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Susi H. Alternative host shapes transmission and life-history trait correlations in a multi-host plant pathogen. Evol Appl 2024; 17:e13672. [PMID: 38468715 PMCID: PMC10925827 DOI: 10.1111/eva.13672] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Revised: 02/16/2024] [Accepted: 02/20/2024] [Indexed: 03/13/2024] Open
Abstract
Most pathogens are generalists capable of infecting multiple host species or strains. Trade-offs in performance among different hosts are expected to limit the evolution of generalism. Despite the commonness of generalism, the variation in infectivity, transmission, and trade-offs in performance among host species have rarely been studied in the wild. To understand the ecological and evolutionary drivers of multi-host pathogen infectivity and transmission potential, I studied disease severity, transmission dynamics, and infectivity variation of downy mildew pathogen Peronospora sparsa on its three host plants Rubus arcticus, R. chamaemorus, and R. saxatilis. In a survey of 20 wild and cultivated sites of the three host species, disease severity varied by host species and by host population size but not among wild and cultivated sites. To understand how alternative host presence and plant diversity affect transmission of the pathogen, I conducted a transmission experiment. In this experiment, alternative host abundance and plant diversity together modified P. sparsa transmission to trap plants. To understand how resistance to P. sparsa varies among host species and genotypes, I conducted an inoculation experiment using 10 P. sparsa strains from different locations and 20 genotypes of the three host species. Significant variation in infectivity was found among host genotypes but not among host species. When trade-offs for infectivity were tested, high infectivity in one host species correlated with high infectivity in another host species. However, when pathogen transmission-related life-history correlations were tested, a positive correlation was found in R. arcticus but not in R. saxatilis. The results suggest that host resistance may shape pathogen life-history evolution with epidemiological consequences in a multi-host pathogen.
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Affiliation(s)
- Hanna Susi
- Research Centre for Ecological Change, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental SciencesUniversity of HelsinkiHelsinkiFinland
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Catella SA, Olmsted CF, Markalanda SH, McFadden CJ, Wood CW, Kuebbing SE. A generalist nematode destabilises plant competition: no evidence for direct effects, but strong evidence for indirect effects on rhizobium abundance. New Phytol 2022; 233:2561-2572. [PMID: 34954852 DOI: 10.1111/nph.17943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2021] [Accepted: 12/06/2021] [Indexed: 06/14/2023]
Abstract
Difficulties quantifying pathogen load and mutualist abundance limit our ability to connect disease dynamics to host community ecology. For example, specific predictions about how differential pathogen load is hypothesised to drive host competitive outcomes are rarely tested. Additionally, although infection is known to affect mutualists, we rarely measure the magnitude of pathogen effects on mutualist abundance across host competitive contexts. We tested for both mechanisms in a plant-rhizobia-nematode system. We paired the legume Medicago lupulina with intraspecific and interspecific plant competitors, with and without a generalist nematode parasite Meloidogyne sp. Relative change in plant biomass was used to determine how nematode inoculation affected plant competitive outcomes. We counted nematode galls to test for direct effects of parasitism on plant competition and rhizobia nodules to test for indirect effects of nematode presence on rhizobium abundance. Parasites were destabilising despite similar nematode load across competition treatments. During interspecific compared with intraspecific competition, nematode inoculation decreased nodulation on M. lupulina, increased nodulation on Trifolium repens and had no effect on nodulation on Chamaecrista fasciculata. We found no support for hypothesised direct effects of nematode load on competitive outcomes and strong but idiosyncratic indirect effects of nematode inoculation on rhizobium abundance.
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Affiliation(s)
- Samantha A Catella
- Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA
| | - Castilleja Fallon Olmsted
- Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA
| | - Shaniya H Markalanda
- Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA
| | - Connor J McFadden
- Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA
| | - Corlett W Wood
- Department of Biology, University of Pennsylvania, 433 South University Avenue, Philadelphia, PA, 19104, USA
| | - Sara E Kuebbing
- Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA
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Caseys C, Shi G, Soltis N, Gwinner R, Corwin J, Atwell S, Kliebenstein DJ. Quantitative interactions: the disease outcome of Botrytis cinerea across the plant kingdom. G3 (Bethesda) 2021; 11:jkab175. [PMID: 34003931 PMCID: PMC8496218 DOI: 10.1093/g3journal/jkab175] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2021] [Accepted: 04/28/2021] [Indexed: 11/12/2022]
Abstract
Botrytis cinerea is a fungal pathogen that causes necrotic disease on more than a thousand known hosts widely spread across the plant kingdom. How B. cinerea interacts with such extensive host diversity remains largely unknown. To address this question, we generated an infectivity matrix of 98 strains of B. cinerea on 90 genotypes representing eight host plants. This experimental infectivity matrix revealed that the disease outcome is largely explained by variations in either the host resistance or pathogen virulence. However, the specific interactions between host and pathogen account for 16% of the disease outcome. Furthermore, the disease outcomes cluster among genotypes of a species but are independent of the relatedness between hosts. When analyzing the host specificity and virulence of B. cinerea, generalist strains are predominant. In this fungal necrotroph, specialization may happen by a loss in virulence on most hosts rather than an increase of virulence on a specific host. To uncover the genetic architecture of Botrytis host specificity and virulence, a genome-wide association study (GWAS) was performed and revealed up to 1492 genes of interest. The genetic architecture of these traits is widespread across the B. cinerea genome. The complexity of the disease outcome might be explained by hundreds of functionally diverse genes putatively involved in adjusting the infection to diverse hosts.
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Affiliation(s)
- Celine Caseys
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
| | - Gongjun Shi
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Department of Plant Pathology, North Dakota State University, Fargo, ND 58102, USA
| | - Nicole Soltis
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Plant Biology Graduate Group, University of California, Davis, Davis, CA 95616 USA
| | - Raoni Gwinner
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Embrapa Amazonia Ocidental, Manaus 69010-970, Brazil
| | - Jason Corwin
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- Department of Ecology and Evolution Biology, University of Colorado, Boulder, CO 80309-0334, USA
| | - Susanna Atwell
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
| | - Daniel J Kliebenstein
- Department of Plant Sciences, University of California, Davis, Davis, CA 95616, USA
- DynaMo Center of Excellence, University of Copenhagen, Frederiksberg C DK-1871, Denmark
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Combe M, Gozlan RE. The rise of the rosette agent in Europe: An epidemiological enigma. Transbound Emerg Dis 2018; 65:1474-1481. [PMID: 30144307 DOI: 10.1111/tbed.13001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2018] [Revised: 03/29/2018] [Accepted: 07/28/2018] [Indexed: 11/29/2022]
Abstract
International biodiversity assessments often overlook the role of emerging infectious pathogens in the decline of freshwater fish populations despite the many examples of emerging diseases in other more visible taxa on a global scale. Whilst the introduction of the rosette agent Sphaerothecum destruens in Europe remained an epidemiological enigma, recent findings have shown that this parasite arrived in Europe with the introduction of the healthy carrier Pseudorasbora parva from China nearly 60 years ago and its emergence went unnoticed for over 45 years despite its severe impact on European fish biodiversity. Recent reports on the host and pathogen phylogeny point towards an ancient host-pathogen co-evolution with direct implications on disease risk. Here, we postulate that the observed rapid population decline of native fish species following their infection with virulent strains of S. destruens has underpinned the rapid establishment of P. parva populations during the invasion process. We reviewed the existing evidence supporting the claim of an S. destruens' emergence worldwide and also suggest that the origin of the US strains is to be found among contaminated Asian Oncorhynchus tshawytscha living in sympatry with native Asian P. parva population. Finally, several important preventative steps are suggested as a way to manage the impact of S. destruens on local fish communities.
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Affiliation(s)
- Marine Combe
- ISEM, Université de Montpellier, CNRS, IRD, EPHE, Montpellier, France
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Combe M, Velvin CJ, Morris A, Garchitorena A, Carolan K, Sanhueza D, Roche B, Couppié P, Guégan JF, Gozlan RE. Global and local environmental changes as drivers of Buruli ulcer emergence. Emerg Microbes Infect 2017; 6:e21. [PMID: 28442755 PMCID: PMC5457673 DOI: 10.1038/emi.2017.7] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2016] [Revised: 01/05/2017] [Accepted: 01/09/2017] [Indexed: 11/21/2022]
Abstract
Many emerging infectious diseases are caused by generalist pathogens that infect and transmit via multiple host species with multiple dissemination routes, thus confounding the understanding of pathogen transmission pathways from wildlife reservoirs to humans. The emergence of these pathogens in human populations has frequently been associated with global changes, such as socio-economic, climate or biodiversity modifications, by allowing generalist pathogens to invade and persist in new ecological niches, infect new host species, and thus change the nature of transmission pathways. Using the case of Buruli ulcer disease, we review how land-use changes, climatic patterns and biodiversity alterations contribute to disease emergence in many parts of the world. Here we clearly show that Mycobacterium ulcerans is an environmental pathogen characterized by multi-host transmission dynamics and that its infectious pathways to humans rely on the local effects of global environmental changes. We show that the interplay between habitat changes (for example, deforestation and agricultural land-use changes) and climatic patterns (for example, rainfall events), applied in a local context, can lead to abiotic environmental changes and functional changes in local biodiversity that favor the pathogen's prevalence in the environment and may explain disease emergence.
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Affiliation(s)
- Marine Combe
- Centre IRD de Montpellier, Département Santé, UMR MIVEGEC IRD-CNRS-Université de Montpellier, 34394 Montpellier, France
| | - Camilla Jensen Velvin
- Centre IRD de Montpellier, Département Santé, UMR MIVEGEC IRD-CNRS-Université de Montpellier, 34394 Montpellier, France
| | - Aaron Morris
- The Royal Veterinary College, Department of Production and Population Health, The Royal Veterinary College, Hawkshead Lane North Mymms, Hatfield, Hertfordshire AL9 7TA, UK
| | - Andres Garchitorena
- Department of Global Health and Social Medicine, Harvard Medical School, Boston, MA 02115, USA
- PIVOT, Division of Global Health Equity, Brigham and Women's Hospital, Boston, MA 02115, USA
| | - Kevin Carolan
- Computational & Systems Biology, Rothamsted Research, Harpenden AL5 2JQ, UK
| | - Daniel Sanhueza
- Centre IRD de Montpellier, Département Santé, UMR MIVEGEC IRD-CNRS-Université de Montpellier, 34394 Montpellier, France
| | - Benjamin Roche
- UMMISCO, Département Sociétés et Mondialisation, UMI IRD-UPMC 209, 93143 Bondy, France
| | - Pierre Couppié
- Université de Guyane, EA3593 Epidémiologie des Parasitoses Tropicales, 97306 Cayenne, French Guiana, France
- Service de Dermatologie, Cayenne Hospital, rue des Flamboyant, BP 6006, 97306 Cayenne, French Guiana, France
| | - Jean-François Guégan
- Centre IRD de Montpellier, Département Santé, UMR MIVEGEC IRD-CNRS-Université de Montpellier, 34394 Montpellier, France
- Future Earth International Programme, OneHealth Global Research Project, Future Earth Montréal Hub, Montréal, QC H3H 2L3, Canada
| | - Rodolphe Elie Gozlan
- Institut de Recherche pour le Développement, Département Ecologie, Biodiversité et Fonctionnement des Ecosystemes Continentaux, UMR BOREA IRD 207, CNRS 7208, MNHN, UPMC, Muséum National d'Histoire Naturelle, 75231 Paris, France
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