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Ayres NJ, Ban G, Bienstman L, Bison G, Bodek K, Bondar V, Bouillaud T, Chanel E, Chen J, Chiu PJ, Clément B, Crawford CB, Daum M, Dechenaux B, Doorenbos CB, Emmenegger S, Ferraris-Bouchez L, Fertl M, Fratangelo A, Flaux P, Goupillière D, Griffith WC, Grujic ZD, Harris PG, Kirch K, Koss PA, Krempel J, Lauss B, Lefort T, Lemière Y, Leredde A, Meier M, Menu J, Mullins DA, Naviliat-Cuncic O, Pais D, Piegsa FM, Pignol G, Quéméner G, Rawlik M, Rebreyend D, Rienäcker I, Ries D, Roccia S, Ross KU, Rozpedzik D, Saenz W, Schmidt-Wellenburg P, Schnabel A, Severijns N, Shen B, Stapf T, Svirina K, Tavakoli Dinani R, Touati S, Thorne J, Virot R, Voigt J, Wursten E, Yazdandoost N, Zejma J, Zsigmond G. The design of the n2EDM experiment: nEDM Collaboration. Eur Phys J C Part Fields 2021; 81:512. [PMID: 34720721 PMCID: PMC8550164 DOI: 10.1140/epjc/s10052-021-09298-z] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/05/2021] [Accepted: 05/30/2021] [Indexed: 06/13/2023]
Abstract
We present the design of a next-generation experiment, n2EDM, currently under construction at the ultracold neutron source at the Paul Scherrer Institute (PSI) with the aim of carrying out a high-precision search for an electric dipole moment of the neutron. The project builds on experience gained with the previous apparatus operated at PSI until 2017, and is expected to deliver an order of magnitude better sensitivity with provision for further substantial improvements. An overview is of the experimental method and setup is given, the sensitivity requirements for the apparatus are derived, and its technical design is described.
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Affiliation(s)
- N. J. Ayres
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
| | - G. Ban
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - L. Bienstman
- Institute for Nuclear and Radiation Physics, KU Leuven, 3001 Leuven, Belgium
| | - G. Bison
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - K. Bodek
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 30-348 Cracow, Poland
| | - V. Bondar
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
| | - T. Bouillaud
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - E. Chanel
- Albert Einstein Center for Fundamental Physics, University of Bern, 3012 Bern, Switzerland
| | - J. Chen
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - P.-J. Chiu
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - B. Clément
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | | | - M. Daum
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - B. Dechenaux
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - C. B. Doorenbos
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - S. Emmenegger
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
| | | | - M. Fertl
- Institute of Physics, Johannes Gutenberg University, 55128 Mainz, Germany
| | - A. Fratangelo
- Albert Einstein Center for Fundamental Physics, University of Bern, 3012 Bern, Switzerland
| | - P. Flaux
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - D. Goupillière
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - W. C. Griffith
- Department of Physics and Astronomy, University of Sussex, Falmer, Brighton, BN1 9QH UK
| | - Z. D. Grujic
- Institute of Physics Belgrade, University of Belgrade, 11080 Belgrade, Serbia
| | - P. G. Harris
- Department of Physics and Astronomy, University of Sussex, Falmer, Brighton, BN1 9QH UK
| | - K. Kirch
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - P. A. Koss
- Institute for Nuclear and Radiation Physics, KU Leuven, 3001 Leuven, Belgium
- Present Address: Fraunhofer Institute for Physical Measurement Techniques, 79110 Freiburg, Germany
| | - J. Krempel
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
| | - B. Lauss
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - T. Lefort
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - Y. Lemière
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - A. Leredde
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - M. Meier
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - J. Menu
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - D. A. Mullins
- Albert Einstein Center for Fundamental Physics, University of Bern, 3012 Bern, Switzerland
| | - O. Naviliat-Cuncic
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - D. Pais
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - F. M. Piegsa
- Albert Einstein Center for Fundamental Physics, University of Bern, 3012 Bern, Switzerland
| | - G. Pignol
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - G. Quéméner
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | - M. Rawlik
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
- Present Address: Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - D. Rebreyend
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - I. Rienäcker
- Institute for Particle Physics and Astrophysics, ETH Zürich, 8093 Zurich, Switzerland
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - D. Ries
- Department of Chemistry-TRIGA site, Johannes Gutenberg University, 55128 Mainz, Germany
| | - S. Roccia
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - K. U. Ross
- Department of Chemistry-TRIGA site, Johannes Gutenberg University, 55128 Mainz, Germany
| | - D. Rozpedzik
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 30-348 Cracow, Poland
| | - W. Saenz
- Normandie Univ, ENSICAEN, UNICAEN, CNRS/IN2P3, LPC Caen, 14000 Caen, France
| | | | - A. Schnabel
- Physikalisch Technische Bundesanstalt, Berlin, Germany
| | - N. Severijns
- Institute for Nuclear and Radiation Physics, KU Leuven, 3001 Leuven, Belgium
| | - B. Shen
- Department of Chemistry-TRIGA site, Johannes Gutenberg University, 55128 Mainz, Germany
| | - T. Stapf
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
| | - K. Svirina
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - R. Tavakoli Dinani
- Institute for Nuclear and Radiation Physics, KU Leuven, 3001 Leuven, Belgium
| | - S. Touati
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - J. Thorne
- Albert Einstein Center for Fundamental Physics, University of Bern, 3012 Bern, Switzerland
| | - R. Virot
- LPSC, Université Grenoble Alpes, CNRS/IN2P3, Grenoble, France
| | - J. Voigt
- Physikalisch Technische Bundesanstalt, Berlin, Germany
| | - E. Wursten
- Institute for Nuclear and Radiation Physics, KU Leuven, 3001 Leuven, Belgium
| | - N. Yazdandoost
- Department of Chemistry-TRIGA site, Johannes Gutenberg University, 55128 Mainz, Germany
| | - J. Zejma
- Marian Smoluchowski Institute of Physics, Jagiellonian University, 30-348 Cracow, Poland
| | - G. Zsigmond
- Paul Scherrer Institut (PSI), 5232 Villigen, Switzerland
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Vangeel EB, Pishva E, Hompes T, van den Hove D, Lambrechts D, Allegaert K, Freson K, Izzi B, Claes S. Newborn genome-wide DNA methylation in association with pregnancy anxiety reveals a potential role for GABBR1. Clin Epigenetics 2017; 9:107. [PMID: 29026448 PMCID: PMC5627482 DOI: 10.1186/s13148-017-0408-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2016] [Accepted: 09/24/2017] [Indexed: 01/11/2023] Open
Abstract
BACKGROUND There is increasing evidence for the role of prenatal stress in shaping offspring DNA methylation and disease susceptibility. In the current study, we aimed to identify genes and pathways associated with pregnancy anxiety using a genome-wide DNA methylation approach. METHODS We selected 22 versus 23 newborns from our Prenatal Early Life Stress (PELS) cohort, exposed to the lowest or highest degree of maternal pregnancy anxiety, respectively. Cord blood genome-wide DNA methylation was assayed using the HumanMethylation450 BeadChip (HM450, n = 45) and candidate gene methylation using EpiTYPER (n = 80). Cortisol levels were measured at 2, 4, and 12 months of age to test infant stress system (re)activity. RESULTS Data showed ten differentially methylated regions (DMR) when comparing newborns exposed to low versus high pregnancy anxiety scores. We validated a top DMR in the GABA-B receptor subunit 1 gene (GABBR1) revealing the association with pregnancy anxiety particularly in male newborns (most significant CpG Pearson R = 0.517, p = 0.002; average methylation Pearson R = 0.332, p = 0.039). Cord blood GABBR1 methylation was associated with infant cortisol levels in response to a routine vaccination at 4 months old. CONCLUSIONS In conclusion, our results show that pregnancy anxiety is associated with differential DNA methylation patterns in newborns and that our candidate gene GABBR1 is associated with infant hypothalamic-pituitary-adrenal axis response to a stressor. Our findings reveal a potential role for GABBR1 methylation in association with stress and provide grounds for further research.
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Affiliation(s)
- Elise Beau Vangeel
- Department of Neurosciences, Genetic Research About Stress and Psychiatry (GRASP), KU Leuven, Leuven, Belgium
- Department of Cardiovascular Sciences, Center for Molecular and Vascular Biology (CMVB), KU Leuven, Leuven, Belgium
| | - Ehsan Pishva
- Department of Psychiatry and Neuropsychology, School for Mental Health and Neuroscience, Maastricht University Medical Centre, Maastricht, The Netherlands
- University of Exeter Medical School, University of Exeter, Exeter, UK
| | - Titia Hompes
- Department of Neurosciences, Genetic Research About Stress and Psychiatry (GRASP), KU Leuven, Leuven, Belgium
- University Psychiatric Center, Leuven, Belgium
| | - Daniel van den Hove
- Department of Psychiatry and Neuropsychology, School for Mental Health and Neuroscience, Maastricht University Medical Centre, Maastricht, The Netherlands
- Department of Psychiatry, Psychosomatics and Psychotherapy, Laboratory of Translational Neuroscience, University of Wuerzburg, Wuerzburg, Germany
| | - Diether Lambrechts
- Department of Oncology, Laboratory of Translational Genetics, KU Leuven, Leuven, Belgium
- Vesalius Research Center (VRC), VIB, Leuven, Belgium
| | - Karel Allegaert
- Department of Development and Regeneration, KU Leuven, Leuven, Belgium
- Intensive Care and Department of Pediatric Surgery, Erasmus MC—Sophia’s Children’s Hospital, Rotterdam, The Netherlands
| | - Kathleen Freson
- Department of Cardiovascular Sciences, Center for Molecular and Vascular Biology (CMVB), KU Leuven, Leuven, Belgium
| | - Benedetta Izzi
- Department of Epidemiology and Prevention, IRCCS Instituto Neurologico Mediterraneo Neuromed, Pozzilli, Italy
| | - Stephan Claes
- Department of Neurosciences, Genetic Research About Stress and Psychiatry (GRASP), KU Leuven, Leuven, Belgium
- University Psychiatric Center, Leuven, Belgium
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Kuijpers LMF, Phe T, Veng CH, Lim K, Ieng S, Kham C, Fawal N, Fabre L, Le Hello S, Vlieghe E, Weill FX, Jacobs J, Peetermans WE. The clinical and microbiological characteristics of enteric fever in Cambodia, 2008-2015. PLoS Negl Trop Dis 2017; 11:e0005964. [PMID: 28931025 PMCID: PMC5624643 DOI: 10.1371/journal.pntd.0005964] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2017] [Revised: 10/02/2017] [Accepted: 09/14/2017] [Indexed: 01/21/2023] Open
Abstract
BACKGROUND Enteric fever remains a major public health problem in low resource settings and antibiotic resistance is increasing. In Asia, an increasing proportion of infections is caused by Salmonella enterica serovar Paratyphi A, which for a long time was assumed to cause a milder clinical syndrome compared to Salmonella enterica serovar Typhi. METHODOLOGY A retrospective chart review study was conducted of 254 unique cases of blood culture confirmed enteric fever who presented at a referral adult hospital in Phnom Penh, Cambodia between 2008 and 2015. Demographic, clinical and laboratory data were collected from clinical charts and antibiotic susceptibility testing was performed. Whole genome sequence analysis was performed on a subset of 121 isolates. RESULTS One-hundred-and-ninety unique patients were diagnosed with Salmonella Paratyphi A and 64 with Salmonella Typhi. In the period 2008-2012, Salmonella Paratyphi A comprised 25.5% of 47 enteric fever cases compared to 86.0% of 207 cases during 2013-2015. Presenting symptoms were identical for both serovars but higher median leukocyte counts (6.8 x 109/L vs. 6.3 x 109/L; p = 0.035) and C-reactive protein (CRP) values (47.0 mg/L vs. 36 mg/L; p = 0.034) were observed for Salmonella Typhi infections. All but one of the Salmonella Typhi isolates belonged to haplotype H58 associated with multidrug resistance (MDR) (i.e. resistance to ampicillin, chloramphenicol and co-trimoxazole).;42.9% actually displayed MDR compared to none of the Salmonella Paratyphi A isolates. Decreased ciprofloxacin susceptibility (DCS) was observed in 96.9% (62/64) of Salmonella Typhi isolates versus 11.5% (21/183) of Salmonella Paratyphi A isolates (all but one from 2015). All isolates were susceptible to azithromycin and ceftriaxone. CONCLUSIONS In Phnom Penh, Cambodia, Salmonella Paratyphi A now causes the majority of enteric fever cases and decreased susceptibility against ciprofloxacin is increasing. Overall, Salmonella Typhi was significantly more associated with MDR and DCS compared to Salmonella Paratyphi A.
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Affiliation(s)
- Laura M. F. Kuijpers
- Department of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium
- Department of Microbiology & Immunology, KU Leuven, Leuven, Belgium
- * E-mail:
| | - Thong Phe
- Sihanouk Hospital Center of HOPE, Phnom Penh, Cambodia
| | - Chhun H. Veng
- Sihanouk Hospital Center of HOPE, Phnom Penh, Cambodia
| | - Kruy Lim
- Sihanouk Hospital Center of HOPE, Phnom Penh, Cambodia
| | - Sovann Ieng
- Sihanouk Hospital Center of HOPE, Phnom Penh, Cambodia
| | - Chun Kham
- Sihanouk Hospital Center of HOPE, Phnom Penh, Cambodia
| | - Nizar Fawal
- Unité des Bactéries Pathogènes Entériques, Centre National de Référence des E. coli, Shigella et Salmonella, Institut Pasteur, Paris, France
| | - Laetitia Fabre
- Unité des Bactéries Pathogènes Entériques, Centre National de Référence des E. coli, Shigella et Salmonella, Institut Pasteur, Paris, France
| | - Simon Le Hello
- Unité des Bactéries Pathogènes Entériques, Centre National de Référence des E. coli, Shigella et Salmonella, Institut Pasteur, Paris, France
| | - Erika Vlieghe
- Department of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium
- Department of General Internal Medicine, Infectious diseases and Tropical Medicine, University Hospital Antwerp, Antwerp, Belgium
| | - François-Xavier Weill
- Unité des Bactéries Pathogènes Entériques, Centre National de Référence des E. coli, Shigella et Salmonella, Institut Pasteur, Paris, France
| | - Jan Jacobs
- Department of Clinical Sciences, Institute of Tropical Medicine, Antwerp, Belgium
- Department of Microbiology & Immunology, KU Leuven, Leuven, Belgium
| | - Willy E. Peetermans
- Department of Internal Medicine, University Hospital Leuven, Leuven, Belgium
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