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Lian L, Peng HW, Ortiz RDC, Jabbour F, Gao TG, Erst AS, Chen ZD, Wang W. Phylogeny and biogeography of Tiliacoreae (Menispermaceae), a tribe restricted to tropical rainforests. Ann Bot 2023; 131:685-695. [PMID: 36721969 PMCID: PMC10147334 DOI: 10.1093/aob/mcad023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2022] [Accepted: 01/28/2023] [Indexed: 05/20/2023]
Abstract
BACKGROUND AND AIMS Modern tropical rainforests house the highest biodiversity of Earth's terrestrial biomes and are distributed in three low-latitude areas. However, the biogeographical patterns and processes underlying the distribution of biodiversity among these three areas are still poorly known. Here, we used Tiliacoreae, a tribe of pantropical lianas with a high level of regional endemism, to provide new insights into the biogeographical relationships of tropical rainforests among different continents. METHODS Based on seven plastid and two nuclear DNA regions, we reconstructed a phylogeny for Tiliacoreae with the most comprehensive sampling ever. Within the phylogenetic framework, we then estimated divergence times and investigated the spatiotemporal evolution of the tribe. KEY RESULTS The monophyletic Tiliacoreae contain three major clades, which correspond to Neotropical, Afrotropical and Indo-Malesian/Australasian areas, respectively. Both Albertisia and Anisocycla are not monophyletic. The most recent common ancestor of Tiliacoreae occurred in Indo-Malesia, the Afrotropics and Neotropics in the early Eocene, then rapidly diverged into three major clades between 48 and 46 Ma. Three dispersals from Indo-Malesia to Australasia were inferred, one in the middle Eocene and two in the late Oligocene-late Miocene, and two dispersals from the Afrotropics to Indo-Malesia occurred in the late Eocene-Oligocene. CONCLUSIONS The three main clades of Anisocycla correspond to three distinct genera [i.e. Anisocycla sensu stricto and two new genera (Georgesia and Macrophragma)]. Epinetrum is a member of Albertisia. Our findings highlight that sea-level fluctuations and climate changes in the Cenozoic have played important roles in shaping the current distribution and endemism of Tiliacoreae, hence contributing to the knowledge on the historical biogeography of tropical rainforests on a global scale.
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Affiliation(s)
- Lian Lian
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- China National Botanical Garden, Beijing 100093, China
| | - Huan-Wen Peng
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- China National Botanical Garden, Beijing 100093, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Rosa Del C Ortiz
- Missouri Botanical Garden, 4344 Shaw Boulevard, St. Louis, MO 63110, USA
| | - Florian Jabbour
- Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum national d’Histoire naturelle, CNRS, Sorbonne Université, Université des Antilles, EPHE, 57 rue Cuvier, CP39, Paris 75005, France
| | - Tian-Gang Gao
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- China National Botanical Garden, Beijing 100093, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Andrey S Erst
- Central Siberian Botanical Garden of the Siberian Branch of Russian Academy of Sciences, Zolotodolinskaya str. 101, Novosibirsk 630090, Russia
| | - Zhi-Duan Chen
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- China National Botanical Garden, Beijing 100093, China
| | - Wei Wang
- State Key Laboratory of Systematic and Evolutionary Botany, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
- China National Botanical Garden, Beijing 100093, China
- University of Chinese Academy of Sciences, Beijing 100049, China
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Yang M, Wan T, Dai C, Zou XC, Liu F, Gong YB. Modern honey bees disrupt the pollination of an ancient gymnosperm, Gnetum luofuense. Ecology 2021; 102:e03497. [PMID: 34314038 DOI: 10.1002/ecy.3497] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/01/2021] [Revised: 05/28/2021] [Accepted: 06/10/2021] [Indexed: 11/08/2022]
Affiliation(s)
- Min Yang
- State Key Laboratory of Hybrid Rice, Department of Ecology, College of Life Sciences, Wuhan University, Wuhan, 430072, China
| | - Tao Wan
- Sino-Africa Joint Research Center, Chinese Academy of Science, Wuhan, 430074, China.,Key Laboratory of Southern Subtropical Plant Diversity, Fairy Lake Botanical Garden, Shenzhen & Chinese Academy of Science, Shenzhen, 518004, China
| | - Can Dai
- School of Resources and Environmental Science, Hubei University, Wuhan, 430062, China
| | - Xiao-Chun Zou
- State Key Laboratory of Hybrid Rice, Department of Ecology, College of Life Sciences, Wuhan University, Wuhan, 430072, China
| | - Fan Liu
- Sino-Africa Joint Research Center, Chinese Academy of Science, Wuhan, 430074, China.,Key Laboratory of Aquatic Botany and Watershed Ecology, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, 430074, China
| | - Yan-Bing Gong
- State Key Laboratory of Hybrid Rice, Department of Ecology, College of Life Sciences, Wuhan University, Wuhan, 430072, China
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Flack-Prain S, Meir P, Malhi Y, Smallman TL, Williams M. Does economic optimisation explain LAI and leaf trait distributions across an Amazon soil moisture gradient? Glob Chang Biol 2021; 27:587-605. [PMID: 32979883 DOI: 10.1111/gcb.15368] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/06/2020] [Accepted: 08/31/2020] [Indexed: 06/11/2023]
Abstract
Leaf area index (LAI) underpins terrestrial ecosystem functioning, yet our ability to predict LAI remains limited. Across Amazon forests, mean LAI, LAI seasonal dynamics and leaf traits vary with soil moisture stress. We hypothesise that LAI variation can be predicted via an optimality-based approach, using net canopy C export (NCE, photosynthesis minus the C cost of leaf growth and maintenance) as a fitness proxy. We applied a process-based terrestrial ecosystem model to seven plots across a moisture stress gradient with detailed in situ measurements, to determine nominal plant C budgets. For each plot, we then compared observations and simulations of the nominal (i.e. observed) C budget to simulations of alternative, experimental budgets. Experimental budgets were generated by forcing the model with synthetic LAI timeseries (across a range of mean LAI and LAI seasonality) and different leaf trait combinations (leaf mass per unit area, lifespan, photosynthetic capacity and respiration rate) operating along the leaf economic spectrum. Observed mean LAI and LAI seasonality across the soil moisture stress gradient maximised NCE, and were therefore consistent with optimality-based predictions. Yet, the predictive power of an optimality-based approach was limited due to the asymptotic response of simulated NCE to mean LAI and LAI seasonality. Leaf traits fundamentally shaped the C budget, determining simulated optimal LAI and total NCE. Long-lived leaves with lower maximum photosynthetic capacity maximised simulated NCE under aseasonal high mean LAI, with the reverse found for short-lived leaves and higher maximum photosynthetic capacity. The simulated leaf trait LAI trade-offs were consistent with observed distributions. We suggest that a range of LAI strategies could be equally economically viable at local level, though we note several ecological limitations to this interpretation (e.g. between-plant competition). In addition, we show how leaf trait trade-offs enable divergence in canopy strategies. Our results also allow an assessment of the usefulness of optimality-based approaches in simulating primary tropical forest functioning, evaluated against in situ data.
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Affiliation(s)
| | - Patrick Meir
- School of GeoSciences, University of Edinburgh, Edinburgh, UK
- Research School of Biology, Australian National University, Canberra, ACT, Australia
| | - Yadvinder Malhi
- Environmental Change Institute, School of Geography and the Environment, University of Oxford, Oxford, UK
| | - Thomas L Smallman
- School of GeoSciences, University of Edinburgh, Edinburgh, UK
- National Centre for Earth Observation, University of Edinburgh, Edinburgh, UK
| | - Mathew Williams
- School of GeoSciences, University of Edinburgh, Edinburgh, UK
- National Centre for Earth Observation, University of Edinburgh, Edinburgh, UK
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Rowland L, da Costa ACL, Oliveira AAR, Oliveira RS, Bittencourt PL, Costa PB, Giles AL, Sosa AI, Coughlin I, Godlee JL, Vasconcelos SS, Junior JAS, Ferreira LV, Mencuccini M, Meir P. Drought stress and tree size determine stem CO 2 efflux in a tropical forest. New Phytol 2018; 218:1393-1405. [PMID: 29397028 PMCID: PMC5969101 DOI: 10.1111/nph.15024] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2017] [Accepted: 12/22/2017] [Indexed: 05/10/2023]
Abstract
CO2 efflux from stems (CO2_stem ) accounts for a substantial fraction of tropical forest gross primary productivity, but the climate sensitivity of this flux remains poorly understood. We present a study of tropical forest CO2_stem from 215 trees across wet and dry seasons, at the world's longest running tropical forest drought experiment site. We show a 27% increase in wet season CO2_stem in the droughted forest relative to a control forest. This was driven by increasing CO2_stem in trees 10-40 cm diameter. Furthermore, we show that drought increases the proportion of maintenance to growth respiration in trees > 20 cm diameter, including large increases in maintenance respiration in the largest droughted trees, > 40 cm diameter. However, we found no clear taxonomic influence on CO2_stem and were unable to accurately predict how drought sensitivity altered ecosystem scale CO2_stem , due to substantial uncertainty introduced by contrasting methods previously employed to scale CO2_stem fluxes. Our findings indicate that under future scenarios of elevated drought, increases in CO2_stem may augment carbon losses, weakening or potentially reversing the tropical forest carbon sink. However, due to substantial uncertainties in scaling CO2_stem fluxes, stand-scale future estimates of changes in stem CO2 emissions remain highly uncertain.
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Affiliation(s)
- Lucy Rowland
- College of Life and Environmental SciencesUniversity of ExeterExeterEX4 4RJUK
| | | | | | | | | | | | | | - Azul I. Sosa
- Instituto de BiologiaUNICAMPCampinasSP13083‐970Brasil
| | - Ingrid Coughlin
- Departamento de BiologiaFFCLRPUniversidade de São PauloRibeirão PretoSP14040‐900Brasil
| | - John L. Godlee
- School of GeoSciencesUniversity of EdinburghEdinburghEH9 3FFUK
| | | | - João A. S. Junior
- Instituto de GeosciênciasUniversidade Federal do ParáBelémPA66075‐110Brasil
| | | | | | - Patrick Meir
- School of GeoSciencesUniversity of EdinburghEdinburghEH9 3FFUK
- Research School of BiologyAustralian National UniversityCanberraACT2601Australia
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Dejean A, Azémar F, Céréghino R, Leponce M, Corbara B, Orivel J, Compin A. The dynamics of ant mosaics in tropical rainforests characterized using the Self-Organizing Map algorithm. Insect Sci 2016; 23:630-637. [PMID: 25684460 DOI: 10.1111/1744-7917.12208] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 01/12/2015] [Indexed: 06/04/2023]
Abstract
Ants, the most abundant taxa among canopy-dwelling animals in tropical rainforests, are mostly represented by territorially dominant arboreal ants (TDAs) whose territories are distributed in a mosaic pattern (arboreal ant mosaics). Large TDA colonies regulate insect herbivores, with implications for forestry and agronomy. What generates these mosaics in vegetal formations, which are dynamic, still needs to be better understood. So, from empirical research based on 3 Cameroonian tree species (Lophira alata, Ochnaceae; Anthocleista vogelii, Gentianaceae; and Barteria fistulosa, Passifloraceae), we used the Self-Organizing Map (SOM, neural network) to illustrate the succession of TDAs as their host trees grow and age. The SOM separated the trees by species and by size for L. alata, which can reach 60 m in height and live several centuries. An ontogenic succession of TDAs from sapling to mature trees is shown, and some ecological traits are highlighted for certain TDAs. Also, because the SOM permits the analysis of data with many zeroes with no effect of outliers on the overall scatterplot distributions, we obtained ecological information on rare species. Finally, the SOM permitted us to show that functional groups cannot be selected at the genus level as congeneric species can have very different ecological niches, something particularly true for Crematogaster spp., which include a species specifically associated with B. fistulosa, nondominant species and TDAs. Therefore, the SOM permitted the complex relationships between TDAs and their growing host trees to be analyzed, while also providing new information on the ecological traits of the ant species involved.
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Affiliation(s)
- Alain Dejean
- CNRS, Laboratoire Écologie Fonctionnelle et Environnement (UMR-CNRS 5245), 31062, Toulouse, France
- Université de Toulouse, UPS, INP, Ecolab, 118 route de Narbonne, 31062, Toulouse, France
- Écologie des Forêts de Guyane, Campus agronomique, BP 316, 97387, Kourou cedex, France
| | - Frédéric Azémar
- CNRS, Laboratoire Écologie Fonctionnelle et Environnement (UMR-CNRS 5245), 31062, Toulouse, France
- Université de Toulouse, UPS, INP, Ecolab, 118 route de Narbonne, 31062, Toulouse, France
| | - Régis Céréghino
- CNRS, Laboratoire Écologie Fonctionnelle et Environnement (UMR-CNRS 5245), 31062, Toulouse, France
- Université de Toulouse, UPS, INP, Ecolab, 118 route de Narbonne, 31062, Toulouse, France
| | - Maurice Leponce
- Biodiversity Monitoring and Assessment Unit, Royal Belgian Institute of Natural Sciences, Rue Vautier 29, B-1000, Brussels, Belgium
| | - Bruno Corbara
- CNRS, Laboratoire Microorganismes, Génome et Environnement (UMR-CNRS 6023), Université Blaise Pascal, Complexe Scientifique des Cézeaux, 63177, Aubière cedex, France
- Clermont Université, Université Blaise Pascal, LMGE, BP 10448, F-63000, Clermont-Ferrand, France
| | - Jérôme Orivel
- Écologie des Forêts de Guyane, Campus agronomique, BP 316, 97387, Kourou cedex, France
| | - Arthur Compin
- CNRS, Laboratoire Écologie Fonctionnelle et Environnement (UMR-CNRS 5245), 31062, Toulouse, France
- Université de Toulouse, UPS, INP, Ecolab, 118 route de Narbonne, 31062, Toulouse, France
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Kakishima S, Morita S, Yoshida K, Ishida A, Hayashi S, Asami T, Ito H, Miller DG, Uehara T, Mori S, Hasegawa E, Matsuura K, Kasuya E, Yoshimura J. The contribution of seed dispersers to tree species diversity in tropical rainforests. R Soc Open Sci 2015; 2:150330. [PMID: 26587246 PMCID: PMC4632518 DOI: 10.1098/rsos.150330] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/09/2015] [Accepted: 09/17/2015] [Indexed: 06/05/2023]
Abstract
Tropical rainforests are known for their extreme biodiversity, posing a challenging problem in tropical ecology. Many hypotheses have been proposed to explain the diversity of tree species, yet our understanding of this phenomenon remains incomplete. Here, we consider the contribution of animal seed dispersers to the species diversity of trees. We built a multi-layer lattice model of trees whose animal seed dispersers are allowed to move only in restricted areas to disperse the tree seeds. We incorporated the effects of seed dispersers in the traditional theory of allopatric speciation on a geological time scale. We modified the lattice model to explicitly examine the coexistence of new tree species and the resulting high biodiversity. The results indicate that both the coexistence and diversified evolution of tree species can be explained by the introduction of animal seed dispersers.
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Affiliation(s)
- Satoshi Kakishima
- Graduate School of Science and Technology, Shizuoka University, Hamamatsu, Shizuoka 432-8561, Japan
| | - Satoru Morita
- Department of Mathematical and Systems Engineering, Shizuoka University, Hamamatsu, Shizuoka 432-8561, Japan
| | - Katsuhiko Yoshida
- Biodiversity Conservation Planning Section, Center for Environmental Biology and Ecosystem Studies, National Institute for Environmental Studies, Tsukuba, Ibaraki 305-8506, Japan
| | - Atsushi Ishida
- Center for Ecological Research, Kyoto University, Otsu, Shiga 520-2113, Japan
| | - Saki Hayashi
- Department of Mathematical and Systems Engineering, Shizuoka University, Hamamatsu, Shizuoka 432-8561, Japan
| | - Takahiro Asami
- Department of Biology, Shinshu University, Matsumoto, Nagano 390-8621, Japan
| | - Hiromu Ito
- Graduate School of Science and Technology, Shizuoka University, Hamamatsu, Shizuoka 432-8561, Japan
| | - Donald G. Miller
- Department of Biological Sciences, California State University, Chico, CA 95929, USA
| | - Takashi Uehara
- Graduate School of Science and Technology, Shizuoka University, Hamamatsu, Shizuoka 432-8561, Japan
| | - Shigeta Mori
- Department of Food, Life, and Environmental Science, Faculty of Agriculture, Yamagata University, Tsuruoka, Yamagata 997-8555, Japan
| | - Eisuke Hasegawa
- Department of Ecology and Systematics, Graduate School of Agriculture, Hokkaido University, Sapporo, Hokkaido 060-8589, Japan
| | - Kenji Matsuura
- Laboratory of Insect Ecology, Graduate School of Agriculture, Kyoto University, Kyoto 606-8502, Japan
| | - Eiiti Kasuya
- Department of Biology, Faculty of Science, Kyushu University, Fukuoka 812-8581, Japan
| | - Jin Yoshimura
- Graduate School of Science and Technology, Shizuoka University, Hamamatsu, Shizuoka 432-8561, Japan
- Department of Mathematical and Systems Engineering, Shizuoka University, Hamamatsu, Shizuoka 432-8561, Japan
- Marine Biosystems Research Center, Chiba University, Kamogawa, Chiba 299-5502, Japan
- Department of Environmental and Forest Biology, State University of New York College of Environmental Science and Forestry, Syracuse, NY 13210, USA
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Piñeiro R, Staquet A, Hardy OJ. Isolation of nuclear microsatellites in the African timber tree Lophira alata (Ochnaceae) and cross-amplification in L. lanceolata. Appl Plant Sci 2015; 3:apps1500056. [PMID: 26504680 PMCID: PMC4610311 DOI: 10.3732/apps.1500056] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 05/08/2015] [Accepted: 07/08/2015] [Indexed: 06/05/2023]
Abstract
PREMISE OF THE STUDY Microsatellite markers were isolated in the rainforest tree Lophira alata (Ochnaceae), an important timber tree from Central Africa, and cross-amplified on its savannah counterpart, L. lanceolata. METHODS AND RESULTS From a microsatellite-enriched library sequenced on a 454 GS FLX platform, 13 primer combinations were identified. Amplification was optimized in two multiplex reactions. The primers amplified di- and trinucelotide repeats, with two to seven alleles per locus. Eleven primers also amplified in L. lanceolata. CONCLUSIONS Microsatellite primers developed for the genus Lophira displayed sufficient variation to investigate hybridization between congeneric species in the rainforest-savannah transition.
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Affiliation(s)
- Rosalía Piñeiro
- Evolutionary Biology and Ecology Unit, CP 120/12, Faculté des Sciences, Université Libre de Bruxelles, Av. F. D. Roosevelt 50, B-1050 Brussels, Belgium
| | - Adrien Staquet
- Evolutionary Biology and Ecology Unit, CP 120/12, Faculté des Sciences, Université Libre de Bruxelles, Av. F. D. Roosevelt 50, B-1050 Brussels, Belgium
| | - Olivier J. Hardy
- Evolutionary Biology and Ecology Unit, CP 120/12, Faculté des Sciences, Université Libre de Bruxelles, Av. F. D. Roosevelt 50, B-1050 Brussels, Belgium
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