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Lim JM, Jung S, In JS, Park YI, Jeong WJ. Heterologous overexpression of the cyanobacterial alcohol dehydrogenase sysr1 confers cold tolerance to the oleaginous alga Nannochloropsis salina. Front Plant Sci 2023; 14:1045917. [PMID: 36760652 PMCID: PMC9905847 DOI: 10.3389/fpls.2023.1045917] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/16/2022] [Accepted: 01/13/2023] [Indexed: 06/18/2023]
Abstract
Temperature is an important regulator of growth in algae and other photosynthetic organisms. Temperatures above or below the optimal growth temperature could cause oxidative stress to algae through accumulation of oxidizing compounds such as reactive oxygen species (ROS). Thus, algal temperature stress tolerance could be attained by enhancing oxidative stress resistance. In plants, alcohol dehydrogenase (ADH) has been implicated in cold stress tolerance, eliciting a signal for the synthesis of antioxidant enzymes that counteract oxidative damage associated with several abiotic stresses. Little is known whether temperature stress could be alleviated by ADH in algae. Here, we generated transgenic lines of the unicellular oleaginous alga Nannochloropsis salina that heterologously expressed sysr1, which encodes ADH in the cyanobacterium Synechocystis sp. PCC 6906. To drive sysr1 expression, the heat shock protein 70 (HSP70) promoter isolated from N. salina was used, as its transcript levels were significantly increased under either cold or heat stress growth conditions. When subjected to cold stress, transgenic N. salina cells were more cold-tolerant than wild-type cells, showing less ROS production but increased activity of antioxidant enzymes such as superoxide dismutase, ascorbate peroxidase, and catalase. Thus, we suggest that reinforcement of alcohol metabolism could be a target for genetic manipulation to endow algae with cold temperature stress tolerance.
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Affiliation(s)
- Jong-Min Lim
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Sokyong Jung
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Jae-Sun In
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
| | - Youn-Il Park
- Department of Biological Sciences, Chungnam National University, Daejeon, Republic of Korea
| | - Won-Joong Jeong
- Cell Factory Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, Republic of Korea
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Ryu AJ, Jeong BR, Kang NK, Jeon S, Sohn MG, Yun HJ, Lim JM, Jeong SW, Park YI, Jeong WJ, Park S, Chang YK, Jeong KJ. Safe-Harboring based novel genetic toolkit for Nannochloropsis salina CCMP1776: Efficient overexpression of transgene via CRISPR/Cas9-Mediated Knock-in at the transcriptional hotspot. Bioresour Technol 2021; 340:125676. [PMID: 34365302 DOI: 10.1016/j.biortech.2021.125676] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2021] [Revised: 07/23/2021] [Accepted: 07/24/2021] [Indexed: 06/13/2023]
Abstract
Transgene expression in microalgae can be hampered by transgene silencing and unstable expression due to position effects. To overcome this, "safe harboring" transgene expression system was established for Nannochloropsis. Initially, transformants were obtained expressing a sfGFP reporter, followed by screening for high expression of sfGFP with fluorescence-activated cell sorter (FACS). 'T1' transcriptional hotspot was identified from a mutant showing best expression of sfGFP, but did not affect growth or lipid contents. By using a Cas9 editor strain, FAD12 gene, encoding Δ12-fatty acid desaturase (FAD12), was successfully knocked-in at the T1 locus, resulting in significantly higher expression of FAD12 than those of random integration. Importantly, the "safe harbored" FAD12 transformants showed four-fold higher production of linoleic acid (LA), the product of FAD12, leading to 1.5-fold increase in eicosapentaenoic acid (EPA). This safe harboring principle provide excellent proof of the concept for successful genetic/metabolic engineering of microalgae and other organisms.
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Affiliation(s)
- Ae Jin Ryu
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea; Advanced Biomass R&D Center (ABC), KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
| | - Byeong-Ryool Jeong
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea; School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea; Single-Cell Center, Qingdao Institute of BioEnergy and Bioprocess Technology, Qingdao, Shandong 266101, China
| | - Nam Kyu Kang
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea; Advanced Biomass R&D Center (ABC), KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea; Carl. R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
| | - Seungjib Jeon
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea; Advanced Biomass R&D Center (ABC), KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
| | - Min Gi Sohn
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
| | - Hyo Jin Yun
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
| | - Jong Min Lim
- Korea Research Institute of Bioscience and Biotechnology, 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
| | - Seok Won Jeong
- Department of Biological Sciences, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, Republic of Korea
| | - Youn-Il Park
- Department of Biological Sciences, Chungnam National University, 99 Daehak-ro, Yuseong-gu, Daejeon 34134, Republic of Korea
| | - Won Joong Jeong
- Korea Research Institute of Bioscience and Biotechnology, 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
| | - Sunghoon Park
- School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan 44919, Republic of Korea
| | - Yong Keun Chang
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea; Advanced Biomass R&D Center (ABC), KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea
| | - Ki Jun Jeong
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea; Institute for the BioCentury, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
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Vinoth Arul Raj J, Praveen Kumar R, Vijayakumar B, Gnansounou E, Bharathiraja B. Modelling and process optimization for biodiesel production from Nannochloropsis salina using artificial neural network. Bioresour Technol 2021; 329:124872. [PMID: 33640695 DOI: 10.1016/j.biortech.2021.124872] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/02/2021] [Revised: 02/11/2021] [Accepted: 02/12/2021] [Indexed: 06/12/2023]
Abstract
In the present investigation, calcium oxide solid nanocatalyst derived from the egg shell and Nannochloropsis salina were used for the production of biodiesel. The morphological characteristics and functional groups of synthesized nanocatalyst was characterized by SEM and FTIR analysis. Process variables optimization for biodiesel production was studied using RSM and ANN. The R2 values for RSM and ANN was found to be 0.8751 and 0.957 which showed that the model was significantly fit with the experimental data. The maximum FAME conversion for the synthesized nanocatalyst CaO was found to be 86.1% under optimum process conditions (nanocatalyst amount: 3% (w/v); oil to methanol ratio 1:6 (v/v); reaction temperature: 60 °C; reaction time 55 min). Concentration of FAME present in biodiesel was identified by GC-MS analysis.
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Affiliation(s)
- J Vinoth Arul Raj
- Department of Biotechnology, Arunai Engineering College, Thiruvannaamalai 606603, India
| | - R Praveen Kumar
- Department of Biotechnology, Arunai Engineering College, Thiruvannaamalai 606603, India
| | - B Vijayakumar
- Vel Tech High Tech Dr. Rangarajan Dr. Sakunthala Engineering College, Chennai 600062, India
| | - Edgard Gnansounou
- Bioenergy and Energy Planning Research Group, Ecole Polytechnique Fédérale de Lausanne (EPFL), 1015 Lausanne, Switzerland
| | - B Bharathiraja
- Vel Tech High Tech Dr. Rangarajan Dr. Sakunthala Engineering College, Chennai 600062, India.
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Ryu AJ, Kang NK, Jeon S, Hur DH, Lee EM, Lee DY, Jeong BR, Chang YK, Jeong KJ. Development and characterization of a Nannochloropsis mutant with simultaneously enhanced growth and lipid production. Biotechnol Biofuels 2020; 13:38. [PMID: 32158502 PMCID: PMC7057510 DOI: 10.1186/s13068-020-01681-4] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Accepted: 02/13/2020] [Indexed: 05/24/2023]
Abstract
BACKGROUND The necessity to develop high lipid-producing microalgae is emphasized for the commercialization of microalgal biomass, which is environmentally friendly and sustainable. Nannochloropsis are one of the best industrial microalgae and have been widely studied for their lipids, including high-value polyunsaturated fatty acids (PUFAs). Many reports on the genetic and biological engineering of Nannochloropsis to improve their growth and lipid contents have been published. RESULTS We performed insertional mutagenesis in Nannochloropsis salina, and screened mutants with high lipid contents using fluorescence-activated cell sorting (FACS). We isolated a mutant, Mut68, which showed improved growth and a concomitant increase in lipid contents. Mut68 exhibited 53% faster growth rate and 34% higher fatty acid methyl ester (FAME) contents after incubation for 8 days, resulting in a 75% increase in FAME productivity compared to that in the wild type (WT). By sequencing the whole genome, we identified the disrupted gene in Mut68 that encoded trehalose-6-phosphate (T6P) synthase (TPS). TPS is composed of two domains: TPS domain and T6P phosphatase (TPP) domain, which catalyze the initial formation of T6P and dephosphorylation to trehalose, respectively. Mut68 was disrupted at the TPP domain in the C-terminal half, which was confirmed by metabolic analyses revealing a great reduction in the trehalose content in Mut68. Consistent with the unaffected N-terminal TPS domain, Mut68 showed moderate increase in T6P that is known for regulation of sugar metabolism, growth, and lipid biosynthesis. Interestingly, the metabolic analyses also revealed a significant increase in stress-related amino acids, including proline and glutamine, which may further contribute to the Mut68 phenotypes. CONCLUSION We have successfully isolated an insertional mutant showing improved growth and lipid production. Moreover, we identified the disrupted gene encoding TPS. Consistent with the disrupted TPP domain, metabolic analyses revealed a moderate increase in T6P and greatly reduced trehalose. Herein, we provide an excellent proof of concept that the selection of insertional mutations via FACS can be employed for the isolation of mutants with improved growth and lipid production. In addition, trehalose and genes encoding TPS will provide novel targets for chemical and genetic engineering, in other microalgae and organisms as well as Nannochloropsis.
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Affiliation(s)
- Ae Jin Ryu
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Advanced Biomass R&D Center (ABC), KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Nam Kyu Kang
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Present Address: Carl. R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL USA
| | - Seungjib Jeon
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Advanced Biomass R&D Center (ABC), KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Dong Hoon Hur
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Eun Mi Lee
- Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826 Republic of Korea
| | - Do Yup Lee
- Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826 Republic of Korea
| | - Byeong-ryool Jeong
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Present Address: School of Energy and Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan, 44919 Korea
- Present Address: Single-Cell Center, Qingdao Institute of BioEnergy and Bioprocess Technology (QIBEBT), Qingdao, 266101 Shandong China
| | - Yong Keun Chang
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Advanced Biomass R&D Center (ABC), KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Ki Jun Jeong
- Department of Chemical and Biomolecular Engineering, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Institute for the BioCentury, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
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Koh HG, Kang NK, Jeon S, Shin SE, Jeong BR, Chang YK. Heterologous synthesis of chlorophyll b in Nannochloropsis salina enhances growth and lipid production by increasing photosynthetic efficiency. Biotechnol Biofuels 2019; 12:122. [PMID: 31114631 PMCID: PMC6515666 DOI: 10.1186/s13068-019-1462-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Accepted: 05/04/2019] [Indexed: 05/16/2023]
Abstract
BACKGROUND Chlorophylls play important roles in photosynthesis, and thus are critical for growth and related metabolic pathways in photosynthetic organisms. They are particularly important in microalgae, emerging as the next generation feedstock for biomass and biofuels. Nannochloropsis are industrial microalgae for these purposes, but are peculiar in that they lack accessory chlorophylls. In addition, the localization of heterologous proteins to the chloroplast of Nannochloropsis has not been fully studied, due to the secondary plastid surrounded by four membranes. This study addressed questions of correct localization and functional benefits of heterologous expression of chlorophyllide a oxygenase from Chlamydomonas (CrCAO) in Nannochloropsis. RESULTS We cloned CrCAO from Chlamydomonas, which catalyzes oxidation of Chla producing Chlb, and overexpressed it in N. salina to reveal effects of the heterologous Chlb for photosynthesis, growth, and lipid production. For correct localization of CrCAO into the secondary plastid in N. salina, we added the signal-recognition sequence and the transit peptide (cloned from an endogenous chloroplast-localized protein) to the N terminus of CrCAO. We obtained two transformants that expressed CrCAO and produced Chlb. They showed improved growth under medium light (90 μmol/m2/s) conditions, and their photosynthetic efficiency was increased compared to WT. They also showed increased expression of certain photosynthetic proteins, accompanied by an increased maximum electron-transfer rate up to 15.8% and quantum yields up to 17%, likely supporting the faster growth. This improved growth resulted in increased biomass production, and more importantly lipid productivity particularly with medium light. CONCLUSIONS We demonstrated beneficial effects of heterologous expression of CrCAO in Chlb-less organism N. salina, where the newly produced Chlb enhanced photosynthesis and growth. Accordingly, transformants showed improved production of biomass and lipids, important traits of microalgae from the industrial perspectives. Our transformants are the first Nannochloropsis cells that produced Chlb in the whole evolutionary path. We also succeeded in delivering a heterologous protein into the secondary plastid for the first time in Nannochloropsis. Taken together, our data showed that manipulation of photosynthetic pigments, including Chlb, can be employed in genetic improvements of microalgae for production of biofuels and other biomaterials.
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Affiliation(s)
- Hyun Gi Koh
- Advanced Biomass R&D Center, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Nam Kyu Kang
- Advanced Biomass R&D Center, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Present Address: Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL USA
| | - Seungjib Jeon
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Sung-Eun Shin
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Present Address: LG Chem, 188 Munji-ro, Yuseong-gu, Daejeon, 34122 Republic of Korea
| | - Byeong-ryool Jeong
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Yong Keun Chang
- Advanced Biomass R&D Center, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
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Gill SS, Willette S, Dungan B, Jarvis JM, Schaub T, VanLeeuwen DM, St Hilaire R, Holguin FO. Suboptimal Temperature Acclimation Affects Kennedy Pathway Gene Expression, Lipidome and Metabolite Profile of Nannochloropsis salina during PUFA Enriched TAG Synthesis. Mar Drugs 2018; 16:E425. [PMID: 30388843 DOI: 10.3390/md16110425] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/26/2018] [Revised: 10/17/2018] [Accepted: 10/28/2018] [Indexed: 01/01/2023] Open
Abstract
In humans, dietary polyunsaturated fatty acids (PUFAs) are involved in therapeutic processes such as prevention and treatment of cardiovascular diseases, neuropsychiatric disorders, and dementia. We examined the physiology, PUFA accumulation and glycerol lipid biosynthesis in the marine microalga Nannochloropsis salina in response to constant suboptimal temperature (<20 °C). As expected, N. salina exhibited significantly reduced growth rate and photosynthetic activity compared to optimal cultivation temperature. Total fatty acid contents were not significantly elevated at reduced temperatures. Cultures grown at 5 °C had the highest quantity of eicosapentanoic acid (EPA) (C20:5n3) and the lowest growth rate. Additionally, we monitored broadband lipid composition to model the occurrence of metabolic alteration and remodeling for various lipid pools. We focused on triacylglycerol (TAG) with elevated PUFA content. TAGs with EPA at all three acyl positions were higher at a cultivation temperature of 15 °C. Furthermore, monogalactosyldiacylglycerol and digalactosyldiacylglycerol, which are polar lipids associated with chloroplast membranes, decreased with reduced cultivation temperatures. Moreover, gene expression analysis of key genes involved in Kennedy pathway for de novo TAG biosynthesis revealed bimodal variations in transcript level amongst the temperature treatments. Collectively, these results show that Nannochloropsis salina is a promising source of PUFA containing lipids.
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Koh HG, Kang NK, Kim EK, Jeon S, Shin SE, Lee B, Chang YK. Advanced multigene expression system for Nannochloropsis salina using 2A self-cleaving peptides. J Biotechnol 2018; 278:39-47. [PMID: 29715488 DOI: 10.1016/j.jbiotec.2018.04.017] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2017] [Revised: 04/25/2018] [Accepted: 04/26/2018] [Indexed: 11/19/2022]
Abstract
Even though there has been much interest in genetic engineering of microalgae, its progress has been slow due to the difficulty and limitation of available techniques. Currently, genetic modification in most microalgal strains is confined to single gene transformation. Here, a multigene expression system for the oleaginous model strain Nannochloropsis salina was developed with glycine-serine-glycine spacer linked 2A self-cleaving peptides (2A) for the first time. An efficiency test of the four most widely used 2As revealed that two different types of 2As T2A and E2A have the best performance in N. salina with a maximum cleavage rate of nearly 45%. The system was able to express the linked sequence of the selection marker shble and the fluorescence protein sfCherry with intact functions. Because 2A enabled multigene expression in the single cassette form, the use of 2A also reduced the vector size, which along with the stronger promoter resulted in a 9-fold increase in the transformation efficiency. Furthermore, confirmative screening accuracy of more than 90% was observed. Hence, the 2A applied vector system is expected to be beneficial in microalgal research field because it enables multigene expression as well as offering improved transformation and screening efficiency.
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Affiliation(s)
- Hyun Gi Koh
- Department of Chemical and Biomolecular Engineering, KAIST, Daejeon 34141, Republic of Korea.
| | - Nam Kyu Kang
- Advanced Biomass R&D Center (ABC), Daejeon 34141, Republic of Korea.
| | - Eun Kyung Kim
- Advanced Biomass R&D Center (ABC), Daejeon 34141, Republic of Korea.
| | - Seungjib Jeon
- Department of Chemical and Biomolecular Engineering, KAIST, Daejeon 34141, Republic of Korea.
| | - Sung-Eun Shin
- Department of Chemical and Biomolecular Engineering, KAIST, Daejeon 34141, Republic of Korea.
| | - Bongsoo Lee
- Department of Chemical and Biomolecular Engineering, KAIST, Daejeon 34141, Republic of Korea.
| | - Yong Keun Chang
- Department of Chemical and Biomolecular Engineering, KAIST, Daejeon 34141, Republic of Korea; Advanced Biomass R&D Center (ABC), Daejeon 34141, Republic of Korea.
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Kwon S, Kang NK, Koh HG, Shin SE, Lee B, Jeong BR, Chang YK. Enhancement of biomass and lipid productivity by overexpression of a bZIP transcription factor in Nannochloropsis salina. Biotechnol Bioeng 2017; 115:331-340. [PMID: 28976541 DOI: 10.1002/bit.26465] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2017] [Revised: 09/11/2017] [Accepted: 09/29/2017] [Indexed: 11/12/2022]
Abstract
Microalgae are considered as excellent platforms for biomaterial production that can replace conventional fossil fuel-based fuels and chemicals. Genetic engineering of microalgae is prerequisite to maximize production of materials and to reduce costs for the production. Transcription factors (TFs) are emerging as key regulators of metabolic pathways to enhance production of molecules for biofuels and other materials. TFs with the basic leucine zipper (bZIP) domain have been known as stress regulators and are associated with lipid metabolism in plants. We overexpressed a bZIP TF, NsbZIP1, in Nannochloropsis salina, and found that transformants showed enhanced growth with concomitant increase in lipid contents. The improved phenotypes were also notable under stress conditions including N limitation and high salt. To understand the mechanism underlying improved phenotypes, we analyzed expression patterns of predicted target genes involved in lipid metabolism via quantitative RT-PCR, confirming increases transcript levels. NsbZIP1 appeared to be one of type C bZIPs in plants that has been known to regulate lipid metabolism under stress. Taken together, we demonstrated that NsbZIP1 could improve both growth and lipid production, and TF engineering can serve as an excellent genetic engineering tool for production of biofuels and biomaterials in microalgae.
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Affiliation(s)
- Sohee Kwon
- Department of Chemical and Biomolecular Engineering, Daejeon, Republic of Korea
| | - Nam Kyu Kang
- Department of Chemical and Biomolecular Engineering, Daejeon, Republic of Korea
| | - Hyun Gi Koh
- Department of Chemical and Biomolecular Engineering, Daejeon, Republic of Korea
| | - Sung-Eun Shin
- Department of Chemical and Biomolecular Engineering, Daejeon, Republic of Korea
| | - Bongsoo Lee
- Department of Chemical and Biomolecular Engineering, Daejeon, Republic of Korea
| | - Byeong-Ryool Jeong
- Department of Chemical and Biomolecular Engineering, Daejeon, Republic of Korea
| | - Yong Keun Chang
- Department of Chemical and Biomolecular Engineering, Daejeon, Republic of Korea.,Advanced Biomass R&D Center (ABC), Yuseong-gu, Daejeon, Republic of Korea
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Loira N, Mendoza S, Paz Cortés M, Rojas N, Travisany D, Genova AD, Gajardo N, Ehrenfeld N, Maass A. Reconstruction of the microalga Nannochloropsis salina genome-scale metabolic model with applications to lipid production. BMC Syst Biol 2017; 11:66. [PMID: 28676050 PMCID: PMC5496344 DOI: 10.1186/s12918-017-0441-1] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/18/2016] [Accepted: 06/09/2017] [Indexed: 11/10/2022]
Abstract
Background Nannochloropsis salina (= Eustigmatophyceae) is a marine microalga which has become a biotechnological target because of its high capacity to produce polyunsaturated fatty acids and triacylglycerols. It has been used as a source of biofuel, pigments and food supplements, like Omega 3. Only some Nannochloropsis species have been sequenced, but none of them benefit from a genome-scale metabolic model (GSMM), able to predict its metabolic capabilities. Results We present iNS934, the first GSMM for N. salina, including 2345 reactions, 934 genes and an exhaustive description of lipid and nitrogen metabolism. iNS934 has a 90% of accuracy when making simple growth/no-growth predictions and has a 15% error rate in predicting growth rates in different experimental conditions. Moreover, iNS934 allowed us to propose 82 different knockout strategies for strain optimization of triacylglycerols. Conclusions iNS934 provides a powerful tool for metabolic improvement, allowing predictions and simulations of N. salina metabolism under different media and genetic conditions. It also provides a systemic view of N. salina metabolism, potentially guiding research and providing context to -omics data. Electronic supplementary material The online version of this article (doi:10.1186/s12918-017-0441-1) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Nicolás Loira
- Mathomics, Center for Mathematical Modeling, Universidad de Chile, Beauchef 851, 7th Floor, Santiago, Chile. .,Center for Genome Regulation (Fondap 15090007), Universidad de Chile, Blanco Encalada 2085, Santiago, Chile.
| | - Sebastian Mendoza
- Mathomics, Center for Mathematical Modeling, Universidad de Chile, Beauchef 851, 7th Floor, Santiago, Chile.,Center for Genome Regulation (Fondap 15090007), Universidad de Chile, Blanco Encalada 2085, Santiago, Chile
| | - María Paz Cortés
- Mathomics, Center for Mathematical Modeling, Universidad de Chile, Beauchef 851, 7th Floor, Santiago, Chile.,Center for Genome Regulation (Fondap 15090007), Universidad de Chile, Blanco Encalada 2085, Santiago, Chile.,Universidad Adolfo Ibáñez, Diagonal Las Torres 2640, Santiago, Chile
| | - Natalia Rojas
- Center for Genome Regulation (Fondap 15090007), Universidad de Chile, Blanco Encalada 2085, Santiago, Chile
| | - Dante Travisany
- Mathomics, Center for Mathematical Modeling, Universidad de Chile, Beauchef 851, 7th Floor, Santiago, Chile.,Center for Genome Regulation (Fondap 15090007), Universidad de Chile, Blanco Encalada 2085, Santiago, Chile
| | - Alex Di Genova
- Mathomics, Center for Mathematical Modeling, Universidad de Chile, Beauchef 851, 7th Floor, Santiago, Chile.,Center for Genome Regulation (Fondap 15090007), Universidad de Chile, Blanco Encalada 2085, Santiago, Chile
| | - Natalia Gajardo
- Centro de Investigación Austral Biotech, Universidad Santo Tomás, Avenida Ejercito 146, Santiago, Chile
| | - Nicole Ehrenfeld
- Centro de Investigación Austral Biotech, Universidad Santo Tomás, Avenida Ejercito 146, Santiago, Chile
| | - Alejandro Maass
- Mathomics, Center for Mathematical Modeling, Universidad de Chile, Beauchef 851, 7th Floor, Santiago, Chile.,Center for Genome Regulation (Fondap 15090007), Universidad de Chile, Blanco Encalada 2085, Santiago, Chile
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10
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Torres EM, Hess D, McNeil BT, Guy T, Quinn JC. Impact of inorganic contaminants on microalgae productivity and bioremediation potential. Ecotoxicol Environ Saf 2017; 139:367-376. [PMID: 28189778 DOI: 10.1016/j.ecoenv.2017.01.034] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Revised: 01/16/2017] [Accepted: 01/19/2017] [Indexed: 06/06/2023]
Abstract
As underdeveloped nations continue to industrialize and world population continues to increase, the need for energy, natural resources, and goods will lead to ever increasing inorganic contaminants, such as heavy metals, in various waste streams that can have damaging effects on plant life, wildlife, and human health. This work is focused on the evaluation of the potential of Nannochloropsis salina to be integrated with contaminated water sources for the concurrent production of a biofuel feedstock while providing an environmental service through bioremediation. Individual contaminants (As, Cd, Cr, Co, Cu, Pb, Ni, Hg, Se, and Zn) at various concentrations ranging from a low concentration (1X) to higher concentrations (10X, and 40X) found in contaminated systems (mine tailings, wastewater treatment plants, produced water) were introduced into growth media. Biological growth experimentation was performed in triplicate at the various contaminant concentrations and at 3 different light intensities. Results show that baseline concentrations of each contaminant slightly decreased biomass growth to between 89% and 99% of the control with the exception of Ni which dramatically reduced growth. Increased contaminant concentrations resulted in progressively lower growth rates for all contaminants tested. Lipid analysis shows most baseline contaminant concentrations slightly decrease or have minimal effects on lipid content at all light levels. Trace contaminant analysis on the biomass showed Cd, Co, Cu, Pb, and Zn were sorbed by the microalgae with minimal contaminants remaining in the growth media illustrating the effectiveness of microalgae to bioremediate these contaminants when levels are sufficiently low to not detrimentally impact productivity. The microalgae biomass was less efficient at sorption of As, Cr, Ni, and Se.
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Affiliation(s)
- Eric M Torres
- Mechanical & Aerospace Engineering, Utah State University, Logan, UT, USA
| | - Derek Hess
- Mechanical & Aerospace Engineering, Utah State University, Logan, UT, USA
| | - Brian T McNeil
- Mechanical & Aerospace Engineering, Utah State University, Logan, UT, USA
| | - Tessa Guy
- Utah Water Research Laboratory, Utah State University, Logan, UT, USA
| | - Jason C Quinn
- Mechanical Engineering, Colorado State University, Fort Collins, CO, USA.
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11
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Kang NK, Kim EK, Kim YU, Lee B, Jeong WJ, Jeong BR, Chang YK. Increased lipid production by heterologous expression of AtWRI1 transcription factor in Nannochloropsis salina. Biotechnol Biofuels 2017; 10:231. [PMID: 29046718 PMCID: PMC5635583 DOI: 10.1186/s13068-017-0919-5] [Citation(s) in RCA: 58] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/22/2017] [Accepted: 09/30/2017] [Indexed: 05/03/2023]
Abstract
BACKGROUND Genetic engineering of microalgae is necessary to produce economically feasible strains for biofuel production. Current efforts are focused on the manipulation of individual metabolic genes, but the outcomes are not sufficiently stable and/or efficient for large-scale production of biofuels and other materials. Transcription factors (TFs) are emerging as good alternatives for engineering of microalgae, not only to increase production of biomaterials but to enhance stress tolerance. Here, we investigated an AP2 type TF Wrinkled1 in Arabidopsis (AtWRI1) known as a key regulator of lipid biosynthesis in plants, and applied it to industrial microalgae, Nannochloropsis salina. RESULTS We expressed AtWRI1 TF heterologously in N. salina, named NsAtWRI1, in an effort to re-enact its key regulatory function of lipid accumulation. Stable integration AtWRI1 was confirmed by RESDA PCR, and its expression was confirmed by Western blotting using the FLAG tag. Characterizations of transformants revealed that the neutral and total lipid contents were greater in NsAtWRI1 transformants than in WT under both normal and stress conditions from day 8. Especially, total lipid contents were 36.5 and 44.7% higher in NsAtWRI1 2-3 than in WT under normal and osmotic stress condition, respectively. FAME contents of NsAtWRI1 2-3 were also increased compared to WT. As a result, FAME yield of NsAtWRI1 2-3 was increased to 768 mg/L/day, which was 64% higher than that of WT under the normal condition. We identified candidates of AtWRI1-regulated genes by searching for the presence of the AW-box in promoter regions, among which lipid metabolic genes were further analyzed by qRT-PCR. Overall, qRT-PCR results on day 1 indicated that AtWRI1 down-regulated TAGL and DAGK, and up-regulated PPDK, LPL, LPGAT1, and PDH, resulting in enhanced lipid production in NsAtWRI1 transformants from early growth phase. CONCLUSION AtWRI1 TF regulated several genes involved in lipid synthesis in N. salina, resulting in enhancement of neutral lipid and FAME production. These findings suggest that heterologous expression of AtWRI1 TF can be utilized for efficient biofuel production in industrial microalgae.
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Affiliation(s)
- Nam Kyu Kang
- Department of Chemical and Biomolecular Engineering, KAIST, 291, Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Eun Kyung Kim
- Advanced Biomass R&D Center, 291, Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Young Uk Kim
- Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125, Gwahak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Bongsoo Lee
- Department of Chemical and Biomolecular Engineering, KAIST, 291, Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Won-Joong Jeong
- Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), 125, Gwahak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Byeong-ryool Jeong
- Department of Chemical and Biomolecular Engineering, KAIST, 291, Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
| | - Yong Keun Chang
- Department of Chemical and Biomolecular Engineering, KAIST, 291, Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
- Advanced Biomass R&D Center, 291, Daehak-ro, Yuseong-gu, Daejeon, 34141 Republic of Korea
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Safafar H, Hass MZ, Møller P, Holdt SL, Jacobsen C. High-EPA Biomass from Nannochloropsis salina Cultivated in a Flat-Panel Photo-Bioreactor on a Process Water-Enriched Growth Medium. Mar Drugs 2016; 14:md14080144. [PMID: 27483291 PMCID: PMC4999905 DOI: 10.3390/md14080144] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2016] [Revised: 07/21/2016] [Accepted: 07/25/2016] [Indexed: 12/17/2022] Open
Abstract
Nannochloropsis salina was grown on a mixture of standard growth media and pre-gasified industrial process water representing effluent from a local biogas plant. The study aimed to investigate the effects of enriched growth media and cultivation time on nutritional composition of Nannochloropsis salina biomass, with a focus on eicosapentaenoic acid (EPA). Variations in fatty acid composition, lipids, protein, amino acids, tocopherols and pigments were studied and results compared to algae cultivated on F/2 media as reference. Mixed growth media and process water enhanced the nutritional quality of Nannochloropsis salina in laboratory scale when compared to algae cultivated in standard F/2 medium. Data from laboratory scale translated to the large scale using a 4000 L flat panel photo-bioreactor system. The algae growth rate in winter conditions in Denmark was slow, but results revealed that large-scale cultivation of Nannochloropsis salina at these conditions could improve the nutritional properties such as EPA, tocopherol, protein and carotenoids compared to laboratory-scale cultivated microalgae. EPA reached 44.2% ± 2.30% of total fatty acids, and α-tocopherol reached 431 ± 28 µg/g of biomass dry weight after 21 days of cultivation. Variations in chemical compositions of Nannochloropsis salina were studied during the course of cultivation. Nannochloropsis salina can be presented as a good candidate for winter time cultivation in Denmark. The resulting biomass is a rich source of EPA and also a good source of protein (amino acids), tocopherols and carotenoids for potential use in aquaculture feed industry.
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Affiliation(s)
- Hamed Safafar
- Technical University of Denmark, National Food Institute (DTU Food), Søltofts Plads, Building 221, Kongens Lyngby 2800, Denmark.
| | - Michael Z Hass
- Kalundborg Municipality, Department Development, Torvet 3A, Kalundborg 4400, Denmark.
| | - Per Møller
- Kalundborg Municipality, Department Development, Torvet 3A, Kalundborg 4400, Denmark.
| | - Susan L Holdt
- Technical University of Denmark, National Food Institute (DTU Food), Søltofts Plads, Building 221, Kongens Lyngby 2800, Denmark.
| | - Charlotte Jacobsen
- Technical University of Denmark, National Food Institute (DTU Food), Søltofts Plads, Building 221, Kongens Lyngby 2800, Denmark.
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Marudhupandi T, Sathishkumar R, Kumar TTA. Heterotrophic cultivation of Nannochloropsis salina for enhancing biomass and lipid production. ACTA ACUST UNITED AC 2016; 10:8-16. [PMID: 28352519 PMCID: PMC5040862 DOI: 10.1016/j.btre.2016.02.001] [Citation(s) in RCA: 35] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2015] [Revised: 12/30/2015] [Accepted: 02/03/2016] [Indexed: 11/29/2022]
Abstract
Response surface methodology (RSM) was used to enhance the biomass and lipid content in Nannochloropsis salina due to its economic importance. Preliminary screening results revealed that the heterotrophically cultivated N. salina with various carbon and nitrogen sources yielded higher biomass (0.91 ± 0.0035 g/L) and lipid content (37.1 ± 0.49 mg/L) than that of the photoautotrophical cultivation (0.21 ± 0.009 g/L and 22.16 ± 0.27 mg/L). Significant sources that greatly influenced on biomass and lipid content of the alga were optimized through RSM. The medium consisting of glucose (7.959 g/L), sodium acetate (1.46 g/L), peptone (7.6 g/L) and sodium thiosulphate (1.05 g/L) was found to be the optimal concentration for heterotrophic cultivation by response optimizer. Confirmation experiment results for the RSM optimized concentration yielded the biomass of 1.85 g/L and total lipid content of 48.6 mg/L. In this study, we provide with a strategy for enhancing the biomass and lipid content in N. salina.
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Affiliation(s)
- Thangapandi Marudhupandi
- Centre of Advanced Study in Marine Biology, Faculty of Marine Sciences Annamalai University, Parangipettai 608502, Tamil Nadu, India; Centre for Ocean Research, Sathyabama University, Jeppiaar Nagar, Chennai 600119, India
| | - Ramamoorthy Sathishkumar
- Centre of Advanced Study in Marine Biology, Faculty of Marine Sciences Annamalai University, Parangipettai 608502, Tamil Nadu, India
| | - Thipramalai Thankappan Ajith Kumar
- Centre of Advanced Study in Marine Biology, Faculty of Marine Sciences Annamalai University, Parangipettai 608502, Tamil Nadu, India; National Bureau of Fish Genetic Resources, Indian Council of Agriculture Research, Lucknow, Uttar Pradesh 226002, India
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14
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Fakhry EM, El Maghraby DM. Lipid accumulation in response to nitrogen limitation and variation of temperature in Nannochloropsis salina. Bot Stud 2015; 56:6. [PMID: 28510815 PMCID: PMC5432932 DOI: 10.1186/s40529-015-0085-7] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2014] [Accepted: 03/05/2015] [Indexed: 05/18/2023]
Abstract
BACKGROUND This batch study deals with the relation between lipid as well as triglyceride contents in Nannochloropsis salina and variation in culture conditions such as nitrogen concentration and temperature. RESULTS The tested parameters caused reduction in growth expressed as cell count, optical density and dry weight, as well strongly involved in lipids and triglycerides accumulation and significantly affected the lipid productivity. At the beginning of the work, the concentration of nitrogen in the medium was reduced to three quarter, half and quarter of the original f2 medium while the temperature kept constant. After that, the optimal nitrogen concentration (quarter of the original media) giving high lipid yield was tested with different temperature degrees from 15 to 35°C with five degree intervals. Although the growth was insignificantly influenced, a considerable increase in lipid and triglyceride (56.1 and 15.1% of dry weight respectively) was observed when the concentration of nitrogen in the medium was reduced to the quarter. Moreover, 59.3% lipid and 17.1% triglyceride on the basis of dry weight were obtained by the combination of 25% nitrogen concentration and 30°C. Simple regressions recommended that the interaction effect of nitrogen limitation and temperature on lipid and triglyceride accumulation was not as fundamental as for nitrogen limitation stress. CONCLUSION The degree of nitrogen availability in the combination of temperature effect has been identified as the critical determinant for the maximal production of lipid in N. salina. Nevertheless, major advances in this field can be considered by studying more stresses techniques and genetic strategies.
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Affiliation(s)
- Eman M Fakhry
- Department of Botany and Microbiology, Faculty of Science, Alexandria University, Alexandria, 21511 Egypt
| | - Dahlia M El Maghraby
- Department of Botany and Microbiology, Faculty of Science, Alexandria University, Alexandria, 21511 Egypt
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Kim TH, Suh WI, Yoo G, Mishra SK, Farooq W, Moon M, Shrivastav A, Park MS, Yang JW. Development of direct conversion method for microalgal biodiesel production using wet biomass of Nannochloropsis salina. Bioresour Technol 2015; 191:438-444. [PMID: 25827362 DOI: 10.1016/j.biortech.2015.03.033] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2015] [Revised: 03/04/2015] [Accepted: 03/06/2015] [Indexed: 06/04/2023]
Abstract
In this work, the effects of several factors, such as temperature, reaction time, and solvent and acid quantity on in situ transesterification yield of wet Nannochloropsis salina were investigated. Under equivalent total solvent volume to biomass ratio, pure alcohol showed higher yield compared to alcohol-chloroform solvent. For esterifying 200 mg of wet cells, 2 ml of methanol and 1 ml of ethanol was sufficient to complete in situ transesterification. Under temperatures of 105 °C or higher, 2.5% and 5% concentrations of sulfuric acid was able to successfully convert more than 90% of lipid within 30 min when methanol and ethanol was used as solvents respectively. Also, it was verified that the optimal condition found in small-scale experiments is applicable to larger scale using 2 L scale reactor as well.
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Affiliation(s)
- Tae-Hyoung Kim
- Department of Chemical & Biomolecular Engineering, KAIST, Daejeon 305-701, Republic of Korea
| | - William I Suh
- Advanced Biomass R&D Center, KAIST, Daejeon 305-701, Republic of Korea
| | - Gursong Yoo
- Department of Chemical & Biomolecular Engineering, KAIST, Daejeon 305-701, Republic of Korea
| | - Sanjiv K Mishra
- Advanced Biomass R&D Center, KAIST, Daejeon 305-701, Republic of Korea
| | - Wasif Farooq
- Department of Chemical & Biomolecular Engineering, KAIST, Daejeon 305-701, Republic of Korea
| | - Myounghoon Moon
- Department of Chemical & Biomolecular Engineering, KAIST, Daejeon 305-701, Republic of Korea
| | | | - Min S Park
- Department of Chemical & Biomolecular Engineering, KAIST, Daejeon 305-701, Republic of Korea; Advanced Biomass R&D Center, KAIST, Daejeon 305-701, Republic of Korea
| | - Ji-Won Yang
- Department of Chemical & Biomolecular Engineering, KAIST, Daejeon 305-701, Republic of Korea; Advanced Biomass R&D Center, KAIST, Daejeon 305-701, Republic of Korea.
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16
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Kang NK, Lee B, Shin SE, Jeon S, Park MS, Yang JW. Use of conditioned medium for efficient transformation and cost-effective cultivation of Nannochloropsis salina. Bioresour Technol 2015; 181:231-7. [PMID: 25656867 DOI: 10.1016/j.biortech.2015.01.040] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2014] [Revised: 01/08/2015] [Accepted: 01/09/2015] [Indexed: 05/09/2023]
Abstract
The oleaginous microalga Nannochloropsis sp. has been spotlighted as a promising candidate in genetic engineering research for biodiesel production. However, one of the major bottlenecks in the genetic manipulation against Nannochloropsis sp. is low transformation efficiency. Based on the idea that they grow rapidly in broth culture, the effect of conditioned medium on colonization and transformation efficiency of Nannochloropsis salina was investigated. Cells grown on agar plates with 20-40% conditioned medium produced colonies that were approximately 2.3-fold larger than cells grown without conditioned medium. More importantly, the transformation efficiency was about 2-fold greater on plates with 30% conditioned medium relative to those without conditioned medium. In addition, FAME productivity in liquid cultures with 100% conditioned medium increased up to 20% compared with cultures of control medium. These results suggest that conditioned medium can be applied for efficient transformation and cost-effective cultivation of N. salina for biodiesel production.
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Affiliation(s)
- Nam Kyu Kang
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea
| | - Bongsoo Lee
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea
| | - Sung-Eun Shin
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea
| | - Seungjib Jeon
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea
| | - Min S Park
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea; Advanced Biomass R&D Center, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea
| | - Ji-Won Yang
- Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea; Advanced Biomass R&D Center, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon 305-701, Republic of Korea.
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17
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Kang NK, Jeon S, Kwon S, Koh HG, Shin SE, Lee B, Choi GG, Yang JW, Jeong BR, Chang YK. Effects of overexpression of a bHLH transcription factor on biomass and lipid production in Nannochloropsis salina. Biotechnol Biofuels 2015; 8:200. [PMID: 26628914 PMCID: PMC4666162 DOI: 10.1186/s13068-015-0386-9] [Citation(s) in RCA: 80] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2015] [Accepted: 11/16/2015] [Indexed: 05/02/2023]
Abstract
BACKGROUND Microalgae are considered promising alternative energy sources because they consume CO2 and accumulate large amounts of lipids that can be used as biofuel. Nannochloropsis is a particularly promising microalga due to its high growth rate and lipid content, and the availability of genomic information. Transcription factors (TFs) are global regulators of biological pathways by up- or down-regulation of related genes. Among these, basic helix-loop-helix (bHLH) TFs regulate growth, development, and stress responses in plants and animals, and have been identified in microalgae. We identified two bHLH TFs in the genome of N. salina CCMP1776, NsbHLH1, and NsbHLH2, and characterized functions of NsbHLH2 that may be involved in growth and nutrient uptake. RESULTS We obtained NsbHLH2 overexpressing transformants of N. salina CCMP1776 by particle bombardment and confirmed that these were stable transformants. Quantitative real-time polymerase chain reaction (qRT-PCR) and Western blotting using antibodies against the FLAG tag that was attached at the end of the coding sequence confirmed the expression of the NsbHLH2 protein under various culture conditions. The qRT-PCR results also indicated that the endogenous and transgenic expression of NsbHLH2 was reduced under stressed conditions. Overexpression of NsbHLH2 led to increased growth rate in the early growth period, and concomitantly higher nutrient uptake, than wild type (WT). These enhanced growth and nutrient uptake resulted in increased productivities of biomass and FAME. For example, one of the transformants, NsbHLH2 3-6, showed increased biomass productivity by 36 % under the normal condition, and FAME productivity by 33 % under nitrogen limitation condition. Conclusively, the improved growth in the transformants can be associated with the enhanced nutrient uptake. We are currently assessing their potential for scale-up cultivation with positive outcomes. CONCLUSION Overexpression of NsbHLH2 led to enhanced growth rate and nutrient uptake during the early growth phase, and increased biomass and FAME productivity, especially in the later period under normal and stressed conditions. Based on these results, we postulate that NsbHLH2 can be employed for the industrial production of biodiesel from N. salina.
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Affiliation(s)
- Nam Kyu Kang
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Seungjib Jeon
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Sohee Kwon
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Hyun Gi Koh
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Sung-Eun Shin
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Bongsoo Lee
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Gang-Guk Choi
- />Advanced Biomass R&D Center, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Ji-Won Yang
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Byeong-ryool Jeong
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
| | - Yong Keun Chang
- />Department of Chemical and Biomolecular Engineering, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
- />Advanced Biomass R&D Center, KAIST, 291 Daehak-ro, Yuseong-gu, Daejeon, 305-701 Republic of Korea
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18
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Quinn JC, Hanif A, Sharvelle S, Bradley TH. Microalgae to biofuels: life cycle impacts of methane production of anaerobically digested lipid extracted algae. Bioresour Technol 2014; 171:37-43. [PMID: 25181698 DOI: 10.1016/j.biortech.2014.08.037] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2014] [Revised: 08/05/2014] [Accepted: 08/06/2014] [Indexed: 06/03/2023]
Abstract
This study presents experimental measurements of the biochemical methane production for whole and lipid extracted Nannochloropsis salina. Results show whole microalgae produced 430 cm(3)-CH4 g-volatile solids(-1) (g-VS) (σ=60), 3 times more methane than was produced by the LEA, 140 cm(3)-CH4 g-VS(-1) (σ=30). Results illustrate current anaerobic modeling efforts in microalgae to biofuel assessments are not reflecting the impact of lipid removal. On a systems level, the overestimation of methane production is shown to positively skew the environmental impact of the microalgae to biofuels process. Discussion focuses on a comparison results to those of previous anaerobic digestion studies and quantifies the corresponding change in greenhouse gas emissions of the microalgae to biofuels process based on results from this study.
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Affiliation(s)
- Jason C Quinn
- Mechanical and Aerospace Engineering, Utah State University, Logan, UT 84341, USA.
| | - Asma Hanif
- Civil and Environmental Engineering, Colorado State University, Fort Collins, CO 80521, USA
| | - Sybil Sharvelle
- Civil and Environmental Engineering, Colorado State University, Fort Collins, CO 80521, USA
| | - Thomas H Bradley
- Mechanical Engineering, Colorado State University, Fort Collins, CO 80521, USA
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19
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Dong B, Ho N, Ogden KL, Arnold RG. Cultivation of Nannochloropsis salina in municipal wastewater or digester centrate. Ecotoxicol Environ Saf 2014; 103:45-53. [PMID: 24565931 DOI: 10.1016/j.ecoenv.2014.02.001] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2013] [Revised: 01/31/2014] [Accepted: 02/03/2014] [Indexed: 06/03/2023]
Abstract
Meaningful use of biofuels for transportation depends on utilization of water from non-traditional, non-potable resources. Here it is hypothesized that (i) reclaimed wastewater or nutrient-rich side streams derived from municipal wastewater treatment are suitable for that purpose and (ii) use of those waters for algal growth can promote water quality through nutrient management. Experiments showed that metals levels in municipal wastewaters are unlikely to inhibit algal growth and lipid production, at least by metals tolerant microalgae like Nannochloropsis salina. Cells grew without inhibition in treated municipal wastewater or centrate derived from wastewater treatment at additions up to 75 percent v/v in their normal growth medium minus nitrogen and phosphorus. Although wastewater provides a suitable nutrient source for algal growth, not enough municipal wastewater is available to support a meaningful biofuels industry without efficient water recycling and nutrient recovery/reuse from spent algae.
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Affiliation(s)
- Bingfeng Dong
- Department of Chemical and Environmental Engineering, The University of Arizona, 1133 E. James E. Rogers Way, Harshbarger 108, Tucson, AZ 85721, United States.
| | - Nam Ho
- Department of Chemical and Environmental Engineering, The University of Arizona, 1133 E. James E. Rogers Way, Harshbarger 108, Tucson, AZ 85721, United States
| | - Kimberly L Ogden
- Department of Chemical and Environmental Engineering, The University of Arizona, 1133 E. James E. Rogers Way, Harshbarger 108, Tucson, AZ 85721, United States
| | - Robert G Arnold
- Department of Chemical and Environmental Engineering, The University of Arizona, 1133 E. James E. Rogers Way, Harshbarger 108, Tucson, AZ 85721, United States
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Sheets JP, Ge X, Park SY, Li Y. Effect of outdoor conditions on Nannochloropsis salina cultivation in artificial seawater using nutrients from anaerobic digestion effluent. Bioresour Technol 2013; 152:154-161. [PMID: 24291316 DOI: 10.1016/j.biortech.2013.10.115] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2013] [Revised: 10/28/2013] [Accepted: 10/30/2013] [Indexed: 06/02/2023]
Abstract
The effects of simulated outdoor seasonal climatic conditions on Nannochloropsis salina (N. salina) grown using nutrients from anaerobic digestion (AD) effluent were evaluated in this study. Under various light exposure (LE) and temperature (10-30 °C) conditions, N. salina specific growth rate (μ) was strongly affected by LE. Light availability (LA) was observed to be crucial for biomass production, with μ values of 0.038±0.013 d(-1), 0.093±0.013 d(-1), and 0.151±0.021 d(-1) for 6-h, 12-h, and 24-h LA conditions, respectively. Temperature (10-25 °C) was not significant in affecting the light dependent growth coefficient (μ/LE), indicating the suitability of culturing this strain in the Ohio climate. Cultures exposed to low illumination had significantly higher unsaturated fatty acid content than those under high illumination, with nearly 29% higher eicosapentaenoic acid (C20:5) content. Using LE and light attenuation resulted in adequate prediction of N. salina growth in a 1000 L open raceway pond.
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Affiliation(s)
- Johnathon P Sheets
- Department of Food, Agricultural and Biological Engineering, The Ohio State University/Ohio Agricultural Research and Development Center, 1680 Madison Ave., Wooster, OH 44691-4096, USA
| | - Xumeng Ge
- Department of Food, Agricultural and Biological Engineering, The Ohio State University/Ohio Agricultural Research and Development Center, 1680 Madison Ave., Wooster, OH 44691-4096, USA
| | - Stephen Y Park
- Department of Food, Agricultural and Biological Engineering, The Ohio State University/Ohio Agricultural Research and Development Center, 1680 Madison Ave., Wooster, OH 44691-4096, USA
| | - Yebo Li
- Department of Food, Agricultural and Biological Engineering, The Ohio State University/Ohio Agricultural Research and Development Center, 1680 Madison Ave., Wooster, OH 44691-4096, USA.
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21
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Schwede S, Kowalczyk A, Gerber M, Span R. Anaerobic co-digestion of the marine microalga Nannochloropsis salina with energy crops. Bioresour Technol 2013; 148:428-435. [PMID: 24071442 DOI: 10.1016/j.biortech.2013.08.157] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2013] [Revised: 08/21/2013] [Accepted: 08/23/2013] [Indexed: 06/02/2023]
Abstract
Anaerobic co-digestion of corn silage with the marine microalga Nannochloropsis salina was investigated under batch and semi-continuous conditions. Under batch conditions process stability and biogas yields significantly increased by microalgae addition. During semi-continuous long-term experiments anaerobic digestion was stable in corn silage mono- and co-digestion with the algal biomass for more than 200 days. At higher organic loading rates (4.7 kg volatile solids m(-3)d(-1)) inhibition and finally process failure occurred in corn silage mono-digestion, whereas acid and methane formation remained balanced in co-digestion. The positive influences in co-digestion can be attributed to an adjusted carbon to nitrogen ratio, enhanced alkalinity, essential trace elements and a balanced nutrient composition. The results suggest that N. salina biomass is a suitable feedstock for anaerobic co-digestion of energy crops, especially for regions with manure scarcity. Enhanced process stability may result in higher organic loading rates or lower digester volumes.
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Affiliation(s)
- Sebastian Schwede
- Ruhr-University Bochum, Institute of Thermo- and Fluid Dynamics, Universitaetsstr. 150, D-44801 Bochum, Germany.
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Schwede S, Rehman ZU, Gerber M, Theiss C, Span R. Effects of thermal pretreatment on anaerobic digestion of Nannochloropsis salina biomass. Bioresour Technol 2013; 143:505-511. [PMID: 23831893 DOI: 10.1016/j.biortech.2013.06.043] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2013] [Revised: 05/28/2013] [Accepted: 06/05/2013] [Indexed: 05/28/2023]
Abstract
The marine microalga Nannochloropsis salina was investigated as feedstock for anaerobic digestion under batch and semi-continuous conditions for the first time. Biodegradability and methane yield were low under both digestion conditions. Thermal pretreatment prior to anaerobic digestion significantly increased the methane yield from 0.2 to 0.57 m(3) kg VS(-1) under batch conditions and from 0.13 to 0.27 m(3) kg VS(-1) in semi-continuous digestion. Still, the methane yield was limited with semi-continuous feeding due to volatile fatty acid (VFA) accumulation in the digester caused by high ammonium and salt concentrations in the feedstock. Despite VFA accumulation adaption of the microorganisms to the changing conditions and high buffer capacity resulted in steady methane production. A first energy balance considering the required heat for thermal pretreatment revealed significant benefit from the pretreatment. Conversely, the high energy demand for dewatering algal cultures is one major bottleneck for industrial-scale processing of microalgae.
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Affiliation(s)
- Sebastian Schwede
- Ruhr-University Bochum, Institute of Thermo- and Fluid Dynamics, Universitaetsstr. 150, D-44801 Bochum, Germany.
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Cai T, Ge X, Park SY, Li Y. Comparison of Synechocystis sp. PCC6803 and Nannochloropsis salina for lipid production using artificial seawater and nutrients from anaerobic digestion effluent. Bioresour Technol 2013; 144:255-60. [PMID: 23876653 DOI: 10.1016/j.biortech.2013.06.101] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2013] [Revised: 06/21/2013] [Accepted: 06/24/2013] [Indexed: 05/07/2023]
Abstract
The potential use of Synechocystis sp. PCC6803 (Synechocystis sp.) for lipid production using artificial seawater (ASW) medium supplemented with anaerobic digestion effluent (ADE) was investigated and compared to marine microalgae, Nannochloropsis salina (N. salina). Synechocystis sp. showed growth rates 83% and 20% higher than N. salina at 3% and 6% ADE loading ratios, respectively, achieving the highest biomass productivity of 212 mg L(-1) d(-1) in semi-continuous cultivation. The rapid growth of Synechocystis sp. was offset by its low lipid content, resulting in lipid productivities 7-28% lower than N. salina. The lipid productivity of Synechocystis sp. may be further improved by decreasing the harvesting interval during semi-continuous cultivation. Fatty acid analysis showed that lipids extracted from Synechocystis sp. contained higher palmitic acid (60.3±2.0%) and linoleic acid (20.0±1.6%), and had a higher cetane number and oxidative stability than those from N. salina.
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Affiliation(s)
- Ting Cai
- Department of Food, Agricultural and Biological Engineering, The Ohio State University/Ohio Agricultural Research and Development Center, Wooster, OH 44691-4096, USA
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Garzon-Sanabria AJ, Ramirez-Caballero SS, Moss FEP, Nikolov ZL. Effect of algogenic organic matter (AOM) and sodium chloride on Nannochloropsis salina flocculation efficiency. Bioresour Technol 2013; 143:231-7. [PMID: 23796606 DOI: 10.1016/j.biortech.2013.05.125] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2013] [Revised: 05/29/2013] [Accepted: 05/30/2013] [Indexed: 05/06/2023]
Abstract
This study evaluates the effect of polymer molecular weight and charge density, algogenic organic matter (AOM), and salt concentration on harvesting efficiency of marine microalgae. Aluminum chloride (AlCl3), chitosan, and five synthetic cationic polymers of different molecular weights and charge density levels were used as flocculation agents. Polymer flocculation of marine microalgae was most efficient when using the highest charge density polymer (FO4990). The flocculant dosage irrespectively of the agent chemistry and charge density was affected by the amount of AOM secreted into the culture media. The presence of AOM increased the amount of required flocculant 7-fold when using synthetic cationic polymers; 10-fold with chitosan; and ~3-fold with AlCl3. Salt concentration of 5 or 35 g/L NaCl alone did not significantly affect removal efficiency, indicating that AOM were the main cause for the increased flocculant dosage requirement. The synthetic cationic polymer (FO4990) was the least expensive flocculation agent.
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