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Khan J, An H, Alam S, Kalsoom S, Huan Chen S, Ayano Begeno T, Du Z. Smart colorimetric indicator films prepared from chitosan and polyvinyl alcohol with high mechanical strength and hydrophobic properties for monitoring shrimp freshness. Food Chem 2024; 445:138784. [PMID: 38387319 DOI: 10.1016/j.foodchem.2024.138784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Revised: 02/15/2024] [Accepted: 02/15/2024] [Indexed: 02/24/2024]
Abstract
This work aimed to develop and characterize a colorimetric indicator films based on chitosan (CS), polyvinyl alcohol (PVA), and shikonin (SKN) from radix Lithospermi by casting method. The prepared films can serve as smart packaging for monitoring shrimp freshness which having excellent antimicrobial and antioxidant activity. The shikonin containing films have better hydrophobicity, barrier properties, and tensile strength. The release kinetics analysis shows that the loading amount causes a prolonged release of SKN from the prepared films. Increasing SKN in the CS/PVA film from 1 wt% to 2 wt% improved antibacterial effect for 24 h. Additionally, pH-sensitive color shifts from reddish (pH 2) to purple-bluish (pH 13) were visually seen in shikonin based solutions as well as films. The CS/PVA/SKN film detected shrimp deterioration at three temperatures (25, -20, and 4 °C) through color change. This study introduces a favorable approach for smart packaging in the food industry using multifunctional films.
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Affiliation(s)
- Jehangir Khan
- College of Chemistry, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Haoyue An
- College of Chemistry, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Shah Alam
- Department of Entomology, PMAS-Arid Agriculture University, Rawalpindi, Pakistan
| | - Saima Kalsoom
- Department of Chemistry, PMAS-Arid Agriculture University, Rawalpindi, Pakistan
| | - Shu Huan Chen
- College of Chemistry, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Teshale Ayano Begeno
- College of Chemistry, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Zhenxia Du
- College of Chemistry, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China.
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Nandi J, Sikdar AK, Kumar A, Alam S, Das P, Ray A. Temporal evolution of electron cloud in a cylindrical Penning trap at room temperature. Rev Sci Instrum 2024; 95:043202. [PMID: 38651988 DOI: 10.1063/5.0194917] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Accepted: 04/05/2024] [Indexed: 04/25/2024]
Abstract
The temporal evolution of the electron cloud at room temperature has been recorded through a resonance circuit by observing the axial oscillation frequency of its center of mass. The electron cloud undergoes radial expansion by interacting with the residual gas molecules, and it is finally lost upon hitting the Penning trap electrodes. It has been confirmed through detailed experimental investigations that the unique temporal pattern of frequency variation is a consequence of the cloud's radial expansion. Consequently, this approach offers a non-destructive means for single-shot detection, enabling continuous monitoring of the electron cloud's radial expansion during the confinement time. This technique offers a significant advantage over its destructive alternatives.
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Affiliation(s)
- J Nandi
- Variable Energy Cyclotron Centre, 1/AF Bidhannagar, Kolkata 700064, India
- Homi Bhabha National Institute, 2nd Floor, BARC Training School Complex, Anushaktinagar, Mumbai, Maharashtra 400094, India
| | - A K Sikdar
- Variable Energy Cyclotron Centre, 1/AF Bidhannagar, Kolkata 700064, India
- Homi Bhabha National Institute, 2nd Floor, BARC Training School Complex, Anushaktinagar, Mumbai, Maharashtra 400094, India
| | - A Kumar
- Indian Institute of Technology, Kharagpur, West Bengal 721302, India
| | - S Alam
- Indian Institute of Technology, Kharagpur, West Bengal 721302, India
| | - P Das
- Variable Energy Cyclotron Centre, 1/AF Bidhannagar, Kolkata 700064, India
- Homi Bhabha National Institute, 2nd Floor, BARC Training School Complex, Anushaktinagar, Mumbai, Maharashtra 400094, India
| | - A Ray
- Variable Energy Cyclotron Centre, 1/AF Bidhannagar, Kolkata 700064, India
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Khan J, Alam S, Begeno TA, Du Z. Anti-bacterial films developed by incorporating shikonin extracted from radix lithospermi and nano-ZnO into chitosan/polyvinyl alcohol for visual monitoring of shrimp freshness. Int J Biol Macromol 2024; 260:129542. [PMID: 38244741 DOI: 10.1016/j.ijbiomac.2024.129542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 01/11/2024] [Accepted: 01/14/2024] [Indexed: 01/22/2024]
Abstract
In recent years, the utilization of smart colorimetric packaging films for monitoring food freshness has garnered significant concentration. However, their limited tensile strength, hydrophobicity, antioxidant, and antibacterial properties have been substantial barriers to widespread adoption. In this study, we harnessed the potential of biodegradable materials, specifically chitosan/polyvinyl alcohol, alongside shikonin extracted from Radix Lithospermi and ZnO nanoparticles, to create a novel colorimetric sensing film. This film boasts an impressive tensile strength of 82.36 ± 2.13 MPa, enhanced hydrophobic characteristics (exemplified by a final contact angle of 99.81°), and outstanding antioxidant and antibacterial properties. It is designed for real-time monitoring of shrimp freshness. Additionally, we verified the effectiveness of this sensing film in detecting shrimp freshness across varying temperature conditions, namely 25 °C and 4 °C was validated through the measurement of total volatile basic nitrogen (TVB-N). Visual inspection unequivocally revealed a transition in color from dark red to purple-light blue and finally to dark bluish providing a clear indication of shrimp spoilage, which demonstrated a strong correlation with the TVB-N content in shrimp measured through standard laboratory procedures. The colorimetric sensing film developed in this study holds great promise for creating smart labels with exceptional antioxidant and antibacterial properties, tailored for visual freshness monitoring of shrimp.
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Affiliation(s)
- Jehangir Khan
- College of Chemistry, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Shah Alam
- Department of Entomology, PMAS-Arid Agriculture University, Rawalpindi, Pakistan
| | - Teshale Ayano Begeno
- College of Chemistry, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China
| | - Zhenxia Du
- College of Chemistry, Beijing University of Chemical Technology, Beijing 100029, People's Republic of China.
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Krishna SP, Hoque MR, Nessa A, Saha BK, Faysal MR, Alam S. Status of Serum Calcium in Patients with Chronic Obstructive Pulmonary Disease. Mymensingh Med J 2024; 33:45-48. [PMID: 38163772] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2024]
Abstract
Chronic obstructive pulmonary disease (COPD) remains a major public health problem with relatively high prevalence rates worldwide (5-13%). COPD is a major cause of morbidity and mortality worldwide and results in an economic and social burden that is both substantial and increasing. The purpose of the study was to explore the alteration of serum calcium in patients with COPD. This cross-sectional study was carried out in the Department of Biochemistry, Mymensingh Medical College, Bangladesh from January 2021 to December 2021. Data was collected from Medicine Department of Mymensingh Medical College Hospital, Mymensingh. A total number of 120 subjects participated in this study. Out of them, 60 apparently normal healthy individuals were selected as Group I and another 60 diagnosed COPD patients were selected as Group II. Serum calcium was measured by colorimetric method using the test kit. The results were calculated and analyzed by using statistical package for social science (SPSS), windows package version 21.0. Data were expressed in mean ±SD and statistical significance was done by Student's unpaired 't' test. In this study, the mean ±SD values of serum calcium were 9.21±1.06mg/dl and 8.26±0.95mg/dl in Group I and Group II respectively. The results were highly significant (p<0.001). The result suggested that there was significant relation between COPD and alteration of serum calcium. So, by this study we recommended that routine evaluation of serum calcium is important for prevention of exacerbations, reduction of morbidity and mortality in patients with COPD.
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Affiliation(s)
- S P Krishna
- Dr Swati Paul Krishna, M. Phil (Biochemistry), Assistant Professor of Biochemistry, TMSS Medical College, Bogura, Bangladesh; E-mail:
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Hossain A, Sun X, Shahrier M, Islam S, Alam S. Exploring nighttime pedestrian crash patterns at intersection and segments: Findings from the machine learning algorithm. J Safety Res 2023; 87:382-394. [PMID: 38081711 DOI: 10.1016/j.jsr.2023.08.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 04/19/2023] [Accepted: 08/11/2023] [Indexed: 12/18/2023]
Abstract
INTRODUCTION Pedestrian safety at nighttime is an ongoing critical traffic safety concern. Although poor visibility is primarily associated with nighttime pedestrian crashes, other contributing factors such as humans, vehicles, roadways, and environmental factors interact with each other to cause a crash. Additionally, the pattern of nighttime pedestrian crashes differs significantly according to the intersection and segment location, which requires further exploration. DATA This study applied Association Rules Mining (ARM), a rule-based machine learning method, to reveal the association of nighttime pedestrian crash risk factors according to the intersection and segment locations using 2,505 nighttime pedestrian fatal and injury crashes in Louisiana (2015-2019). RESULTS AND CONCLUSIONS Based on the generated rules, the results show that nighttime pedestrian crashes at the intersection are associated with right-turn vehicle movement, older drivers (>64 years) at the high-speed intersection, senior pedestrians (>64 years) in rainy weather conditions, violation by pedestrian age group '<15 years', and alcohol-intoxicated pedestrian violation in business/industrial areas. Additionally, 'careless operation' at the intersection is associated with alcohol-involved drivers. Most of the nighttime pedestrian crashes at segments are associated with roadways with no physical separation and the absence of streetlights. Driver alcohol involvement and their physical condition (inattentive/distracted) are also associated with pedestrian crashes associated at the segment location at night. Other segment pedestrian crashes are linked to the interstate in dark conditions, open country locations, and high-speed roadways. Additionally, the crash site investigation identified several critical pedestrian safety concerns including the lack of crosswalk facilities, high driveway density, and pedestrian behavioral patterns (e.g., crossing at roadway segments close to the intersection location). PRACTICAL APPLICATIONS The findings of this study can be used for selecting the appropriate countermeasures based on a case-by-case basis. The exposure patterns can be used in educational campaigns to strategically reduce nighttime pedestrian crashes.
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Affiliation(s)
- Ahmed Hossain
- Department of Civil Engineering, University of Louisiana at Lafayette, Lafayette, LA, 70504, United States.
| | - Xiaoduan Sun
- Department of Civil Engineering, University of Louisiana at Lafayette, Lafayette, LA, 70504, United States.
| | - Mahir Shahrier
- Department of Civil Engineering, Rajshahi University of Engineering & Technology, Rajshahi 6204, Bangladesh
| | - Shahrin Islam
- Department of Civil Engineering, Bangladesh University of Engineering and Technology, 1000, Bangladesh.
| | - Shah Alam
- Department of Civil Engineering, Rajshahi Science & Technology University, Natore, 6400, Bangladesh
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Gautam S, Osman AFI, Richeson D, Manandhar B, Alam S, Song WY. A 3D Deep Convolutional Neural Network for Dose Distribution Prediction of Intracavitary HDR Brachytherapy of Cervical Cancer. Int J Radiat Oncol Biol Phys 2023; 117:e514. [PMID: 37785606 DOI: 10.1016/j.ijrobp.2023.06.1774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
PURPOSE/OBJECTIVE(S) The purpose of this work is to develop a voxel-wise dose prediction model using convolutional neural network (CNN) for cervical cancer high-dose-rate (HDR) intracavitary brachytherapy treatment planning with tandem-and-ovoid (T&O) or tandem-and-ring (T&R) applicators. MATERIALS/METHODS A 3D U-NET CNN was implemented to generate voxel-wise dose predictions based on high-risk clinical target volume (HRCTV) and organs at risk (OAR) contour information. A multi-institutional cohort of 77 retrospective clinical HDR brachytherapy plans treated to a prescription dose in the range of 4.8-7.0 Gy/fx was used in this study. Those plans were randomly divided into 60%/20%/20% as training, validating, and testing cohorts. Data augmentation techniques were implemented in the training and validation cohort data to increase the number of plans to 252. The model was trained using the mean-squared loss function, Adam optimization algorithm, a learning rate of 0.001, 250 epochs, and a batch size of 8. The model performance was evaluated on the testing dataset by analyzing the outcomes in terms of mean dose values and derived dose-volume-histogram (DVH) indices from 3D dose distributions and comparing the generated dose distributions against the ground-truth dose distributions using dose statistics and clinically meaningful dosimetric indices. RESULTS The proposed 3D U-Net model showed competitive accuracy in predicting 3D dose distributions that closely resemble the ground truth dose distributions. The average value of mean absolute error was 0.108±3.617 Gy for HRCTV, 0.074±1.315 Gy for bladder, 0.093±0.981 Gy for rectum, and 0.035±2.789 Gy for sigmoid. The median absolute error was 1.264 Gy for HRCTV, 0. 441 Gy for the bladder, 0.018 Gy for rectum, and 0.019 Gy for sigmoid. Our results showed that the predicted mean D2cc OAR doses in the bladder, rectum, and sigmoid were 4.02±0.93, 3.77±0.57 and 3.36±0.82 Gy in comparison to 4.35±0.98, 3.99±0.53, 3.75±0.83 Gy in clinical plans, respectively, and the mean individual differences (ΔD2cc) were 0.33±0.41, 0.22±0.16 and 0.39±0.45 Gy, respectively. The predicted D90 of the HRCTV was 6.72±0.99 Gy in comparison with 6.83±1.72 Gy in clinical plans. Results indicate a good potential to predict useful dosimetric indices and thus would facilitate an improvement in brachytherapy treatment planning workflow. The proposed model needs less than 5 seconds to predict a full 3D dose distribution of 64 × 64 × 64 voxels for any new patient plan, thus making it sufficient for near real-time applications and aid in decision-making in clinic. CONCLUSION The proposed model can be used to predict 3D dose distributions for near real-time decision-making, before planning, for planning quality assurance, and for guiding future automated planning for improved plan consistency, quality, and planning efficiency.
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Affiliation(s)
- S Gautam
- Virginia Commonwealth University, RICHMOND, VA
| | - A F I Osman
- Al-Neelain University, Khartoum, None, Sudan
| | - D Richeson
- Virginia Commonwealth University, Richmond, VA
| | - B Manandhar
- Virginia Commonwealth University, Richmond, VA
| | - S Alam
- Virginia Commonwealth University, Richmond, VA
| | - W Y Song
- Virginia Commonwealth University, Richmond, VA
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Richeson D, Gholami S, Manandhar B, Alam S, Gautam S, Scanderbeg DJ, Yashar CM, Prisciandaro JI, Jolly S, Fields EC, Song WY. Direction Modulated Brachytherapy Tandem Model Applicators for Treatment Planning of Multi-Institutional Cervical Cancer Cases. Int J Radiat Oncol Biol Phys 2023; 117:e540. [PMID: 37785669 DOI: 10.1016/j.ijrobp.2023.06.1832] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
PURPOSE/OBJECTIVE(S) Direction Modulated Brachytherapy (DMBT) offers a means of utilizing an anisotropic source to create more conformal dose distributions when integrated with image-guided adaptive brachytherapy (IGABT). Authors sought to validate the implementation of nine unique six-channeled, MRI-compatible, novel DMBT tandem applicators of varying physical dimensions within Varian's BrachyVision® (v16.1) treatment planning system (BV-TPS). MATERIALS/METHODS A total of 110 retrospective clinically delivered high-dose-rate (HDR) cervical cancer brachytherapy plans, from three institutions, were re-planned for each of the nine DMBT tandem models within the BV-TPS, using the latest VEGO® inverse optimization algorithm, with dose heterogeneity accounted for through AcurosBV®. Plans consisted of both intracavitary (77 plans) and interstitial (33 plans) cases with an average prescription dose and high-risk clinical target volumes (CTVHR) of 607±113 cGy and 26.96±14.95 [range 6.70-69.58] cm3, respectively. During re-planning, the conventional tandems were replaced by one of the nine DMBT tandem models while leaving ovoids or rings, and needles (if present), in place. A two-step inverse optimization process was performed such that the lowest possible organs at risk (OAR) D2cc doses could be achieved while 1) keeping equivalent target coverage (ΔCTVHR-D90 to within ±0.5%) and, at the same time, 2) maintaining the general pear-shape dose distribution of the original plans. RESULTS Noteworthy improvements in plan quality were achieved by all nine DMBT tandem models, which are presented in Table 1. Irrespective of the model, about ∼50 cGy reduction in D2cc across all OARs appear feasible. There is also a general trend of D2cc reductions' magnitude becoming smaller as the CTVHR volume increased due to loss in modulation at distance. Additionally, D2cc reductions in terms of EQD2 [Gy] were calculated assuming each re-plan was delivered throughout the course of treatment, which includes the external beam radiotherapy dose of 45 Gy and showed significant reductions of -6.29±4.38 Gy, -3.80±2.06 Gy, and -4.86±3.02 Gy for the bladder, rectum, and sigmoid, respectively, for DMBT model #9 for example. CONCLUSION We have successfully incorporated nine DMBT tandem models into a commercial TPS and re-planned 110 cases, to a total of 990 plans. All nine DMBT tandem models were each able to generate notable D2cc reductions to OARs (∼50 cGy), without compromising target coverage, across plans from multiple institutions with various clinical/optimization practices. The results indicate both a promising impact and smooth integration of DMBT tandem technology into modern clinical IGABT workflow.
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Affiliation(s)
- D Richeson
- Virginia Commonwealth University, Richmond, VA
| | - S Gholami
- Department of Radiation Oncology, UAMS Winthrop P. Rockefeller Cancer Institute, University of Arkansas for Medical Sciences, Little Rock, AR
| | - B Manandhar
- Virginia Commonwealth University, Richmond, VA
| | - S Alam
- Virginia Commonwealth University, Richmond, VA
| | - S Gautam
- Virginia Commonwealth University, RICHMOND, VA
| | | | - C M Yashar
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, La Jolla, CA
| | | | - S Jolly
- University of Michigan, Ann Arbor, MI
| | - E C Fields
- Department of Radiation Oncology, Virginia Commonwealth University Health System, Massey Cancer Center, Richmond, VA
| | - W Y Song
- Virginia Commonwealth University, Richmond, VA
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Manandhar B, Gholami S, Richeson D, Alam S, Gautam S, Scanderbeg DJ, Yashar CM, Prisciandaro JI, Jolly S, Fields EC, Song WY. Direction Modulated Brachytherapy Tandem Model Applicators for Treatment Planning of Multi-Institutional Cervical Cancer Cases: Removing Needles in Intracavitary-Interstitial Techniques. Int J Radiat Oncol Biol Phys 2023; 117:e529-e530. [PMID: 37785642 DOI: 10.1016/j.ijrobp.2023.06.1810] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
PURPOSE/OBJECTIVE(S) To evaluate the potential of nine direction modulated brachytherapy (DMBT) tandem applicator models of various designs to obviate the need for needles during intracavitary-interstitial (IC-IS) cervical cancer brachytherapy. MATERIALS/METHODS A cohort of 33 retrospective clinical high dose-rate (HDR) brachytherapy plans, from three institutions, were re-planned with Varian's BrachyVision® (v16.1) treatment planning system (BV-TPS), using the latest VEGO® inverse optimization algorithm, with dose heterogeneity accounted for through the AcurosBV® model-based dose calculation algorithm. All plans consisted of IC-IS cases, with a range of 2-4 freehand-loaded needles, with an average prescription dose of 706±54 cGy and average high-risk clinical target volume (HRCTV) of 36.0±17.4 [range 9.8-69.6] cm3. Nine novel DMBT tandem models of varying physical dimensions were integrated for the first time into the BV-TPS, with thicknesses (4-8 mm). During re-planning, the conventional tandems and all of the needles were replaced by one of the nine DMBT tandem models while leaving the ovoids/rings in place. An optimization process was performed such that the lowest possible organs at risk (OAR) D2cc doses could be achieved while keeping equivalent target coverage (ΔHRCTV-D90 to within ±0.5%) and maintaining a pear-shape dose distribution. The process was repeated for each of the nine DMBT tandem models resulting in (33 × 9 =) 297 plans. RESULTS Average ΔHRCTV-D90 was +0.35±0.39% (+2.8±3.1 cGy). OAR D2cc reductions were achieved by all models for all plans. The performance of the thickest DMBT model (8 mm) was the best in terms of achieving the lowest D2cc for all OARs, with 31 out of 33 plans (94%) achieving lower D2cc doses for all three OARs. The two cases in which the D2cc doses could not be reduced had HRCTV volumes ranging between 50 cm3 and 60 cm3. Additionally, D2cc reductions in terms of EQD2 [Gy] were calculated assuming each re-plan was delivered throughout the entire course of a patient's treatment, which included the external beam radiotherapy dose of 45 Gy, showed significant reductions of -2.64±2.67 Gy, -1.65±1.97 Gy, and -2.80±2.20 Gy for bladder, rectum, and sigmoid, respectively. CONCLUSION According to the results, it is clinically feasible to replace the conventional IC-IS cases, with 2-4 freehand-loaded needles, with the DMBT tandem technology, effectively avoiding the need for needle involvement.
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Affiliation(s)
- B Manandhar
- Virginia Commonwealth University, Richmond, VA
| | - S Gholami
- Department of Radiation Oncology, UAMS Winthrop P. Rockefeller Cancer Institute, University of Arkansas for Medical Sciences, Little Rock, AR
| | - D Richeson
- Virginia Commonwealth University, Richmond, VA
| | - S Alam
- Virginia Commonwealth University, Richmond, VA
| | - S Gautam
- Virginia Commonwealth University, RICHMOND, VA
| | | | - C M Yashar
- University of California, San Diego, La Jolla, CA; Department of Radiation Medicine and Applied Sciences, University of California San Diego, La Jolla, CA
| | | | - S Jolly
- University of Michigan, Ann Arbor, MI; Department of Radiation Oncology, University of Michigan, Ann Arbor, MI
| | - E C Fields
- Department of Radiation Oncology, Virginia Commonwealth University Health System, Massey Cancer Center, Richmond, VA; VCU Radiation Oncology, Massey Cancer Center, Richmond, VA
| | - W Y Song
- Virginia Commonwealth University, Richmond, VA
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Alam S, Richeson D, Manandhar B, Gholami S, Gautam S, Scanderbeg DJ, Yashar CM, Prisciandaro JI, Jolly S, Fields EC, Song WY. Combining Novel Direction Modulated Brachytherapy Tandem-and-Ovoids Applicators for Treatment Planning of Multi-Institutional Cervical Cancer Cases: Removing Needles in Intracavitary-Interstitial Techniques. Int J Radiat Oncol Biol Phys 2023; 117:e545. [PMID: 37785680 DOI: 10.1016/j.ijrobp.2023.06.1843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/04/2023]
Abstract
PURPOSE/OBJECTIVE(S) Lack of standard guidelines for optimal needle insertion during high-dose-rate (HDR) intracavitary-interstitial (IC-IS) brachytherapy of the cervix means a sophisticated and technical skillset of inserting needles next to IC applicators must be developed to enhance plan quality. This study sought to evaluate the performance of two separate direction modulated brachytherapy (DMBT) tandem applicators used in conjunction with one set of novel DMBT ovoids, uniquely designed to effectively obviate the need for IS needles. MATERIALS/METHODS A cohort of 32 retrospective clinical HDR brachytherapy plans, from three institutions, were re-planned with Varian's BrachyVision® (v16.1) treatment planning system (BV-TPS), using the latest VEGO® inverse optimization algorithm, with dose heterogeneity accounted for through the AcurosBV®. All plans consisted of IC-IS cases, with a range of 2-4 freehand-loaded needles, with an average prescription dose of 709±53 cGy, and with an average high-risk clinical target volume (HRCTV) of 36.73±17.15 [range 9.8-69.6] cm3. Two DMBT tandem models of 5.4-mm and 8.0-mm thicknesses along with a novel DMBT ovoids design, introduced for the first time, with 9 equi-angled grooves and 10-mm-diameter thickness. During re-planning, the conventional tandems, ovoids/rings, and all of the needles were replaced by one of the two DMBT tandem models and a set of DMBT ovoids. A two-step inverse optimization process was performed to achieve the lowest possible OAR D2cc doses while 1) keeping equivalent target coverage (ΔHRCTV-D90 to within ±0.5%) and 2) maintaining the general pear-shape dose distribution used by the original plans. For all plans, this process was repeated using each of the two DMBT tandem-and-ovoids combinations for a total re-planning of (32×2 =) 64 cases. RESULTS On average, -47.15±29.61 (-40.40±34.90) cGy, -42.98±26.58 (-41.70±27.40) cGy, and -40.47±25.05 (-32.55±25.30) cGy reductions in D2cc across bladder, rectum, and sigmoid, respectively, were achieved for the 8-mm (5.4-mm) DMBT tandem-and-ovoids combinations while the average ΔHRCTV-D90 was +4.3±2.9 cGy (+0.5%±0.4%). Additionally, D2cc reductions in terms of EQD2 [Gy] were calculated and showed significant reductions of -4.05±2.47 (-3.37±2.83) Gy, -2.71±1.79 (-2.59±1.74) Gy, and -3.27±1.96 (-2.65±2.06) Gy for bladder, rectum, and sigmoid, respectively with an average net increase in total dwell times of 241.0±87.6 seconds at the luxury of avoiding IS needle insertions. CONCLUSION It is clinically feasible to obviate the need for IS needles by incorporating the DMBT tandem-and-ovoids while producing lower OAR D2cc doses and maintaining equivalent target coverage.
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Affiliation(s)
- S Alam
- Virginia Commonwealth University, Richmond, VA
| | - D Richeson
- Virginia Commonwealth University, Richmond, VA
| | - B Manandhar
- Virginia Commonwealth University, Richmond, VA
| | - S Gholami
- Department of Radiation Oncology, UAMS Winthrop P. Rockefeller Cancer Institute, University of Arkansas for Medical Sciences, Little Rock, AR
| | - S Gautam
- Virginia Commonwealth University, RICHMOND, VA
| | | | - C M Yashar
- Department of Radiation Medicine and Applied Sciences, University of California San Diego, La Jolla, CA
| | | | - S Jolly
- University of Michigan, Ann Arbor, MI
| | - E C Fields
- Department of Radiation Oncology, Virginia Commonwealth University Health System, Massey Cancer Center, Richmond, VA
| | - W Y Song
- Virginia Commonwealth University, Richmond, VA
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Alam S, Afsar SY, Wolter MA, Volk LM, Mitroi DN, Meyer Zu Heringdorf D, van Echten-Deckert G. S1P Lyase Deficiency in the Brain Promotes Astrogliosis and NLRP3 Inflammasome Activation via Purinergic Signaling. Cells 2023; 12:1844. [PMID: 37508508 PMCID: PMC10378183 DOI: 10.3390/cells12141844] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Revised: 06/19/2023] [Accepted: 07/06/2023] [Indexed: 07/30/2023] Open
Abstract
Astrocytes are critical players in brain health and disease. Brain pathologies and lesions are usually accompanied by astroglial alterations known as reactive astrogliosis. Sphingosine 1-phosphate lyase (SGPL1) catalysis, the final step in sphingolipid catabolism, irreversibly cleaves its substrate sphingosine 1-phosphate (S1P). We have shown that neural ablation of SGPL1 causes accumulation of S1P and hence neuronal damage, cognitive deficits, as well as microglial activation. Moreover, the S1P/S1P-receptor signaling axis enhances ATP production in SGPL1-deficient astrocytes. Using immunohistochemical methods as well as RNA Seq and CUT&Tag we show how S1P signaling causes activation of the astrocytic purinoreceptor P2Y1 (P2Y1R). With specific pharmacological agonists and antagonists, we uncover the P2Y1R as the key player in S1P-induced astrogliosis, and DDX3X mediated the activation of the NLRP3 inflammasome, including caspase-1 and henceforward generation of interleukin-1ß (IL-1ß) and of other proinflammatory cytokines. Our results provide a novel route connecting S1P metabolism and signaling with astrogliosis and the activation of the NLRP3 inflammasome, a central player in neuroinflammation, known to be crucial for the pathogenesis of numerous brain illnesses. Thus, our study opens the door for new therapeutic strategies surrounding S1P metabolism and signaling in the brain.
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Affiliation(s)
- Shah Alam
- LIMES Institute for Membrane Biology and Lipid Biochemistry, Kekulé-Institute, University of Bonn, 53115 Bonn, Germany
| | - Sumaiya Yasmeen Afsar
- LIMES Institute for Membrane Biology and Lipid Biochemistry, Kekulé-Institute, University of Bonn, 53115 Bonn, Germany
| | - Maya Anik Wolter
- LIMES Institute for Membrane Biology and Lipid Biochemistry, Kekulé-Institute, University of Bonn, 53115 Bonn, Germany
| | - Luisa Michelle Volk
- Institute for General Pharmacology and Toxicology, University Hospital, Goethe University Frankfurt am Main, 60590 Frankfurt am Main, Germany
| | - Daniel Nicolae Mitroi
- LIMES Institute for Membrane Biology and Lipid Biochemistry, Kekulé-Institute, University of Bonn, 53115 Bonn, Germany
| | - Dagmar Meyer Zu Heringdorf
- Institute for General Pharmacology and Toxicology, University Hospital, Goethe University Frankfurt am Main, 60590 Frankfurt am Main, Germany
| | - Gerhild van Echten-Deckert
- LIMES Institute for Membrane Biology and Lipid Biochemistry, Kekulé-Institute, University of Bonn, 53115 Bonn, Germany
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11
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Hossain A, Sun X, Islam S, Alam S, Mahmud Hossain M. Identifying roadway departure crash patterns on rural two-lane highways under different lighting conditions: Association knowledge using data mining approach. J Safety Res 2023; 85:52-65. [PMID: 37330901 DOI: 10.1016/j.jsr.2023.01.006] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/25/2022] [Revised: 10/03/2022] [Accepted: 01/17/2023] [Indexed: 06/19/2023]
Abstract
INTRODUCTION More than half of all fatalities on U.S. highways occur due to roadway departure (RwD) each year. Previous research has explored various risk factors that contribute to RwD crashes, however, a comprehensive investigation considering the effect of lighting conditions has been insufficiently addressed. DATA Using the Louisiana Department of Transportation and Development crash database, fatal and injury RwD crashes occurring on rural two-lane (R2L) highways between 2008-2017 were analyzed based on daylight and dark (with and without streetlight). METHOD This research employed a safe system approach to explore meaningful complex interactions among multidimensional crash risk factors. To accomplish this, an unsupervised data mining algorithm association rules mining (ARM) was utilized. RESULTS AND CONCLUSIONS Based on the generated rules, the findings reveal several interesting crash patterns in the daylight, dark-with-streetlight, and dark-no-streetlight, emphasizing the importance of investigating RwD crash patterns depending on the lighting conditions. In daylight condition, fatal RwD crashes are associated with cloudy weather conditions, distracted drivers, standing water on the roadway, no seat belt use, and construction zones. In dark lighting condition (with and without streetlight), the majority of the RwD crashes are associated with alcohol/drug involvement, young drivers (15-24 years), driver condition (e.g., inattentive, distracted, illness/fatigued/asleep), and colliding with animal(s). PRACTICAL APPLICATIONS The findings also reveal how certain driver behavior patterns are connected to RwD crashes, such as a strong association between alcohol/drug intoxication and no seat belt usage in the dark-no-streetlight condition. Based on the identified crash patterns and behavioral characteristics under different lighting conditions, the findings could aid researchers and safety specialists in developing the most effective RwD crash mitigation strategies.
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Affiliation(s)
- Ahmed Hossain
- Department of Civil Engineering, University of Louisiana at Lafayette, Lafayette, LA 70504, USA.
| | - Xiaoduan Sun
- Department of Civil Engineering, University of Louisiana at Lafayette, Lafayette, LA 70504, USA
| | - Shahrin Islam
- Department of Civil Engineering, Bangladesh University of Engineering and Technology (BUET), Dhaka 1000, Bangladesh
| | - Shah Alam
- Department of Civil Engineering, Rajshahi Science and Technology University, Natore 6400, Rajshahi, Bangladesh
| | - Md Mahmud Hossain
- Department of Civil and Environmental Engineering, Auburn University, Auburn 36849, AL, USA
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12
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Iqbal M, MORSHED R, Ershad S, Ahsan Z, Ishraq M, Choudhury S, Malik F, Ahmed M, Alam K, Rahman M, Hassan M, Alam S, Adhikary D, Hassan M, Arslan M. WCN23-1235 STATUS OF ANTIBODY AGAINST SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2: PRELIMINARY REPORTS ON SEROPREVALENCE OF COVID 19 IN AMONG HEALTH CARE WORKERS. Kidney Int Rep 2023. [PMCID: PMC10025674 DOI: 10.1016/j.ekir.2023.02.1041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2023] Open
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13
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Alam S, Afsar SY, Van Echten-Deckert G. S1P Released by SGPL1-Deficient Astrocytes Enhances Astrocytic ATP Production via S1PR 2,4, Thus Keeping Autophagy in Check: Potential Consequences for Brain Health. Int J Mol Sci 2023; 24:ijms24054581. [PMID: 36902011 PMCID: PMC10003137 DOI: 10.3390/ijms24054581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2023] [Revised: 02/22/2023] [Accepted: 02/24/2023] [Indexed: 03/02/2023] Open
Abstract
Astrocytes are critical players in brain health and disease. Sphingosine-1-phosphate (S1P), a bioactive signaling lipid, is involved in several vital processes, including cellular proliferation, survival, and migration. It was shown to be crucial for brain development. Its absence is embryonically lethal, affecting, inter alia, the anterior neural tube closure. However, an excess of S1P due to mutations in S1P-lyase (SGPL1), the enzyme responsible for its constitutive removal, is also harmful. Of note, the gene SGPL1 maps to a region prone to mutations in several human cancers and also in S1P-lyase insufficiency syndrome (SPLIS) characterized by several symptoms, including peripheral and central neurological defects. Here, we investigated the impact of S1P on astrocytes in a mouse model with the neural-targeted ablation of SGPL1. We found that SGPL1 deficiency, and hence the accumulation of its substrate, S1P, causes the elevated expression of glycolytic enzymes and preferentially directs pyruvate into the tricarboxylic acid (TCA) cycle through its receptors (S1PR2,4). In addition, the activity of TCA regulatory enzymes was increased, and consequently, so was the cellular ATP content. The high energy load activates the mammalian target of rapamycin (mTOR), thus keeping astrocytic autophagy in check. Possible consequences for the viability of neurons are discussed.
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Banik B, Alam S, Chakraborty A. Comparative study between GRA and MEREC technique on an agricultural-based MCGDM problem in pentagonal neutrosophic environment. Int J Environ Sci Technol (Tehran) 2023; 20:1-16. [PMID: 36817165 PMCID: PMC9928147 DOI: 10.1007/s13762-023-04768-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Revised: 12/16/2022] [Accepted: 01/06/2023] [Indexed: 06/18/2023]
Abstract
In this research article, an improved Multi-criteria group decision-making (MCGDM) strategy has been developed in pentagonal neutrosophic environment incorporating grey relational analysis and method on the removal effects of criteria (MEREC) techniques to address the relative advantages and disadvantages of these aspects in MCGDM. The aim of the study is to improve MCGDM technique which can capture the underlying uncertainties in robust way and can produce consistent results in a more rigorous way. Here, the conception of Hamming distance between two pentagonal neutrosophic number (PNN)s is introduced and the weighted arithmetic and geometric averaging operators in PNN arena are deployed to craft our computational technique more progressive and robust. An agriculture-based numerical problem is illustrated to demonstrate the ranking results of the alternatives by both of the techniques. After evaluating the problem by two aggregation operators, it is found that "plantation crop" is the best alternative under certain circumstances. Lastly, the sensitivity investigation is performed which reveals that with the appliance of arithmetic and geometric aggregation operators the best ranked alternative preserves its position by both of the ranking methods, which definitely exhibit the consistency and robustness of our executed methodology.
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Affiliation(s)
- B. Banik
- Department of Mathematics, Indian Institute of Engineering Science and Technology, Shibpur, Howrah, 711103 India
| | - S. Alam
- Department of Mathematics, Indian Institute of Engineering Science and Technology, Shibpur, Howrah, 711103 India
| | - A. Chakraborty
- Department of Engineering Science, Academy of Technology, Adisaptagram, West Bengal 712502 India
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15
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Faysal MR, Akter T, Hossain MS, Begum S, Banu M, Tasnim J, Sultana I, Krishna SP, Alam S, Akter T, Jenea AT. Study of Serum Calcium and Magnesium Levels in Type 2 Diabetes Mellitus Patients. Mymensingh Med J 2023; 32:54-60. [PMID: 36594301] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
The prevalence of diabetes mellitus is a significant global public health concern, particularly in emerging nations like Bangladesh. Bangladesh is already overrun with non-communicable diseases while still battling communicable diseases. About 90.0% of all cases of diabetes that have been diagnosed are type 2 diabetes. High calorie diet, age, sedentary lifestyle and obesity are the main risk factors for type 2 diabetes. Different micronutrients have been linked to an increased incidence of diabetes in addition to existing risk factors. The goal of the study was to assess the serum levels of calcium and magnesium in people with type 2 diabetes mellitus and compare them to those in healthy controls. This cross-sectional study was conducted from July 2018 to June 2019 at the Mymensingh Medical College, Mymensingh, Department of Biochemistry in cooperation with the Department of Endocrinology, Mymensingh Medical College Hospital, Mymensingh, Bangladesh. Purposive (non-random) sampling was used to pick the subjects based on inclusion and exclusion criteria. This study had 100 individuals in total. Out of them, 50 people with type 2 diabetes mellitus who had been diagnosed were chosen as cases, and another 50 people who appeared to be in generally good health were chosen as controls. Serum calcium and magnesium levels were measured for this study's analytical purposes. The mean±SD was used to express all values. The statistical package for social science (SPSS), a Windows application, was used to conduct the statistical analyses. Using the Student's unpaired 't' test, the statistical significance of the difference between the case and control groups was assessed. Following comprehensive analysis, it was discovered that type 2 diabetes mellitus patients had considerably lower mean serum calcium (in case group was 8.46±0.63 and control group 8.86±0.64mg/dl) and magnesium levels (in case group was 2.09±0.42 and control group 2.24±0.16mg/dl) than healthy controls. According to the results of the current investigation, patients with type 2 diabetes mellitus had significantly altered serum calcium and magnesium levels. As a result, the study's hypothesis was accepted.
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Affiliation(s)
- M R Faysal
- Dr Mohammad Robin Faysal, Assistant Professor, Department of Biochemistry, Mymensingh Medical College (MMC), Mymensingh, Bangladesh; E-mail:
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16
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Begum S, Sultana I, Faysal MR, Alam S, Tasnim J, Akter T, Hossain MS, Banu M, Jenea AT, Hasan M, Krishna SP, Tuli JZ, Sarkar S, Akhter S. Study of Changes in Serum Copper Level in Patients with Acute Myocardial Infarction. Mymensingh Med J 2023; 32:39-43. [PMID: 36594298] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Acute myocardial infarction (AMI) commonly known as heart attack is defined pathologically as the irreversible death of myocardial cells caused by ischemia. Risk factors include high blood pressure, smoking, diabetes, lack of exercise, obesity, high blood cholesterol and excessive alcohol intake. The major cause of acute MI is coronary atherosclerosis with superimposed luminal thrombus, which accounts for more than 80% of all infarcts. Micronutrients and trace elements are very essential for normal functioning of the body. Even though they are required in very small amount, an alteration in the level of this element may lead to serious diseases like CAD and its consequences. The injury induced by reperfusion of the ischemic myocardium could result partially from the cytotoxic effects of oxygen free radicals. Copper is involved in several of the reactions in the protection from free radical damage. So, this study was designed to evaluate serum cupper level in AMI patients. This case-control study was conducted in the Department of Biochemistry, Mymensingh Medical College, Mymensingh, Bangladesh from July 2016 to June 2017. Total number of subjects was 120 in number. Among them 60 were diagnosed case of acute myocardial infarction and 60 were apparently healthy volunteers. Data were collected using pre-designed data collection sheets. After proper counseling informed written consent was taken from the study population. The study revealed that mean serum copper level was higher in case group as compared to control group. The mean±SD values of copper were 105.44±24.15μg/dl and 146.49±23.52μg/dl in control and case group respectively. The level of significance was 0.001 (p<0.05). After analyzing the results of the study it is concluded that serum copper level was significantly higher in Acute Myocardial Infarction patients than normal individuals. Therefore, estimation of serum copper level in AMI patients might be useful to take appropriate measure to prevent free radical induced reperfusion injury.
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Affiliation(s)
- S Begum
- Dr Sumaiya Begum, Lecturer, Department of Biochemistry, Mymensingh Medical College (MMC), Mymensingh, Bangladesh; E-mail:
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17
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Qadeer A, Khan ME, Alam S. Tilt angle optimisation by Taylor’s series expansion for maximum solar radiation in humid subtropical regions of India. International Journal of Ambient Energy 2022; 43:6702-6708. [DOI: 10.1080/01430750.2022.2044380] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 02/14/2022] [Indexed: 09/01/2023]
Affiliation(s)
- Abdul Qadeer
- Department of Mechanical Engineering, Jamia Millia Islamia, New Delhi, India
| | - M. Emran Khan
- Department of Mechanical Engineering, Jamia Millia Islamia, New Delhi, India
| | - Shah Alam
- University Polytechnic, Jamia Millia Islamia, New Delhi, India
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18
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Sultana I, Sultana N, Rabbany MA, Banu M, Begum S, Alam S, Tasnim J, Akter T, Hossain MS, Akter S, Faysal MR. Evaluation of Liver Function Tests in β-Thalassemia Major Children. Mymensingh Med J 2022; 31:894-899. [PMID: 36189529] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Thalassemia is the most prevalent single gene defect in human beings worldwide. Repeated blood transfusions along with chelation therapy are mainstay of treatment in thalassemia patients. However these recurrent blood transfusions result in iron overload which along with chelation therapy causes deterioration of liver function. Aim of the study was to evaluate the liver function tests in β-thalassemia major patients. This cross sectional study was conducted in the Department of Biochemistry, Dhaka Medical College, Dhaka, Bangladesh from January 2017 to December 2017. In this study, 50 diagnosed patients of β Thalassemia major (Group A) and 50 apparently healthy children (Group B) of both sexes were selected from the department of Paediatrics, Dhaka medical college. The study parameters were serum ferritin, bilirubin, AST, ALT, ALP. The results were compared statistically between groups. Serum ferritin level (mean±SD) in thalassemic major patients in Group A (890±446.38 microgram/L) which is significantly higher above normal level. Serum bilirubin in Group A (3.27±2.62 mg/dl) and in Group B (0.48±0.24 mg/dl), Serum ALT in Group A (53.06±34.0 U/L) and in Group B (16.70±4.81 U/L), AST in Group A (84.56±33.54 U/L) and in Group B (11.60±2.72 U/L) and ALP levels in Group A (422.42±226.99 IU/L) and in Group B (221.86±80.54 IU/L). All the values were significantly higher (p<0.001) in β-thalassemia patient than that of normal children. This study concludes that liver function parameters are significantly higher in β thalassemia major patients. So routine evaluation of liver function tests may be advocated for thalassemic patients to predict early onset of hepatic dysfunction.
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Affiliation(s)
- I Sultana
- Dr Irin Sultana, Assistant Professor, Department of Biochemistry, Mymensingh Medical College (MMC), Mymensingh, Bangladesh; E-mail:
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19
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Afsar SY, Alam S, Fernandez Gonzalez C, van Echten‐Deckert G. Sphingosine‐1‐phosphate‐lyase deficiency affects glucose metabolism in a way that abets oncogenesis. Mol Oncol 2022; 16:3642-3653. [PMID: 35973936 PMCID: PMC9580888 DOI: 10.1002/1878-0261.13300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 07/25/2022] [Accepted: 08/05/2022] [Indexed: 11/30/2022] Open
Abstract
Sphingosine‐1‐phosphate (S1P), a bioactive signaling lipid, is involved in several vital processes, including cellular proliferation, survival and migration, as well as neovascularization and inflammation. Its critical role in the development and progression of cancer is well documented. The metabolism of S1P, which exerts its effect mainly via five G protein‐coupled receptors (S1PR1–5), is tightly regulated. S1P‐lyase (SGPL1) irreversibly cleaves S1P in the final step of sphingolipid catabolism and exhibits remarkably decreased enzymatic activity in tumor samples. In this study, we used SGPL1‐deficient (Sgpl1−/−) mouse embryonic fibroblasts (MEFs) and investigated the impact of S1P on glucose metabolism. Accumulated S1P activates, via its receptors (S1PR1–3), hypoxia‐inducible factor 1 and stimulates the expression of proteins involved in glucose uptake and breakdown, indicating that Sgpl1−/− cells, like cancer cells, prefer to convert glucose to lactate even in the presence of oxygen. Accordingly, their rate of proliferation is significantly increased. Activation of the Akt/mTOR pathway and hence down‐regulation of autophagy indicate that these changes do not negatively affect the cellular energy status. In summary, we report on a newly identified role of the S1P/S1PR1–3 axis in glucose metabolism in SGPL1‐deficient MEFs.
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Affiliation(s)
- Sumaiya Y. Afsar
- LIMES Institute for Membrane Biology and Lipid Biochemistry University Bonn Germany
| | - Shah Alam
- LIMES Institute for Membrane Biology and Lipid Biochemistry University Bonn Germany
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20
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Ben Salah A, DeAngelis BN, Morales D, Bongard S, Leufen L, Johnson R, Olmos M, Alam S, Kuzmina S, Levenstein S, Li B, Renati S, al'Absi M. A multinational study of psychosocial stressors and symptoms associated with increased substance use during the early wave of the COVID-19 Pandemic: The role of polysubstance use. Cogent Psychology 2022. [DOI: 10.1080/23311908.2022.2054162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022] Open
Affiliation(s)
- Arwa Ben Salah
- Community Medicine Department, Faculty of Medicine of Monastir, University of Monastir, Monastir, Tunisia
| | - Briana N DeAngelis
- Department of Family Medicine and Biobehavioral Health, University of Minnesota Medical School, Duluth & Minneapolis, USA
| | - Daniela Morales
- Department of Family Medicine and Biobehavioral Health, University of Minnesota Medical School, Duluth & Minneapolis, USA
| | - Stephan Bongard
- Department of Psychology, Goethe-University, Frankfurt am Main, Germany
| | - Luke Leufen
- Faculty of Communication and Environment, Rhine-Waal University of Applied Sciences, Kamp-Lintfort, Germany
| | - Ryan Johnson
- Department of Family Medicine and Biobehavioral Health, University of Minnesota Medical School, Duluth & Minneapolis, USA
| | - Marina Olmos
- Developmental and Educational Psychology, University of Murcia, Spain
| | - Shah Alam
- Department of Psychology, Aligarh Muslim University, Uttar Pradesh, India
| | - Svetlana Kuzmina
- Department of Psychiatry, Kazan State Medical University, Kazan, Russia
| | | | - Bingshuo Li
- Netherlands Institute for Neuroscience, Royal Netherlands Academy of Arts and Sciences, Noord-Holland, Netherlands
| | - Solomon Renati
- Department of Psychology, Veer Wajekar Arts, Science & Commerce College, Navi Mumbai, India
| | - Mustafa al'Absi
- Department of Family Medicine and Biobehavioral Health, University of Minnesota Medical School, Duluth & Minneapolis, USA
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21
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Yue C, Cao J, Wong A, Kim JH, Alam S, Luong G, Talegaonkar S, Schwartz Z, Boyan BD, Giannobile WV, Sahingur SE, Lin Z. Human Bone Marrow Stromal Cell Exosomes Ameliorate Periodontitis. J Dent Res 2022; 101:1110-1118. [PMID: 35356822 PMCID: PMC9305845 DOI: 10.1177/00220345221084975] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022] Open
Abstract
Human bone marrow stromal cell (hBMSC)-derived exosomes are promising therapeutics for inflammatory diseases due to their unique microRNA (miRNA) and protein cargos. Periodontal diseases often present with chronicity and corresponding exuberant inflammation, which leads to loss of tooth support. In this study, we explored whether hBMSC exosomes can affect periodontitis progression. hBMSC exosomes were isolated from cell culture medium through sequential ultracentrifugation. miRNAs and proteins that were enriched in hBMSC exosomes were characterized by RNA sequencing and protein array, respectively. hBMSC exosomes significantly suppressed periodontal keystone pathogen Porphyromonas gingivalis-triggered inflammatory response in macrophages in vitro. Transcriptomic analysis suggested that exosomes exerted their effects through regulating cell metabolism, differentiation, and inflammation resolution. In vivo, weekly exosome injection into the gingival tissues reduced the tissue destruction and immune cell infiltration in rat ligature-induced periodontitis model. Collectively, these findings suggest that hBMSC-derived exosomes can potentially be used as a host modulation agent in the management of periodontitis.
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Affiliation(s)
- C Yue
- Department of Periodontics, School of Dentistry, Virginia Commonwealth University, Richmond, VA, USA
| | - J Cao
- Department of Periodontics, School of Dentistry, Virginia Commonwealth University, Richmond, VA, USA.,Department of Periodontology, Peking University School and Hospital of Stomatology, National Clinical Research Center for Oral Diseases, National Engineering Laboratory for Digital and Material Technology of Stomatology, Beijing Key Laboratory of Digital Stomatology, Beijing, People's Republic of China
| | - A Wong
- Department of Periodontics, School of Dentistry, Virginia Commonwealth University, Richmond, VA, USA
| | - J H Kim
- Department of Periodontics, School of Dentistry, Virginia Commonwealth University, Richmond, VA, USA
| | - S Alam
- Department of Periodontics, School of Dentistry, Virginia Commonwealth University, Richmond, VA, USA
| | - G Luong
- Department of Periodontics, School of Dentistry, Virginia Commonwealth University, Richmond, VA, USA
| | - S Talegaonkar
- Department of Periodontics, School of Dentistry, Virginia Commonwealth University, Richmond, VA, USA
| | - Z Schwartz
- Department of Biomedical Engineering, Virginia Commonwealth University, Richmond, VA, USA
| | - B D Boyan
- Department of Biomedical Engineering, Virginia Commonwealth University, Richmond, VA, USA
| | - W V Giannobile
- Department of Oral Medicine, Infection, and Immunity, Harvard School of Dental Medicine, Boston, MA, USA
| | - S E Sahingur
- Department of Periodontics, School of Dental Medicine, University of Pennsylvania, PA, USA
| | - Z Lin
- Department of Periodontics, School of Dentistry, Virginia Commonwealth University, Richmond, VA, USA
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22
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Castaneda-Caicedo E, Khwaja M, Alam S, Warrior S. 745 PROACTIVE INPUT FROM GERIATRICIAN LED SURGICAL LIAISON SERVICE FOR OLDER SURGICAL PATIENTS AT ROYAL BERKSHIRE HOSPITAL, READING. Age Ageing 2022. [DOI: 10.1093/ageing/afac034.745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
Introduction
Need for a geriatrician in the peri operative care of older surgical patients is evident by the NCEPOD reports in 2010 and 2011. Funding for Consultant Geriatrician led surgical liaison service for RBH was approved in 2014.We present a comparative review of the service during 2019/2020.
Methods
A retrospective audit of elective and emergency surgical patients over 65 years of age from January to March 2019 and June to September 2020 was done. Geriatrician input was provided on weekdays by Less than full time (80%) equivalent Consultant, 1 full time equivalent physician associate and a Gerontology Registrar on pro rota basis.
Results
We reviewed 76 patients in 2019 (Emergency 74/76 = 95% Vs Elective 2/76 = 3%) and 161patients in 2020 (Emergency134/161 = 83% Vs Elecetive27/161 = 17%). Majority of emergency presentations were small bowel obstruction, acute cholecystitis, and pancreatitis while laparoscopic right hemi colectomy was the commonest elective surgical admission. The average age of patients was 72 years (2019) and 79 years (2020). Length of stay up to 5 days reduced from 75% (51/76) in 2019 to 43% (70/161) in 2020. The overall length of stay reduced from 12 days to 8.5 days in 2019 and 2020, respectively 30 days readmission rate increased from 21% (16/76) in 2019 to 25.5% (41/161) in 2020. 75% (2019) and 96% (2020) of patients were discharged back to their usual residence and death rates reduced from 14% to 1% between the 2 audits.
Conclusion
There is an increase in patient number, age, and complexity. Number of elective surgical admissions after the 1st Covid wave has risen. Even with less than full time Consultant Geriatrician cover the service has helped to reduce the overall length of hospital, mortality rate and added to cost saving. There is need for senior cover for service to work efficiently and to meet its ever-increasing demand.
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Affiliation(s)
| | - M Khwaja
- Royal Berkshire Hospital, Reading, UK
| | - S Alam
- Royal Berkshire Hospital, Reading, UK
| | - S Warrior
- Royal Berkshire Hospital, Reading, UK
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Ballanamada Appaiah N, Probert S, Menon N, Alam S. 142 Amyand’s Hernia: An Extensive Review of History, Aetiopathogenesis, Symptomatology, and Management – Should We Scan, Scope & Snip? Br J Surg 2022. [DOI: 10.1093/bjs/znac039.082] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Abstract
Background
Amyand’s hernia, first described by Claudius Amyand in 1735, continues to remain a diagnostic & therapeutic challenge. By definition includes inguinal herniae that contain the vermiform appendix.
Aim
This up-to-date review aims to define and classify Amyand’s hernia and suggest appropriate management options in the current era. Aim to shed light on the value of pre-operative cross-sectional imaging and the use of laparoscopic surgery to provide a one stop solution.
Method
Published English literature was reviewed (1735–2021), using PubMed and Embase, combining the MeSH terms “hernia”, “inguinal”, “appendix”, “Amyand”, “low dose CT” and “laparoscopic herniotomy”. Most cited open access reviews, case series and case reports were chosen to provide a framework. A recent case is described with selected images (radiological, histology and intra operative).
Results
Since the original publication, by Claudius Amyand in 1735, there exists a gulf on this condition in the available British medical literature. Nearly 100,000 hernia repairs are performed in the UK annually. If Amyand’s hernia account for 1% of these (according to the most stated estimate), there should be a thousand Amyand’s herniae repaired annually in the UK alone. Unfortunately, the management options remain nonstandard.
Conclusions
Computerized tomography (CT) allows for pre-operative diagnosis and should be considered more often, even in children. Laparoscopic appendicectomy combined with a laparoscopic herniotomy is a safe one stop solution, in experienced hands, for paediatric patients.
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Affiliation(s)
| | - S. Probert
- Basildon & Thurrock University Hospital, Basildon, United Kingdom
| | - N.J. Menon
- Basildon & Thurrock University Hospital, Basildon, United Kingdom
| | - S. Alam
- Basildon & Thurrock University Hospital, Basildon, United Kingdom
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Masood S, Rehman AU, Ihsan MA, Shahzad K, Sabir M, Alam S, Ahmed W, Shah ZH, Alghabari F, Mehmood A, Chung G. Antioxidant potential and α-glucosidase inhibitory activity of onion (Allium cepa L.) peel and bulb extracts. BRAZ J BIOL 2021; 83:00264. [PMID: 34669793 DOI: 10.1590/1519-6984.247168] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2021] [Accepted: 05/01/2021] [Indexed: 11/22/2022] Open
Abstract
Allium cepa L. is a commonly consumed vegetable that belongs to the Amaryllidaceae family and contains nutrients and antioxidants in ample amounts. In spite of the valuable food applications of onion bulb, its peel and outer fleshy layers are generally regarded as waste and exploration of their nutritional and therapeutic potential is still in progress with a very slow progression rate. The present study was designed with the purpose of doing a comparative analysis of the antioxidant potential of two parts of Allium cepa, i.g., bulb (edible part) and outer fleshy layers and dry peels (inedible part). Moreover, the inhibitory effect of the onion bulb and peel extracts on rat intestinal α-glucosidase and pancreatic α-amylase of porcine was also evaluated. The antioxidant potential of onion peel and bulb extracts were evaluated using 2,2-diphenyl- 1-picryl hydrazyl (DPPH), ferric-reducing antioxidant power assay (FRAP), 2,2'-azino-bis- 3-ethylbenzothiazoline-6-sulfonic acid (ABTS) radical scavenging assay, H2O2 radical scavenging activity and Fe2+ chelating activity. Total flavonoids and phenolic content of ethanolic extract of onion peel were significantly greater as compared to that of onion bulb. Ethanolic extract of onion peel also presented better antioxidant and free-radical scavenging activity as compared to the ethanolic extract of bulb, while the aqueous extract of bulb presented weakest antioxidative potential. Onion peel extract's α-glucosidase inhibition potential was also correlated with their phenolic and flavonoid contents. The current findings presented onion peel as a possible source of antioxidative agents and phenolic compounds that might be beneficial against development of various common chronic diseases that might have an association with oxidative stress. Besides, outer dry layers and fleshy peels of onion exhibited higher phenolic content and antioxidant activities, compared to the inner bulb. The information obtained by the present study can be useful in promoting the use of vegetable parts other than the edible mesocarp for several future food applications, rather than these being wasted.
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Affiliation(s)
- S Masood
- University of Lahore, Faculty of Allied Health Sciences, University Institute of Diet and Nutritional Sciences - UIDNS, Lahore, Pakistan
| | - A Ur Rehman
- Natural Resources Institute (Luke), Horticulture Technologies, Production Systems Unit, Piikkiö, Finland.,University of Helsinki, Faculty of Agriculture and Forestry, Department of Agricultural Sciences, Helsinki, Finland
| | - M A Ihsan
- University of Padova, Department of Agronomy, Animals, Food, Natural Resources and Environment - DAFNAE, Padova, Italy
| | - K Shahzad
- The University of Haripur, Department of Plant Breeding and Genetics, Haripur, Pakistan
| | - M Sabir
- The University of Haripur, Department of Microbiology, Haripur, Pakistan
| | - S Alam
- The University of Haripur, Department of Microbiology, Haripur, Pakistan
| | - W Ahmed
- The University of Haripur, Department of Plant Breeding and Genetics, Haripur, Pakistan
| | - Z H Shah
- Pir Mehr Ali Shah Arid Agriculture University, Department of Plant Breeding and Genetics, Rawalpindi, Pakistan
| | - F Alghabari
- King Abdulaziz University, Department of Arid Land Agriculture, Jeddah, Saudi Arabia
| | - A Mehmood
- The University of Haripur, Department of Soil & Climate Sciences, Haripur, Pakistan
| | - G Chung
- Chonnam National University, Department of Biotechnology, Yeosu, Chonnam, South Korea
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25
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Nadeem MF, Khattak AA, Zeeshan N, Awan UA, Alam S, Ahmed W, Gul S, Afroz A, Sughra K, Rashid U, Khan MAU. Molecular Epidemiology of Plasmodium species in Conflicted Federally Administered Tribal Area (FATA) Pakistan. BRAZ J BIOL 2021; 83:e247219. [PMID: 34468526 DOI: 10.1590/1519-6984.247219] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Accepted: 03/29/2021] [Indexed: 11/21/2022] Open
Abstract
Military conflicts have been significant obstacles in detecting and treating infectious disease diseases due to the diminished public health infrastructure, resulting in malaria endemicity. A variety of violent and destructive incidents were experienced by FATA (Federally Administered Tribal Areas). It was a struggle to pursue an epidemiological analysis due to continuing conflict and Talibanization. Clinical isolates were collected from Bajaur, Mohmand, Khyber, Orakzai agencies from May 2017 to May 2018. For Giemsa staining, full blood EDTA blood samples have been collected from symptomatic participants. Malaria-positive microscopy isolates were spotted on filter papers for future Plasmodial molecular detection by nested polymerase chain reaction (nPCR) of small subunit ribosomal ribonucleic acid (ssrRNA) genes specific primers. Since reconfirming the nPCR, a malariometric study of 762 patients found 679 positive malaria cases. Plasmodium vivax was 523 (77%), Plasmodium falciparum 121 (18%), 35 (5%) were with mixed-species infection (P. vivax plus P. falciparum), and 83 were declared negative by PCR. Among the five agencies of FATA, Khyber agency has the highest malaria incidence (19%) with followed by P. vivax (19%) and P. falciparum (4.1%). In contrast, Kurram has about (14%), including (10.8%) P. vivax and (2.7%) P. falciparum cases, the lowest malaria epidemiology. Surprisingly, no significant differences in the distribution of mixed-species infection among all five agencies. P. falciparum and P. vivax were two prevalent FATA malaria species in Pakistan's war-torn area. To overcome this rising incidence of malaria, this study recommends that initiating malaria awareness campaigns in school should be supported by public health agencies and malaria-related education locally, targeting children and parents alike.
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Affiliation(s)
- M F Nadeem
- University of Gujrat, Department of Biochemistry & Biotechnology, Gujrat, Punjab, Pakistan
| | - A A Khattak
- The University of Haripur, Department of Medical Laboratory Technology, Haripur, Khyber Pakhtunkhwa, Pakistan
| | - N Zeeshan
- University of Gujrat, Department of Biochemistry & Biotechnology, Gujrat, Punjab, Pakistan
| | - U A Awan
- The University of Haripur, Department of Medical Laboratory Technology, Haripur, Khyber Pakhtunkhwa, Pakistan
| | - S Alam
- The University of Haripur, Department of Microbiology, Haripur, Khyber Pakhtunkhwa, Pakistan
| | - W Ahmed
- The University of Haripur, Department of Microbiology, Haripur, Khyber Pakhtunkhwa, Pakistan
| | - S Gul
- National University of Medical Sciences, Department of Biological Sciences, Rawalpindi, Punjab, Pakistan
| | - A Afroz
- University of Gujrat, Department of Biochemistry & Biotechnology, Gujrat, Punjab, Pakistan
| | - K Sughra
- University of Gujrat, Department of Biochemistry & Biotechnology, Gujrat, Punjab, Pakistan
| | - U Rashid
- University of Gujrat, Department of Biochemistry & Biotechnology, Gujrat, Punjab, Pakistan
| | - M A U Khan
- University of Gujrat, Department of Biochemistry & Biotechnology, Gujrat, Punjab, Pakistan
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Muhammad S, Habiba U, Raza G, Bano SA, Shah S, Sabir M, Amin M, Alam S, Akhtar A, Hussain M. Payment for ecosystem services (PES): a holistic tool for sustainable forest management-a case study from Pakistan. BRAZ J BIOL 2021; 83:e246002. [PMID: 34378665 DOI: 10.1590/1519-6984.246002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2020] [Accepted: 01/14/2021] [Indexed: 11/21/2022] Open
Abstract
Economic valuation of ecosystem services is a new concept in forest management. Economic valuation provides basis for payment for ecosystem services (PES). Therefore, objective of this study was to evaluate eco-tourism and carbon stock services of the Maindam valley, District Swat, Pakistan. For the carbon stock calculation, a sample size of 155 plots of 0.1 hectare (Ha) was taken using preliminary survey at 95% confidence interval and 10% allowable error. The data for tourism services was collected from owners of all the hotels, 100 tourists and key informants of the area at 10% sampling intensity on pretested questionnaire for twenty years period (1997-2017). Results showed that Miandam valley has carbon stock worth US$ 16,306,000 while the value of eco-tourism was US$ 1,578,458 on annual basis. The results also showed that trend of tourism has drastically declined after the 9/11 incident for foreigners and locals and the situation was further deteriorated during the era of Talibanization or militancy from 2008-2011. This study recommends implementation of PES strategy at the rate of 5%, thus a total of US$ 78,922 can be earned from eco-tourism and carbon crediting in the study area annually, which could play important role in sustainable forest management.
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Affiliation(s)
- S Muhammad
- University of Haripur, Department of Forestry and Wildlife Management, Khyber Pakhtunkhwa, Pakistan.,University of Swat, Institute of Agriculture Sciences and Forestry, Khyber Pakhtunkhwa, Pakistan
| | - U Habiba
- University of Haripur, Department of Forestry and Wildlife Management, Khyber Pakhtunkhwa, Pakistan
| | - G Raza
- University of Baltistan, Department of Biological Sciences, Skardu, Gilgit-Baltistan, Pakistan
| | - S A Bano
- University of Haripur, Department of Microbiology, Khyber Pakhtunkhwa, Pakistan
| | - S Shah
- University of Swat, Institute of Agriculture Sciences and Forestry, Khyber Pakhtunkhwa, Pakistan
| | - M Sabir
- University of Haripur, Department of Microbiology, Khyber Pakhtunkhwa, Pakistan
| | - M Amin
- Shaheed Benazir Bhutto University, Department of Environmental Sciences, Sheringal, Dir (U), Khyber Pakhtunkhwa, Pakistan
| | - S Alam
- University of Haripur, Department of Microbiology, Khyber Pakhtunkhwa, Pakistan
| | - A Akhtar
- University of Haripur, Department of Psychology, Khyber Pakhtunkhwa, Pakistan
| | - M Hussain
- University of Haripur, Department of Forestry and Wildlife Management, Khyber Pakhtunkhwa, Pakistan
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27
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Rehman JU, Alam S, Khalil S, Hussain M, Iqbal M, Khan KA, Sabir M, Akhtar A, Raza G, Hussain A, Habiba U. Major threats and habitat use status of Demoiselle crane (Anthropoides virgo), in district Bannu, Pakistan. BRAZ J BIOL 2021; 82:e242636. [PMID: 34346960 DOI: 10.1590/1519-6984.242636] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Accepted: 11/19/2020] [Indexed: 11/21/2022] Open
Abstract
Cranes are the large and attractive Creatures of nature with long necks, legs, and life-span. Adults of both sexes are the same with similar color patterns. Demoiselle cranes spend most of their lifespan on dry grasses. They are also found around the stream, rivers, shallow lakes, natural wetlands, and depressions. To evaluate the current status of habitat use and major threats a study was conducted in tehsil Domel district Bannu. Line transect method and water quality tests (temperature, PH, contamination of E-coli bacteria) were used. To determine the major threats questionnaire method was used. The whole data was analyzed by using SPSS 21 version. Based on the distribution four study sites were selected and four water samples from each study site were taken. Most sites were moderate to highly degraded except Kashoo and kurram river mixing point which was low degraded with livestock grazing and human activities. Water quality tests showed PH ranges from 7-9, temperature 6.5-8.5, and contamination of E-coli in all samples. The social survey revealed that hunting, habitat degradation, and pollution as major threats. Effective long-term conservation and management in the study area are needed to focus on the protection of disturbance-free habitat.
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Affiliation(s)
- J U Rehman
- The University of Haripur, Faculty of Basic and Applied Science, Department of Forestry and Wildlife Management, Haripur, Pakistan
| | - S Alam
- The University of Haripur, Faculty of Basic and Applied Science, Department of Microbiology, Haripur, Pakistan
| | - S Khalil
- The Islamia University Bahawalpur, Department of Forestry Range and Wildlife Management, Bahawalpur, Pakistan
| | - M Hussain
- The University of Haripur, Faculty of Basic and Applied Science, Department of Forestry and Wildlife Management, Haripur, Pakistan
| | - M Iqbal
- The University of Agriculture Peshawar, Department of Agricultural Chemistry and Biochemistry, Peshawar, Pakistan
| | - K A Khan
- Shandong Normal University, College of Life Sciences, Jinan, China
| | - M Sabir
- The University of Haripur, Faculty of Basic and Applied Science, Department of Microbiology, Haripur, Pakistan
| | - A Akhtar
- The University of Haripur, Department of Psychology, Haripur, Pakistan
| | - G Raza
- University of Baltistan, Department of Biological Sciences, Skardu, Pakistan
| | - A Hussain
- The University of Haripur, Faculty of Basic and Applied Science, Department of Forestry and Wildlife Management, Haripur, Pakistan
| | - U Habiba
- The University of Haripur, Faculty of Basic and Applied Science, Department of Forestry and Wildlife Management, Haripur, Pakistan
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28
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Tzolos E, Williams M, McElhinney P, Lin A, Grodecki K, Guadalupe F, Cadet S, Kwiecinski J, Doris M, Adamson P, Moss A, Alam S, Hunter A, Shah A, Mills N, Pawade T, Wang C, Weir-McCall J, Roditi G, van Beek E, Shaw L, Nicol E, Berman D, Slomka P, Dweck M, Newby D, Dey D. Pericoronary Adipose Tissue Attenuation, Low Attenuation Plaque Burden And 5-year Risk Of Myocardial Infarction. J Cardiovasc Comput Tomogr 2021. [DOI: 10.1016/j.jcct.2021.06.198] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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29
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Williams M, Kwiecinski J, Doris M, McElhinney P, Cadet S, Adamson P, Moss A, Alam S, Hunter A, Shah A, Mills N, Pawade T, Wang C, Weir-McCall J, Roditi G, van Beek E, Shaw L, Nicol E, Berman D, Slomka P, Newby D, Dweck M, Dey D. Sex-specific CT Coronary Plaque Characterization And Risk Of Myocardial Infarction. J Cardiovasc Comput Tomogr 2021. [DOI: 10.1016/j.jcct.2021.06.254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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30
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Hussain M, Khalid F, Noreen U, Bano A, Hussain A, Alam S, Shah S, Sabir M, Habiba U. An ethno-botanical study of indigenous medicinal plants and their usage in rural valleys of Swabi and Hazara region of Pakistan. BRAZ J BIOL 2021; 82:e243811. [PMID: 34076167 DOI: 10.1590/1519-6984.243811] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Accepted: 11/06/2020] [Indexed: 11/21/2022] Open
Abstract
An ethnobotanical study was conducted to document indigenous medicinal plants and their usage from knowledgeable and elderly persons in Razzar and Gadoon valley of Swabi and Allai and Tanawal valley of Hazara region of Pakistan during 2016-2019. Several systematic field visits and questionnaire surveys were carried out in selected sites of the study area to gather relevant information from the local community. Rapid assessment method was adopted for data collection by interviewing the local people having enough knowledge of medicinal plants use for treatment of different ailments. UV (UV) formula was applied to calculate the relative importance of medicinal plant species in each site of the study area. In the present study, 221 medicinal plants belonging to 105 families have been reported through 580 respondents (385 males, 138 females and 57 local health healer) from the Swabi and Hazara region. The main sources of herbal medicines were leaves (21%) followed by fruits (21%), seeds (17%), whole plants (14%), roots (9%), bark (9%), flowers (7%) and gum (2%). Mentha spicata L. and Berberis lycium Royle were reported with highest UV (UV) i.e. 0.92 and 0.68 in Razzar tehsil and Gadoon valley of Swabi, whereas Mentha longifolia L and Geranium wallichianum D were reported with highest UV i.e. (0.65) and (0.88) in Allai and Tanawal valley of Hazara region, respectively. It was concluded that Swabi and Hazara region is rich in medicinal plants species and associated traditional knowledge. Moreover, ethno-medicines have played significant role in the indigenous healthcare system of the study area. However, uprooting the entire plant for ethno-medicine is a big threat to conservation of medicinal plants diversity in the study area.
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Affiliation(s)
- M Hussain
- Department of Forestry and Wildlife Management, University of Haripur, Haripur City, KP, Pakistan
| | - F Khalid
- Department of Forestry and Wildlife Management, University of Haripur, Haripur City, KP, Pakistan
| | - U Noreen
- Department of Environmental Sciences, Abdul Wali Khan University Mardan, KP, Pakistan
| | - A Bano
- Department of Microbiology, University of Haripur, Haripur City, KP, Pakistan
| | - A Hussain
- Department of Forestry and Wildlife Management, University of Haripur, Haripur City, KP, Pakistan
| | - S Alam
- Department of Microbiology, University of Haripur, Haripur City, KP, Pakistan
| | - S Shah
- Department of Forestry and Wildlife Management, University of Haripur, Haripur City, KP, Pakistan
| | - M Sabir
- Department of Microbiology, University of Haripur, Haripur City, KP, Pakistan
| | - U Habiba
- Department of Forestry and Wildlife Management, University of Haripur, Haripur City, KP, Pakistan
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31
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Back DY, Ha SY, Else B, Hanson M, Jones SF, Shin KH, Tatarek A, Wiktor JM, Cicek N, Alam S, Mundy CJ. On the impact of wastewater effluent on phytoplankton in the Arctic coastal zone: A case study in the Kitikmeot Sea of the Canadian Arctic. Sci Total Environ 2021; 764:143861. [PMID: 33383224 DOI: 10.1016/j.scitotenv.2020.143861] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2020] [Revised: 11/09/2020] [Accepted: 11/10/2020] [Indexed: 06/12/2023]
Abstract
We present a case study on the impact of effluent from a wastewater lagoon-wetland system on phytoplankton and local primary production near a coastal Arctic community (Cambridge Bay) over spring to fall 2018. Results are also placed within an interannual and regional context for the surrounding Kitikmeot Sea. We find the shallow, relatively fresh Kitikmeot Sea is one of the most nutrient-deplete regions of the Arctic Ocean with NO3- + NO2- concentrations below the surface mixed layer rarely exceeding 2 μmol L-1 and a N:Si:P ratio of 1:6:1. The fjordal-type bathymetry of the main study site and a persistent pycnocline below the bay's exit sill led to slightly elevated N:Si:P of 3:11:1 through trapping of wastewater-sourced N at depth via sinking and remineralization of primary production. Total production in Cambridge Bay over the 3-month open water period was 12.1 g C m-2 with 70% of this production occurring during the 1-month discharge of wastewater into the system. Local primary production responded rapidly to high NO3- + NO2-, NH4+ and PON concentrations provided by wastewater effluent, comprising up to 20% of the production during the discharge period. Remaining production was mostly explained by the deep nutrient pool in the bay, which was only accessed towards the end of the discharge period as the diatom-dominated deep chlorophyll maximum settled below the pycnocline. Although not yet eutrophic, caution is raised at the rapid response of the marine system to wastewater release with a strong recommendation to develop a research and monitoring plan for the bay.
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Affiliation(s)
- Dong-Young Back
- Centre for Earth Observation Science, University of Manitoba, Winnipeg, MB R3T 2N2, Canada.
| | - Sun-Yong Ha
- Division of Polar Ocean Science, Korea Polar Research Institute, Incheon 21990, Republic of Korea
| | - Brent Else
- Department of Geography, University of Calgary, Calgary, AB T2N 1N4, Canada
| | - Mark Hanson
- Department of Environment and Geography, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
| | - Samantha F Jones
- Department of Geography, University of Calgary, Calgary, AB T2N 1N4, Canada
| | - Kyung-Hoon Shin
- Department of Marine Sciences and Convergent Technology, Hanyang University, Ansan, Gyeonggi-do 15588, Republic of Korea
| | - Agnieszka Tatarek
- Department of Ecology, Institute of Oceanology Polish Academy of Sciences, Powstańców Warszawy 55, 81-712 Sopot, Poland
| | - Józef M Wiktor
- Department of Ecology, Institute of Oceanology Polish Academy of Sciences, Powstańców Warszawy 55, 81-712 Sopot, Poland
| | - Nazim Cicek
- Department of Biosystems Engineering, University of Manitoba, Winnipeg, MB R3T 5V6, Canada
| | - Shah Alam
- Department of Community and Government Services, Government of Nunavut, Cambridge Bay, NU X0B 0C0, Canada
| | - C J Mundy
- Centre for Earth Observation Science, University of Manitoba, Winnipeg, MB R3T 2N2, Canada
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Alam S, Cannon C, de Lemos J, Ballantyne C, Rosenson R, Mues K, Gao Q, Bhatt D, Kosiborod M. Two-year Results of the Getting to an imprOved Understanding of Low-Density Lipoprotein Cholesterol and Dyslipidaemia Management (GOULD) Registry of Patients With AtheroSclerotic CardioVascular Disease (ASCVD). Heart Lung Circ 2021. [DOI: 10.1016/j.hlc.2021.06.343] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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33
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Sakib K, Haydar A, Ali I, Paul D, Alam S. Regional scale screening of selected regions of Bangladesh to identify potential sites for the disposal of low and intermediate level radioactive waste. Nucl Technol Radiat Prot 2021. [DOI: 10.2298/ntrp210219010s] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022] Open
Abstract
Disposal of radioactive wastes has emerged as a vital issue for Bangladesh as the country is actively working to have a nuclear power plant operating in the country by 2023-2024. The current study aims to find potential sites for a near-surface disposal facility using a geographic information system software and multi-criteria analysis method. Previously six regions (Region-1 to Region-6) were identified upon performing continental scale screening of the whole territory of Bangladesh. In the current study, regional scale screening has been performed of Region-1 and Region-2 using five criteria divided into fifteen sub-criteria: earthquakes, wind speed, rainfall, cultivated-vegetated land, forests, buildings-facilitie-built up areas (area), buildings-facilities-industries-institutions (Point), population density, medium-broad road and railway, narrow road, monument, power line, ground water table, surface water body, and lastly flooding were used in the analysis. The suitability map and relative importance weighting of these sub-criteria were determined by using the geographic information system and multi-criteria analysis method. The overlay analysis was performed of suitability maps of each sub-criterion and found the final suitability map of Region-1 and Region-2. These suitability maps were divided into six categories: the excluded area, most suitable, suitable, moderately suitable, unsuitable, and completely unsuitable. Nineteen potential sites with a maximum and minimum area of 7.90 km2 and 1.15 km2 were identified from these most suitable and suitable areas. Detailed field investigation and site characterization are needed to be performed on selected potential sites to choose a final disposal site for the low and intermediate levels of radio-active waste.
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Affiliation(s)
- Khondokar Sakib
- Department of Physics, Mawlana Bhashani Science and Technology University, Tangail, Bangladesh + Department of Physics, Shahjalal University of Science and Technology, Sylhet, Bangladesh
| | - Abu Haydar
- Health Physics and Radioactive Waste Management Unit, Institute of Nuclear Science and Technology, Atomic Energy Research Establishment, Bangladesh Atomic Energy Commission, Savar, Bangladesh
| | - Idris Ali
- Health Physics and Radioactive Waste Management Unit, Institute of Nuclear Science and Technology, Atomic Energy Research Establishment, Bangladesh Atomic Energy Commission, Savar, Bangladesh
| | - Debasish Paul
- Health Physics and Radioactive Waste Management Unit, Institute of Nuclear Science and Technology, Atomic Energy Research Establishment, Bangladesh Atomic Energy Commission, Savar, Bangladesh
| | - Shah Alam
- Department of Physics, Shahjalal University of Science and Technology, Sylhet, Bangladesh
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34
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Qadeer A, Khan ME, Alam S. Estimation of Solar Radiation on Tilted Surface by Using Regression Analysis at Different Locations in India. DGAEJ 2020. [DOI: 10.13052/dgaej2156-3306.3511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/01/2023]
Abstract
This study is to find the regression model for estimation of monthly meanhourly global solar radiation on tilted surface at different locations of India.This study is quite precious due to lack of solar radiation data availability onthe tilted surface. Firstly, we have selected some locations having differentclimatic conditions such as New Delhi, Mumbai, Kolkata, Lucknow andJaipur to find the solar radiation on tilted surface using Liu and Jordan model,HDKR model and Perez model. The mean values of these models are plottedalong with the daytime. Based on regression techniques, four empiricalmodels are developed which are tested to compute the solar radiation ontilted surface for three new stations Ahmadabad, Bangalore and Chennai.The estimated solar radiation by these four developed models are comparedwith the estimated values using existing models Lie & Jordan, HDKR andPerez based on mean bias error (MBE) and root mean square error (RMSE).It has been found that developed Model-3 has minimum error and the valuesestimated this model is comparable to existing models. The maximum values of RMSE in Model-3 in tested stations are 2.01% with Liu and Jordan, 2.63%with HDKR and 2.10% with Perez. Similarly, maximum values of MBE are−1.79% with Liu and Jordan, −2.27% with HDKR and −1.89% with Perez.Now the Model-3 finally selected to determine the solar radiation on Bhopal,Bhubneshwar, Dehradun, Guwahati and Trivendrum (Thiruvananthapuram).
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Meyers C, Kass R, Goldenberg D, Milici J, Alam S, Robison R. Ethanol and isopropanol inactivation of human coronavirus on hard surfaces. J Hosp Infect 2020; 107:45-49. [PMID: 32991941 PMCID: PMC7521917 DOI: 10.1016/j.jhin.2020.09.026] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Revised: 09/21/2020] [Accepted: 09/22/2020] [Indexed: 12/21/2022]
Abstract
BACKGROUND The coronavirus disease 2019 pandemic has greatly increased the frequency of disinfecting surfaces in public places, causing a strain on the ability to obtain disinfectant solutions. An alternative is to use plain alcohols (EtOH and IPA) or sodium hypochlorite (SH). AIM To determine the efficacy of various concentrations of EtOH, IPA and SH on a human coronavirus (HCoV) dried on to surfaces using short contact times. METHODS High concentrations of infectious HCoV were dried on to porcelain and ceramic tiles, then treated with various concentrations of the alcohols for contact times of 15 s, 30 s and 1 min. Three concentrations of SH were also tested. Reductions in titres were measured using the tissue culture infectious dose 50 assay. FINDINGS Concentrations of EtOH and IPA from 62% to 80% were very efficient at inactivating high concentrations of HCoV dried on to tile surfaces, even with a 15-s contact time. Concentrations of 95% dehydrated the virus, allowing infectious virus to survive. The dilutions of SH recommended by the Centers for Disease Control and Prevention (1/10 and 1/50) were efficient at inactivating high concentrations of HCoV dried on to tile surfaces, whereas a 1/100 dilution had substantially lower activity. CONCLUSIONS Multiple concentrations of EtOH, IPA and SH efficiently inactivated infectious HCoV on hard surfaces, typical of those found in public places. Often no remaining infectious HCoV could be detected.
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Affiliation(s)
- C Meyers
- Department of Microbiology and Immunology, Pennsylvania State College of Medicine, Hershey, PA, USA.
| | - R Kass
- Department of Surgical Oncology, Pennsylvania State College of Medicine, Hershey, PA, USA
| | - D Goldenberg
- Department of Otolaryngology, Pennsylvania State College of Medicine, Hershey, PA, USA
| | - J Milici
- Department of Microbiology and Immunology, Pennsylvania State College of Medicine, Hershey, PA, USA
| | - S Alam
- Department of Microbiology and Immunology, Pennsylvania State College of Medicine, Hershey, PA, USA
| | - R Robison
- Department of Microbiology and Molecular Biology, Brigham Young University, Provo, UT, USA
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Hoque A, Alam S, Bari M, Matin M, Bhowmick R, Chowdhury A, Rahim I, Thakur A, Ahmed T. 1451P Comparative response evaluation of cisplatin-capecitabine with cisplatin-5-fluorouracil in advanced gastric carcinoma: A quasi-experimental study. Ann Oncol 2020. [DOI: 10.1016/j.annonc.2020.08.1957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022] Open
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Hagen-Euteneuer N, Alam S, Rindsfuesser H, Meyer Zu Heringdorf D, van Echten-Deckert G. S1P-lyase deficiency uncouples ganglioside formation - Potential contribution to tumorigenic capacity. Biochim Biophys Acta Mol Cell Biol Lipids 2020; 1865:158708. [PMID: 32283310 DOI: 10.1016/j.bbalip.2020.158708] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2019] [Revised: 03/13/2020] [Accepted: 03/31/2020] [Indexed: 12/01/2022]
Abstract
Sphingosine-1-phosphate (S1P) is not only a catabolic intermediate of all sphingolipids but also an evolutionary conserved bioactive lipid with critical functions in cell survival, differentiation, and migration as well as in immunity and angiogenesis. S1P-lyase (SGPL1) irreversibly cleaves S1P in the final step of sphingolipid catabolism. As sphingoid bases and their 1-phosphates are not only metabolic intermediates but also highly bioactive lipids that modulate a wide range of physiological processes, it would be predicted that their elevation might induce adjustments in other facets of sphingolipid metabolism and/or alter cell behavior. We actually found in a previous study that in terminally differentiated neurons SGPL1 deficiency increases sphingolipid formation via recycling at the expense of de novo synthesis. We now investigated whether and how SGPL1 deficiency affects the metabolism of (glyco)sphingolipids in mouse embryonic fibroblasts (MEFs). According to our previous experiments in neurons, we found a strong accumulation of S1P in SGPL1-deficient MEFs. Surprisingly, a completely different situation arose as we analyzed sphingolipid metabolism in this non-differentiated cell type. The production of biosynthetic precursors of complex glycosphingolipids including ceramide, glucosylceramide and also ganglioside GM3 via de novo synthesis and recycling pathway was substantially increased whereas the amount of more complex gangliosides dropped significantly.
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Affiliation(s)
| | - Shah Alam
- LIMES Institute Membrane Biology and Lipid Biochemistry, University Bonn, Germany
| | - Hannah Rindsfuesser
- LIMES Institute Membrane Biology and Lipid Biochemistry, University Bonn, Germany
| | - Dagmar Meyer Zu Heringdorf
- Institut für Allgemeine Pharmakologie und Toxikologie, Klinikum der Goethe-Universität, Frankfurt am Main, Germany
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Uddin MJ, Rahman AF, Rahman S, Momenuzzaman NM, Rahman A, Majumder AS, Mohibullah AM, Chowdhury AH, Malik FN, Ahsan SA, Mohsin K, Haq MM, Chowdhury AW, Sohrabuzzaman AM, Rahman M, Chakraborty B, Rahman R, Khan SR, Khan KN, Reza AM, Hussain KS, Rashid M, Choudhury AK, Karmakar KK, Ali Z, Alam N, Rahman Z, Kabir CS, Banik D, Dutta A, Badiuzzaman M, Islam AW, Sium AH, Hossain MD, Ahmed N, Jahan J, Islam MS, Arefin MM, Cader FA, Banerjee SK, Hoque H, Shofiuddin M, Selim A, Das PK, Ahmed M, Dutto B, Alam S, Paul GK, Paul SK, Azam MG. National Clinical Guidance for the Management of Cardiovascular Intervention in the COVID-19 Pandemic: From Bangladesh Society of Cardiovascular Interventions (BSCI). Mymensingh Med J 2020; 29:488-494. [PMID: 32506111] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Since the first recorded case of SARS-CoV-2 in Bangladesh on 8th March 2020, COVID-19 has spread widely through different regions of the country, resulting in a necessity to re-evaluate the delivery of cardiovascular services, particularly procedures pertaining to interventional cardiology in resource-limited settings. Given its robust capacity for human-to-human transmission and potential of being a nosocomial source of infection, the disease has specific implications on healthcare systems and health care professionals faced with performing essential cardiac procedures in patients with a suspected or confirmed diagnosis of COVID-19. The limited resources in terms of cardiac catheterization laboratories that can be designated to treat only COVID positive patients are further compounded by the additional challenges of unavailability of widespread rapid testing on-site at tertiary cardiac hospitals in Bangladesh. This document prepared for our nation by the Bangladesh Society of Cardiovascular Interventions (BSCI) is intended to serve as a clinical practice guideline for cardiovascular health care professionals, with a focus on modifying standard practice of care during the COVID-19 pandemic, in order to ensure continuation of adequate and timely treatment of cardiovascular emergencies avoiding hospital-based transmission of SARS-COV-2 among healthcare professionals and the patients. This is an evolving document based on currently available global data and is tailored to healthcare systems in Bangladesh with particular focus on, but not limited to, invasive cardiology facilities (cardiac catheterization, electrophysiology & pacing labs). This guideline is limited to the provision of cardiovascular care, and it is expected that specific targeted pharmaco-therapeutics against SARS-CoV-2 be prescribed as stipulated by the National Guidelines on Clinical Management of Corona virus Disease 2019 (COVID-19) published by the Director General of Health Services, Ministry of Health and Family Welfare of Bangladesh.
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Affiliation(s)
- M J Uddin
- Professor MG Azam, National Institute of Cardiovascular Diseases, Dhaka, Bangladesh; E-mail:
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Younis M, Muhammad A, Alam S, Jalal A. Sulphur doses and application times on yield and oil quality of canola grown in calcareous soil. Grasas y Aceites 2020. [DOI: 10.3989/gya.1176182] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Pakistan has been constantly deficient in its oil seed production and it is very difficult to meet the edible oil requirement of its ever-increasing population. A field experiment was conducted at the Agronomy Research Farm, The University of Agriculture Peshawar, Northern Pakistan during winter (2013–14). Five sulphur levels (15, 30, 45, 60 and 75 kg·ha-1) and times of application (at seedling, bolting and flowering stages) were used for the canola variety Abasin-95. The experiment was laid out in a randomized complete block design replicated four times on a 5 m × 3.2 m plot size. The results showed that the sulphur-applied plots gave the highest seed yield, biological yield, glucosinolate, erucic acid, oil content, protein content, oleic acid and linoleic acid compared to the control plots. Sulphur applied at the rate of 60 kg·ha-1 and applied at the bolting stage increased seed yield, biological yield, oil content, and protein content.
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Alam S, Kale S. Determining the normal effective diameter of thoracic aorta in pediatric population of India. Indian J Radiol Imaging 2020; 30:170-176. [PMID: 33100684 PMCID: PMC7546306 DOI: 10.4103/ijri.ijri_2_20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/01/2020] [Revised: 03/12/2020] [Accepted: 03/14/2020] [Indexed: 12/04/2022] Open
Abstract
Background: It is imperative to establish normative ranges of aortic diameter to diagnose various aortic pathologies. There have been very few studies establishing the normal aortic diameter on cross-sectional imaging, and none pertaining to the Indian pediatric population. The objective of this study was, therefore, to establish the normal effective diameter of thoracic aorta at multiple levels using computed tomographic data, calculate z-scores, and plot reference curves. Subjects and Methods: The effective thoracic aorta diameters (average of anteroposterior and lateral diameters) were measured at predefined levels (aortic root, ascending aorta at the level of right pulmonary artery, aortic arch, proximal descending aorta, and aorta at the level of diaphragmatic hiatus) on double-oblique reconstructed computed tomography (CT) images perpendicular to the direction of the vessel. Multiple functional forms relating the effective diameter to subjects’ age were evaluated with least square regression methods, and further R2 was used to ascertain the best model. Age-based formulas to derive normal aorta diameters and mean squared errors (MSEs) were established. Results: Two hundred and seven contrast-enhanced CT (CECT) thorax studies of children without known cardiovascular disease were studied. The polynomial regression model relating the effective diameter that included linear, quadratic, and cubic age terms as independent variables were found to the best statistical model. The z scores were calculated, and normative curves were plotted. Conclusions: We have established normative effective diameters of the thoracic aorta at multiple levels in Indian children of different age groups. Measurements outside of the normal ranges are indicators of ectasia, aneurysm, hypoplasia, or stenosis.
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Islam KMT, Alam S, Amin R, Haque M, Nath HD, Hossain M, Khan AH, Hossain MATM, Barua KK. Incidence of central diabetes insipid us among the patients undergoing pituitary tumor surgery 06 through trans-sphenoidal approach. J Surg Sci 2019. [DOI: 10.3329/jss.v21i1.43831] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
Abstract
Background: Diabetes insipidus (DI) is a common complication following pituitary surgery. Thiscondition can be transient or permanent and the signs and symptoms of this disorder can bemimicked by the normal postoperative course.
Objective: This study was carried out to find out the incidence of central diabetes insipidus (DI)among the patients undergoing pituitary tumor surgery through trans-sphenoidal approach eitherendoscopic or microsurgical for the first time.Study Design: Cross sectional observational study
Methods: Patients with central (Neurogenic) diabetes insipidus prior to surgery, co-morbiditieslike diabetes mellitus, kidney diseases, electrolyte imbalance, recurrent cases were excludedfrom this study. Patients were followed up to 7th postoperative day by recording and analyzingfindings of postoperative serum electrolytes, urinary specific gravity, hourly urinary volume forestablishing diabetes insipid us.
Results: 76.9% of patients developed diabetes insipidus and 70.0% of patients did not developdiabetes insipid us those who underwent pituitary tumour surgery by trans-sphenoidal endoscopicapproach; 23.1% of patients developed diabetes insipid us and 30.0% of patients did not developdiabetes insipid us those who underwent pituitary tumour surgery by trans-sphenoidal mlcrosurgicalapproach.
Conclusion: Prediction of DI help us in pre-operative counseling and post-operative managementof the patients as well as to reduce complications related morbidity after pituitary tumor surgery.
Journal of Surgical Sciences (2017) Vol. 21 (1) :6-10
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Zahoor M, Ullah A, Alam S. Removal of Enrofloxacin from Water through Magnetic Nanocomposites Prepared from Pineapple Waste Biomass. Surf Engin Appl Electrochem 2019. [DOI: 10.3103/s1068375519050156] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
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Alam S, Yadav RS, Pal A, Purshottam SK, Chaudhari BP, Das M, Ansari KM. Corrigendum to "Dietary administration of Nexrutine inhibits rat liver tumorigenesis and induces apoptotic cell death in human hepatocellular carcinoma cells". [Toxicol. Rep. 2 (2014) (November) 1-11]. Toxicol Rep 2019; 6:1314-1315. [PMID: 31993332 DOI: 10.1016/j.toxrep.2019.09.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022] Open
Abstract
[This corrects the article DOI: 10.1016/j.toxrep.2014.11.006.].
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Affiliation(s)
- S Alam
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Mahatma Gandhi Marg, P.O. Box#80, Lucknow, 226001, India
| | - R S Yadav
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Mahatma Gandhi Marg, P.O. Box#80, Lucknow, 226001, India
| | - A Pal
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Mahatma Gandhi Marg, P.O. Box#80, Lucknow, 226001, India
| | - S K Purshottam
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Mahatma Gandhi Marg, P.O. Box#80, Lucknow, 226001, India
| | - B P Chaudhari
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Mahatma Gandhi Marg, P.O. Box#80, Lucknow, 226001, India
| | - M Das
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Mahatma Gandhi Marg, P.O. Box#80, Lucknow, 226001, India
| | - K M Ansari
- Food, Drug and Chemical Toxicology Group, CSIR-Indian Institute of Toxicology Research (CSIR-IITR), Mahatma Gandhi Marg, P.O. Box#80, Lucknow, 226001, India
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Bhatt M, Soneja M, Fazal F, Vyas S, Kumar P, Jorwal P, Raj U, Sachdev J, Singh G, Xess I, Alam S, Biswas A. Two cases of Osteoarticular Mucor menace: A diagnostic and management conundrum. Drug Discov Ther 2019; 12:374-378. [PMID: 30674773 DOI: 10.5582/ddt.2018.01064] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Mucormycosis is an uncommon aggressive fungal infection usually seen in immunocompromised hosts or patients with burns and trauma. The common presentations include rhino-orbital-cerebral and pulmonary involvement. Osteoarticular involvement is a rare presentation of this disease. We present two cases of osteoarticular mucormycosis of pelvis and long bones of the lower limb, one in a patient with burn injury and other one in a patient with chronic granulomatous disease, hitherto a rarely reported association. Delayed diagnosis in a setting where tuberculosis is a common cause of chronic osteomyelitis, challenges in medical and surgical management of these patients are discussed in this report.
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Affiliation(s)
- Manasvini Bhatt
- Department of Medicine, All India Institute of Medical Sciences
| | - Manish Soneja
- Department of Medicine, All India Institute of Medical Sciences
| | - Farhan Fazal
- Department of Medicine, All India Institute of Medical Sciences
| | - Surabhi Vyas
- Department of Radiodiagnosis, All India Institute of Medical Sciences
| | - Prabhat Kumar
- Department of Medicine, All India Institute of Medical Sciences
| | - Pankaj Jorwal
- Department of Medicine, All India Institute of Medical Sciences
| | - Upendra Raj
- Department of Medicine, All India Institute of Medical Sciences
| | - Janya Sachdev
- Department of Microbiology, All India Institute of Medical Sciences
| | - Gagandeep Singh
- Department of Microbiology, All India Institute of Medical Sciences
| | - Immaculata Xess
- Department of Microbiology, All India Institute of Medical Sciences
| | - Shah Alam
- Department of Orthopedics, All India Institute of Medical Sciences
| | - Ashutosh Biswas
- Department of Medicine, All India Institute of Medical Sciences
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Karunakaran I, Alam S, Jayagopi S, Frohberger SJ, Hansen JN, Kuehlwein J, Hölbling BV, Schumak B, Hübner MP, Gräler MH, Halle A, van Echten-Deckert G. Neural sphingosine 1-phosphate accumulation activates microglia and links impaired autophagy and inflammation. Glia 2019; 67:1859-1872. [PMID: 31231866 DOI: 10.1002/glia.23663] [Citation(s) in RCA: 55] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2018] [Revised: 06/04/2019] [Accepted: 06/05/2019] [Indexed: 02/06/2023]
Abstract
Microglia mediated responses to neuronal damage in the form of neuroinflammation is a common thread propagating neuropathology. In this study, we investigated the microglial alterations occurring as a result of sphingosine 1-phosphate (S1P) accumulation in neural cells. We evidenced increased microglial activation in the brains of neural S1P-lyase (SGPL1) ablated mice (SGPL1fl/fl/Nes ) as shown by an activated and deramified morphology and increased activation markers on microglia. In addition, an increase of pro-inflammatory cytokines in sorted and primary cultured microglia generated from SGPL1 deficient mice was noticed. Further, we assessed autophagy, one of the major mechanisms in the brain that keeps inflammation in check. Indeed, microglial inflammation was accompanied by defective microglial autophagy in SGPL1 ablated mice. Rescuing autophagy by treatment with rapamycin was sufficient to decrease interleukin 6 (IL-6) but not tumor necrosis factor (TNF) secretion in cultured microglia. Rapamycin mediated decrease of IL-6 secretion suggests a particular mechanistic target of rapamycin (mTOR)-IL-6 link and appeared to be microglia specific. Using pharmacological inhibitors of the major receptors of S1P expressed in the microglia, we identified S1P receptor 2 (S1PR2) as the mediator of both impaired autophagy and proinflammatory effects. In line with these results, the addition of exogenous S1P to BV2 microglial cells showed similar effects as those observed in the genetic knock out of SGPL1 in the neural cells. In summary, we show a novel role of the S1P-S1PR2 axis in the microglia of mice with neural-targeted SGPL1 ablation and in BV2 microglial cell line exogenously treated with S1P.
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Affiliation(s)
- Indulekha Karunakaran
- LIMES Institute, Membrane Biology & Lipid Biochemistry, University of Bonn, Germany.,Institute for Medical Microbiology, Immunology and Parasitology, University Hospital of Bonn, Bonn, Germany
| | - Shah Alam
- LIMES Institute, Membrane Biology & Lipid Biochemistry, University of Bonn, Germany
| | - Surendar Jayagopi
- Institute for Medical Microbiology, Immunology and Parasitology, University Hospital of Bonn, Bonn, Germany
| | - Stefan J Frohberger
- Institute for Medical Microbiology, Immunology and Parasitology, University Hospital of Bonn, Bonn, Germany
| | - Jan N Hansen
- German Center for Neurodegenerative Diseases, DZNE, Bonn, Germany and Center of Advanced European Studies and Research, Bonn, Germany
| | - Janina Kuehlwein
- Institute for Medical Microbiology, Immunology and Parasitology, University Hospital of Bonn, Bonn, Germany
| | - Benedikt V Hölbling
- German Center for Neurodegenerative Diseases, DZNE, Bonn, Germany and Center of Advanced European Studies and Research, Bonn, Germany
| | - Beatrix Schumak
- Institute for Medical Microbiology, Immunology and Parasitology, University Hospital of Bonn, Bonn, Germany
| | - Marc P Hübner
- Institute for Medical Microbiology, Immunology and Parasitology, University Hospital of Bonn, Bonn, Germany
| | - Markus H Gräler
- Department of Anaesthesiology and Intensive Care Medicine, Center for Sepsis Control and Care (CSCC), and the Center for Molecular Biomedicine (CMB), Jena University Hospital, Jena, Germany
| | - Annett Halle
- German Center for Neurodegenerative Diseases, DZNE, Bonn, Germany and Center of Advanced European Studies and Research, Bonn, Germany
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van Echten-Deckert G, Alam S. Sphingolipid metabolism - an ambiguous regulator of autophagy in the brain. Biol Chem 2019; 399:837-850. [PMID: 29908127 DOI: 10.1515/hsz-2018-0237] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2018] [Accepted: 05/25/2018] [Indexed: 01/12/2023]
Abstract
In mammals, the brain exhibits the highest lipid content in the body next to adipose tissue. Complex sphingolipids are characteristic compounds of neuronal membranes. Vital neural functions including information flux and transduction occur along these membranes. It is therefore not surprising that neuronal function and survival is dependent on the metabolism of these lipids. Autophagy is a critical factor for the survival of post-mitotic neurons. On the one hand, it fulfils homeostatic and waste-recycling functions and on the other hand, it constitutes an effective strategy to eliminate harmful proteins that cause neuronal death. A growing number of experimental data indicate that several sphingolipids as well as enzymes catalyzing their metabolic transformations efficiently but very differently affect neuronal autophagy and hence survival. This review attempts to elucidate the roles and mechanisms of sphingolipid metabolism with regard to the regulation of autophagy and its consequences for brain physiology and pathology.
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Affiliation(s)
- Gerhild van Echten-Deckert
- LIMES Institute, Unit Membrane Biology and Lipid Biochemistry, Kekulé-Institute of the University Bonn, Gerhard-Domagk-Str. 1, D-53121 Bonn, Germany
| | - Shah Alam
- LIMES Institute, Unit Membrane Biology and Lipid Biochemistry, Kekulé-Institute of the University Bonn, Gerhard-Domagk-Str. 1, D-53121 Bonn, Germany
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Rehman N, Alam S, Mian I, Ullah H. Environmental friendly method for the extraction of cellulose from Triflolium resopinatum and its characterization. B CHEM SOC ETHIOPIA 2019. [DOI: 10.4314/bcse.v33i1.6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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Majumdar K, Alam S. Regioselective synthesis of 7-acetyl-11c-methyl-4b,5,7,11c-tetrahydro[1]benzofuro[2′,3′:4,5]thiopyrano[2,3-b]indoles by sequential Claisen rearrangement of 2-(4′-aryloxybut-2′-ynylthio)-1-acetylindoles. Journal of Chemical Research 2019. [DOI: 10.3184/030823406777411007] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Hitherto unreported indole-annulated pentacyclic heterocycles containing oxygen, nitrogen and sulfur have been synthesised by thermal Claisen rearrangement followed by Lewis acid catalysed Claisen rearrangement. 9-Acetyl-4-aryloxymethyl-2,9-dihydrothiopyrano[2,3- b]indoles are regioselectively synthesised in 80–85 % yield by thermal rearrangement of 2-(4′-aryloxybut-2′-ynylthio)-1-acetylindoles. A second, Lewis acid catalysed, rearrangement gave 7-acetyl-11c-methyl-4b,5,7,11c-tetrahydro[1]benzofuro[2′,3′: 4,5]thiopyrano[2,3- b]indoles in yields of 85–90 %. The thermal Claisen rearrangement in refluxing N,N-diethylaniline for 3 h gave the same products in lower yield (50–54 %).
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Affiliation(s)
- K.C. Majumdar
- Department of Chemistry, University of Kalyani, Kalyani 741 235, W. B., India
| | - S. Alam
- Department of Chemistry, University of Kalyani, Kalyani 741 235, W. B., India
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Saha MK, Islam SS, Alam S, Rahman MW, Kamruzzaman M, Paul J, Rahman MM, Alamgir MK. Evaluation of Fixation for Distal Humeral Diaphyseal Fracture by Locking Compression Plate. Mymensingh Med J 2019; 28:60-69. [PMID: 30755552] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
Treatment of extra-articular distal humeral shaft fractures with plating techniques is often difficult. The recent development of LCP has improved the surgical treatment of fractures by overcoming the few drawbacks of older fixators. The aim of this prospective observational study was to assess the effectiveness of osteosynthesis of extra-articular diaphyseal fractures of the distal third of the humerus using a single locking compression plate (LCP) and was conducted from July 2016 to June 2018 at the National Institute of Traumatology and Orthopedic Rehabilitation (NITOR), Dhaka, Bangladesh. Thirty (30) patients with closed fracture distal 3rd extra-articular humeral shaft fractures were treated by open reduction and internal fixation by locking compression plate. Two cases were excluded from the evaluation of final outcome due to their discontinued follow up. Detailed clinical conditions of all patients, technical difficulty with the implant, postoperative hospital stay period were recorded. Patients were followed up at 2nd week, 4th week, then 4 weekly upto 6 months. The patients were evaluated clinically and radiologically for outcomes. The progresses of healing as well as occurrence of complications were recorded. The range of motion of the shoulder and elbow were evaluated according to the criteria by Rommens grading. Functional evaluation was made according to the criteria by Modified Constant and Murley Scoring System. Union was achieved in all the patients after a mean of 15 weeks (range 12-20 weeks). There were no complications like deep infection, nonunion, malunion, implant failure, or nerve injury occurs in any of the patients. Two patients had transient radial nerve palsy. Two patients developed superficial infection. All patients were relieved pain postoperatively. Functional outcome were excellent in 10 patients, good in 15 patients which constituted 89% satisfactory results. The study has shown that the LCP is an effective, dependable solution for the management of distal third diaphyseal fractures of the humerus.
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Affiliation(s)
- M K Saha
- Dr Malay Kumar Saha, Associate Professor, Department of Orthopaedics, Mymensingh Medical College (MMC), Mymensingh, Bangladesh; E-mail:
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Jacob F, Alam S, Liang CY, Kohler R, Nonantz M, Everest-Dass A, Huang YL, Fedier A, Schötzau A, Nunez Lopez M, Packer N, Lengerke C, Heinzelmann-Schwarz V. A4GALT-related glycosphingolipids play a pivotal role in the reversible transition of mesenchymal and epithelial ovarian cancer cells and hence are important regulators of metastasis. Geburtshilfe Frauenheilkd 2018. [DOI: 10.1055/s-0038-1671044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022] Open
Affiliation(s)
- F Jacob
- University Hospital Basel, Department of Biomedicine, Glyco-Oncology, Ovarian Cancer Research, Basel, Schweiz
| | - S Alam
- University Hospital Basel, Department of Biomedicine, Glyco-Oncology, Ovarian Cancer Research, Basel, Schweiz
| | - CY Liang
- University Hospital Basel, Department of Biomedicine, Ovarian Cancer Research, Basel, Schweiz
| | - R Kohler
- University Hospital Basel, Department of Biomedicine, Ovarian Cancer Research, Basel, Schweiz
| | - M Nonantz
- University Hospital Basel, Department of Biomedicine, Stem Cell and Hematopoiesis, Basel, Schweiz
| | - A Everest-Dass
- Griffith University, Institute for Glycomics, Gold Coast, Australien
| | - YL Huang
- University Hospital Basel, Department of Biomedicine, Ovarian Cancer Research, Basel, Schweiz
| | - A Fedier
- University Hospital Basel, Department of Biomedicine, Ovarian Cancer Research, Basel, Schweiz
| | - A Schötzau
- University Hospital Basel, Department of Biomedicine, Ovarian Cancer Research, Basel, Schweiz
| | - M Nunez Lopez
- University Hospital Basel, Department of Biomedicine, Ovarian Cancer Research, Basel, Schweiz
| | - N Packer
- Macquarie University, Department of Chemistry and Biomolecular Sciences, North Ride, Australien
| | - C Lengerke
- University Hospital Basel, Department of Biomedicine, Stem Cell and Hematopoiesis, Basel, Schweiz
| | - V Heinzelmann-Schwarz
- University Hospital Basel, Department of Biomedicine, Ovarian Cancer Research, Basel, Schweiz
- University Hospital Basel, Hospital for Women, Department of Gynecology and Gynecological Oncology, Basel, Schweiz
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