESCC cells. CCK-8 and colony formation assay indicated that the proliferation of ESCC cells decreased remarkably after interference in NR2F1-AS1 expression. The results of wound healing and transwell assays showed that the migration and metastasis of cells were significantly lower in si-NR2F1-AS1 group than those in si-NC group. Western blotting demonstrated that the expressions of EMT molecular markers were changed after interfering with NR2F1-AS1 expression. CONCLUSIONS NR2F1-AS1 was highly expressed in ESCC tissues and cells. Furthermore, high expression of NR2F1-AS1 promoted the proliferation and metastasis of ESCC cells by modulating EMT.
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Affiliation(s)
- P Ren
- Department of Thoracic Surgery, The First Hospital of Jilin University, Changchun, China.
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Wang N, Yang CQ, Wu XM, Ren P, Zhang SY, Pang B, Yuan YL, Liu GJ, Gu C. [Comparison and application of postprandial and fasting blood lipid levels in 839 physical examinees in Beijing]. Zhonghua Yu Fang Yi Xue Za Zhi 2021; 55:245-252. [PMID: 34645187 DOI: 10.3760/cma.j.cn112150-20200512-00719] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Objective: To investigate the feasibility of application of non-fasting dyslipidemia cutoff values in community population. Methods: Self-control study was used. 839 physical examinees (292 males and 547 females) were recruited in clinical laboratory of Guang'an men Hospital from January to October 2018. The median (interquartile range) of age was 60 (54, 66) years. Blood samples were collected before and at 4 h after a standard breakfast. Comparison of fasting and postprandial lipoprotein levels was performed using Paired-Samples T Test or Two-Related-Samples Wilcoxon. The changes of 4-hour postprandial blood lipid levels and the percentages of postprandial dyslipidemia according to different stratification of fasting dyslipidemia were performed using one-way ANOVA and χ2 test, respectively. Results: Compared with fasting, 4-hour postprandial total cholesterol (TC), low density lipoprotein cholesterol (LDL-C), high density lipoprotein cholesterol (HDL-C), non-high density lipoprotein cholesterol (non-HDL-C), apolipoprotein A1 (ApoA1) and apolipoprotein B (ApoB) decreased slightly, postprandial triglyceride (TG) increased by 0.72 mmol/L, and postprandial remnant-like lipoprotein cholesterol (RLP-C) increased by 0.27 mmol/L (t or Z values = 10.26,22.94,24.22,4.71,16.61,26.92,-23.58,-19.35, P<0.05, respectively). According to the non-fasting dyslipidemia cut-off values recommended by the European consensus, there were 10%, 16.6%, 10.1%, 12.3%, 30% and 34.9% of the population in the appropriate levels of fasting TC, LDL-C, HDL-C, non-HDL-C, TG and RLP-C distributed in elevated levels of postprandial, respectively. The changes of 4-hour postprandial TC, LDL-C, non-HDL-C and HDL-C increased with the elevation of fasting level (F=9.50,6.18,8.07,3.86,P<0.01), and the maximum changes of TC≤3.5%, LDL-C≤6.8%, non-HDL-C≤2.9%, HDL-C≤6.3%; the change of 4-hour postprandial TG increased slightly first and then decreased significantly (51.3% vs. 57.9% vs. 39.2%, F=19.05, P<0.01); the change of 4-hour postprandial RLP-C decreased (50.8% vs. 33.2%, F=10.40, P<0.01). The cut-off values of 4-hour postprandial dyslipidemia were TC ≥5.1 mmol/L, LDL-C ≥3.2 mmol/L, HDL-C ≤0.9 mmol/L, non-HDL-C ≥4.0 mmol/L and RLP-C ≥1.0 mmol/L. The cut-off values of borderline elevated and elevated TG levels were ≥2.2 mmol/L and ≥3.4 mmol/L, respectively. Conclusions: The cut-off values of postprandial dyslipidemia including TC, LDL-C, HDL-C, non-HDL-C and RLP-C were preliminarily established in community population, which could be applied to the routine lipid profile evaluation in the physical examination population. And it might be needed that postprandial TG was managed hierarchically according to different cut-off values.
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Affiliation(s)
- N Wang
- Department of Laboratory Medicine, Guang'anmen South Area Hospital, Chinese Academy of Chinese Medical Science, Beijing 102618, China
| | - C Q Yang
- Department of Laboratory Medicine, Guang'anmen Hospital, Chinese Academy of Chinese Medical Science, Beijing 100053, China
| | - X M Wu
- Department of Laboratory Medicine, Guang'anmen South Area Hospital, Chinese Academy of Chinese Medical Science, Beijing 102618, China
| | - P Ren
- Department of Laboratory Medicine, Guang'anmen Hospital, Chinese Academy of Chinese Medical Science, Beijing 100053, China
| | - S Y Zhang
- Department of Laboratory Medicine, Guang'anmen South Area Hospital, Chinese Academy of Chinese Medical Science, Beijing 102618, China
| | - B Pang
- Department of Laboratory Medicine, Guang'anmen Hospital, Chinese Academy of Chinese Medical Science, Beijing 100053, China
| | - Y L Yuan
- Department of Laboratory Medicine, Guang'anmen South Area Hospital, Chinese Academy of Chinese Medical Science, Beijing 102618, China
| | - G J Liu
- Department of Laboratory Medicine, Guang'anmen Hospital, Chinese Academy of Chinese Medical Science, Beijing 100053, China
| | - C Gu
- Department of Laboratory Medicine, Guang'anmen Hospital, Chinese Academy of Chinese Medical Science, Beijing 100053, China
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Klossowski S, Miao H, Kempinska K, Wu T, Purohit T, Kim E, Linhares BM, Chen D, Jih G, Perkey E, Huang H, He M, Wen B, Wang Y, Yu K, Lee SCW, Danet-Desnoyers G, Trotman W, Kandarpa M, Cotton A, Abdel-Wahab O, Lei H, Dou Y, Guzman M, Peterson L, Gruber T, Choi S, Sun D, Ren P, Li LS, Liu Y, Burrows F, Maillard I, Cierpicki T, Grembecka J. Menin inhibitor MI-3454 induces remission in MLL1-rearranged and NPM1-mutated models of leukemia. J Clin Invest 2020; 130:981-997. [PMID: 31855575 DOI: 10.1172/jci129126] [Citation(s) in RCA: 137] [Impact Index Per Article: 34.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2019] [Accepted: 11/06/2019] [Indexed: 12/31/2022] Open
Abstract
The protein-protein interaction between menin and mixed lineage leukemia 1 (MLL1) plays a critical role in acute leukemias with translocations of the MLL1 gene or with mutations in the nucleophosmin 1 (NPM1) gene. As a step toward clinical translation of menin-MLL1 inhibitors, we report development of MI-3454, a highly potent and orally bioavailable inhibitor of the menin-MLL1 interaction. MI-3454 profoundly inhibited proliferation and induced differentiation in acute leukemia cells and primary patient samples with MLL1 translocations or NPM1 mutations. When applied as a single agent, MI-3454 induced complete remission or regression of leukemia in mouse models of MLL1-rearranged or NPM1-mutated leukemia, including patient-derived xenograft models, through downregulation of key genes involved in leukemogenesis. We also identified MEIS1 as a potential pharmacodynamic biomarker of treatment response with MI-3454 in leukemia, and demonstrated that this compound is well tolerated and did not impair normal hematopoiesis in mice. Overall, this study demonstrates, for the first time to our knowledge, profound activity of the menin-MLL1 inhibitor as a single agent in clinically relevant PDX models of leukemia. These data provide a strong rationale for clinical translation of MI-3454 or its analogs for leukemia patients with MLL1 rearrangements or NPM1 mutations.
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Affiliation(s)
- Szymon Klossowski
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | - Hongzhi Miao
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | | | - Tao Wu
- Wellspring Biosciences, Inc., San Diego, California, USA
| | - Trupta Purohit
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | - EunGi Kim
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | - Brian M Linhares
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | - Dong Chen
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | | | | | - Huang Huang
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | - Miao He
- College of Pharmacy, University of Michigan, Ann Arbor, Michigan, USA
| | - Bo Wen
- College of Pharmacy, University of Michigan, Ann Arbor, Michigan, USA
| | - Yi Wang
- Wellspring Biosciences, Inc., San Diego, California, USA
| | - Ke Yu
- Wellspring Biosciences, Inc., San Diego, California, USA
| | | | - Gwenn Danet-Desnoyers
- Division of Hematology-Oncology, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA
| | - Winifred Trotman
- Division of Hematology-Oncology, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA
| | - Malathi Kandarpa
- Division of Hematology/Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan, USA
| | | | | | - Hongwei Lei
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | - Yali Dou
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | | | - Luke Peterson
- Division of Hematology/Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan, USA
| | - Tanja Gruber
- Saint Jude Children's Hospital, Memphis, Tennessee, USA
| | - Sarah Choi
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | - Duxin Sun
- College of Pharmacy, University of Michigan, Ann Arbor, Michigan, USA
| | - Pingda Ren
- Wellspring Biosciences, Inc., San Diego, California, USA.,Kura Oncology, Inc., San Diego, California, USA
| | - Lian-Sheng Li
- Wellspring Biosciences, Inc., San Diego, California, USA
| | - Yi Liu
- Wellspring Biosciences, Inc., San Diego, California, USA
| | | | - Ivan Maillard
- Life Sciences Institute and.,Division of Hematology-Oncology, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA
| | - Tomasz Cierpicki
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
| | - Jolanta Grembecka
- Department of Pathology, University of Michigan, Ann Arbor, Michigan, USA
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LI D, Wen E, Zhang Y, Ren P, Shang C, He L, Zhang J, Xiang L, Yang H, Liu Q, Wen Q, Fan J, Lin S, Bo W. The 2-year Results of Phase II Clinical Trial of Brachytherapy with Single-Channel Applicator For Cervical Carcinoma. Int J Radiat Oncol Biol Phys 2019. [DOI: 10.1016/j.ijrobp.2019.06.1813] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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15
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Xiang L, Wu J, Yang H, Lin S, Zhang J, Wen Q, Ren P, Pang H. Four-Year Outcome after Reduction of the Target Volume of Intensity Modulated Radiotherapy Following Induction Chemotherapy in Locoregionally Advanced Nasopharyngeal Carcinoma: A Phase III, Multicentre, Randomised Controlled Trial. Int J Radiat Oncol Biol Phys 2019. [DOI: 10.1016/j.ijrobp.2019.06.414] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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16
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Xiang L, Ren P, Lin S, Zhang J, Pang H, Wu J. 5-Fluorouracil Combined with Cisplatin Via Arterial Induction for Advanced T-Stage Nasopharyngeal Carcinoma: A 10-Year Outcome Study. Int J Radiat Oncol Biol Phys 2019. [DOI: 10.1016/j.ijrobp.2019.06.1577] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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17
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Lu D, Liu X, Feng S, Dong X, Shi X, Ji X, Fang T, Wang Z, Hong Z, Ye Y, Ren P, Diao D, Wu H, Xiong G, Wang H, Li M, Cai K. IDENTIFICATION OF THE RELATIVELY FIXED INTRATHORACIC ANATOMICAL LANDMARKS FOR ESOPHAGEAL SEGMENTATION: A CROSS-SECTIONAL SURVEY FROM SOUTHERN CHINA. Chest 2019. [DOI: 10.1016/j.chest.2019.02.139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022] Open
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18
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Jang K, Kim J, Purvis N, Purvis J, Chen J, Ren P, Vazquez M, Kim S. 152 Supplemental effects of chelated trace minerals replacing inorganic trace minerals in sow diets on production performance, DNA methylation, histone acetylation, and gene expression in muscle and intestinal tissues of progeny. J Anim Sci 2018. [DOI: 10.1093/jas/sky404.632] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- K Jang
- North Carolina State University,Raleigh, NC, United States
| | - J Kim
- North Carolina State University,Raleigh, NC, United States
| | - N Purvis
- NG Purvis Farm Inc.,Robbins, NC, United States
| | - J Purvis
- NG Purvis Farm Inc.,Robbins, NC, United States
| | - J Chen
- Novus International, Inc., Saint Charles, MO, United States
| | - P Ren
- Novus International, Inc., Saint Charles, MO, United States
| | - M Vazquez
- Novus International, Inc., Saint Charles, MO, United States
| | - S Kim
- North Carolina State University,Raleigh, NC, United States
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Li X, Bo W, Lin S, Zhang J, Wen Q, Yang B, Ren P, Pang H. A Phase I//II Study of Computed Tomography-Guided Interstitial High-Dose-Rate Brachytherapy in Combination with Regional Positive Lymph Node Intensity-Modulated Radiation Therapy for Locally Advanced Peripheral Non-Small Cell Lung Cancer. Int J Radiat Oncol Biol Phys 2018. [DOI: 10.1016/j.ijrobp.2018.07.1864] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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20
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Li X, Bo W, Ren P, Pang H, Wen Q, Lin S. 5-Fu Continuously Pump Infusion Via Superficial Temporal Artery Cannula for High T Staged Nasopharyngeal Carcinoma: A Phase I Clinical Trial. Int J Radiat Oncol Biol Phys 2018. [DOI: 10.1016/j.ijrobp.2018.07.1016] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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21
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Lu D, Dong X, Feng S, Liu X, Shi X, Wu H, Diao D, Ren P, Cai R, Huang Z, Wang H, Cai K, Xin X, Ji H, Wang Z, Hong C, Sun Y, Yu X. P1.05-09 Dielectric Property Test for the Rapid Differential Diagnosis of Lung Nodules/Mass. J Thorac Oncol 2018. [DOI: 10.1016/j.jtho.2018.08.761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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22
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Yuan J, Yin XN, Ren P, Fu YJ. [Inflammatory myofibroblastic tumor of the uterus: report of a case]. Zhonghua Bing Li Xue Za Zhi 2018; 47:727-728. [PMID: 30220133 DOI: 10.3760/cma.j.issn.0529-5807.2018.09.018] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
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23
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Li L, Janes MR, Zhang J, Hansen R, Peters U, Guo X, Chen Y, Babbar A, Firdaus SJ, Feng J, Chen JH, Li S, Li S, Thach C, Liu Y, Zarieh A, Kucharski JM, Wu T, Yu K, Wang Y, Yao Y, Deng X, Zarrinkar PP, Dhanak D, Lorenzi MV, Hu-Lowe D, Ren P, Liu Y. Abstract 929: Discovery of novel covalent KRASG12C inhibitors that display high potency and selectivity in vitro and in vivo. Cancer Res 2018. [DOI: 10.1158/1538-7445.am2018-929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
Activating mutations in KRAS have a high prevalence in human cancer. The codon 12 glycine to cysteine missense mutation (KRASG12C) is among the most common KRAS mutations, present in non-small cell lung adenocarcinoma (~15 %), colorectal adenocarcinoma (~3 %), and pancreatic adenocarcinoma (~1 %). KRASG12C was previously identified as potentially druggable by allele-specific covalent targeting of cysteine 12 near the allosteric switch II pocket (S-IIP). Building on this early work, we recently described the ARS-853 series of S-IIP KRASG12C inhibitors that covalently react with the GDP-bound state of KRASG12C, trapping KRASG12C in this inactive state. In cells, ARS-853 series compounds profoundly deplete the signaling competent GTP-bound state of KRASG12C, thereby inhibiting downstream RAS signaling. However, this series of covalent KRASG12C inhibitors exhibited modest cellular potency and/or poor pharmacokinetic properties, making them unsuitable for further evaluation of covalent KRASG12C inhibition in animal models.
We now describe in further detail the discovery and characterization of a new series of structurally distinct quinazoline based S-IIP KRASG12C inhibitors with substantially improved potency and pharmacologic properties that overcome limitations of the ARS-853 series. Through structure-guided medicinal chemistry optimization we identified compound ARS-1620, a potent, orally bioavailable covalent inhibitor of KRASG12C. The co-crystal structure of ARS-1620 covalently bound to KRASG12C reveals a distinct binding mode and additional interactions, compared to ARS-853. ARS-1620 rapidly engages KRASG12C, depletes KRASG12C-GTP in tumor cell lines, and inhibits downstream RAS signaling in a dose-dependent manner. The compound potently inhibits the growth of cell lines harboring the KRASG12C mutation with little or no effect on control cell lines. ARS-1620 demonstrates robust dose-dependent efficacy with once daily oral administration across a panel of KRASG12C-positive mouse cell line (CDX) and patient-derived (PDX) tumor xenograft models, with no response observed at all doses tested in KRASG12C-negative tumor models. The anti-tumor activity of ARS-1620 correlates with target engagement in the tumors as well as with inhibition of downstream RAS signaling. The in vivo efficacy and mutant selectivity observed with ARS-1620 across a wide range of KRASG12C mouse tumor models provides the first in vivo evidence that the S-IIP targeted approach may be a promising therapeutic strategy for patients with KRASG12C mutant cancers.
Citation Format: Liansheng Li, Matthew R. Janes, Jingchuan Zhang, Rasmus Hansen, Ulf Peters, Xin Guo, Yuching Chen, Anjali Babbar, Sarah J. Firdaus, Jun Feng, Jeffrey H. Chen, Shuangwei Li, Shisheng Li, Carol Thach, Yuan Liu, Ata Zarieh, Jeff M. Kucharski, Tao Wu, Ke Yu, Yi Wang, Yvonne Yao, Xiaohu Deng, Patrick P. Zarrinkar, Dashyant Dhanak, Matthew V. Lorenzi, Dana Hu-Lowe, Pingda Ren, Yi Liu. Discovery of novel covalent KRASG12C inhibitors that display high potency and selectivity in vitro and in vivo [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2018; 2018 Apr 14-18; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2018;78(13 Suppl):Abstract nr 929.
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Affiliation(s)
| | | | | | | | - Ulf Peters
- 1Wellspring Biosciences, Inc., San Diego, CA
| | - Xin Guo
- 1Wellspring Biosciences, Inc., San Diego, CA
| | | | | | | | - Jun Feng
- 1Wellspring Biosciences, Inc., San Diego, CA
| | | | | | - Shisheng Li
- 1Wellspring Biosciences, Inc., San Diego, CA
| | - Carol Thach
- 1Wellspring Biosciences, Inc., San Diego, CA
| | - Yuan Liu
- 1Wellspring Biosciences, Inc., San Diego, CA
| | - Ata Zarieh
- 1Wellspring Biosciences, Inc., San Diego, CA
| | | | - Tao Wu
- 1Wellspring Biosciences, Inc., San Diego, CA
| | - Ke Yu
- 1Wellspring Biosciences, Inc., San Diego, CA
| | - Yi Wang
- 1Wellspring Biosciences, Inc., San Diego, CA
| | - Yvonne Yao
- 1Wellspring Biosciences, Inc., San Diego, CA
| | | | | | | | | | | | | | - Yi Liu
- 2Kura Oncology, Inc., San Diego, CA
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Hansen R, Peters U, Babbar A, Chen Y, Feng J, Janes MR, Li L, Ren P, Liu Y, Zarrinkar PP. Abstract 686: Drugging an undruggable pocket: The biochemical mechanism of covalent KRASG12C inhibitors. Cancer Res 2018. [DOI: 10.1158/1538-7445.am2018-686] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
We describe the biochemical mechanism of the covalent KRASG12C inhibitors ARS-853 and ARS-1620. Activating mutations in KRAS are among the most common mutations found in cancer. The KRASG12C mutation in particular is observed in approximately 15 % of non-small cell lung adenocarcinoma, 3 % of colorectal adenocarcinoma and 1 % of pancreatic adenocarcinoma. Until recently, KRAS had been considered undruggable due to the lack of clearly defined pockets that might support binding of small molecules, and the difficulty of targeting the nucleotide binding site due to the high affinity of GDP and GTP. However several years ago small molecules were discovered that bind an inducible pocket near the switch II region and covalently target the mutated cysteine in KRASG12C, trapping KRASG12C in a nonproductive GDP-bound state. Subsequent optimization of these compounds yielded the recently described inhibitors ARS-853 and ARS-1620, the first compounds that directly inhibit KRAS with high potency in cells and animals. While the biological activity of the inhibitors has been described, the biochemical mechanism of how the compounds achieve potent inhibition remained incompletely understood. We now show through biochemical kinetics studies that the activity of ARS-853 and ARS-1620 is primarily driven by KRAS-mediated catalysis of the chemical step of covalent bond formation with cysteine 12 in KRASG12C, rather than by high reversible binding affinity. The reversible inhibition constant (Ki) for both ARS-853 and ARS-1620 is well above the highest compound concentration tested (64 µM, to avoid solubility limitations), likely in the hundreds of micromolar range, while the rate of the chemical step (kinact) is fast. We confirm by several independent means that there is no detectable reversible binding affinity of the inhibitors for KRAS up to at least 32 µM, and show that the rapid chemical reaction is not due to high inherent reactivity of cysteine 12 in KRAS, nor to high intrinsic reactivity of the inhibitors. The results imply that the inhibitors do bind reversibly to KRAS to enable bond formation, but that binding is weak and primarily serves to orient the electrophile. The KRAS-dependent activation of covalent bond formation of ARS-853 and ARS-1620 with the mutated cysteine 12 is reminiscent of mechanism-based or suicide covalent enzyme inhibition, and explains both the high selectivity of the inhibitors for this cysteine relative to other cellular cysteines, and their potent overall activity despite exhibiting poor reversible affinity. The mechanism described here therefore resolves how an induced, shallow and dynamic pocket that is not expected to support high affinity binding of small molecules can nevertheless be targeted with potent inhibitors, and may be applicable to other targets conventionally considered undruggable.
Citation Format: Rasmus Hansen, Ulf Peters, Anjali Babbar, Yuching Chen, Jun Feng, Matthew R. Janes, Liansheng Li, Pingda Ren, Yi Liu, Patrick P. Zarrinkar. Drugging an undruggable pocket: The biochemical mechanism of covalent KRASG12C inhibitors [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2018; 2018 Apr 14-18; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2018;78(13 Suppl):Abstract nr 686.
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Affiliation(s)
| | - Ulf Peters
- 1Wellspring Biosciences, Inc., San Diego, CA
| | | | | | - Jun Feng
- 1Wellspring Biosciences, Inc., San Diego, CA
| | | | | | | | - Yi Liu
- 2Kura Oncology, Inc., San Diego, CA
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25
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Burrows FJ, Kessler L, Wu T, Gao X, Chen J, Hansen R, Li S, Thach C, Li S, Yu K, Kucharski J, Peters U, Feng J, Wang Y, Yao Y, Zarieh A, Janes M, Zhang J, Li L, Hu-Lowe D, Ren P, Liu Y. Abstract 3885: 11q13 amplification selects for sensitivity to the ERK inhibitor KO-947 in squamous cell carcinomas. Cancer Res 2018. [DOI: 10.1158/1538-7445.am2018-3885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
The MAPK pathway is a major driver of malignant progression, particularly in cancers arising from mutations in pathway components, and BRAF and MEK inhibitors have been approved for treatment of BRAF-mutant melanoma. ERK1/2 kinases are the final node in the MAPK signaling pathway and offer the possibility of clinical benefit in settings where earlier drugs are ineffective. We have previously reported that KO-947, a potent and selective inhibitor of ERK1/2 with extended target residence time and favorable pharmaceutic properties, displays robust single-agent antitumor activity in PDX models of adenocarcinomas with RAS/RAF mutations, and in squamous cell carcinomas (SCCs) that lack mutations in MAPK pathway components. Here we report the discovery of a novel biomarker that is associated with sensitivity to KO-947 in head and neck SCC and esophageal SCC PDX models. Recurring amplification of chromosome 11 between bands q13.3 and q13.4 is a feature of several tumor types, including ESCC and HNSCC. TCGA reports incidence rates of >50% in ESCC and ~20% in HNSCC, although higher frequencies are seen in some subtypes, such as pharyngeal and HPV-negative SCC. The 11q13 amplicon commonly contains about a dozen genes, including several potential oncogenes with functional linkage to the MAPK pathway, such as CCND1, FADD and the recently described calcium-dependent chloride channel ANO1. PDX campaigns were carried out in 24 ESCC and 18 HNSCC models, including 16 and 7 of each with 11q13 amplification, respectively. Groups of three animals were dosed with KO-947 at 300mg/kg QW, tumor growth was monitored for 3-6 weeks and responses were categorized as progressive disease, stable disease (SD, >80% TGI) or partial/complete response (PR/CR, >30% regression). In ESCC tumor-bearing animals, the overall response rates (ORR = PR+CR) were 33% in the overall population, 51% in the 11q13-amplified (11q-AMP) and 3% in 11q13-WT. The disease control rates (DCR = PR/CR+SD) were 54% overall, 77% in 11q-AMP and 21% in 11q-WT. In HNSCC tumor-bearing animals, the ORRs were 24% in the overall population, 56% in 11q-AMP and 9% in 11q-WT, with DCRs of 40%, 69% and 26% in the three subsets, respectively. 11q-AMP was significantly associated with response to KO-947 in both tumor types. ROC analysis defined the minimum effective copy number as 4 and revealed significant associations between expression levels of several 11q13 amplicon genes and response to KO-947. A key role for ANO1 in driving ERK-dependent tumor growth in 11q-AMP cases was further indicated by the observation that ANO1 expression was silenced in some 11q-AMP models and these tumors failed to respond the ERK inhibition. The results suggest that 11q13 amplification in SCCs can drive tumor growth and survival in a MAPK-dependent manner and that 11q-AMP may be a useful biomarker for predicting clinical response to ERK inhibitors.
Citation Format: Francis J. Burrows, Linda Kessler, Tao Wu, Xin Gao, Jeffrey Chen, Rasmus Hansen, Shuangwei Li, Carol Thach, Shisheng Li, Ke Yu, Jeff Kucharski, Ulf Peters, Jun Feng, Yi Wang, Yvonne Yao, Ata Zarieh, Matt Janes, Jingchuan Zhang, Liansheng Li, Dana Hu-Lowe, Pingda Ren, Yi Liu. 11q13 amplification selects for sensitivity to the ERK inhibitor KO-947 in squamous cell carcinomas [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2018; 2018 Apr 14-18; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2018;78(13 Suppl):Abstract nr 3885.
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Affiliation(s)
| | | | - Tao Wu
- 2Wellspring Biosciences, San Diego, CA
| | - Xin Gao
- 2Wellspring Biosciences, San Diego, CA
| | | | | | | | | | | | - Ke Yu
- 2Wellspring Biosciences, San Diego, CA
| | | | | | - Jun Feng
- 2Wellspring Biosciences, San Diego, CA
| | - Yi Wang
- 2Wellspring Biosciences, San Diego, CA
| | | | | | | | | | | | | | | | - Yi Liu
- 1Kura Oncology, San Diego, CA
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Ren P, Orlando UAD, Goncalves MAD, Vázquez-Añón M. 209 Effects of Increasing Ratios of Standardized Ileal Digestible Total Sulfur Amino Acid to Lysine on Growth Performance of 7 to 17 Kg Pigs Under Antibiotics or Antibiotics-Free Regime. J Anim Sci 2018. [DOI: 10.1093/jas/sky073.206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- P Ren
- Novus International Inc., St. Charles, MO
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Zhong H, Ma R, Gong L, Chen CG, Tang P, Ren P, Jiang HJ, Yu ZT. [Comparison of the prognostic value of the seventh and eighth edition of The AJCC Esophageal Cancer Staging System for the patients with stage Ⅱ and Ⅲesophageal squamous cell carcinoma]. Zhonghua Wai Ke Za Zhi 2018; 55:903-908. [PMID: 29224264 DOI: 10.3760/cma.j.issn.0529-5815.2017.12.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Objective: To compare and evaluate the prognostic value of the 7(th) and 8(th) edition of The AJCC Esophageal Cancer Staging System for patients with stage Ⅱ and Ⅲ esophageal squamous cell carcinoma. Methods: The clinical data of 328 esophageal cancer patients who received operation at Department of Esophageal Cancer, Tianjin Tumour Hospital from January 2006 to December 2010 were restrospectively analyzed. There were 63 female and 265 male patients. The mean age was 65 (range: 33 to 87) years. Univariate and multivariate analysis were performed to identify the prognosis factors. Results: The five years overall survival rates among patients with stage Ⅱ and Ⅲ were both significantly different (χ(2)=87.035, 84.730, all P=0.000) according to the 7(th) and 8(th) editions of the TNM staging systems. The five years overall survival rate among patients with stage ⅡB and ⅢA were significantly different (39.6% vs 23.4%, P=0.001) according to the 7(th) edition of the esophageal cancer staging systems.According to the 8(th) edition of the esophageal cancer staging system, the 5 years survival rate of patients with stage ⅡA and ⅡB, ⅢB and Ⅳ was statistically significant (58.5% vs. 35.5%, P=0.040; 18.9% vs. 0, P=0.000). In multivariate analysis, tumor size, T staging, N staging and tumor differentiation (HR=1.592, 95%CI: 1.185 to 2.139, P=0.002; HR=1.519, 95% CI: 1.236 to 1.867, P=0.000; HR=1.647, 95% CI: 1.448 to 1.874, P=0.000; HR=1.404, 95% CI: 1.059 to 1.861, P=0.018) were the main independent prognosis factors affecting the prognosis of esophageal squamous cell carcinoma patients. Conclusions: Both the 7(th) and the 8(th) editions of TNM staging systems are able to reflect the clinical prognosis of patients receiving radical resection of esophageal cancer, and the factors of tumor size, differentiaton, invasion depth and lymph node metastases are the independent predictors of prognosis. The 8(th) edition provides a more detailed and more reasonable for the staging of stage Ⅱ and Ⅲ for esophageal cancer patients than the 7(th) edition, and it is more accurate for the prognosis of patients with esophageal cancer after surgery.
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Affiliation(s)
- H Zhong
- Department of Esophageal Cancer, Tianjin Medical University Cancer Institute and Hospital, National Clinical Research Center for Cancer, Key Laboratory of Cancer Prevention and Therapy, Tianjin 300060, China
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Zhang J, Hu Y, Wang H, Guo A, Kong J, Ma R, Wu T, Wang Y, Li LS, Mai W, Ren P, Deng X. Regioselective Functionalization of 4-Methyl-1H-indole for Scalable Synthesis of 2-Cyano-5-formyl-4-methyl-1H-indole. Org Process Res Dev 2018. [DOI: 10.1021/acs.oprd.7b00370] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Jun Zhang
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Yun Hu
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Haiyu Wang
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Aixin Guo
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Jianshe Kong
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Rujian Ma
- WuXi AppTec Co., Ltd., 168 Nanhai Road, TEDA, Tianjin 300457, China
| | - Tao Wu
- Wellspring Biosciences
Inc., 3033 Science Park Road Suite
220, San Diego, California 92121, United States
| | - Yi Wang
- Wellspring Biosciences
Inc., 3033 Science Park Road Suite
220, San Diego, California 92121, United States
| | - Lian-Sheng Li
- Wellspring Biosciences
Inc., 3033 Science Park Road Suite
220, San Diego, California 92121, United States
| | - Wanping Mai
- Kura Oncology
Inc., 3033 Science Park Road Suite
220, San Diego, California 92121, United States
| | - Pingda Ren
- Kura Oncology
Inc., 3033 Science Park Road Suite
220, San Diego, California 92121, United States
| | - Xiaohu Deng
- Kura Oncology
Inc., 3033 Science Park Road Suite
220, San Diego, California 92121, United States
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Ren P, Yang XJ, Kim JS, Menon D, Pangeni D, Manu H, Tekeste A, Baidoo SK. Plasma acyl ghrelin and nonesterified fatty acids are the best predictors for hunger status in pregnant gilts. J Anim Sci 2018; 95:5485-5496. [PMID: 29293797 DOI: 10.2527/jas2017.1785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023] Open
Abstract
Sows are usually restricted fed during pregnancy to maximize their reproductive efficiency, which may predispose sows to a state of hunger. However, an objective measurement of hunger status has not been established. In the present study, we examined the correlation of plasma hormones and NEFA and selected the best predictors for hunger status using pregnant gilts. Three different levels of feed intake (0.5, 1.0 and 2.0 × maintenance energy intake [0.5M, 1.0M and 2.0M, respectively]) were imposed from Day 28 to 34 of gestation to create different hunger statuses in pregnant gilts. Plasma hormones related to energy homeostasis and NEFA were analyzed to quantify their response to different levels of feed intake. A total of 18 gilts (197.53 ± 6.41 kg) were allotted to 1 of 3 dietary treatments using a completely randomized design. Results showed that BW change, ADG, and G:F from Day 28 to 34 of gestation were higher ( < 0.01) for gilts on the 2.0M feeding level than for gilts on the 0.5M feeding level. Plasma acyl ghrelin concentrations showed a relatively flat pattern during the 24-h period. Plasma acyl ghrelin and NEFA concentrations and areas under the curve (AUC) were greater ( < 0.05) in gilts on the 0.5M level of feed intake than in those on the 2.0M level of feed intake. No differences were observed among the 3 feeding levels in terms of plasma glucagon-like peptide 1 and leptin concentrations. Additionally, consumption time for 1.82 kg feed on Day 35 of gestation was longer ( < 0.01) in gilts fed the 2.0M level of feed intake from Day 28 to 34 of gestation than in those on the 0.5M level of feed intake. Simple linear regression results showed that the AUC of acyl ghrelin was the best predictor for consumption time ( = 0.82), whereas the AUC of NEFA was the best predictor for BW ( = 0.55) or backfat change ( = 0.42) from Day 28 to 34 of gestation. In conclusion, our data suggested that a relative flat pattern existed in pregnant gilts in terms of the diurnal plasma profile of acyl ghrelin and that the level of feed intake of pregnant gilts was negatively correlated with plasma concentrations of acyl ghrelin and NEFA, which, in turn, were negatively associated with feed consumption time. The AUC of acyl ghrelin and NEFA seemed to be the best predictors for hunger status of pregnant gilts.
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Janes MR, Zhang J, Li LS, Hansen R, Peters U, Guo X, Chen Y, Babbar A, Firdaus SJ, Darjania L, Feng J, Chen JH, Li S, Li S, Long YO, Thach C, Liu Y, Zarieh A, Ely T, Kucharski JM, Kessler LV, Wu T, Yu K, Wang Y, Yao Y, Deng X, Zarrinkar PP, Brehmer D, Dhanak D, Lorenzi MV, Hu-Lowe D, Patricelli MP, Ren P, Liu Y. Targeting KRAS Mutant Cancers with a Covalent G12C-Specific Inhibitor. Cell 2018; 172:578-589.e17. [DOI: 10.1016/j.cell.2018.01.006] [Citation(s) in RCA: 615] [Impact Index Per Article: 102.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2017] [Revised: 10/09/2017] [Accepted: 01/04/2018] [Indexed: 12/25/2022]
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Sun Q, Chen Z, Han R, Nie Y, Zhang S, Luo F, Shi F, Tian G, Lin W, Ren P, Song L, Ruan X, Ren J. Experiment on uranium slabs of different thicknesses with D-T neutrons and validation of evaluated nuclear data. Fusion Engineering and Design 2017. [DOI: 10.1016/j.fusengdes.2017.10.021] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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32
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Cao Z, Li Z, Wang Y, Liu Y, Mo R, Ren P, Chen L, Lu J, Li H, Zhuang Y, Liu Y, Wang X, Zhao G, Tang W, Xiang X, Wang H, Cai W, Liu L, Zhu C, Bao S, Xie Q. Assessment of serum Golgi protein 73 as a biomarker for the diagnosis of significant fibrosis in patients with chronic HBV infection. J Viral Hepat 2017; 24 Suppl 1:57-65. [PMID: 29082644 DOI: 10.1111/jvh.12786] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 05/03/2017] [Accepted: 09/14/2017] [Indexed: 12/15/2022]
Abstract
Transient elastography (TE) is accurate in staging fibrosis noninvasively. However, a reliable serum biomarker with comparable accuracy is also important, especially when TE is unreliable/unavailable. Therefore, we aimed to evaluate the diagnostic performance of serum Golgi protein 73 (GP73) for significant fibrosis in patients with chronic HBV infection. A total of 801 patients with chronic liver disease (CLD; 492 chronic HBV infection and 309 non-HBV liver disease) with liver biopsy performance were enrolled. Healthy controls (n = 180) and hepatocellular carcinoma (HCC) patients (n = 85) were included for comparisons. Liver biopsy was used as the reference method for fibrosis staging. Serum GP73 level was measured in duplicate in double-blind fashion. Serum GP73 was highest in HCC but also significantly higher in chronic hepatitis B than in healthy controls. The elevation of serum GP73 in non-HCC patients was significantly associated with the presence of significant fibrosis independently of ALT level, liver stiffness (LS) value, inflammation grade and other confounding factors. The diagnostic performance of serum GP73 was accurate in antiviral-naïve HBV patients (area under the receiver operating curve [AUROC], 0.76 95% CI: 0.72-0.81) but not in patients with ongoing antiviral treatment (AUROC, 0.60). The utility of serum GP73 was also confirmed in non-HBV CLD (AUROC, 0.80 95% CI: 0.75-0.85). Serum GP73 was comparable to LS (AUROC, 0.78 95% CI: 0.73-0.82) and significantly better than AST to platelet ratio index (APRI) (AUROC, 0.67 95% CI: 0.62-0.72) and FIB-4 (AUROC, 0.68 95% CI: 0.63-0.73). In conclusion, serum GP73 is an accurate serum marker for significant fibrosis in chronic HBV infection, with higher accuracy than APRI and FIB-4. Serum GP73 is potentially a complementary tool for TE when evaluating the necessity of antiviral treatment, particularly in patients without definite antiviral indication.
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Affiliation(s)
- Z Cao
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - Z Li
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - Y Wang
- Department of Hepatology, The Affiliated Infectious Diseases Hospital of Soochow University, Suzhou, China
| | - Y Liu
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - R Mo
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - P Ren
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - L Chen
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - J Lu
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - H Li
- Department of Infectious Disease, The Third Hospital of Changzhou, Jiangsu, China
| | - Y Zhuang
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - Y Liu
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - X Wang
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - G Zhao
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - W Tang
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - X Xiang
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - H Wang
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - W Cai
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
| | - L Liu
- Department of Infectious Disease, The Third Hospital of Changzhou, Jiangsu, China
| | - C Zhu
- Department of Hepatology, The Affiliated Infectious Diseases Hospital of Soochow University, Suzhou, China
| | - S Bao
- Discipline of Pathology, School of Medical Sciences and Bosch Institute, University of Sydney, Sydney, NSW, Australia
| | - Q Xie
- Department of Infectious Diseases, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China
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Xiang L, Wu J, Lin S, Luo H, Wen Q, Yang B, Pang H, He L, Shang C, Ren P, Yang H. Preliminary Results of a Phase 1/2 Study of Computed Tomography-Guided Interstitial High-Dose-Rate Brachytherapy in Combination With Regional Positive Lymph Node Intensity-Modulated Radiation Therapy in Locally Advanced Peripheral Non–small Cell Lung Canc. Int J Radiat Oncol Biol Phys 2017. [DOI: 10.1016/j.ijrobp.2017.06.1805] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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McDermott K, Lin F, Ren P. A MEDIATIONAL MODEL OF STRESS IN HIPPOCAMPAL NETWORKS IN MILD COGNITIVE IMPAIRMENT. Innov Aging 2017. [DOI: 10.1093/geroni/igx004.1565] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- K. McDermott
- School of Nursing, University of Rochester, Rochester, New York
| | - F.V. Lin
- School of Nursing, University of Rochester, Rochester, New York
| | - P. Ren
- School of Nursing, University of Rochester, Rochester, New York
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Burrows F, Kessler L, Chen J, Gao X, Hansen R, Li S, Thach C, Darjania L, Yao Y, Wang Y, Zarieh A, Yu K, Wu T, Zhang J, Hu-Lowe D, Li L, Ren P, Liu Y. Abstract 5168: KO-947, a potent ERK inhibitor with robust preclinical single agent activity in MAPK pathway dysregulated tumors. Cancer Res 2017. [DOI: 10.1158/1538-7445.am2017-5168] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Abstract
The RAS/RAF/MEK pathway is a major driver of malignant progression, particularly in cancers arising from mutations in RAS, BRAF and NF1. Although both BRAF and MEK inhibitors have been approved for treatment of melanoma, their clinical activity is commonly limited by acquired resistance due to reactivation of the pathway downstream of their targets. Since the ERK1/2 kinases are the final node in the MAPK signaling pathway, they are not subject to the feedback reactivation mechanisms that can undermine RAF or MEK blockade, offering the possibility of clinical benefit in settings where earlier drugs are ineffective. Here we describe the characterization of KO-947, a potent and selective inhibitor of ERK1/2 kinases, in biochemical, cellular and in vivo antitumor activity assays. KO-947 was profiled in vitro in biochemical activity assays, competition binding assays, and a probe-based competition binding assay in cell lysates, and subsequently screened in a large panel of human tumor cell lines focused on MAPK-dysregulated tumor types. In vivo studies were carried out in well-characterized xenograft models of BRAF-, KRAS- and NRAS-mutant disease and subsequently extended to a large panel of early-passage patient-derived xenograft (PDX) models representative of a wide range of tumor types and molecular profiles. Biochemical assays reveal that KO-947 is a 10nM inhibitor of ERK with at least 50-fold selectivity against a panel of 450 kinases. KO-947 blocks ERK signaling and proliferation of tumor cells exhibiting dysregulation of MAPK pathway signaling, including mutations in BRAF, NRAS or KRAS, at low nanomolar concentrations. KO-947 is differentiated from other published ERK inhibitors by an extended residence time and high potency in cell engagement that translate into prolonged pathway inhibition in vitro and in vivo. In cell-line derived xenograft studies, the drug profoundly suppresses ERK signaling for up to five days after a single dose and induces regressions in RAS- and RAF-mutant melanoma, NSCLC and pancreatic cancer models on administration schedules ranging from daily to weekly. Intermittent dosing enables comparable antitumor activity at reduced dose-intensity. PDX screening confirms and extends these findings to include RAS and BRAF mutant colorectal, gastric and cervical carcinoma models, and robust activity is also seen on both weekly and Q2D schedules in tumor models lacking BRAF/RAS mutations but with other dysregulation of the MAPK pathway. Thus, the favorable ADME properties of KO-947 enable the achievement of optimal antitumor activity with intermittent dosing, which may provide an opportunity to maximize the therapeutic window with flexible administration routes and schedules. These results demonstrate the potential clinical utility of KO-947 in MAPK pathway dysregulated tumors.
Citation Format: Francis Burrows, Linda Kessler, Jeffrey Chen, Xin Gao, Rasmus Hansen, Shuangwei Li, Carol Thach, Levan Darjania, Yvonne Yao, Yi Wang, Ata Zarieh, Ke Yu, Tao Wu, Jingchuan Zhang, Dana Hu-Lowe, Liansheng Li, Pingda Ren, Yi Liu. KO-947, a potent ERK inhibitor with robust preclinical single agent activity in MAPK pathway dysregulated tumors [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2017; 2017 Apr 1-5; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2017;77(13 Suppl):Abstract nr 5168. doi:10.1158/1538-7445.AM2017-5168
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Affiliation(s)
| | | | | | - Xin Gao
- 2Wellspring Biosciences, La Jolla, CA
| | | | | | | | | | | | - Yi Wang
- 2Wellspring Biosciences, La Jolla, CA
| | | | - Ke Yu
- 2Wellspring Biosciences, La Jolla, CA
| | - Tao Wu
- 2Wellspring Biosciences, La Jolla, CA
| | | | | | | | | | - Yi Liu
- 1Kura Oncology, La Jolla, CA
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Ren P, A. J, F.V. L. ACUTE STRESS REACTIVITY LINKS TO QUALITY OF LIFE (QOL) IN AMNESTIC MILD COGNITIVE IMPAIRMENT (MCI). Innov Aging 2017. [DOI: 10.1093/geroni/igx004.1271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Affiliation(s)
- P. Ren
- University of Rochester Medical Center, Rochester, New York
| | - Jacobs A.
- University of Rochester Medical Center, Rochester, New York
| | - Lin F.V.
- University of Rochester Medical Center, Rochester, New York
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Lin F, Ren P, Mapstone M, Baran T. THE CINGULATE CORTEX OF OLDER ADULTS WITH EXCELLENT MEMORY CAPACITY. Innov Aging 2017. [DOI: 10.1093/geroni/igx004.014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Affiliation(s)
- F.V. Lin
- University of Rochester Medical Center, Rochester, New York,
| | - P. Ren
- University of Rochester Medical Center, Rochester, New York,
| | - M. Mapstone
- University of California-Irvine, Irvine, California
| | - T. Baran
- University of Rochester Medical Center, Rochester, New York,
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Wang X, Baran T, Ren P, Raizada R, Lin F. SUPERNORMALS’ OVER-TIME BRAIN MAP LINKS TO ALZHEIMER’S PATHOLOGY: A MULTIVARIATE PATTERN ANALYSIS. Innov Aging 2017. [DOI: 10.1093/geroni/igx004.1558] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- X. Wang
- University of Rochester, Rochester, New York
| | - T. Baran
- University of Rochester Medical Center, Rochester, New York,
| | - P. Ren
- University of Rochester Medical Center, Rochester, New York,
| | | | - F.V. Lin
- University of Rochester Medical Center, Rochester, New York,
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Yin XN, Yuan J, Ren P. [Microcystic stromal tumor of ovary during pregnancy: report of a case]. Zhonghua Bing Li Xue Za Zhi 2017; 46:203-204. [PMID: 28297766 DOI: 10.3760/cma.j.issn.0529-5807.2017.03.015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
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Tekeste A, Manu H, Ren P, Pangeni D, Tostenson B, Yang X, Baidoo SK. 223 Evaluation of nursery diet complexity on growth performance and carcass traits of pigs. J Anim Sci 2017. [DOI: 10.2527/asasmw.2017.12.223] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Ren P, Yang X, Cui S, Kim J, Menon D, Pangeni D, Manu H, Tekeste A, Baidoo SK. 164 Effects of different feeding levels during three short periods of gestation on gilt and litter performance, nutrient digestibility, and energy homeostasis. J Anim Sci 2017. [DOI: 10.2527/asasmw.2017.12.164] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Ren P, Yang XJ, Cui SQ, Kim JS, Menon D, Baidoo SK. Effects of different feeding levels during three short periods of gestation on gilt and litter performance, nutrient digestibility, and energy homeostasis in gilts. J Anim Sci 2017; 95:1232-1242. [PMID: 28380514 DOI: 10.2527/jas.2016.1208] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The present study investigated the effects of different feeding levels during 3 short periods of gestation on gilt and litter performance, apparent total tract digestibility (ATTD) of energy and nutrients, and energy homeostasis in gilts. A total of 18 gilts were allotted to 1 of 3 dietary treatments using a completely randomized design. All gilts were fed 1 common corn-soybean meal-based diet with the amount of 1.0 × maintenance energy intake (100 × BW (BW) kcal ME/d) throughout gestation except 3 periods of 7 d when dietary treatments were imposed on d 27, d 55, and d 83 of gestation. During the 3 short periods, gilts were fed 1 of 3 different feeding levels: 0.5, 1.0, and 2.0 × maintenance energy level (0.5M, 1.0M, and 2.0M, respectively). Results showed that gilts on 2.0M feeding level had higher ( < 0.05) weight gain from d 27 to 109 of gestation (37.05 vs. 15.34 kg) and greater ( < 0.05) BW change, average daily gain, and gain to feed ratio during gestation periods 1 (d 27-34) and 3 (d 83-90) when compared with gilts on 0.5M feeding level. No differences ( > 0.10) in litter performance were observed among the 3 feeding levels. Additionally, the slopes of BW change in response to feeding levels in period 1 were 4.32 kg/0.5M change from 0.5M to 1.0M feeding level and 3.72 kg/0.5M change from 1.0M to 2.0M feeding level, respectively. There were quadratic ( < 0.05) effects of feeding levels on ATTD of dry matter and gross energy during periods 1 and 2 (d 55-62). Furthermore, fasting plasma concentrations of acyl ghrelin and nonesterified fatty acid (NEFA) in period 1 were greater ( < 0.01) in gilts on 0.5M feeding level than those on 2.0M feeding level. In conclusion, increasing feeding levels during 3 short periods increased primiparous sow performance during these short periods but did not affect litter performance. ATTD of energy and nutrients, and BW change efficiency were maximized for gilts on 1.0 M feeding level. The data also indicated that sows on the lowest feeding level were exposed to negative energy balance as evidenced by the higher plasma acyl ghrelin and NEFA concentrations.
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Manu H, Ren P, Pangeni D, Tostenson B, Yang X, Tekeste A, Su Hyup L, Baidoo SK. 066 Effects of frequency and time of feeding during gestation on sow and litter performance. J Anim Sci 2017. [DOI: 10.2527/asasmw.2017.066] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Ren P, Yang X, Kim J, Menon D, Pangeni D, Manu H, Tekeste A, Baidoo SK. 322 Plasma acyl ghrelin and nonesterified fatty acids are the best indicators for hunger status in pregnant gilts. J Anim Sci 2017. [DOI: 10.2527/asasmw.2017.322] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Tostenson B, Tekeste A, Pangeni D, Manu H, Ren P, Yang X, Baidoo SK. 093 Influence of ethanol co-products and barley on growth performance and carcass characteristics of growing-finishing pigs in liquid or dry feeding systems. J Anim Sci 2017. [DOI: 10.2527/asasmw.2017.093] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Ren P, Li R, Yuan YZ, Lu XT, Niu Q. [Influence of occupational aluminum exposure on cognitive function and glutamate receptor protein expression in workers]. Zhonghua Lao Dong Wei Sheng Zhi Ye Bing Za Zhi 2017; 35:85-90. [PMID: 28355693 DOI: 10.3760/cma.j.issn.1001-9391.2017.02.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Objective: To investigate the influence of occupational aluminum exposure on cognitive function and glutamate receptor protein expression in peripheral blood lymphocytes in workers and the possibility of glutamate receptor being used as a biomarker for cognitive impairment in aluminum workers. Methods: From October to December, 2014, cluster sampling was performed to select 121 workers in aluminum electrolysis workshop as exposure group and 231 workers in thermoelectric workshop and logistics department as control group. Mini-Mental State Examination, clock drawing test, digit span test (DST) , verbal fluency test (VFT) , and Fuld Object-Memory (FOM) Evaluation were used to analyze cognitive function. Graphite furnace atomic absorption spectrophotometry was used to measure plasma aluminum level as an exposure indicator. Enzyme-linked immunosorbent assay was used to measure the content of glutamate receptor proteins in peripheral blood lymphocytes, including the subunits of N-methyl-D-aspartate receptor NR1, NR2A, and NR2B and metabotropic glutamate receptor 1 (mGluR1) . The correlation between cognitive function indices and the content of glutamate receptor proteins was analyzed. Results: There was no significant difference in plasma aluminum level between the control group and the exposure group (132.52±80.40 μg/L vs 182.88±72.32 μg/L, P>0.05) . According to the plasma aluminum level, the study subjects were divided into control group and low-, medium-, and high-level plasma aluminum groups, and there were significant differences in plasma aluminum level between these groups (all P<0.01) . The high-level plasma aluminum group had a significantly lower memory ability score than the control group and the low- and medium-level plasma aluminum groups (all P<0.05) . The high-level plasma aluminum group had lower DST and digital span forward (DSF) scores than the control group and the low-and medium-level plasma aluminum groups. The low-, medium-, and high-level plasma aluminum groups had lower digital span backward (DSB) scores than the control group. The medium-and high-level plasma aluminum groups had lower VFT scores than the control group and the low-level plasma aluminum group. The high-level plasma aluminum group had significantly lower expression of NR1 and NR2A proteins than the control group and the low-and medium-level plasma aluminum groups, and the medium- and high-level plasma aluminum groups had significantly higher expression of mGluR1 protein than the control group and the low-level plasma aluminum group (all P<0.05) . The expression of NR1 and NR2A proteins was negatively correlated with plasma aluminum level (r=-0.475 and -0.692, both P<0.05) , andthe expression of mGluR1 protein was positively correlated with plasma aluminum level (r=0.756, P<0.05) . The expression of NR1 protein was positively correlated with DSF, DSB, DST, and VFT scores (r(s)=0.213, 0.249, 0.271, and 0.228, all P<0.05) , and the expression of NR2A protein was positively correlated with VFT score (r(s)=0.206, P<0.05) . Conclusion: Occupational aluminum exposure may affect workers' memory function, and the expression of NR1 and NR2A in peripheral blood lymphocytes is correlated with cognitive function indices and can be used as biomarkers for cognitive impairment in aluminum workers.
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Affiliation(s)
- P Ren
- School of Public Health, Shanxi Medical University, Taiyuan 030001, China
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Ren P, Yang X, Kim J, Menon D, Baidoo S. Effect of different feeding levels during three short periods of gestation on sow and litter performance over two reproductive cycles. Anim Reprod Sci 2017; 177:42-55. [DOI: 10.1016/j.anireprosci.2016.12.005] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2016] [Revised: 12/07/2016] [Accepted: 12/11/2016] [Indexed: 10/20/2022]
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Jin J, Ran J, Yang C, Jiang X, Zhou Y, Feng Z, Wang Y, Lan D, Ren P, Liu Y. Molecular characterization, expression, and functional analysis of chicken TRAF6. Genet Mol Res 2017; 16:gmr-16-01-gmr.16019138. [DOI: 10.4238/gmr16019138] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Ren P, Yang XJ, Cui SQ, Kim JS, Menon D, Baidoo SK. Effects of different feeding levels during three short periods of gestation on gilt and litter performance, nutrient digestibility, and energy homeostasis in gilts. J Anim Sci 2017. [DOI: 10.2527/jas2016.1208] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Qiu HY, Ren P, Li R, Zhang QL, Lu XT, Niu Q. [Association between H3K4me3/BDNF and the cognitive function of workers occupationally exposed to aluminum]. Zhonghua Lao Dong Wei Sheng Zhi Ye Bing Za Zhi 2016; 34:900-904. [PMID: 28241677 DOI: 10.3760/cma.j.issn.1001-9391.2016.12.005] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Objective: To investigate the influence of occupational aluminum exposure on cognitive function and its relationship with tri-methyl histone H3 lysine residues 4 points (H3K4me3) and brain-derived neurotrophic factor (BDNF) levels. Methods: By cluster random sampling method, a total of 235 cases of male workers selected from a Shanxi aluminum factory were recruited in the study in September 2015. Used the occupational epidemiological investigation questionnaire, which included Mini-Mental State Examination (MMSE) , Clock Drawing Test (CDT) , Digit Span Test (DST, including forward test DSFT and backward test DSBT) , Fuild Object Memory Evaluation (FOME) and Verbal Fluency Test (VFT) , to collect workers' basic information and assess their cognitive function score. Detected the concentration of aluminum in plasma by graphite furnace atomic absorption spectrometry. Workers were divided into three groups by the 25 percentile and 75 percentile of the aluminum content, such as low, middle and high aluminum concentration groups. The concentrations of H3K4me3 in lymphocyte and BDNF in plasma were determined by enzyme-linked immunosorbent assay. Results: The levels of aluminum in plasma was 134.36 (100.14, 178.96) μg/L. The scores of MMSE, DSFT, DSBT, DST of high aluminum concentration group were lower than low aluminum group (27.98±1.25 vs 28.83±1.54, 9.19±2.00 vs 10.64±2.87, 6.08±1.63 vs 7.19±3.07, 15.27±3.11 vs 17.81±4.72, all P<0.05) , the scores of CDT, FOME, VFT among three groups had no statistical significance (all P>0.05) . The expression levels of H3K4me3 and BDNF of high aluminum concentration group were lower than the low group [ (18.45±9.81) ng/μg Pro vs (23.76±9.89) ng/μg Pro, (26.07±10.18) ng/ml vs (31.66±9.24) ng/ml, all P<0.05]. Multiple correlation analysis showed that aluminum concentration were negatively correlated toH3K4me3, BDNF, MMSE, DSFT, DST, respectively (r(s)=-0.307、-0.214、-0.252、-0.197, -0.181, all P<0.01) . Conclusion: Exposure to occupational aluminum for a long time may change cognitive function, which go along with the decreasing of H3K4me3 level in lymphocyte and BDNF protein expression in plasma.
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Affiliation(s)
- H Y Qiu
- Department of Occupational and Environmental Health, Shanxi Medical University, Taiyuan 030001, China
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