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Martin TE, Bennett GC, Fairbairn A, Mooers AO. Towards a standardized framework for managing lost species. Anim Conserv 2023. [DOI: 10.1111/acv.12865] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/24/2023]
Affiliation(s)
- T. E. Martin
- School of Natural Sciences, College of Environmental Sciences and Engineering, Bangor University Bangor UK
- Biodiversity Inventory for Conservation NPO (BINCO) Glabbeek Belgium
- Wild Planet Trust Paignton Zoo Paignton UK
| | - G. C. Bennett
- Department of Biological Sciences Simon Fraser University Burnaby British Columbia Canada
| | - A. Fairbairn
- Terrestrial Ecology Research Group, Department for Life Science Systems, School of Life Science Technical University of Munich Freising Germany
| | - A. O. Mooers
- Department of Biological Sciences Simon Fraser University Burnaby British Columbia Canada
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Affiliation(s)
- T. E. Martin
- Operation Wallacea Ltd Spilsby UK
- Biodiversity Inventory for Conservation NPO (BINCO) Glabbeek Belgium
- Wild Planet Trust, Paignton Zoo Paignton UK
| | - G. C. Bennett
- Department of Biological Sciences Simon Fraser University Burnaby BC Canada
| | - A. Fairbairn
- Terrestrial Ecology Research Group, Department for Life Science Systems, School of Life Science Technical University of Munich Freising Germany
| | - A. O. Mooers
- Department of Biological Sciences Simon Fraser University Burnaby BC Canada
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Martin TE, Biega A, Greenberg D, Mooers AO. Asking the right questions about the role of zoos in amphibian conservation. Anim Conserv 2017. [DOI: 10.1111/acv.12351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- T. E. Martin
- 1 Chiddenbrook Cotts; Threshers; Crediton Devon UK
| | - A. Biega
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
| | - D. Greenberg
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
| | - A. O. Mooers
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
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Biega A, Greenberg DA, Mooers AO, Jones OR, Martin TE. Global representation of threatened amphibiansex situis bolstered by non-traditional institutions, but gaps remain. Anim Conserv 2016. [DOI: 10.1111/acv.12297] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
- A. Biega
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
| | - D. A. Greenberg
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
| | - A. O. Mooers
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
| | - O. R. Jones
- Department of Biology & Max-Planck Odense Center on the Biodemography of Aging; University of Southern Denmark; Odense Denmark
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Affiliation(s)
| | - H. Lurbiecki
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby British Columbia Canada
| | - A. O. Mooers
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby British Columbia Canada
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Martin TE, Lurbiecki H, Joy JB, Mooers AO. Mammal and bird species held in zoos are less endemic and less threatened than their close relatives not held in zoos. Anim Conserv 2013. [DOI: 10.1111/acv.12069] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Affiliation(s)
| | - H. Lurbiecki
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
| | - J. B. Joy
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
| | - A. O. Mooers
- Department of Biological Sciences and IRMACS; Simon Fraser University; Burnaby BC Canada
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Abstract
A long-standing debate in ecology centers on identifying the processes that determine which species coexist in a local community. Partitioning of resources, where species differ in resource use, is often thought to reflect the primary role of competition in determining coexistence of species. However, in theory predation can favor similar patterns. This theory premises that predators increase their search intensity with increasing density of prey. One set of experiments reported here supports this premise based on predators that search for bird nests. A second set of experiments documents that predation rates are lower when nest sites are partitioned among different sites than when the same number of nests are placed in similar sites. Moreover, predation rates on experimental nests are more similar to rates on real nests when experimental nests are partitioned among different sites. These results provide support for a hypothesis that nest predation is a process that can favor coexistence of bird species that partition resources, where nest sites are the resources.
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Affiliation(s)
- T E Martin
- Department of Zoology, Arizona State University, Tempe, AZ 85287-1501
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Vecchio L, Cisterna B, Malatesta M, Martin TE, Biggiogera M. Ultrastructural analysis of testes from mice fed on genetically modified soybean. Eur J Histochem 2009. [DOI: 10.4081/920] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
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Martin TE. Evolutionary determinants of clutch size in cavity-nesting birds: nest predation or limited breeding opportunities? Am Nat 2009; 142:937-46. [PMID: 19425942 DOI: 10.1086/285582] [Citation(s) in RCA: 66] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
Large clutch sizes of cavity-nesting birds have been considered a classic example of the consequences of low nest predation for almost half a century. I show that reduced nest predation cannot explain large clutch sizes in cavity-nesting birds. Instead, clutch sizes of cavity-nesting species in North America and Europe are more closely related to the propensity to excavate nest holes. Propensity to excavate is determined by skull and bill morphology of species. Species with weaker excavating morphology depend on existing holes more and have larger clutches and more broods per year than species that excavate new holes. These results cannot be explained by energy costs of excavation. Possible effects of nonreproductive mortality among adults cannot be evaluated. The results support a new hypothesis that the more limited availability of nest sites for species that depend on existing holes favors greater reproductive effort.
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Abstract
Greater nest predation rates on ground-nesting birds than on off-ground-nesting birds have long been assumed and used as an explanation for patterns such as greater cryptic and monomorphic coloration of ground-nesting birds and for area sensitivity and population decline of many Neotropical migrant species. I use three independent data sets to show that this assumption is not true in forest habitats, where nest predation is instead least on ground-nesting birds. Larger clutch sizes and longer nestling periods of ground-nesting species in forest habitats are indirect evidence that ground-nesting species in forest habitats have suffered lower nest predation over evolutionary time. In contrast, ground-nesting birds seem to suffer greater predation than off-ground-nesting species in shrub and grassland habitats, but evaluation of predation is complicated by habitat disturbance in many studies. Nesting mortality in general appears to be greater in shrub and grassland habitats, and species in these habitats are showing some of the most consistent long-term population declines. Additional examination of nesting mortality of coexisting species in various ecological conditions is needed to uncover patterns that may influence evolution of life-history traits and population demographies.
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Cisterna B, Flach F, Vecchio L, Barabino SML, Battistelli S, Martin TE, Malatesta M, Biggiogera M. Can a genetically-modified organism-containing diet influence embryo development? A preliminary study on pre-implantation mouse embryos. Eur J Histochem 2008; 52:263-7. [PMID: 19109102 DOI: 10.4081/1226] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
In eukaryotic cells, pre-mRNAs undergo several transformation steps to generate mature mRNAs. Recent studies have demonstrated that a diet containing a genetically modified (GM) soybean can induce modifications of nuclear constituents involved in RNA processing in some tissues of young, adult and old mice. On this basis, we have investigated the ultrastructural and immunocytochemical features of pre-implantation embryos from mice fed either GM or non- GM soybean in order to verify whether the parental diet can affect the morpho-functional development of the embryonic ribonucleoprotein structural constituents involved in pre-mRNA pathways. Morphological observations revealed that the general aspect of embryo nuclear components is similar in the two experimental groups. However, immunocytochemical and in situ hybridization results suggest a temporary decrease of pre-mRNA transcription and splicing in 2-cell embryos and a resumption in 4-8-cell embryos from mice fed GM soybean; moreover, pre-mRNA maturation seems to be less efficient in both 2-cell and 4-8-cell embryos from GM-fed mice than in controls. Although our results are still preliminary and limited to the pre-implantation phases, the results of this study encourage deepening on the effects of food components and/or contaminants on embryo development.
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Affiliation(s)
- B Cisterna
- Dipartimento di Biologia Animale, Laboratorio di Biologia Cellulare e Neurobiologia, ed Instituto di Genetica Molecolare del CNR, University of Pavia, Italy
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Fontaine JJ, Martin TE. Habitat Selection Responses of Parents to Offspring Predation Risk: An Experimental Test. Am Nat 2006; 168:811-8. [PMID: 17109323 DOI: 10.1086/508297] [Citation(s) in RCA: 119] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2006] [Accepted: 06/23/2006] [Indexed: 11/03/2022]
Abstract
The ability of nest predation to influence habitat settlement decisions in birds is widely debated, despite its importance in limiting fitness. Here, we experimentally manipulated nest predation risk across a landscape and asked the question, do migratory birds assess and respond to variation in nest predation risk when choosing breeding habitats? We examined habitat preference by quantifying the density and settlement date of eight species of migratory passerines breeding in areas with and without intact nest predator communities. We found consistently more individuals nesting in areas with reduced nest predation than in areas with intact predator assemblages, although predation risk had no influence on settlement or breeding phenology. Additionally, those individuals occupying safer nesting habitats exhibited increased singing activity. These findings support a causal relationship between habitat choice and nest predation risk and suggest the importance of nest predation risk in shaping avian community structure and breeding activity.
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Affiliation(s)
- J J Fontaine
- U.S. Geological Survey, Montana Cooperative Wildlife Research Unit, University of Montana, Missoula, Montana 59812, USA.
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Abstract
In birds with altricial young an important stage in the life history is the age at fledging. In this paper we use an approach proven successful in the prediction of the optimal age at maturity in fish and reptiles to predict the optimal age of fledging in passerines. Integrating the effects of growth on future fecundity and survival leads to the prediction that the optimal age at fledging is given by a function that comprises survival to maturity, the exponent of the fecundity-body size relationship and nestling growth. Growth is described by the logistic equation with parameters, A, K and t(i). Assuming that the transitional mortality curve can be approximated by the nestling mortality, M(n), the optimal fledging age, t(f), is given by a simple formula involving the three growth parameters, nestling mortality (M(n)) and the exponent (d) of the fecundity-body size relationship. Predictions of this equation underestimate the true values by 11-16%, which is expected as a consequence of the transitional mortality function approximation. A transitional mortality function in which mortality is approximately 0.3-0.4 of nesting mortality (i.e. mortality declines rapidly after fledging) produces predictions which, on average, equal the observed values. Data are presented showing that mortality does indeed decline rapidly upon fledging.
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Affiliation(s)
- D A Roff
- Department of Biology, University of California, Riverside, CA 92521, USA.
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Abstract
Avian life history theory has long assumed that nest predation plays a minor role in shaping reproductive strategies. Yet, this assumption remains conspicuously untested by broad experiments that alter environmental risk of nest predation, despite the fact that nest predation is a major source of reproductive failure. Here, we examined whether parents can assess experimentally reduced nest predation risk and alter their reproductive strategies. We experimentally reduced nest predation risk and show that in safer environments parents increased investment in young through increased egg size, clutch mass, and the rate they fed nestlings. Parents also increased investment in female condition by increasing the rates that males fed incubating females at the nest, and decreasing the time that females spent incubating. These results demonstrate that birds can assess nest predation risk at large and that nest predation plays a key role in the expression of avian reproductive strategies.
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Fraschini A, Bottone MG, Scovassi AI, Denegri M, Risueño MC, Testillano PS, Martin TE, Biggiogera M, Pellicciari C. Changes in extranucleolar transcription during actinomycin D-induced apoptosis. Histol Histopathol 2005; 20:107-17. [PMID: 15578429 DOI: 10.14670/hh-20.107] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Actinomycin D (AMD) inhibits DNA-dependent RNA polymerases and its selectivity depends on the concentration used; at very high concentrations it may also induce apoptosis. This study investigates the effects of different concentrations (0.01 to 1 microg/ml) of AMD on RNA transcription and maturation and on the organization of nuclear ribonucleoproteins (RNPs), and their relationship with apoptosis induction. Human HeLa cells were used as a model system. At the lowest concentration used, AMD induced the segregation of the nucleolar components and impaired r-RNA synthesis, as revealed by the decreased immunopositivity for bromo-uridine incorporation and for DNA/RNA hybrid molecules. The synthesis of pre-mRNAs, on the contrary, was active, while the immunolabeling of snRNP proteins and of the SC-35 splicing factor strongly decreased on perichromatin fibrils (where they are involved in co-transcriptional splicing). This suggests that the post-transcriptional maturation of extranucleolar RNAs was also affected. Moreover, still in the absence of typical late morphological or biochemical signs of apoptosis (i.e. chromatin condensation), these cells displayed the early apoptotic features, i.e. the externalization of phosphatidylserine residues on the plasma membrane and propidium iodide exclusion in vivo. At the highest concentrations of AMD used, apoptosis massively occurred, with the typical morphological events (progressive chromatin condensation, clustering of snRNPs and SC-35 splicing factor, cell blebbing). However, transcription of hnRNAs was maintained in the residual areas of diffuse chromatin up to advanced apoptotic stages. The inhibition of rRNA synthesis and the defective pre-mRNA maturation seem to be part of the apoptotic process induced by AMD.
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Affiliation(s)
- A Fraschini
- Dipartimento di Biologia Animale, Laboratorio di Biologia Cellulare e Neurobiologia, Università di Pavia, 27100 Pavia, Italy.
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Vecchio L, Cisterna B, Malatesta M, Martin TE, Biggiogera M. Ultrastructural analysis of testes from mice fed on genetically modified soybean. Eur J Histochem 2004; 48:448-54. [PMID: 15718213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/01/2023] Open
Abstract
We have considered the possible effects of a diet containing genetically modified (GM) soybean on mouse testis. This organ, in fact, is a well known bioindicator and it has already been utilized, for instance, to monitor pollution by heavy metals. In this preliminary study, we have focussed our attention on Sertoli cells, spermatogonia and spermatocytes by means of immunoelectron microscopy. Our results point out that the immunolabelling for Sm antigen, hnRNPs, SC35 and RNA Polymerase II is decreased in 2 and 5 month-old GM-fed mice, and is restored to normal at 8 months. In GM-fed mice of all ages considered, the number of perichromatin granules is higher and the nuclear pore density lower. Moreover, we found enlargements in the smooth endoplasmic reticulum in GM-fed mice Sertoli cells. A possible role played by traces of the herbicide to which the soybean is resistant is discussed.
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Alatalo RV, Aragón S, Avilés JM, Barbosa A, Gomes CB, Cadée N, Christe P, Cuervo JJ, Díaz M, Erritzøe J, Galeotti P, Garamszegi LZ, Gil D, Gontard-Danek M, Legendre S, Martin TE, Martínez J, Martín-Vivaldi M, Martínez JG, Merino S, Moreno J, Mousseau T, Ninni P, Petrie M, Pulido F, Rubolini D, Saino N, Soler JJ, Soler M, Spottiswoode C, Szép T, Thornhill R, Zamora C, Sacchi R. Support for a Colleague. Science 2004. [DOI: 10.1126/science.303.5664.1612a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Affiliation(s)
- R. V. Alatalo
- Department of Biological and Environmental Science, University of Jyväskylä, Survontie 9, Jyväskylä, 40500 Finland
| | - S. Aragón
- Laboratoire Endocrinologie Moléculaire, Université Pierre et Marie Curie (Paris VI), Bât. A, 5ème étage, case courrier 29, 7 Quai Saint Bernard, 75252 Paris Cedex 05, France
| | - J. M. Avilés
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Calle General Segura 1, Almería, E-04001 Spain
| | - A. Barbosa
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Calle General Segura 1, Almería, E-04001 Spain
| | - C. Bessa Gomes
- Laboratoire de Parasitologie Évolutive, CNRS UMR 7103, Université Pierre et Marie Curie (Paris VI), 7 Quai St Bernard, CC 237, Bât. A, 7ème étage, 75252 Paris Cedex 05, France
| | | | - P. Christe
- Institute of Ecology, Laboratory of Zoology and Animal Ecology, University of Lausanne, Biology Building, 1015 Lausanne, Switzerland
| | - J. J. Cuervo
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Calle General Segura 1, Almería, E-04001 Spain
| | - M. Díaz
- Departamento de Ciencias Ambientales, Facultad de Ciencias del Medio Ambiente, Universidad Castilla La Mancha, E-45071 Toledo, Spain
| | - J. Erritzøe
- House of Bird Research, Taps Old Rectory, Oedisvej 43, Taps, DK-6070 Christiansfeld, Denmark
| | - P. Galeotti
- Dipartimento de Biologia Animale, Lab Ecoetol, Università degli Studi di Pavia, Piazza Botta 9, I-27100 Pavia, Italy
| | - L. Z. Garamszegi
- Department of Biology, Universitaire Instelling Antwerpen, UIA Universiteitsplein 1, B-2610 Wilrijk, Belgium
| | - D. Gil
- Departamento Ecología Evolutiva, Museo Nacional Ciencias Naturales, CSIC, José Gutierrez Abascal 2, Madrid, E-28006 Spain
| | - M. Gontard-Danek
- Laboratoire de Parasitologie Évolutive, CNRS UMR 7103, Université Pierre et Marie Curie (Paris VI), 7 Quai St Bernard, CC 237, Bât. A, 7ème étage, 75252 Paris Cedex 05, France
| | - S. Legendre
- Laboratoire d'Ecologie, Eco-Evolutionary Team, Ecole Normale Supérieure, 46 rue d'Ulm, 75230 Paris Cedex 05, France
| | - T. E. Martin
- U.S. Geological Survey, Biological Resources Division, Avian Studies Program, Montana Cooperative Wildlife Research Unit, University of Montana, Missoula, MT 59812, USA
| | - J. Martínez
- Departamento de Microbiología y Parasitología, Facultad de Farmacia, Universidad de Alcalá, 28871 Alcalá de Henares, Spain
| | - M. Martín-Vivaldi
- Departamento de Biología Animal y Ecología, Facultad de Ciencias, Universidad de Granada, Granada, E-18071 Spain
| | - J. G. Martínez
- Departamento de Biología Animal y Ecología, Facultad de Ciencias, Universidad de Granada, Granada, E-18071 Spain
| | - S. Merino
- Departamento Ecología Evolutiva, Museo Nacional Ciencias Naturales, CSIC, José Gutierrez Abascal 2, Madrid, E-28006 Spain
| | - J. Moreno
- Departamento Ecología Evolutiva, Museo Nacional Ciencias Naturales, CSIC, José Gutierrez Abascal 2, Madrid, E-28006 Spain
| | - Tim Mousseau
- Department of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA
| | - P. Ninni
- Laboratoire de Parasitologie Évolutive, CNRS UMR 7103, Université Pierre et Marie Curie (Paris VI), 7 Quai St Bernard, CC 237, Bât. A, 7ème étage, 75252 Paris Cedex 05, France
| | - M. Petrie
- Department of Psychology, Evolution and Behavioral Research Group, University of Newcastle, Newcastle Upon Tyne, Tyne & Wear, NE1 4HH UK
| | - F. Pulido
- Grupo de Investigación Forestal, Departamento de Biología y Producción de los Vegetales, EIT Forestal, Universidad de Extremadura, Avenida Virgen del Puerto, 2, 10600 Plasencia, Cáceres, Spain
| | - D. Rubolini
- Dipartimento de Biologia Animale, Lab Ecoetol, Università degli Studi di Pavia, Piazza Botta 9, I-27100 Pavia, Italy
| | - N. Saino
- Dipartimento di Biologia, Università di Milano, Milan, I-20133 Italy
| | - J. J. Soler
- Departamento de Ecología Funcional y Evolutiva, Estación Experimental de Zonas Áridas (CSIC), Calle General Segura 1, Almería, E-04001 Spain
| | - M. Soler
- Departamento de Biología Animal y Ecología, Facultad de Ciencias, Universidad de Granada, Granada, E-18071 Spain
| | - C. Spottiswoode
- Department of Zoology, University of Cambridge, Downing Street, Cambridge CB2 3EJ, UK
| | - T. Szép
- Department of Environmental Sciences, College of Nyíregyháza, Nyíregyháza, H-4401 Hungary
| | - R. Thornhill
- Department of Biology, University of New Mexico, Albuquerque, NM 87131, USA
| | - C. Zamora
- Departamento de Biología Animal y Ecología, Facultad de Ciencias, Universidad de Granada, Granada, E-18071 Spain
| | - Roberto Sacchi
- Dipartimento de Biologia Animale, Lab Ecoetol, Università degli Studi di Pavia, Piazza Botta 9, I-27100 Pavia, Italy
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Alatalo RV, Aragón S, Avilés JM, Barbosa A, Gomes CB, Cadée N, Christe P, Cuervo JJ, Díaz M, Erritzøe J, Galeotti P, Garamszegi LZ, Gil D, Gontard-Danek M, Legendre S, Martin TE, Martínez J, Martín-Vivaldi M, Martínez JG, Merino S, Moreno J, Mousseau T, Ninni P, Petrie M, Pulido F, Rubolini D, Saino N, Soler JJ, Soler M, Spottiswoode C, Szép T, Thornhill R, Zamora C, Sacchi R. Corrections and Clarifications. Science 2004; 303:1612. [PMID: 15016981 DOI: 10.1126/science.303.5664.1612b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
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Vázquez-Nin GH, Echeverría OM, Ortiz R, Scassellati C, Martin TE, Ubaldo E, Fakan S. Fine structural cytochemical analysis of homologous chromosome recognition, alignment, and pairing in Guinea pig spermatogonia and spermatocytes. Biol Reprod 2003; 69:1362-70. [PMID: 12801987 DOI: 10.1095/biolreprod.103.016485] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/01/2022] Open
Abstract
The nuclei of guinea pig spermatogonia and spermatocytes were studied by means of quantitative autoradiography and electron microscopic methods such as high-resolution cytochemistry, immunocytochemistry, and in situ hybridization. Our observations reveal, in the nucleus of spermatogonia type B, small lampbrush structures of extended chromatin not found in nonmeiotic cells. During meiotic interphase, pairs of parallel lampbrush structures become associated by numerous filaments. The formation of the synaptonemal complex is simultaneous with the extension of chromosomal axes in a continuous leptotene-zygotene stage. Some chromosomes do not recognize their homologs before the onset of the leptotene-zygotene stage and undergo classical leptotene and zygotene stages. The immunocytochemical localization of Dmc1 and Rad51 supports the idea that these proteins are not involved in homology search and final pairing. Immunolocalization of DNA, RNA polymerase II, heterogeneous nuclear ribonucleoproteins, small nuclear ribonucleoproteins, and the trimethyl-guanosin cap of small nuclear RNAs suggests that the chromatin of lampbrush structures transcribe hnRNA and that splicing is scarce. The results of quantitative autoradiography after [3H]uridine labeling show an intense transcription accompanied by a very slow export of RNA. In situ hybridization demonstrates the presence of RNA in the regions of homology recognition and pairing. These results lead us to propose that the RNA synthesized in the lampbrush structures is involved in the process of homology searching and recognition.
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Affiliation(s)
- G H Vázquez-Nin
- Laboratory of Electron Microscopy, Department of Cell Biology, Faculty of Sciences, National Autonomous University of Mexico, Mexico D.F., Mexico
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Pellicciari C, Bottone MG, Scovassi AI, Martin TE, Biggiogera M. Rearrangement of nuclear ribonucleoproteins and extrusion of nucleolus-like bodies during apoptosis induced by hypertonic stress. Eur J Histochem 2001; 44:247-54. [PMID: 11095096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023] Open
Abstract
Short-term hypertonic (HT) stress induces apoptotic cell death in human EUE cells in culture, as observed by electron microscopy, agarose-gel electrophoresis of low-molecular-weight DNA, DNA flow cytometry and annexin-V-propidium iodide double-staining. During HT-induced apoptosis, nuclear ribonucleoprotein (RNP)-containing structures undergo rearrangement, with the formation of Heterogeneous Ectopic RNP-Derived Structures (HERDS) which pass into the cytoplasm, as already reported for other examples of spontaneous and drug-induced apoptosis. Of special interest was the observation that nucleolus-like bodies (NLBs) which resemble morphologically nuclear functional nucleoli may be extruded into the cytoplasm of apoptotic cells and are observed inside the cytoplasmic fragments blebbing-out at the cell surface; these NLBs still contain immunodetectable nucleolar proteins (such as fibrillarin). This is an additional example of RNP-containing structures of nuclear origin which are extruded from the nucleus, in an almost "native" form, during apoptosis.
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Affiliation(s)
- C Pellicciari
- Dipartimento di Biologia Animale and Centro di Studio per l'Istochimica del CNR, University of Pavia, Italy.
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Abstract
Life history theory predicts that parents should value their own survival over that of their offspring in species with a higher probability of adult survival and fewer offspring. We report that Southern Hemisphere birds have higher adult survival and smaller clutch sizes than Northern Hemisphere birds. We subsequently manipulated predation risk to adults versus offspring in 10 species that were paired between North and South America on the basis of phylogeny and ecology. As predicted, southern parents responded more strongly to reduce mortality risk to themselves even at a cost to their offspring, whereas northern parents responded more strongly to reduce risk to their offspring even at greater risk to themselves.
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Affiliation(s)
- C K Ghalambor
- U.S. Geological Survey Biological Resources Division, Montana Cooperative Wildlife Research Unit, Avian Studies Program, University of Montana, Missoula, MT 59812, USA.
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Storb U, Peters A, Kim N, Shen HM, Bozek G, Michael N, Hackett J, Klotz E, Reynolds JD, Loeb LA, Martin TE. Molecular aspects of somatic hypermutation of immunoglobulin genes. Cold Spring Harb Symp Quant Biol 2001; 64:227-34. [PMID: 11232290 DOI: 10.1101/sqb.1999.64.227] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Affiliation(s)
- U Storb
- Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, Illinois 60637, USA
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24
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Johnson K, Bakhsh A, Young D, Martin TE, Arnold M. Correlating computed tomography and positron emission tomography scan with operative findings in metastatic colorectal cancer. Dis Colon Rectum 2001; 44:354-7. [PMID: 11289280 DOI: 10.1007/bf02234732] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
Abstract
INTRODUCTION Several studies have been performed comparing computed tomography scan with positron emission tomography scan in clinical decision making. Unfortunately, therapeutic decisions are being made based on positron emission tomography scan data without a clear understanding of how well the diagnostic findings correlate with the clinical findings. METHODS A retrospective review of 41 patients with metastatic colorectal cancer was performed. All patients had both a computed tomography scan and a positron emission tomography scan before surgical exploration. All underwent surgical re-exploration. Findings were divided into hepatic, extrahepatic, and pelvic regions of the abdomen. Computed tomography scan and positron emission tomography scan findings were either confirmed or refuted by the operative findings. RESULTS Positron emission tomography scan was found to be more sensitive than computed tomography scan when compared with actual operative findings in the liver (100 vs. 69 percent, P = 0.004), extrahepatic region (90 vs. 52 percent, P = 0.015), and abdomen as a whole (87 vs. 61 percent, P < 0.001). Sensitivities of positron emission tomography scan and computed tomography scan were not significantly different in the pelvic region (87 vs. 61 percent, P = 0.091). In each case, specificity was not significantly different between the two examinations. CONCLUSION Computed tomography scan and positron emission tomography scan are both diagnostic tests useful in the evaluation of metastatic colorectal cancer. However, positron emission tomography scanning is more sensitive than computed tomography scanning and more likely to give the correct result when actual metastatic disease is present.
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Affiliation(s)
- K Johnson
- Grant Medical Center, Columbus, Ohio, USA
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25
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Martin TE, Møller AP, Merino S, Clobert J. Does clutch size evolve in response to parasites and immunocompetence? Proc Natl Acad Sci U S A 2001; 98:2071-6. [PMID: 11172077 PMCID: PMC29383 DOI: 10.1073/pnas.98.4.2071] [Citation(s) in RCA: 106] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2000] [Indexed: 11/18/2022] Open
Abstract
Parasites have been argued to influence clutch size evolution, but past work and theory has largely focused on within-species optimization solutions rather than clearly addressing among-species variation. The effects of parasites on clutch size variation among species can be complex, however, because different parasites can induce age-specific differences in mortality that can cause clutch size to evolve in different directions. We provide a conceptual argument that differences in immunocompetence among species should integrate differences in overall levels of parasite-induced mortality to which a species is exposed. We test this assumption and show that mortality caused by parasites is positively correlated with immunocompetence measured by cell-mediated measures. Under life history theory, clutch size should increase with increased adult mortality and decrease with increased juvenile mortality. Using immunocompetence as a general assay of parasite-induced mortality, we tested these predictions by using data for 25 species. We found that clutch size increased strongly with adult immunocompetence. In contrast, clutch size decreased weakly with increased juvenile immunocompetence. But, immunocompetence of juveniles may be constrained by selection on adults, and, when we controlled for adult immunocompetence, clutch size decreased with juvenile immunocompetence. Thus, immunocompetence seems to reflect evolutionary differences in parasite virulence experienced by species, and differences in age-specific parasite virulence appears to exert opposite selection on clutch size evolution.
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Affiliation(s)
- T E Martin
- U.S. Geological Survey Biological Resources Division, Montana Cooperative Wildlife Research Unit, Avian Studies Program, University of Montana, Missoula, MT 59812, USA.
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26
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Abstract
Alexander Skutch hypothesized that increased parental activity can increase the risk of nest predation. We tested this hypothesis using ten open-nesting bird species in Arizona, USA. Parental activity was greater during the nestling than incubation stage because parents visited the nest frequently to feed their young during the nestling stage. However, nest predation did not generally increase with parental activity between nesting stages across the ten study species. Previous investigators have found similar results. We tested whether nest site effects might yield higher predation during incubation because the most obvious sites are depredated most rapidly. We conducted experiments using nest sites from the previous year to remove parental activity. Our results showed that nest sites have highly repeatable effects on nest predation risk; poor nest sites incurred rapid predation and caused predation rates to be greater during the incubation than nestling stage. This pattern also was exhibited in a bird species with similar (i.e. controlled) parental activity between nesting stages. Once nest site effects are taken into account, nest predation shows a strong proximate increase with parental activity during the nestling stage within and across species. Parental activity and nest sites exert antagonistic influences on current estimates of nest predation between nesting stages and both must be considered in order to understand current patterns of nest predation, which is an important source of natural selection.
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Affiliation(s)
- T E Martin
- United States Geological Survey Biological Resources Division, University of Montana, Missoula, MT 59812, USA.
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27
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Kopecný V, Biggiogera M, Pivko J, Pavlok A, Martin TE, Kaufmann SH, Shaper JH, Fakan S. Fine-structural cytochemical and immunocytochemical observations on nuclear bodies in the bovine 2-cell embryo. ZYGOTE 2000; 8:315-28. [PMID: 11108553 DOI: 10.1017/s0967199400001118] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Nuclear bodies occurring during the 2-cell stage of bovine embryos (obtained either by in vitro fertilisation of in vitro matured ovarian oocytes, or collection after fertilisation and cleavage in vivo) were studied using ultrastructural cytochemistry and immunocytochemistry to determine whether their occurrence may be linked with the onset of embryonic transcription. In addition, the species-specific ultrastructural features of the interchromatin structures of the 2-cell bovine embryo were displayed. Three different types of nuclear bodies were distinguished: (i) nucleolus precursor bodies (NPBs), (ii) loose bodies (LBs) and (iii) dense bodies (DBs). In order to determine their possible functional significance, we considered parallels between these three nuclear entities and interchromatin compartments reported in other cells. As detected by their preferential ribonucleoprotein staining, all types of nuclear bodies contained ribonucleoproteins. In contrast to the other types of nuclear bodies studied, NPBs contained argyrophilic proteins but in no case they did show morphological features of functional nucleoli. Both compact and vacuolated forms of NPBs were seen in both in vivo and in vitro embryos, sometimes simultaneously in the same nucleus. LBs and DBs reacted with antibodies to Sm antigen, indicating the presence of a group of nucleoplasmic, non-nucleolar small nuclear ribonucleoproteins (snRNPs). The immunoreactivity for Sm antigen was more intense and homogeneous in DBs than in LBs. DBs were seen in both categories of embryo. A possible kinship of DBs with the sphere organelle known from oocytes of different animal species or the prominent spherical inclusions of the early mouse embryo nuclei is suggested. The last type of intranuclear body, the LBs, showed a composite structure. Their granular component, occurring in clusters and displaying immunoreactivity for Sm antigen, was similar to interchromatin granules and was therefore named IG-like granules. Another component forming the LBs showed a much finer structure and a lower immunoreactivity with anti-Sm antibodies. We suggest that this amorphous component may be related to the IG-associated zone. All three types of intranuclear bodies were often seen close together, suggesting their possible mutual functional relationship. From these and other observations we conclude that the intranuclear bodies in 2-cell bovine embryos correspond, with the exception of the NPB, to similar structures/compartments supposed to accumulate inactive spliceosomal components in certain phases of somatic cell nucleus functions. Accordingly, the occurrence of such nuclear bodies does not represent cytological evidence for RNA synthesis. In contrast to this, an important morphological feature revealing the status of the bovine 2-cell embryo is the vacuolisation of the NPB.
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Affiliation(s)
- V Kopecný
- Research Institute of Animal Production, Nitra, Slovakia
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28
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Malatesta M, Gazzanelli G, Battistelli S, Martin TE, Amalric F, Fakan S. Nucleoli undergo structural and molecular modifications during hibernation. Chromosoma 2000; 109:506-13. [PMID: 11151681 DOI: 10.1007/s004120000102] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
Abstract
The nucleolus is a very dynamic structure able rapidly to adapt its activity to the cellular metabolic state. An interesting physiological model characterized by drastic modifications of cellular metabolism is represented by hibernating animals. In the present study we investigated the hepatocyte nuclei of euthermic and hibernating edible dormice (Glis glis) with the aim of revealing, by means of ultrastructural and immunocytochemical analyses, possible modifications of nucleolar components during hibernation. Our observations demonstrate that, in deep hibernation, nucleoli undergo structural and molecular modifications: (a) they show numerous nucleoplasmic invaginations and clumps of dense fibrillar component extend from the nucleolar surface; (b) they are frequently in contact with coiled bodies and fibro-granular material, two nuclear bodies usually occurring in the nucleoplasm; (c) the dense fibrillar component contains significant amounts of small nuclear ribonucleoproteins, splicing factors usually distributed in the nucleoplasm. Taken together, these results suggest that during hibernation complex relationships are established between the nucleolus and nucleoplasm, probably related to functional activities peculiar to this physiological phase. However, since no evident nucleolar modification was found in early hibernating dormice, it seems likely that the particular structural and molecular arrangement of nucleoli establishes progressively during hibernation, becoming evident only in the deepest phase, and then disappears upon arousal.
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Affiliation(s)
- M Malatesta
- Istituto di Istologia ed Analisi di Laboratorio, University of Urbino, 61029 Urbino, Italy.
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29
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Ghalambor CK, Martin TE. Parental investment strategies in two species of nuthatch vary with stage-specific predation risk and reproductive effort. Anim Behav 2000; 60:263-267. [PMID: 10973729 DOI: 10.1006/anbe.2000.1472] [Citation(s) in RCA: 125] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Life-history theory predicts that differences in reproductive effort and residual reproductive value among species should result in differences in the level of risk that parents are willing to tolerate to themselves versus their offspring. Specifically, highly fecund and shorter-lived species are expected to place greater value in current offspring than themselves, whereas less fecund and longer-lived species are expected to place greater value in their own survival and future breeding opportunities. Here, we test the prediction that parental investment decisions are correlated with life histories by comparing risk-taking behaviour in two species of nuthatch that differ in reproductive effort: the white-breasted nuthatch, Sitta carolinensis (more fecund, lower survival) and the red-breasted nuthatch, S. canadensis (less fecund, higher survival). We experimentally manipulated stage-specific predation risk by presenting models of an adult predator (hawk) and an egg predator (wren) and measured the willingness of males to feed incubating females on the nest. We found that both species of nuthatch responded to predators by increasing the length of time between visits and aborting more visits to the nest. However, as predicted by their life histories, S. carolinensis displayed a significantly stronger response to the egg predator, whereas S. canadensis responded more strongly to the adult predator. Thus, species can differ in their willingness to tolerate risk to themselves and their young, and such differences appear to be related to differences in investment in current reproduction and the probability of future survival. Copyright 2000 The Association for the Study of Animal Behaviour.
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Affiliation(s)
- CK Ghalambor
- Montana Cooperative Wildlife Research Unit, University of Montana
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30
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Abstract
Sexual dimorphism is thought to have evolved in response to selection pressures that differ between males and females. Our aim in this study was to determine the role of current net selection in shaping and maintaining contemporary sexual dimorphism in a recently established population of the house finch (Carpodacus mexicanus) in Montana. We found strong differences between sexes in direction of selection on sexually dimorphic traits, significant heritabilities of these traits, and a close congruence between current selection and observed sexual dimorphism in Montana house finches. Strong directional selection on sexually dimorphic traits and similar intensities of selection in each sex suggested that sexual dimorphism arises from adaptive responses in males and females, with both sexes being far from their local fitness optimum. This pattern is expected when a recently established population experiences continuous immigration from ecologically distinct areas of a species range or as a result of widely fluctuating selection pressures, as found in our study. Strong and sexually dimorphic selection pressures on heritable morphological traits, in combination with low phenotypic and genetic covariation among these traits during growth, may have accounted for close congruence between current selection and observed sexual dimorphism in the house finch. This conclusion is consistent with the profound adaptive population divergence in sexual dimorphism that accompanied very successful colonization of most of the North America by the house finch over the last 50 years.
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Affiliation(s)
- A V Badyaev
- Division of Biological Sciences, University of Montana, Missoula, 59812-1002, USA
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31
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Abstract
Incubation behavior is one component of reproductive effort and thus influences the evolution of life-history strategies. We examined the relative importance of body mass, frequency of mate feeding, food, nest predation, and ambient temperature to explain interspecific variation in incubation behavior (nest attentiveness, on- and off-bout durations, and nest trips per hour) using comparative analyses for North American passerines in which only females incubate. Body mass and frequency of mate feeding explained little variation in incubation behavior. We were also unable to detect any influence of foot; diet and foraging strategy explained little interspecific variation in incubation behavior. However, the typical temperature encountered during reproduction explained significant variation in incubation behavior: Species breeding in colder environments take shorter bouts off the nest, which prevents eggs from cooling to temperatures below the physiological zero temperature. These species must compensate for shorter off-bouts by taking more of them (thus shorter on-bouts) to obtain needed energy for incubation. Nest predation also explains significant variation in incubation behavior among passerines: Species that endure high nest predation have evolved an incubation strategy (long on- and off-bouts) that minimizes activity that could attract predators. Nest substrate explained additional variation in incubation behavior (cavity-nesting birds have shorter on-bouts and make more frequent nest trips), presumably because nest predation and/or temperature varies among nest substrates. Thus, nest predation can influence reproductive effort in a way previously not demonstrated--by placing a constraint on parental activity at the nest. Incubating birds face an ecological cost associated with reproductive effort (predation of entire brood) that should be considered in future attempts to explain avian life-history evolution.
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Affiliation(s)
- C J Conway
- Montana Cooperative Wildlife Research Unit, University of Montana, Missoula 59812, USA. ,
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32
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Abstract
The evolutionary causes of small clutch sizes in tropical and Southern Hemisphere regions are poorly understood. Alexander Skutch proposed 50 years ago that higher nest predation in the south constrains the rate at which parent birds can deliver food to young and thereby constrains clutch size by limiting the number of young that parents can feed. This hypothesis for explaining differences in clutch size and parental behaviors between latitudes has remained untested. Here, a detailed study of bird species in Arizona and Argentina shows that Skutch's hypothesis explains clutch size variation within North and South America. However, neither Skutch's hypothesis nor two major alternatives explain differences between latitudes.
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Affiliation(s)
- T E Martin
- U.S. Geological Survey Biological Resources Division, Missoula, MT 59812, USA.
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33
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Abstract
BACKGROUND Meniscal loss may result in arthritis. The aim of this study was to establish a simple operative method for meniscal transplantation in a large-animal model and to determine whether meniscal transplantation provides protection of the articular surfaces, whether meniscal allografts have the same protective effect as meniscal autogenous grafts, and whether there is any rejection phenomenon associated with meniscal allografts. METHODS Twenty-eight sheep were divided into four study groups, which were treated with (1) a sham operation (four sheep), (2) a meniscectomy (eight sheep), (3) a meniscal autogenous graft (eight sheep), or (4) a meniscal allograft (eight sheep). The meniscal transplant was secured with three suture anchors to the tibia. At four months after the operation, macroscopic and microscopic evaluations of the articular cartilage and the menisci of the sheep knees were performed in a blinded fashion. RESULTS The group treated with the sham operation had no cartilage damage and had normal meniscal tissue. The meniscectomies resulted in significant macroscopic and microscopic damage to the articular cartilage in the medial compartment. The mean score (and standard error of the mean) for macroscopic damage to the cartilage in the group treated with the meniscectomy was 6.5+/-0.8 points compared with 3.9+/-0.7 points in the group treated with the autogenous graft and 4.3+/-0.6 points in the group treated with the allograft (p<0.05). The size of the area of damaged articular cartilage was reduced by approximately 50 percent in both groups treated with a meniscal transplant compared with the group treated with the meniscectomy (p<0.05). There were no significant differences between the group treated with the autogenous graft and that treated with the allograft. The histological appearance of the meniscal autogenous grafts was within normal limits. Interestingly, all of the allografts had evidence of fibrinoid degeneration with areas of hypocellularity and cloning of chondroid cells. CONCLUSIONS These results suggest that meniscal transplantation provides noticeable although not complete protection against damage to the articular cartilage after a meniscectomy. The meniscal allografts were just as effective in providing this protection as were the meniscal autogenous grafts.
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Affiliation(s)
- Z L Szomor
- Department of Orthopaedic Surgery, Orthopaedic Research Institute, St. George Hospital Campus, University of New South Wales, Kogarah, Sydney, Australia
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Biggiogera M, Trentani A, Martin TE, Pellicciari C. Terminal differentiation of erythroblasts leads to RNP segregation and formation of heterogeneous ectopic RNP-derived structures. Histochem Cell Biol 1999; 112:473-7. [PMID: 10651099 DOI: 10.1007/s004180050431] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We show an as yet unnoticed feature of mammalian erythrocyte maturation, i.e., the formation of heterogeneous ectopic RNP-derived structures in the nucleus of erythroblasts, occurring in parallel with chromatin condensation. Inside these structures, RNPs are always recognized by specific antibodies, which demonstrates that the protein moieties of RNPs still preserve (at least partially) their native organization. This phenomenon shares extensive similarity with the segregation and clustering of nuclear RNPs occurring during spontaneous apoptosis of rat thymocytes and in several other cell models in which transcription is physiologically arrested.
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Affiliation(s)
- M Biggiogera
- Dipartimento di Biologia Animale, Centro di Studio per l'Istochimica del CNR, University of Pavia, Italy.
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35
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Abstract
Using a specific ultracytochemical technique, the labelling with phospholipase A2-gold complex, we have followed nuclear phospholipids (PL) along the G1 phase in human lymphocytes activated by PHA. Our data point out two main results relating nuclear PL to the transcriptional activity, characteristic of the G1 phase, during which many different molecules necessary both for progression through G1 and for the start of S phase are synthesized. PL quantitative changes parallel those of hnRNPs and snRNPs, which are markers of the levels of transcriptional activity and processing. We found that nuclei of G0 lymphocytes, with a very low transcription level, are poor of PL as well as of RNPs. The amount of PL increases in activated lymphocytes, along all G1, until the beginning of S phase. At the same time, hnRNPs and snRNPs strongly increase and maintain higher levels than in control cells, till the beginning of S phase. PL are localized on nuclear structures where also RNPs involved in transcription and splicing, are located, i. e. perichromatin fibrils, interchromatin granules and the dense fibrillar component of the nucleolus. Since it is known that during S phase nuclear PL decrease, while both the enzyme activities related to their breakdown and their hydrolysis products increase, PL seem to be involved in the generation of signal molecules triggering DNA replication. We suggest that PL in the nucleus can be involved in multiple functions, depending on the phase of the cell cycle.
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Affiliation(s)
- A Fraschini
- Dipartimento di Biologia Animale dell'Universitá di Pavia, Centro di Studio per l'Istochimica del CNR,Italy
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36
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Tuch BE, Wright DC, Martin TE, Keogh GW, Deol HS, Simpson AM, Roach W, Pinto AN. Differentiation of fetal pig endocrine cells after allografting into the thymus gland. Transplantation 1999; 67:1184-7. [PMID: 10232572 DOI: 10.1097/00007890-199904270-00017] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
BACKGROUND The thymus of large animals, such as the pig, is thought to be an appropriate site for transplanting adult islets, which contain numerous beta cells, for the purpose of reversing diabetes. Whether fetal islet-like cell clusters (ICCs), which contain few beta cells, will develop at this site, so that adequate amounts of insulin can be produced, is unknown. METHODS Between 15,000 and 40,000 ICCs were injected into the thymus gland of six juvenile immunosuppressed pigs, and the animals were killed up to 30 days later. The graft was then examined histologically and comparisons made with untransplanted ICCs and those grafted into the omentum of immunosuppressed pigs. RESULTS At transplantation, the percentage of cells in the ICCs containing insulin, glucagon, somatostatin, or pancreatic polypeptide was 9+/-1%, 13+/-2%, 9+/-1%, and 3+/-1% respectively. Within 9-30 days of transplantation into the thymus, the percentage of all endocrine cells increased, insulin to 41+/-3%, glucagon to 43+/-6%, somatostatin to 26+/-4%, and pancreatic polypeptide to 9+/-3%. There was co-localization of more than one hormone in some cells. Omental grafts contained a similar percentage of insulin and glucagon-containing cells, but significantly fewer somatostatin and pancreatic polypeptide-containing cells. CONCLUSIONS Endocrine cells from the fetal pig pancreas will differentiate when transplanted into the thymus gland of the pig, making this a suitable site for grafting ICCs to test their ability to normalize blood glucose levels of diabetic recipients.
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Affiliation(s)
- B E Tuch
- Pancreas Transplant Group, Prince of Wales Hospital, Sydney, New South Wales, Australia.
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37
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38
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Abstract
In previous studies we demonstrated in several tissues of the hazel dormouse Muscardinus avellanarius that during hibernation cell nuclei contain particular structural constituents absent in euthermia. In the present study we examine the same tissues in euthermic and hibernating individuals of the edible dormouse Glis glis in order to investigate possible modifications of nuclear structural constituents occurring during hibernation in this species. Edible dormice were captured in the wild and maintained in an external animal house. Samples of liver, pancreas, brown adipose tissue and adrenal cortex were taken from three hibernating and three euthermic animals and processed for resin embedding. Ultrastructural and immunocytochemical studies were carried out on cell nuclei of these tissues. The most evident feature of cell nuclei of hibernating dormice was the presence of several nuclear bodies, namely fibro-granular material, amorphous bodies, coiled bodies, perichromatin granule-like granules and nucleoplasmic fibrils, the distribution of which was peculiar to each tissue. No one of these constituents was detectable during euthermia. Immunocytochemical analyses revealed that they contain some splicing factors. Apart from some differences, maybe due to the different characteristics of lethargy, the nuclear bodies found in edible dormice were morphologically and immunocytochemically similar to those previously described in the same tissues of hazel dormice. They therefore seem to be strictly correlated to the hibernating state. If they represent storage and/or assembly sites of splicing factors to be rapidly used upon arousal, they could represent a usual structural feature in cells of hibernating species.
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Affiliation(s)
- M Malatesta
- Institute of Histology and Laboratory Analyses, University of Urbino, Italy.
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39
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Tuch BE, Wright DC, Martin TE, Keogh GW, Deol HS, Simpson AM, Roach W, Pinto AN. Fetal pig endocrine cells develop when allografted into the thymus gland. Transplant Proc 1999; 31:670. [PMID: 10083288 DOI: 10.1016/s0041-1345(98)01742-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Affiliation(s)
- B E Tuch
- Pancreas Transplant Unit, Prince of Wales Hospital, Randwick NSW, Australia
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40
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Cmarko D, Verschure PJ, Martin TE, Dahmus ME, Krause S, Fu XD, van Driel R, Fakan S. Ultrastructural analysis of transcription and splicing in the cell nucleus after bromo-UTP microinjection. Mol Biol Cell 1999; 10:211-23. [PMID: 9880337 PMCID: PMC25164 DOI: 10.1091/mbc.10.1.211] [Citation(s) in RCA: 197] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022] Open
Abstract
In this study we demonstrate, at an ultrastructural level, the in situ distribution of heterogeneous nuclear RNA transcription sites after microinjection of 5-bromo-UTP (BrUTP) into the cytoplasm of living cells and subsequent postembedding immunoelectron microscopic visualization after different labeling periods. Moreover, immunocytochemical localization of several pre-mRNA transcription and processing factors has been carried out in the same cells. This high-resolution approach allowed us to reveal perichromatin regions as the most important sites of nucleoplasmic RNA transcription and the perichromatin fibrils (PFs) as in situ forms of nascent transcripts. Furthermore, we show that transcription takes place in a rather diffuse pattern, without notable local accumulation of transcription sites. RNA polymerase II, heterogeneous nuclear ribonucleoprotein (hnRNP) core proteins, general transcription factor TFIIH, poly(A) polymerase, splicing factor SC-35, and Sm complex of small nuclear ribonucleoproteins (snRNPs) are associated with PFs. This strongly supports the idea that PFs are also sites of major pre-mRNA processing events. The absence of nascent transcripts, RNA polymerase II, poly(A) polymerase, and hnRNPs within the clusters of interchromatin granules rules out the possibility that this domain plays a role in pre-mRNA transcription and polyadenylation; however, interchromatin granule-associated zones contain RNA polymerase II, TFIIH, and Sm complex of snRNPs and, after longer periods of BrUTP incubation, also Br-labeled RNA. Their role in nuclear functions still remains enigmatic. In the nucleolus, transcription sites occur in the dense fibrillar component. Our fine structural results show that PFs represent the major nucleoplasmic structural domain involved in active pre-mRNA transcriptional and processing events.
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Affiliation(s)
- D Cmarko
- Centre of Electron Microscopy, University of Lausanne, 1005 Lausanne, Switzerland
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41
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Storb U, Peters A, Klotz E, Kim N, Shen HM, Hackett J, Rogerson B, O'Brien R, Martin TE. Immunoglobulin transgenes as targets for somatic hypermutation. Int J Dev Biol 1998; 42:977-82. [PMID: 9853828] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
Abstract
This review describes studies on somatic hypermutation of immunoglobulin genes that were started in the mid-80s in collaboration with Ralph Brinster. Almost all of the experiments were carried out using Ig transgenes as targets for the somatic mutation mechanism. Ig transgenes can be very good targets of somatic mutation, despite many different transgene integration sites. Thus, the required cis-acting elements must be present within the approximately 10 kb of the transgene. Only the Ig variable region and its proximate flanks are mutated, not the constant region in unmanipulated sequences. Several Ig gene enhancers are permissive for somatic mutation and they do not have to be associated with the Ig promoter they normally interact with. However, the mutation process does seem to be specific for Ig genes. No mutations were found in several housekeeping genes isolated from cells that had very high levels of somatic hypermutation of their Ig genes. This suggests that the Ig enhancers provide the lg gene specificity. An exception is the Bcl-6 gene, encoding a transcription factor, which was found to be mutated in normal human memory B cells. When the transcriptional promoter that is located upstream of the variable region is duplicated upstream of the constant region, this region is mutated as well. This suggests a transcription coupled model in which a mutator factor associates with the RNA polymerase at the initiation of transcription, travels with the polymerase during elongation, and causes mutations during polymerase pausing. Our recent data with an artificial substrate for somatic mutation suggest that the mutations are increased by increased stability of the secondary structures in the nascent RNA, and the specific nucleotides that are mutated are due to preferences of a mutator factor.
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Affiliation(s)
- U Storb
- Department of Molecular Genetics and Cell Biology, University of Chicago, IL 60637, USA.
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Martin TE. Using functional magnetic resonance imaging to understand the mechanisms of consciousness. Aviat Space Environ Med 1998; 69:1146-57. [PMID: 9856538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 02/09/2023]
Abstract
BACKGROUND In order to elucidate mental functions that subserve human consciousness, brain activation was investigated in 12 normal, right-handed volunteers who performed tasks of selective attention, working memory, and sensorimotor coordination during the collection of multislice echoplanar functional magnetic resonance images. HYPOTHESIS These functions are located in (and controlled by) distinct anatomical regions that can be identified by functional magnetic resonance imaging techniques. METHODS In each subject, 100 10-slice data sets were acquired using a 1.5-T scanner and the blood oxygenation level dependent contrast technique. Time-series regression modeling estimated power in the magnetic resonance signal during the on/off phases of task performance. Comparison between subjects was made possible by the transformation of each data set into standard Talairach space. RESULTS Activation maps were based on the median value of the fundamental power quotient at each voxel. Results showed the activation of prefrontal and parasagittal cortices in both the selective attention and working memory tasks, but they also revealed activation in both insular cortices and the posterior cingulate gyri. CONCLUSIONS The results provide evidence for structures in the anterior right hemisphere and left medial frontal lobe for attentional tasks, although there appears to be an engagement of a widespread network of anterior brain structures, possibly with the inhibition of some posterior regions, during task performance. The sensorimotor coordination task showed activation regions similar to those seen in selective attention. Once learned, this task probably demands attention rather than overt conscious motor control. Clearly, the functions of attention, working memory, and sensorimotor coordination are not located in single, discrete brain areas. However, interactions and interplay between related areas were demonstrated, giving supporting evidence that complex mental operations rely on the coordinated activity of widely distributed brain regions that contribute to neural networks.
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Affiliation(s)
- T E Martin
- DERA Centre for Human Sciences, Farnborough, Hampshire, UK
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Abstract
MyD88, a protein implicated in interleukin-1 signaling, was localized in HeLa cells transiently transfected with an epitope-tagged (flag) version of MyD88. Overexpression of MyD88 can induce apoptosis. We have analyzed the fine structural intracellular distribution of MyD88 using immunoelectron microscopy. MyD88 is localized to the nucleus and to the cytoplasm as revealed by immunofluorescence visualization. Ultrastructural immunocytochemistry shows that, in the cytoplasm, this protein is associated with fibrillar aggregates containing beta-actin. In the nucleus, MyD88 was found in fibrillar domains present only in cells not yet displaying morphological signs of apoptosis. These domains are not derived from nucleoli and do not constitute an accumulation site of splicing factors. We suggest that such structures could be involved in the formation of the apoptotic bodies and/or in the modification of the nuclear structure and of nucleocytoplasmic trafficking during apoptosis.
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Affiliation(s)
- F Jaunin
- Center for Electron Microscopy, University of Lausanne, 27 Bugnon, Lausanne, CH-1005, Switzerland
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Storb U, Klotz EL, Hackett J, Kage K, Bozek G, Martin TE. A hypermutable insert in an immunoglobulin transgene contains hotspots of somatic mutation and sequences predicting highly stable structures in the RNA transcript. J Exp Med 1998; 188:689-98. [PMID: 9705951 PMCID: PMC2213363 DOI: 10.1084/jem.188.4.689] [Citation(s) in RCA: 48] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/1998] [Revised: 06/10/1998] [Indexed: 11/23/2022] Open
Abstract
Immunoglobulin (Ig) genes expressed in mature B lymphocytes can undergo somatic hypermutation upon cell interaction with antigen and T cells. The mutation mechanism had previously been shown to depend upon transcription initiation, suggesting that a mutator factor was loaded on an RNA polymerase initiating at the promoter and causing mutations during elongation (Peters, A., and U. Storb. 1996. Immunity. 4:57-65). To further elucidate this process we have created an artificial substrate consisting of alternating EcoRV and PvuII restriction enzyme sites (EPS) located within the variable (V) region of an Ig transgene. This substrate can easily be assayed for the presence of mutations in DNA from transgenic lymphocytes by amplifying the EPS insert and determining by restriction enzyme digestion whether any of the restriction sites have been altered. Surprisingly, the EPS insert was mutated many times more frequently than the flanking Ig sequences. In addition there were striking differences in mutability of the different nucleotides within the restriction sites. The data favor a model of somatic hypermutation where the fine specificity of the mutations is determined by nucleotide sequence preferences of a mutator factor, and where the general site of mutagenesis is determined by the pausing of the RNA polymerase due to secondary structures within the nascent RNA.
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Affiliation(s)
- U Storb
- Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, Illinois 60637, USA.
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Abstract
We review our studies on the mechanism of somatic hypermutation of immunoglobulin genes. Most experiments were carried out using Ig transgenes. We showed in these experiments that all required cis-acting elements are present within the 10-16 kb of a transgene. Only the Ig variable region and its proximate flanks are mutated, not the constant region. Several Ig gene enhancers are permissive for somatic mutation. Association of the enhancer with its natural Ig promoter is not necessary. However, the mutation process seems specific for Ig genes. No mutations were found in housekeeping genes from cells with high levels of somatic hypermutation of their Ig genes. The Ig enhancers may provide the Ig gene specificity. An exception may be the BCL6 gene, which was mutated in human but not in mouse B cells. Transcription of a region is required for its mutability. When the transcriptional promoter located upstream of the variable region is duplicated upstream of the constant region, this region also becomes mutable. This suggests a model in which a mutator factor associates with the RNA polymerase at the promoter, travels with the polymerase during elongation, and causes mutations during polymerase pausing. The DNA repair systems, nucleotide excision repair and DNA mismatch repair, are not required. Our recent data with an artificial substrate of somatic mutation suggest that pausing may be due to secondary structure of the DNA or nascent RNA, and the specific mutations to preferences of the mutator factor.
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Affiliation(s)
- U Storb
- Department of Molecular Genetics and Cell Biology, University of Chicago 60637, Illinois, USA.
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Storb U, Peters A, Klotz E, Kim N, Shen HM, Kage K, Rogerson B, Martin TE. Somatic hypermutation of immunoglobulin genes is linked to transcription. Curr Top Microbiol Immunol 1998; 229:11-9. [PMID: 9479844 DOI: 10.1007/978-3-642-71984-4_2] [Citation(s) in RCA: 27] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- U Storb
- Department of Molecular Genetics and Cell Biology, University of Chicago, IL 60637, USA
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Biggiogera M, Bottone MG, Martin TE, Uchiumi T. Still immunodetectable nuclear RNPs are extruded from the cytoplasm of spontaneously apoptotic thymocytes. Exp Cell Res 1997; 234:512-20. [PMID: 9260922 DOI: 10.1006/excr.1997.3657] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
The fate of different nuclear ribonucleoprotein (RNP) components was investigated during spontaneous apoptosis of thymocytes using specific monoclonal antibodies against snRNPs, hnRNPs, and ribosomal proteins at light and electron microscopy levels and by flow cytometry. It was found that, during apoptosis, nuclear RNP-containing structures (perichromatin granules, interchromatin granules, and perichromatin fibrils) segregate in the interchromatin space and cluster into heterogeneous aggregates of granules in which some of the structures may still be recognized morphologically. Along with the progress of apoptosis, the clusters are extruded from the nucleus into the cytoplasm, from which they are finally released via cytoplasmic extrusions. At all these stages, RNPs inside the clusters are always recognized by specific antibodies, even when they bleb out of the cell surface, thus suggesting that degradation of RNPs might be only partial during apoptosis. This could be potentially harmful in genetically susceptible subjects, as the appropriate MHC class II molecules may capture and present normally cryptic self-peptides. It is tempting to speculate that this event might have implications in the etiology of autoimmune diseases.
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Affiliation(s)
- M Biggiogera
- Dipartimento di Biologia Animale and CNR Centro di Studio per l'Istochimica, Universita' di Pavia, Italy
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Dabbert CB, Martin TE, Powell KC. Use of body measurements and serum metabolites to estimate the nutritional status of mallards wintering in the Mississippi Alluvial Valley, USA. J Wildl Dis 1997; 33:57-63. [PMID: 9027691 DOI: 10.7589/0090-3558-33.1.57] [Citation(s) in RCA: 23] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
We collected mallards (Anas platyrhynchos) from bottomland hardwood habitats on the Bayou Meto Wildlife Management Area and the White River National Wildlife Refuge, Arkansas County, Arkansas during the winter of 1990 to 1991 to determine if measures of physiological condition could be predicted from structural size, serum metabolite levels, or from direct measures of carcass composition. Serum triglyceride levels were correlated (r = 0.57, P = 0.007) with total body fat in males and slightly increased the value (from R2 = 0.64 to 0.76) of intact body mass alone for predicting total body fat in males. Overall, however, serum metabolites appeared to be poor indicators of the magnitude of nutrient masses in mallards. Three potential indices of nutritional status were developed from carcass composition data: protein/total ash, fat/ total ash, and fat/fat-free body mass. Protein masses of male mallards changed over winter (P = 0.02). Consequently, fat-free masses are not constant and represent poor indicators of structural size for mallards wintering in the Mississippi Alluvial Valley.
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Affiliation(s)
- C B Dabbert
- Arkansas Cooperative Fish and Wildlife Research Unit, Department of Biological Sciences, University of Arkansas, Fayetteville 72701, USA
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Tamburini M, Malatesta M, Zancanaro C, Martin TE, Fu XD, Vogel P, Fakan S. Dense granular bodies: a novel nucleoplasmic structure in hibernating dormice. Histochem Cell Biol 1996; 106:581-6. [PMID: 8985746 DOI: 10.1007/bf02473273] [Citation(s) in RCA: 13] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
Dense granular bodies (DGB) are particular structural constituents observed in cell nuclei of different tissues-liver, pancreas, brown adipose tissue, adrenal cortex-of hibernating dormice. They appear as strongly electron-dense clusters of closely packed granules, with thin fibrils spreading out at their periphery. DGB always occur in the nucleoplasm, sometimes making contact with other nuclear structural constituents typical of the hibernating state, such as coiled bodies, amorphous bodies and nucleoplasmic fibrils. DGB are present only during deep hibernation and rapidly disappear upon arousal from hibernation. Cytochemical and immunocytochemical analyses showed that DGB contain ribonucleoproteins and several nucleoplasmic RNA processing factors, suggesting that DGB can represent accumulation sites of splicing factors which are provided to splicing sites when normal metabolic activity is rapidly restored during arousal.
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Affiliation(s)
- M Tamburini
- Centre of Electron Microscopy, University of Lausanne, Switzerland
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Biggiogera M, Tanguay RM, Marin R, Wu Y, Martin TE, Fakan S. Localization of heat shock proteins in mouse male germ cells: an immunoelectron microscopical study. Exp Cell Res 1996; 229:77-85. [PMID: 8940251 DOI: 10.1006/excr.1996.0345] [Citation(s) in RCA: 53] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023]
Abstract
We have examined the intracellular distribution of heat shock proteins HSP27 and HSP90 by means of specific antibodies and ultrastructural immunocytochemistry in the normal mouse testis as well as after heat shock. In the unstressed testis, these heat shock proteins are present in the cytoplasm and to a lesser extent in the nucleus throughout spermatogenesis. They do not show preferential association with any specific cytoplasmic structures and are absent from mitochondria. They disappear from the cell nucleus at the stage of elongating spermatids. After heat shock (42 degrees C), both HSP90 and HSP27 increase and partly relocate to the nucleus. Similarly to the localization in unstressed cells, they are mainly associated with perichromatin fibrils and the nucleolus. Moreover, a remarkable increase in the frequency of perichromatin fibrils in Sertoli cells, spermatogonia, and primary spermatocytes is also observed upon heat shock. Finally, a sharp increase in the labeling of HSPs in chromatoid bodies of round spermatids occurs following hyperthermic treatment. Interestingly, these two HSPs are localized on nuclear structures which are actively involved in RNA synthesis and processing, suggesting that they may have protective functions in these processes in a tissue which is particularly sensitive to heat stresses.
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Affiliation(s)
- M Biggiogera
- Centre of Electron Microscopy, University of Lausanne, Switzerland
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