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Shetty N, Sathe P, Aishwarya, Francis M, Shetty R. Comparison of intraocular lens power prediction accuracy of formulas in American Society of Cataract and Refractive Surgery post-refractive surgery calculator in eyes with prior radial keratotomy. Indian J Ophthalmol 2023; 71:3224-3228. [PMID: 37602612 PMCID: PMC10565947 DOI: 10.4103/ijo.ijo_3417_22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 07/02/2023] [Accepted: 07/03/2023] [Indexed: 08/22/2023] Open
Abstract
Purpose To evaluate the accuracy of intraocular lens (IOL) power prediction of the formulas available on the American Society of Cataract and Refractive Surgery (ASCRS) post-refractive calculator in eyes with prior radial keratotomy (RK) for myopia. Methods This retrospective study included 25 eyes of 18 patients whose status was post-RK for treatment of myopia, which had undergone cataract extraction with IOL implantation. Prediction error was calculated as the difference between implanted IOL power and predicted power by various formulae available on ASCRS post-refractive calculator. The formulas compared were Humphrey Atlas method, IOLMaster/Lenstar method, Barrett True-K no-history formula, ASCRS Average power, and ASCRS Maximum power on ASCRS post-refractive calculator. Results Median absolute errors were the least for Barrett True-K and ASCRS Maximum power, that is, 0.56 (0.25, 1.04) and 0.56 (0.25, 1.06) D, respectively, and that of Atlas method was 1.60 (0.85, 2.28) D. Median arithmetic errors were positive for Atlas, Barrett True-K, ASCRS Average (0.86 [-0.17, 1.61], 0.14 [-0.22 to 0.54], and 0.23 [-0.054, 0.76] D, respectively) and negative for IOLMaster/Lenstar method and ASCRS Maximum power (-0.02 [-0.46 to 0.38] and - 0.48 [-1.06 to - 0.22] D, respectively). Multiple comparison analysis of Friedman's test revealed that Atlas formula was significantly different from IOLMaster/Lenstar, Barrett True-K, and ASCRS Maximum power; ASCRS Maximum power was significantly different from all others (P < 0.00001). Conclusion In post-RK eyes, Barrett True-K no-history formula and ASCRS Maximum power given by the ASCRS calculator were more accurate than other available formulas, with ASCRS Maximum leading to more myopic outcomes when compared to others.
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Affiliation(s)
- Naren Shetty
- Department of Cataract and Refractive Lens Services, Narayana Nethralaya, Bengaluru, Karnataka, India
| | - Priyanka Sathe
- Department of Cataract and Refractive Lens Services, Narayana Nethralaya, Bengaluru, Karnataka, India
| | - Aishwarya
- Department of Cataract and Refractive Lens Services, Narayana Nethralaya, Bengaluru, Karnataka, India
| | - Mathew Francis
- Imaging, Biomechanics and Mathematical Modelling Solutions, Narayana Nethralaya Foundation, Bengaluru, Karnataka, India
| | - Rohit Shetty
- Department of Cornea and Refractive Surgery, Narayana Nethralaya, Bengaluru, Karnataka, India
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Khamar P, Shetty R, Annavajjhala S, Narasimhan R, Kumari S, Sathe P, Roy AS. Impact of crossplay between ocular aberrations and depth of focus in topo-guided laser-assisted in situ keratomileusis outcomes. Indian J Ophthalmol 2023; 71:467-475. [PMID: 36727342 DOI: 10.4103/ijo.ijo_191_22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
Purpose To develop a nomogram in cases with mismatch between subjective and Topolyzer cylinder, and based on the magnitude of the mismatch, customize a treatment plan to attain good visual outcomes post-laser-assisted in situ keratomileusis (LASIK) surgery. Methods The patients were evaluated preoperatively using corneal tomography with Pentacam. Five optimal corneal topography scans were obtained from the Topolyzer Vario were used for planning the LASIK treatment. For the nomogram purpose, the patients were divided into three categories based on the difference between the subjective cylinder and Topolyzer (corneal) cylinder. The first group (group 1) consisted of eyes of patients, where the difference was less than or equal to 0.4 D. The second group (group 2) consisted of eyes, where the difference was more than 0.4 D and the subjective cylinder was lesser than the Topolyzer cylinder. The third group (group 3) included eyes where the difference was more than 0.4 D but the subjective cylinder was greater than the Topolyzer cylinder. LASIK was performed with the WaveLight FS 200 femtosecond laser and WaveLight EX500 excimer laser. Assessment of astigmatism correction for the three groups was done using Aplins vector analysis. For comparison of proportions, Chi-square test was used. A P value less than 0.05 was considered statistically significant. Results The UDVA was statistically significantly different when compared between groups 1 and 2 (P = 0.02). However, the corrected distance visual acuity (CDVA) was similar among all the three groups (P = 0.1). Group 3 showed an increase of residual cylinder by -0.25 D, which was significant at intermediate and near reading distances (P < 0.05). Group 3 showed significantly higher target-induced astigmatism (TIA) compared to groups 1 and 2 (P = 0.01). The mean surgically induced astigmatism (SIA) was the least in group 2, which was statistically significant (P < 0.01). Conclusion The outcomes for distance vision using our nomogram postoperatively were excellent, but further refinement for improving the near vision outcomes is required.
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Affiliation(s)
- Pooja Khamar
- Department of Cataract and Refractive Surgery, Narayana Nethralaya, Bengaluru, Karnataka, India
| | - Rohit Shetty
- Department of Cornea and Refractive Surgery, Narayana Nethralaya, Bengaluru, Karnataka, India
| | - Sriram Annavajjhala
- Department of Cornea and Refractive Surgery, Narayana Nethralaya, Bengaluru, Karnataka, India
| | - Raghav Narasimhan
- IBMS LAB, Narayana Nethralaya Foundation, Bengaluru, Karnataka, India
| | - Savitri Kumari
- Department of Cataract and Refractive Surgery, Narayana Nethralaya, Bengaluru, Karnataka, India
| | - Priyanka Sathe
- Department of Cornea and Refractive Surgery, Narayana Nethralaya, Bengaluru, Karnataka, India
| | - Abhijit Sinha Roy
- IBMS LAB, Narayana Nethralaya Foundation, Bengaluru, Karnataka, India
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Mondkar SA, Tullu MS, Sathe P, Agrawal M. Lane-Hamilton syndrome - Is it really a needle in a haystack? J Postgrad Med 2022; 68:162-167. [PMID: 34708697 PMCID: PMC9733521 DOI: 10.4103/jpgm.jpgm_1163_20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2020] [Revised: 01/29/2021] [Accepted: 06/02/2021] [Indexed: 11/04/2022] Open
Abstract
Introduction The association of pulmonary hemosiderosis with celiac disease (Lane-Hamilton syndrome) is extremely rare. Case Details A five-year-old female child presented with fever, cough, breathlessness, and pallor for 20 days, without any previous history of recurrent lower respiratory tract infections, tuberculosis, or cardiac disease. There was no history of pica, chronic diarrhea, bleeding, or personal or family history of repeated blood transfusions. She had tachycardia, tachypnea, severe pallor, stunting, rickets, and bilateral fine lung crepitations. Peripheral smear and blood indices revealed dimorphic anemia. Anti-tissue transglutaminase IgA antibody levels were high (>200 U/mL) and the upper gastrointestinal endoscopy with duodenal biopsy confirmed the diagnosis of celiac disease. The child was discharged on a gluten-free diet (GFD) and oral hematinic, but her dietary compliance was poor. Interestingly, the child had persistent bilateral pulmonary infiltrates, which was initially attributed to congestive cardiac failure (CCF), which persisted even despite treatment. HRCT chest revealed interstitial thickening and bilateral alveolar shadows and bronchoalveolar lavage showed a few inflammatory cells. The child was readmitted four times with similar complaints and was given packed red cell transfusions. In the fourth admission, a lung biopsy was done, which revealed extensive pulmonary hemosiderosis. The patient was given a course of oral steroids for 6 weeks, with a gluten-free diet, following which both the anemia and the pulmonary infiltrates resolved. Conclusion Pulmonary hemosiderosis is an important cause of anemia in cases of celiac disease and may be misdiagnosed as CCF due to severe anemia. A strict GFD, with or without corticosteroids, can reverse the clinical and radiological picture.
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Affiliation(s)
- SA Mondkar
- Department of Pediatrics, Seth G.S. Medical College and KEM Hospital, Parel, Mumbai, Maharashtra, India
| | - MS Tullu
- Department of Pediatrics, Seth G.S. Medical College and KEM Hospital, Parel, Mumbai, Maharashtra, India
| | - P Sathe
- Department of Pathology, Seth G.S. Medical College and KEM Hospital, Parel, Mumbai, Maharashtra, India
| | - M Agrawal
- Department of Pediatrics, Seth G.S. Medical College and KEM Hospital, Parel, Mumbai, Maharashtra, India
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Webster R, Sekuloski S, Odedra A, Woolley S, Jennings H, Amante F, Trenholme KR, Healer J, Cowman AF, Eriksson EM, Sathe P, Penington J, Blanch AJ, Dixon MWA, Tilley L, Duffy MF, Craig A, Storm J, Chan JA, Evans K, Papenfuss AT, Schofield L, Griffin P, Barber BE, Andrew D, Boyle MJ, de Labastida Rivera F, Engwerda C, McCarthy JS. Safety, infectivity and immunogenicity of a genetically attenuated blood-stage malaria vaccine. BMC Med 2021; 19:293. [PMID: 34802442 PMCID: PMC8606250 DOI: 10.1186/s12916-021-02150-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/06/2021] [Accepted: 09/30/2021] [Indexed: 01/24/2023] Open
Abstract
BACKGROUND There is a clear need for novel approaches to malaria vaccine development. We aimed to develop a genetically attenuated blood-stage vaccine and test its safety, infectivity, and immunogenicity in healthy volunteers. Our approach was to target the gene encoding the knob-associated histidine-rich protein (KAHRP), which is responsible for the assembly of knob structures at the infected erythrocyte surface. Knobs are required for correct display of the polymorphic adhesion ligand P. falciparum erythrocyte membrane protein 1 (PfEMP1), a key virulence determinant encoded by a repertoire of var genes. METHODS The gene encoding KAHRP was deleted from P. falciparum 3D7 and a master cell bank was produced in accordance with Good Manufacturing Practice. Eight malaria naïve males were intravenously inoculated (day 0) with 1800 (2 subjects), 1.8 × 105 (2 subjects), or 3 × 106 viable parasites (4 subjects). Parasitemia was measured using qPCR; immunogenicity was determined using standard assays. Parasites were rescued into culture for in vitro analyses (genome sequencing, cytoadhesion assays, scanning electron microscopy, var gene expression). RESULTS None of the subjects who were administered with 1800 or 1.8 × 105 parasites developed parasitemia; 3/4 subjects administered 3× 106 parasites developed significant parasitemia, first detected on days 13, 18, and 22. One of these three subjects developed symptoms of malaria simultaneously with influenza B (day 17; 14,022 parasites/mL); one subject developed mild symptoms on day 28 (19,956 parasites/mL); and one subject remained asymptomatic up to day 35 (5046 parasites/mL). Parasitemia rapidly cleared with artemether/lumefantrine. Parasitemia induced a parasite-specific antibody and cell-mediated immune response. Parasites cultured ex vivo exhibited genotypic and phenotypic properties similar to inoculated parasites, although the var gene expression profile changed during growth in vivo. CONCLUSIONS This study represents the first clinical investigation of a genetically attenuated blood-stage human malaria vaccine. A P. falciparum 3D7 kahrp- strain was tested in vivo and found to be immunogenic but can lead to patent parasitemia at high doses. TRIAL REGISTRATION Australian New Zealand Clinical Trials Registry (number: ACTRN12617000824369 ; date: 06 June 2017).
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Affiliation(s)
- Rebecca Webster
- QIMR Berghofer Medical Research Institute, Brisbane, Australia
| | - Silvana Sekuloski
- QIMR Berghofer Medical Research Institute, Brisbane, Australia.,Current address: PharmOut, 111 Eagle Street, Brisbane, Queensland, 4000, Australia
| | - Anand Odedra
- QIMR Berghofer Medical Research Institute, Brisbane, Australia.,Liverpool School of Tropical Medicine, Liverpool, UK
| | - Stephen Woolley
- QIMR Berghofer Medical Research Institute, Brisbane, Australia.,Liverpool School of Tropical Medicine, Liverpool, UK.,Centre of Defence Pathology, Royal Centre for Defence Medicine, Joint Hospital Group, Birmingham, UK
| | - Helen Jennings
- QIMR Berghofer Medical Research Institute, Brisbane, Australia
| | - Fiona Amante
- QIMR Berghofer Medical Research Institute, Brisbane, Australia
| | - Katharine R Trenholme
- QIMR Berghofer Medical Research Institute, Brisbane, Australia.,The University of Queensland, Brisbane, Australia
| | - Julie Healer
- The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
| | - Alan F Cowman
- The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.,Department of Microbiology and Immunology, University of Melbourne, Melbourne, Australia
| | - Emily M Eriksson
- The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.,Department of Medical Biology, University of Melbourne, Melbourne, Australia
| | - Priyanka Sathe
- Current address: Medicines Development for Global Health Limited, 18 Kavanagh Street, Southbank, Victoria, 3006, Australia
| | - Jocelyn Penington
- The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia
| | - Adam J Blanch
- Bio21 Molecular Science and Biotechnology Institute, Melbourne, Australia.,Department of Biochemistry and Molecular Biology, University of Melbourne, Melbourne, Australia
| | - Matthew W A Dixon
- Bio21 Molecular Science and Biotechnology Institute, Melbourne, Australia.,Department of Biochemistry and Molecular Biology, University of Melbourne, Melbourne, Australia
| | - Leann Tilley
- Bio21 Molecular Science and Biotechnology Institute, Melbourne, Australia.,Department of Biochemistry and Molecular Biology, University of Melbourne, Melbourne, Australia
| | - Michael F Duffy
- Department of Microbiology and Immunology, University of Melbourne, Melbourne, Australia.,Bio21 Molecular Science and Biotechnology Institute, Melbourne, Australia.,The Peter Doherty Institute for Infection and Immunity, Melbourne, Australia.,Department of Medicine, Royal Melbourne Hospital, Melbourne, Australia
| | - Alister Craig
- Liverpool School of Tropical Medicine, Liverpool, UK
| | - Janet Storm
- Liverpool School of Tropical Medicine, Liverpool, UK
| | | | - Krystal Evans
- The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.,Current address: GSK, 436 Johnston Street, Abbotsford, Victoria, 3067, Australia
| | - Anthony T Papenfuss
- The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.,Department of Medical Biology, University of Melbourne, Melbourne, Australia
| | - Louis Schofield
- The Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia.,Australian Institute of Tropical Health and Medicine, James Cook University, Cairns, Australia
| | - Paul Griffin
- QIMR Berghofer Medical Research Institute, Brisbane, Australia.,The University of Queensland, Brisbane, Australia.,Department of Medicine and Infectious Diseases, Mater Hospital and Mater Research, Brisbane, Australia
| | | | - Dean Andrew
- QIMR Berghofer Medical Research Institute, Brisbane, Australia
| | | | | | | | - James S McCarthy
- QIMR Berghofer Medical Research Institute, Brisbane, Australia. .,The Peter Doherty Institute for Infection and Immunity, Melbourne, Australia.
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Affiliation(s)
- P Sathe
- Department of Pathology, Seth G.S. Medical college and KEM Hospital, Mumbai, Maharashtra, India
| | - M Agnihotri
- Department of Pathology, Seth G.S. Medical college and KEM Hospital, Mumbai, Maharashtra, India
| | - C Vinchu
- Department of Pathology, Seth G.S. Medical college and KEM Hospital, Mumbai, Maharashtra, India
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Laxman K, Sathe P, Al Abri M, Dobretsov S, Dutta J. Disinfection of Bacteria in Water by Capacitive Deionization. Front Chem 2020; 8:774. [PMID: 33110910 PMCID: PMC7489198 DOI: 10.3389/fchem.2020.00774] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Accepted: 07/24/2020] [Indexed: 11/27/2022] Open
Abstract
Clean water is one of the primary UN sustainable development goals for 2,030 and sustainable water deionization and disinfection is the backbone of that goal. Capacitive deionization (CDI) is an upcoming technique for water deionization and has shown substantial promise for large scale commercialization. In this study, activated carbon cloth (ACC) electrode based CDI devices are used to study the removal of ionic contaminants in water and the effect of ion concentrations on the electrosorption and disinfection functions of the CDI device for mixed microbial communities in groundwater and a model bacterial strain Escherichia coli. Up to 75 % of microbial cells could be removed in a single pass through the CDI unit for both synthetic and groundwater, while maintaining the salt removal activity. Mortality of the microbial cells were also observed during the CDI cell regeneration and correlated with the chloride ion concentrations. The power consumption and salt removal capacity in the presence and absence of salt were mapped and shown to be as low as 0.1 kWh m−3 and 9.5 mg g−1, respectively. The results indicate that CDI could be a viable option for single step deionization and microbial disinfection of brackish water.
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Affiliation(s)
- Karthik Laxman
- Functional Materials Group, Department of Applied Physics, School of Engineering Sciences (SCI), KTH Royal Institute of Technology, Stockholm, Sweden
| | - Priyanka Sathe
- Nanotechnology Research Centre, Sultan Qaboos University, Muscat, Oman.,Department of Marine Science and Fisheries, College of Agricultural and Marine Sciences, Sultan Qaboos University, Muscat, Oman
| | - Mohammed Al Abri
- Nanotechnology Research Centre, Sultan Qaboos University, Muscat, Oman.,Department of Petroleum and Chemical Engineering, College of Engineering, Sultan Qaboos University, Muscat, Oman
| | - Sergey Dobretsov
- Department of Marine Science and Fisheries, College of Agricultural and Marine Sciences, Sultan Qaboos University, Muscat, Oman.,Center of Excellence in Marine Biotechnology, Sultan Qaboos University, Muscat, Oman
| | - Joydeep Dutta
- Functional Materials Group, Department of Applied Physics, School of Engineering Sciences (SCI), KTH Royal Institute of Technology, Stockholm, Sweden
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7
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Dobretsov S, Sathe P, Bora T, Barry M, Myint MTZ, Abri MA. Toxicity of Different Zinc Oxide Nanomaterials at 3 Trophic Levels: Implications for Development of Low-Toxicity Antifouling Agents. Environ Toxicol Chem 2020; 39:1343-1354. [PMID: 32274816 DOI: 10.1002/etc.4720] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Revised: 11/27/2019] [Accepted: 03/30/2020] [Indexed: 06/11/2023]
Abstract
Because zinc oxide (ZnO) nanomaterials are used in antifouling and antibacterial solutions, understanding their toxic effects on different aquatic organisms is essential. In the present study, we evaluated the toxicity of ZnO nanoparticles of 10 to 30 nm (ZnONPI) and 80 to 200 nm (ZnONPII), ZnO nanorods (width 80 nm, height 1.7 µm) attached to the support substrate (glass, ZnONRG) and not attached (ZnONRS), as well as Zn2+ ions at concentrations ranging from 0.5 to 100 mg/L. Toxicity was evaluated using the microalga Dunaliella salina, the brine shrimp Artemia salina, and the marine bacterium Bacillus cereus. The highest toxicity was observed for ZnONPs (median lethal concentration [LC50] ~15 mg/L) and Zn2+ ions (LC50 ~13 mg/L), whereas the lowest toxicity found for ZnO nanorods (ZnONRG LC50 ~60 mg/L; ZnONRS LC50 ~42 mg/L). The presence of the support substrate in case of ZnO nanorods reduced the associated toxicity to aquatic organisms. Smaller ZnONPs resulted in the highest Zn2+ ion dissolution among tested nanostructures. Different aquatic organisms responded differently to ZnO nanomaterials, with D. salina and B. cereus being more sensitive than A. salina. Toxicity of nanostructures increased with an increase of the dose and the time of exposure. Supported ZnO nanorods can be used as a low-toxicity alternative for future antimicrobial and antifouling applications. Environ Toxicol Chem 2020;39:1343-1354. © 2020 SETAC.
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Affiliation(s)
- Sergey Dobretsov
- Department of Marine Science & Fisheries, College of Agricultural & Marine Sciences, Sultan Qaboos University, Muscat, Sultanate of Oman
- Center of Excellence in Marine Biotechnology, Sultan Qaboos University, Muscat, Sultanate of Oman
| | - Priyanka Sathe
- Department of Marine Science & Fisheries, College of Agricultural & Marine Sciences, Sultan Qaboos University, Muscat, Sultanate of Oman
- Center of Nanotechnology, Sultan Qaboos University, Muscat, Sultanate of Oman
| | - Tanujjal Bora
- Nanotechnology Industrial System Engineering, School of Engineering and Technology, Asian Institute of Technology, Klong Luang, Pathumthani, Thailand
| | - Michael Barry
- Department of Biology, College of Science, Sultan Qaboos University, Muscat, Sultanate of Oman
| | - Myo Tay Zar Myint
- Department of Physics, College of Science, Sultan Qaboos University, Muscat, Sultanate of Oman
| | - Mohammed Al Abri
- Center of Nanotechnology, Sultan Qaboos University, Muscat, Sultanate of Oman
- Petroleum and Chemical Engineering Department, College of Engineering, Sultan Qaboos University, Muscat, Sultanate of Oman
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8
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Riyami SA, Mahrouqi DA, Abed RMM, Elshafie A, Sathe P, Barry MJ. Direct and indirect effects of zinc oxide and titanium dioxide nanoparticles on the decomposition of leaf litter in streams. Ecotoxicology 2019; 28:435-448. [PMID: 30929110 DOI: 10.1007/s10646-019-02036-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 03/13/2019] [Indexed: 06/09/2023]
Abstract
As the production of metallic nanoparticles has grown, it is important to assess their impacts on structural and functional components of ecosystems. We investigated the effects of zinc and titanium nanoparticles on leaf decomposition in freshwater habitats. We hypothesized that nanoparticles would inhibit the growth and activity of microbial communities leading to decreased decomposition rates. We also hypothesized that under natural light, the nanoparticles would produce reactive oxygen species that could potentially accelerate decomposition. In the lab, whole Ficus vasta leaves were placed in containers holding one liter of stream water and exposed to either 0, 1, 10 or 100 mg/L of ZnO or TiO2 nanoparticles for six weeks (referred to as Exp. 1). We measured leaf mass loss, microbial metabolism, and bacterial density at 2, 4, and 6 weeks. In a second experiment (referred to as Exp. 2), we measured the effects of light and 10 and 100 mg/L ZnO or TiO2 nanoparticles on leaf mass loss, bacterial density and the bacterial and fungal community diversity over a 2 week period. In Experiment 1, mass loss was significantly reduced at 10 and 100 mg/L after 6 weeks and bacterial density decreased at 100 mg/L. In Experiment 2, there was no effect of ZnO nanoparticles on leaf mass loss, but TiO2 nanoparticles significantly reduced mass loss in the dark but not in the light. One possible explanation is that release of reactive oxygen species by the TiO2 nanoparticles in the light may have increased the rate of leaf decomposition. Bacterial and fungal diversity was highest in the dark, but nanoparticles did not reduce overall diversity.
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Affiliation(s)
| | | | - Raeid M M Abed
- Biology Department, Sultan Qaboos University, Muscat, Oman
| | | | - Priyanka Sathe
- Department of Marine Biology and Fisheries, Sultan Qaboos University, Muscat, Oman
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9
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Dobretsov S, Abed RMM, Muthukrishnan T, Sathe P, Al-Naamani L, Queste BY, Piontkovski S. Living on the edge: biofilms developing in oscillating environmental conditions. Biofouling 2018; 34:1064-1077. [PMID: 30621450 DOI: 10.1080/08927014.2018.1539707] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2018] [Revised: 10/15/2018] [Accepted: 10/16/2018] [Indexed: 06/09/2023]
Abstract
For the first time, the densities and diversity of microorganisms developed on ocean gliders were investigated using flow cytometry and Illumina MiSeq sequencing of 16S and 18S rRNA genes. Ocean gliders are autonomous buoyancy-driven underwater vehicles, equipped with sensors continuously recording physical, chemical, and biological parameters. Microbial biofilms were investigated on unprotected parts of the glider and surfaces coated with base, biocidal and chitosan paints. Biofilms on the glider were exposed to periodical oscillations of salinity, oxygen, temperature, pressure, depth and light, due to periodic ascending and descending of the vehicle. Among the unprotected surfaces, the highest microbial abundance was observed on the bottom of the glider's body, while the lowest density was recorded on the glider's nose. Antifouling paints had the lowest densities of microorganisms. Multidimensional analysis showed that the microbial communities formed on unprotected parts of the glider were significantly different from those on biocidal paint and in seawater.
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Affiliation(s)
- Sergey Dobretsov
- a Marine Science and Fisheries Department, College of Agricultural and Marine Sciences , Sultan Qaboos University , Muscat , Oman
- b Centre of Excellence in Marine Biotechnology , Sultan Qaboos University , Muscat , Oman
| | - Raeid M M Abed
- c Department of Biology, College of Science , Sultan Qaboos University , Muscat , Oman
| | - Thirumahal Muthukrishnan
- a Marine Science and Fisheries Department, College of Agricultural and Marine Sciences , Sultan Qaboos University , Muscat , Oman
- c Department of Biology, College of Science , Sultan Qaboos University , Muscat , Oman
| | - Priyanka Sathe
- a Marine Science and Fisheries Department, College of Agricultural and Marine Sciences , Sultan Qaboos University , Muscat , Oman
| | - Laila Al-Naamani
- a Marine Science and Fisheries Department, College of Agricultural and Marine Sciences , Sultan Qaboos University , Muscat , Oman
| | - Bastien Y Queste
- d Centre for Ocean and Atmospheric Sciences , University of East Anglia , Norwich , UK
| | - Sergey Piontkovski
- a Marine Science and Fisheries Department, College of Agricultural and Marine Sciences , Sultan Qaboos University , Muscat , Oman
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10
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Sathe P, Pang SHM, Delconte R, Elwood N, Huntington ND. Identification of Novel Human NK Cell Progenitor Subsets. Int J Mol Sci 2017; 18:ijms18122716. [PMID: 29244714 PMCID: PMC5751317 DOI: 10.3390/ijms18122716] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2017] [Revised: 12/08/2017] [Accepted: 12/08/2017] [Indexed: 11/16/2022] Open
Abstract
Understanding the pathways and regulation of human haematopoiesis, in particular, lymphopoiesis, is vital to manipulation of these processes for therapeutic purposes. However, although haematopoiesis has been extensively characterised in mice, translation of these findings to human biology remains rudimentary. Here, we describe the isolation of three progenitor subsets from human foetal bone marrow that represent differential stages of commitment to the natural killer (NK) cell lineage based on IL-15 responsiveness. We identify CD7 as a marker of IL-15 responsive progenitors in human bone marrow and find that this expression is maintained throughout commitment and maturation. Within the CD7+ fraction, we focussed on the lineage potential of three subsets based on CD127 and CD117 expression and observed restricted lymphoid and biased NK cell potential amongst subsets. We further demonstrate the presence of subsets similar in both phenotype and function in umbilical cord blood and the bone marrow of humanised mice, validating these as appropriate sources of progenitors for the investigation of human haematopoiesis. Overall, we describe several stages in the process of lymphopoiesis that will form the basis of investigating the regulators of this process in humans.
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Affiliation(s)
- Priyanka Sathe
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia.
- Department of Medical Biology, University of Melbourne, Parkville, VIC 3050, Australia.
| | - Swee Heng Milon Pang
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia.
- Department of Medical Biology, University of Melbourne, Parkville, VIC 3050, Australia.
| | - Rebecca Delconte
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia.
- Department of Medical Biology, University of Melbourne, Parkville, VIC 3050, Australia.
| | - Ngaire Elwood
- Cord Blood Research, Murdoch Children's Research Institute, Melbourne, VIC 3052, Australia.
- Department of Paediatrics, University of Melbourne, Melbourne, VIC 3010, Australia.
| | - Nicholas D Huntington
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia.
- Department of Medical Biology, University of Melbourne, Parkville, VIC 3050, Australia.
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Al-Hinai MH, Sathe P, Al-Abri MZ, Dobretsov S, Al-Hinai AT, Dutta J. Antimicrobial Activity Enhancement of Poly(ether sulfone) Membranes by in Situ Growth of ZnO Nanorods. ACS Omega 2017; 2:3157-3167. [PMID: 30023686 PMCID: PMC6044565 DOI: 10.1021/acsomega.7b00314] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2017] [Accepted: 06/19/2017] [Indexed: 05/24/2023]
Abstract
Composite poly(ether sulfone) membranes integrated with ZnO nanostructures either directly blended or grown in situ have enhanced antibacterial activity with improved functionality in reducing the biofouling in water treatment applications. The pore structure and surface properties of the composite were studied to investigate the effect of the addition of ZnO nanostructures. The hydrophilicity of the blended membranes increased with a higher content of ZnO nanoparticles in the membrane (2-6%), which could be further controlled by varying the growth conditions of ZnO nanorods on the polymer surface. Improved water flux, bovine serum albumin rejection, and inhibition of Escherichia coli bacterial growth under visible light irradiation was observed for the membranes decorated with ZnO nanorods compared to those in the membranes simply blended with ZnO nanoparticles. No regrowth of E. coli was recorded even 2 days after the incubation.
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Affiliation(s)
- Muna H. Al-Hinai
- Department
of Petroleum and Chemical Engineering, Sultan
Qaboos University, P.O. Box 33, Al-Khoud, Muscat 123, Sultanate
of Oman
- The
Research Council Chair in Nanotechnology for Water Desalination, Sultan Qaboos University, P.O. Box 17, Al-Khoud, Muscat 123, Sultanate of Oman
| | - Priyanka Sathe
- The
Research Council Chair in Nanotechnology for Water Desalination, Sultan Qaboos University, P.O. Box 17, Al-Khoud, Muscat 123, Sultanate of Oman
- Department
of Marine Science and Fisheries, Sultan
Qaboos University, P.O. Box 34, Al-Khoud, Muscat 123, Sultanate
of Oman
| | - Mohammed Z. Al-Abri
- Department
of Petroleum and Chemical Engineering, Sultan
Qaboos University, P.O. Box 33, Al-Khoud, Muscat 123, Sultanate
of Oman
- The
Research Council Chair in Nanotechnology for Water Desalination, Sultan Qaboos University, P.O. Box 17, Al-Khoud, Muscat 123, Sultanate of Oman
| | - Sergey Dobretsov
- Department
of Marine Science and Fisheries, Sultan
Qaboos University, P.O. Box 34, Al-Khoud, Muscat 123, Sultanate
of Oman
- Center
of Excellence in Marine Biotechnology, Sultan
Qaboos University, P.O. Box 50, Al-Khoud, Muscat 123, Sultanate
of Oman
| | - Ashraf T. Al-Hinai
- Materials
and Corrosion Department, Petroleum Development
of Oman, P.O. Box 81, Muscat 100, Sultanate of Oman
| | - Joydeep Dutta
- Functional
Materials, Materials and Nanophysics-Applied Physics Department, SCI
School, KTH Royal Institute of Technology, Isafjordsgatan 22, Kista, SE-164 40 Stockholm, Sweden
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Sathe P, Laxman K, Myint MTZ, Dobretsov S, Richter J, Dutta J. Bioinspired nanocoatings for biofouling prevention by photocatalytic redox reactions. Sci Rep 2017; 7:3624. [PMID: 28620218 PMCID: PMC5472575 DOI: 10.1038/s41598-017-03636-6] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2017] [Accepted: 05/02/2017] [Indexed: 12/13/2022] Open
Abstract
Aquaculture is a billion dollar industry and biofouling of aquaculture installations has heavy economic penalties. The natural antifouling (AF) defence mechanism of some seaweed that inhibits biofouling by production of reactive oxygen species (ROS) inspired us to mimic this process by fabricating ZnO photocatalytic nanocoating. AF activity of fishing nets modified with ZnO nanocoating was compared with uncoated nets (control) and nets painted with copper-based AF paint. One month experiment in tropical waters showed that nanocoatings reduce abundances of microfouling organisms by 3-fold compared to the control and had higher antifouling performance over AF paint. Metagenomic analysis of prokaryotic and eukaryotic fouling organisms using next generation sequencing platform proved that nanocoatings compared to AF paint were not selectively enriching communities with the resistant and pathogenic species. The proposed bio-inspired nanocoating is an important contribution towards environmentally friendly AF technologies for aquaculture.
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Affiliation(s)
- Priyanka Sathe
- Department of Marine Science & Fisheries, College of Agricultural & Marine Sciences, Sultan Qaboos University, P.O. Box 34, Al Khoud, 123, Sultanate of Oman
- Chair in Nanotechnology, Water Research Center, Sultan Qaboos University, P.O. Box 17, Al Khoud, 123, Sultanate of Oman
| | - Karthik Laxman
- Functional Materials Division, Department of Applied Physics, School of Engineering Sciences, KTH Royal Institute of Technology, Isafjordsgatan 22, SE-164 40, Kista Stockholm, Sweden
| | - Myo Tay Zar Myint
- Department of Physics, College of Science, Sultan Qaboos University, PO Box 36, Al Khoudh, Muscat, 123, Sultanate of Oman
| | - Sergey Dobretsov
- Department of Marine Science & Fisheries, College of Agricultural & Marine Sciences, Sultan Qaboos University, P.O. Box 34, Al Khoud, 123, Sultanate of Oman.
- Center of Excellence in Marine Biotechnology, Sultan Qaboos University, P.O. Box, 50 Al Khoud, 123, Sultanate of Oman.
| | - Jutta Richter
- Institute for Chemistry and Biology of the Marine Environment (ICBM), University of Oldenburg, Ammerländer Heerstraße 114, 26129, Oldenburg, Germany
| | - Joydeep Dutta
- Functional Materials Division, Department of Applied Physics, School of Engineering Sciences, KTH Royal Institute of Technology, Isafjordsgatan 22, SE-164 40, Kista Stockholm, Sweden.
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13
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Bora T, Sathe P, Laxman K, Dobretsov S, Dutta J. Defect engineered visible light active ZnO nanorods for photocatalytic treatment of water. Catal Today 2017. [DOI: 10.1016/j.cattod.2016.09.014] [Citation(s) in RCA: 65] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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14
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Delconte RB, Shi W, Sathe P, Ushiki T, Seillet C, Minnich M, Kolesnik TB, Rankin LC, Mielke LA, Zhang JG, Busslinger M, Smyth MJ, Hutchinson DS, Nutt SL, Nicholson SE, Alexander WS, Corcoran LM, Vivier E, Belz GT, Carotta S, Huntington ND. The Helix-Loop-Helix Protein ID2 Governs NK Cell Fate by Tuning Their Sensitivity to Interleukin-15. Immunity 2016; 44:103-115. [PMID: 26795246 DOI: 10.1016/j.immuni.2015.12.007] [Citation(s) in RCA: 91] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2015] [Revised: 07/28/2015] [Accepted: 09/30/2015] [Indexed: 12/21/2022]
Abstract
The inhibitor of DNA binding 2 (Id2) is essential for natural killer (NK) cell development with its canonical role being to antagonize E-protein function and alternate lineage fate. Here we have identified a key role for Id2 in regulating interleukin-15 (IL-15) receptor signaling and homeostasis of NK cells by repressing multiple E-protein target genes including Socs3. Id2 deletion in mature NK cells was incompatible with their homeostasis due to impaired IL-15 receptor signaling and metabolic function and this could be rescued by strong IL-15 receptor stimulation or genetic ablation of Socs3. During NK cell maturation, we observed an inverse correlation between E-protein target genes and Id2. These results shift the current paradigm on the role of ID2, indicating that it is required not only to antagonize E-proteins during NK cell commitment, but constantly required to titrate E-protein activity to regulate NK cell fitness and responsiveness to IL-15.
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Affiliation(s)
- Rebecca B Delconte
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Wei Shi
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia; Department of Computing and Information Systems, The University of Melbourne, VIC 3010, Australia
| | - Priyanka Sathe
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Takashi Ushiki
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Cyril Seillet
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Martina Minnich
- Research Institute of Molecular Pathology, Dr. Bohr-Gasse 7, 1030 Vienna, Austria
| | - Tatiana B Kolesnik
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Lucille C Rankin
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Lisa A Mielke
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Jian-Guo Zhang
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Meinrad Busslinger
- Research Institute of Molecular Pathology, Dr. Bohr-Gasse 7, 1030 Vienna, Austria
| | - Mark J Smyth
- QIMR Berghofer Medical Research Institute, Herston, QLD 4006, Australia; School of Medicine, University of Queensland, Herston, QLD 4006, Australia
| | - Dana S Hutchinson
- Drug Discovery Biology, Monash Institute of Pharmacological Science, Parkville, VIC 3052, Australia
| | - Stephen L Nutt
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Sandra E Nicholson
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Warren S Alexander
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Lynn M Corcoran
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia; Department of Medical Biology, University of Melbourne, VIC 3010 Australia
| | - Eric Vivier
- Centre d'Immunologie de Marseille-Luminy, Aix Marseille Université UM2, Inserm, U1104, CNRS UMR7280, 13288 Marseille, France; Immunologie, Hôpital de la Comception, Assistance Publique des Hôpitaux de Marseille, 13385 Marseille, France
| | - Gabrielle T Belz
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia.
| | - Sebastian Carotta
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia
| | - Nicholas D Huntington
- The Walter and Eliza Hall Institute of Medical Research, 1G Royal Parade, Parkville, VIC 3052, Australia.
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Sathe P, Richter J, Myint MTZ, Dobretsov S, Dutta J. Self-decontaminating photocatalytic zinc oxide nanorod coatings for prevention of marine microfouling: a mesocosm study. Biofouling 2016; 32:383-95. [PMID: 26930216 DOI: 10.1080/08927014.2016.1146256] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
The antifouling (AF) properties of zinc oxide (ZnO) nanorod coated glass substrata were investigated in an out-door mesocosm experiment under natural sunlight (14:10 light: dark photoperiod) over a period of five days. The total bacterial density (a six-fold reduction) and viability (a three-fold reduction) was significantly reduced by nanocoatings in the presence of sunlight. In the absence of sunlight, coated and control substrata were colonized equally by bacteria. MiSeq Illumina sequencing of 16S rRNA genes revealed distinct bacterial communities on the nanocoated and control substrata in the presence and absence of light. Diatom communities also varied on nanocoated substrata in the presence and the absence of light. The observed AF activity of the ZnO nanocoatings is attributed to the formation of reactive oxygen species (ROS) through photocatalysis in the presence of sunlight. These nanocoatings are a significant step towards the production of an environmentally friendly AF coating that utilizes a sustainable supply of sunlight.
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Affiliation(s)
- Priyanka Sathe
- a Department of Marine Science & Fisheries, College of Agricultural & Marine Sciences , Sultan Qaboos University , Muscat , Sultanate of Oman
- b Chair in Nanotechnology, Water Research Center , Sultan Qaboos University , Muscat , Sultanate of Oman
| | - Jutta Richter
- a Department of Marine Science & Fisheries, College of Agricultural & Marine Sciences , Sultan Qaboos University , Muscat , Sultanate of Oman
- c Hochschule Bremerhaven , Bremerhaven , Germany
| | - Myo Tay Zar Myint
- b Chair in Nanotechnology, Water Research Center , Sultan Qaboos University , Muscat , Sultanate of Oman
- d Department of Physics, College of Science , Sultan Qaboos University , Muscat , Sultanate of Oman
| | - Sergey Dobretsov
- a Department of Marine Science & Fisheries, College of Agricultural & Marine Sciences , Sultan Qaboos University , Muscat , Sultanate of Oman
| | - Joydeep Dutta
- b Chair in Nanotechnology, Water Research Center , Sultan Qaboos University , Muscat , Sultanate of Oman
- e Functional Materials Division, Materials and Nano-Physics Department , ICT School, KTH Royal Institute of Technology , Kista Stockholm , Sweden
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16
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Sathe P, Sakhavalkar P, Kumar S, Choudhary S. Clinical experience of using a novel extracorporeal cytokine adsorption column for treatment of septic shock with multiorgan failure. Crit Care 2015. [PMCID: PMC4470641 DOI: 10.1186/cc14210] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
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17
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Sathe P, Delconte RB, Souza-Fonseca-Guimaraes F, Seillet C, Chopin M, Vandenberg CJ, Rankin LC, Mielke LA, Vikstrom I, Kolesnik TB, Nicholson SE, Vivier E, Smyth MJ, Nutt SL, Glaser SP, Strasser A, Belz GT, Carotta S, Huntington ND. Innate immunodeficiency following genetic ablation of Mcl1 in natural killer cells. Nat Commun 2014; 5:4539. [DOI: 10.1038/ncomms5539] [Citation(s) in RCA: 129] [Impact Index Per Article: 12.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2014] [Accepted: 06/27/2014] [Indexed: 02/06/2023] Open
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18
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Witkowski M, Hu Y, Sathe P, McKenzie M, Cimmino L, Liu G, Keniry A, Smyth GK, Huntington N, Dickins R. Probing IKAROS functions in B-ALL using novel mouse models. Exp Hematol 2014. [DOI: 10.1016/j.exphem.2014.07.252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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19
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Affiliation(s)
- Ken Shortman
- The Walter and Eliza Hall Institute, IG Royal Parade, Parkville, Victoria 3052, Australia.
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20
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Merad M, Sathe P, Helft J, Miller J, Mortha A. The dendritic cell lineage: ontogeny and function of dendritic cells and their subsets in the steady state and the inflamed setting. Annu Rev Immunol 2013; 31:563-604. [PMID: 23516985 DOI: 10.1146/annurev-immunol-020711-074950] [Citation(s) in RCA: 1615] [Impact Index Per Article: 146.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Dendritic cells (DCs) form a remarkable cellular network that shapes adaptive immune responses according to peripheral cues. After four decades of research, we now know that DCs arise from a hematopoietic lineage distinct from other leukocytes, establishing the DC system as a unique hematopoietic branch. Recent work has also established that tissue DCs consist of developmentally and functionally distinct subsets that differentially regulate T lymphocyte function. This review discusses major advances in our understanding of the regulation of DC lineage commitment, differentiation, diversification, and function in situ.
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Affiliation(s)
- Miriam Merad
- Department of Oncological Sciences, Mount Sinai Medical School, New York, NY 10029, USA.
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Merad M, Sathe P, Helft J, Miller J, Mortha A. The dendritic cell lineage: ontogeny and function of dendritic cells and their subsets in the steady state and the inflamed setting. Annu Rev Immunol 2013. [PMID: 23516985 DOI: 10.1146/annurev-immunol-020711-74950] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/12/2023]
Abstract
Dendritic cells (DCs) form a remarkable cellular network that shapes adaptive immune responses according to peripheral cues. After four decades of research, we now know that DCs arise from a hematopoietic lineage distinct from other leukocytes, establishing the DC system as a unique hematopoietic branch. Recent work has also established that tissue DCs consist of developmentally and functionally distinct subsets that differentially regulate T lymphocyte function. This review discusses major advances in our understanding of the regulation of DC lineage commitment, differentiation, diversification, and function in situ.
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Affiliation(s)
- Miriam Merad
- Department of Oncological Sciences, Mount Sinai Medical School, New York, NY 10029, USA.
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Gorakshakar A, Sathe P, Colah R, Nadkarni A, Ghosh K. Hemoglobin Showa-Yakushiji: a common β thalassemia mutation among the Agri community from western India. Genet Test Mol Biomarkers 2012; 16:302-5. [PMID: 22283879 DOI: 10.1089/gtmb.2011.0158] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
INTRODUCTION β thalassemia is one of the commonest inherited hemoglobin disorders. The prevalence of β thalassemia varies between 3% and 17% in various caste groups found in India. Hemoglobin Hb Showa Yakushiji results from a single nucleotide change at codon 110(CTG→CCG) in β globin gene. From earlier investigations, it was observed that Hb Showa Yakushiji was present in four Agri families who were referred for prenatal diagnosis. There are no reports on the prevalence of β thalassemia mutations from the Agri community. AIMS To find out the prevalence of β Thalassemia and Hb Showa Yakushiji among the Agri community. RESULT AND CONCLUSION Testing was conducted in the Agri dominated area around Navi Mumbai. Seven hundred ninety-five blood samples from unrelated Agri individuals were collected. Carrier detection for β thalassemia was done by using standard hematological procedures followed by characterization of mutations. The prevalence of β thalassemia among Agris was found to be 3.64%. Prevalence of Hb Showa Yakushiji among β thalassemia carriers was 24.13%. Among Agris we reported only four β thalassemia mutations. This study has helped us in establishing an algorithm for identifying β thalassemia mutations among Agris that is cost effective and will be useful for offering prenatal diagnosis.
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Affiliation(s)
- Ajit Gorakshakar
- Department of Haematogenetics, National Institute of Immunohaematology (ICMR), Parel, Mumbai, India.
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Sathe P, Wu L. The network of cytokines, receptors and transcription factors governing the development of dendritic cell subsets. Protein Cell 2011; 2:620-30. [PMID: 21904978 DOI: 10.1007/s13238-011-1088-0] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2011] [Accepted: 08/14/2011] [Indexed: 12/12/2022] Open
Abstract
The pathways leading to the development of different dendritic cell (DC) subsets have long been unclear. In recent years, a number of precursors on the route to DC development, both under steady state and inflammatory conditions, have been described, and the nature of these pathways is becoming clearer. In addition, the development of various knockout mouse models and an in vitro system modelling DC development have revealed the role of numerous cytokines and transcription factors that influence DC development. Here, we review recent findings on the factors important in DC development in the context of the developmental pathways that have been described.
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Affiliation(s)
- Priyanka Sathe
- Walter and Eliza Hall Institute, 1G Royal Parade, Parkville, Victoria 3050, Australia.
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Sathe P, Pooley J, Vremec D, Mintern J, Jin JO, Wu L, Kwak JY, Villadangos JA, Shortman K. The acquisition of antigen cross-presentation function by newly formed dendritic cells. J Immunol 2011; 186:5184-92. [PMID: 21422244 DOI: 10.4049/jimmunol.1002683] [Citation(s) in RCA: 91] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
The development of Ag-presenting functions by murine dendritic cells (DCs) of the CD8(+) DC lineage was studied using a Flt-3 ligand stimulated bone-marrow culture system. Although newly formed DCs of this lineage are capable of Ag uptake and efficient presentation to T cells on MHC class II, they initially lack the ability to cross-present exogenous Ags on MHC class I. Cross-presentation capacity is acquired as a subsequent maturation step, promoted by cytokines such as GM-CSF. The development of cross-presentation capacity by the DCs in these cultures may be monitored by the parallel development of DC surface expression of CD103. However, the expression of CD103 and cross-presentation capacity are not always linked; therefore, CD103 is not an essential part of the cross-presentation machinery. These results explain the considerable variability in CD103 expression by CD8(+) DCs as well as the findings that not all DCs of this lineage are capable of cross-presentation.
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Affiliation(s)
- Priyanka Sathe
- Walter and Eliza Hall Institute, Parkville, Victoria 3052, Australia
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Lahoud MH, Proietto AI, Ahmet F, Kitsoulis S, Eidsmo L, Wu L, Sathe P, Pietersz S, Chang HW, Walker ID, Maraskovsky E, Braley H, Lew AM, Wright MD, Heath WR, Shortman K, Caminschi I. The C-Type Lectin Clec12A Present on Mouse and Human Dendritic Cells Can Serve as a Target for Antigen Delivery and Enhancement of Antibody Responses. J Immunol 2009; 182:7587-94. [DOI: 10.4049/jimmunol.0900464] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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Abstract
Dendritic cells (DCs) are a heterogenous population of cells that can be grouped into the conventional DCs (cDCs) and plasmacytoid DCs (pDCs), or interferon-producing cells. pDCs are thought to develop in the bone marrow and migrate to the periphery as mature cells. In contrast, cDC precursors are thought to migrate to the periphery, where they further differentiate into cDCs. In the case of migratory cDCs, these precursors are thought to be monocytes, whereas resident cDCs derive from a different precursor. Recent activity on this subject has shed some light on the precursors that differentiate into resident cDCs and pDCs, but often with conflicting findings. Here, we review some of these findings and discuss some of the outstanding issues in the field.
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Affiliation(s)
- P Sathe
- The Walter and Eliza Hall Institute of Medical Research, Melbourne, Victoria, Australia.
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28
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Naik SH, Sathe P, Park HY, Metcalf D, Proietto AI, Dakic A, Carotta S, O'Keeffe M, Bahlo M, Papenfuss A, Kwak JY, Wu L, Shortman K. Development of plasmacytoid and conventional dendritic cell subtypes from single precursor cells derived in vitro and in vivo. Nat Immunol 2007; 8:1217-26. [PMID: 17922015 DOI: 10.1038/ni1522] [Citation(s) in RCA: 606] [Impact Index Per Article: 35.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2007] [Accepted: 09/18/2007] [Indexed: 02/08/2023]
Abstract
The development of functionally specialized subtypes of dendritic cells (DCs) can be modeled through the culture of bone marrow with the ligand for the cytokine receptor Flt3. Such cultures produce DCs resembling spleen plasmacytoid DCs (pDCs), CD8(+) conventional DCs (cDCs) and CD8(-) cDCs. Here we isolated two sequential DC-committed precursor cells from such cultures: dividing 'pro-DCs', which gave rise to transitional 'pre-DCs' en route to differentiating into the three distinct DC subtypes (pDCs, CD8(+) cDCs and CD8(-) cDCs). We also isolated an in vivo equivalent of the DC-committed pro-DC precursor cell, which also gave rise to the three DC subtypes. Clonal analysis of the progeny of individual pro-DC precursors demonstrated that some pro-DC precursors gave rise to all three DC subtypes, some produced cDCs but not pDCs, and some were fully committed to a single DC subtype. Thus, commitment to particular DC subtypes begins mainly at this pro-DC stage.
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Affiliation(s)
- Shalin H Naik
- The Walter and Eliza Hall Institute, Parkville, Victoria 3050, Australia.
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Sathe P, Venitz J, Lesko L. Evaluation of truncated areas in the assessment of bioequivalence of immediate release formulations of drugs with long half-lives and of Cmax with different dissolution rates. Pharm Res 1999; 16:939-43. [PMID: 10397617 DOI: 10.1023/a:1018898624643] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
PURPOSE To Evaluate truncated AUC in place of AUCt or extrapolated AUCinf, for drugs with long half-lives and to study the relationship between Cmax and in vitro dissolution rates. METHODS Monte-Carlo simulations were conducted using actual mean plasma concentrations of five long half-life drug products. The simulations were based on a catenary pharmacokinetic system in which the drug disposition in the body was represented by a one-or two-compartment model, characterizing the observed mean profiles. The influence of dramatic changes in the in vitro dissolution rate constant 'kd', was simulated in scenarios consisting of 20 crossover trials with 24 subjects per trial, comparing a fast dissolving reference and a hypothetical, slow dissolving test formulation. RESULTS The AUC's truncated after the completion of distribution phase were found surrogate to the AUCt or AUCinf measures. Except for Phenylbutazone, the Cmax measure was insensitive to the changes in the in vitro dissolution rate. The Cmax measure was found to be useful in the bioequivalence assessment since it reflected both the rate and extent of absorption. (Cmax/AUCt) measure was specific to absorption rate. CONCLUSIONS For the bioequivalence determination of long half-life drug products, (1) the use of truncated AUC's after completion of the distribution phase instead of AUCinf, appears feasible. (2) Cmax measure may be insensitive to input rate changes, if the absorption rate is not constrained by the input rate in relation to the distribution or elimination rate. (3) (Cmax/AUCt) may be more specific to 'ka' differences, but Cmax reflects differences in both rate and extent of absorption.
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Affiliation(s)
- P Sathe
- Office of Pharmaceutical Science, CDER, USFDA, Rockville, Maryland 20852, USA
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Abstract
PURPOSE To describe the properties of the similarity factor (f2) as a measure for assessing the similarity of two dissolution profiles. Discuss the statistical properties of the estimate based on sample means. METHODS The f2 metrics and the decision rule is evaluated using examples of dissolution profiles. The confidence interval is calculated using bootstrapping method. The bias of the estimate using sample mean dissolution is evaluated. RESULTS 1. f2 values were found to be sensitive to number of sample points, after the dissolution plateau has been reached. 2. The statistical evaluation of f2 could be made using 90% confidence interval approach. 3. The statistical distribution of f2 metrics could be simulated using 'Bootstrap' method. A relatively robust distribution could be obtained after more than 500 'Bootstraps'. 4. A statistical 'bias correction' was found to reduce the bias. CONCLUSIONS The similarity factor f2 is a simple measure for the comparison of two dissolution profiles. But the commonly used similarity factor estimate f2 is a biased and conservative estimate of f2. The bootstrap approach is a useful tool to simulate the confidence interval.
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Affiliation(s)
- V P Shah
- Office of Pharmaceutical Science, Center for Drug Evaluation and Research, Food and Drug Administration, Rockville, Maryland 20852, USA.
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31
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Abstract
Dissolution data for the immediate or modified release drug products are usually collected as percent dissolved at multiple time points. Once an in-vitro/in-vivo relationship is established on a drug product, the dissolution profile becomes meaningful and important. In that context, if a firm desires to modify its formulation on which the in-vitro/in-vivo association has been established, a meaningful insight into the pharmacokinetics may be obtained by comparing the dissolution profiles of the two lots. In this presentation, we demonstrated a model dependent dissolution profile comparison approach using example of carbamazepine tablet dissolution data. Once a mathematical function was selected to describe the dissolution data coming from various standard lots, a similarity region could be constructed using the model parameter variances. To compare the test and reference lot dissolution profiles, a statistical distance was calculated between the mean parameters. A confidence region generated around the normalized mean statistical distance could then be compared with the similarity region to assess the similarity or dissimilarity of the dissolution profiles.
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Affiliation(s)
- P Sathe
- Office of Pharmaceutical Sciences, U.S. Food and Drug Administration, Rockville, Maryland 20855, USA
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32
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Abstract
The cardiovascular effects elicited by volatilized cocaine were compared to those produced by i.v. drug administration. All of the subjects exposed to volatilized cocaine exhibited an initial increase in mean arterial pressure (MAP), profound bradycardia, and heart blocks. Intravenous administration of cocaine (1.5 mg/kg i.v.), a dose equivalent to the amount of drug subjects received from inhalation exposure, led to a transient increase in MAP but failed to produce any obvious ECG abnormalities or bradycardia; however, increasing the dose to 4.5 mg/kg resulted in considerable toxicity. Finally, the hemodynamic effects elicited by inhalation cocaine were found to undergo rapid tolerance during the first 5-min exposure period and the three subsequent drug exposures.
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Affiliation(s)
- A H Lichtman
- Department of Pharmacology and Toxicology, Medical College of Virginia/Virginia Commonwealth University, Richmond 23298, USA
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Abraham J, Cherian G, Sathe P, Bachhawat BK, Chandy J. Muscular dystrophy. Neurol India 1967; 15:152-63. [PMID: 5600514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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Sathe P, Abraham J, Chandy J. Histo-pathology of muscular dystrophy. Indian J Pathol Bacteriol 1966; 9:32-45. [PMID: 5905092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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