A Near Four-Decade Time Series Shows the Hawaiian Islands Have Been Browning Since the 1980s

The Hawaiian Islands have been identified as a global biodiversity hotspot. We examine the Normalized Difference Vegetation Index (NDVI) using Climate Data Records products (0.05 × 0.05°) to identify significant differences in NDVI between neutral El Niño-Southern Oscillation years (1984, 2019) and significant long-term changes over the entire time series (1982-2019) for the Hawaiian Islands and six land cover classes. Overall, there has been a significant decline in NDVI (i.e., browning) across the Hawaiian Islands from 1982 to 2019 with the islands of Lāna'i and Hawai'i experiencing the greatest decreases in NDVI (≥44%). All land cover classes significantly decreased in NDVI for most months, especially during the wet season month of March. Native vegetation cover across all islands also experienced significant declines in NDVI, with the leeward, southwestern side of the island of Hawai'i experiencing the greatest declines. The long-term trends in the annual total precipitation and annual mean Palmer Drought Severity Index (PDSI) for 1982-2019 on the Hawaiian Islands show significant concurrent declines. Primarily positive correlations between the native ecosystem NDVI and precipitation imply that significant decreases in precipitation may exacerbate the decrease in NDVI of native ecosystems. NDVI-PDSI correlations were primarily negative on the windward side of the islands and positive on the leeward sides, suggesting a higher sensitivity to drought for leeward native ecosystems. Multi-decadal time series and spatially explicit data for native landscapes provide natural resource managers with long-term trends and monthly changes associated with vegetation health and stability.

Late Quaternary dynamics of Arctic biota from ancient environmental genomics

During the last glacial-interglacial cycle, Arctic biotas experienced substantial climatic changes, yet the nature, extent and rate of their responses are not fully understood1-8. Here we report a large-scale environmental DNA metagenomic study of ancient plant and mammal communities, analysing 535 permafrost and lake sediment samples from across the Arctic spanning the past 50,000 years. Furthermore, we present 1,541 contemporary plant genome assemblies that were generated as reference sequences. Our study provides several insights into the long-term dynamics of the Arctic biota at the circumpolar and regional scales. Our key findings include: (1) a relatively homogeneous steppe-tundra flora dominated the Arctic during the Last Glacial Maximum, followed by regional divergence of vegetation during the Holocene epoch; (2) certain grazing animals consistently co-occurred in space and time; (3) humans appear to have been a minor factor in driving animal distributions; (4) higher effective precipitation, as well as an increase in the proportion of wetland plants, show negative effects on animal diversity; (5) the persistence of the steppe-tundra vegetation in northern Siberia enabled the late survival of several now-extinct megafauna species, including the woolly mammoth until 3.9 ± 0.2 thousand years ago (ka) and the woolly rhinoceros until 9.8 ± 0.2 ka; and (6) phylogenetic analysis of mammoth environmental DNA reveals a previously unsampled mitochondrial lineage. Our findings highlight the power of ancient environmental metagenomics analyses to advance understanding of population histories and long-term ecological dynamics.

Peatland Ecosystem Processes in the Maritime Antarctic During Warm Climates

We discovered a 50-cm-thick peat deposit near Cape Rasmussen (65.2°S), in the maritime Antarctic. To our knowledge, while aerobic ‘moss banks’ have often been examined, waterlogged ‘peatlands’ have never been described in this region before. The waterlogged system is approximately 100 m², with a shallow water table. Surface vegetation is dominated by Warnstorfia fontinaliopsis, a wet-adapted moss commonly found in the Antarctic Peninsula. Peat inception was dated at 2750 cal. BP and was followed by relatively rapid peat accumulation (~0.1 cm/year) until 2150 cal. BP. Our multi-proxy analysis then shows a 2000-year-long stratigraphic hiatus as well as the recent resurgence of peat accumulation, sometime after 1950 AD. The existence of a thriving peatland at 2700–2150 cal. BP implies regionally warm summer conditions extending beyond the mid-Holocene; this finding is corroborated by many regional records showing moss bank initiation and decreased sea ice extent during this time period. Recent peatland recovery at the study site (<50 years ago) might have been triggered by ongoing rapid warming, as the area is experiencing climatic conditions approaching those found on milder, peatland-rich sub-Antarctic islands (50–60°S). Assuming that colonization opportunities and stabilization mechanisms would allow peat to persist in Antarctica, our results suggest that longer and warmer growing seasons in the maritime Antarctic region may promote a more peatland-rich landscape in the future.

Empirical calibrated radiocarbon sampler: a tool for incorporating radiocarbon-date and calibration error into Bayesian phylogenetic analyses of ancient DNA

Studies of DNA from ancient samples provide a valuable opportunity to gain insight into past evolutionary and demographic processes. Bayesian phylogenetic methods can estimate evolutionary rates and timescales from ancient DNA sequences, with the ages of the samples acting as calibrations for the molecular clock. Sample ages are often estimated using radiocarbon dating, but the associated measurement error is rarely taken into account. In addition, the total uncertainty quantified by converting radiocarbon dates to calendar dates is typically ignored. Here, we present a tool for incorporating both of these sources of uncertainty into Bayesian phylogenetic analyses of ancient DNA. This empirical calibrated radiocarbon sampler (ECRS) integrates the age uncertainty for each ancient sequence over the calibrated probability density function estimated for its radiocarbon date and associated error. We use the ECRS to analyse three ancient DNA data sets. Accounting for radiocarbon-dating and calibration error appeared to have little impact on estimates of evolutionary rates and related parameters for these data sets. However, analyses of other data sets, particularly those with few or only very old radiocarbon dates, might be more sensitive to using artificially precise sample ages and should benefit from use of the ECRS.

Pattern of extinction of the woolly mammoth in Beringia

Extinction of the woolly mammoth in Beringia has long been subject to research and speculation. Here we use a new geo-referenced database of radiocarbon-dated evidence to show that mammoths were abundant in the open-habitat of Marine Isotope Stage 3 (∼45–30 ka). During the Last Glacial Maximum (∼25–20 ka), northern populations declined while those in interior Siberia increased. Northern mammoths increased after the glacial maximum, but declined at and after the Younger Dryas (∼12.9–11.5 ka). Remaining continental mammoths, now concentrated in the north, disappeared in the early Holocene with development of extensive peatlands, wet tundra, birch shrubland and coniferous forest. Long sympatry in Siberia suggests that humans may be best seen as a synergistic cofactor in that extirpation. The extinction of island populations occurred at ∼4 ka. Mammoth extinction was not due to a single cause, but followed a long trajectory in concert with changes in climate, habitat and human presence.

Beringian mammoths were abundant 45,000 to 30,000 years ago, but then experienced a long decline in concert with changes in climate, habitat and human presence. This study uses ¹⁴C dating to trace their spatio temporal pattern of extinction until the loss of final island populations about 4,000 years ago.

Climate change and the northern Russian treeline zone

The Russian treeline is a dynamic ecotone typified by steep gradients in summer temperature and regionally variable gradients in albedo and heat flux. The location of the treeline is largely controlled by summer temperatures and growing season length. Temperatures have responded strongly to twentieth-century global warming and will display a magnified response to future warming. Dendroecological studies indicate enhanced conifer recruitment during the twentieth century. However, conifers have not yet recolonized many areas where trees were present during the Medieval Warm period (ca AD 800-1,300) or the Holocene Thermal Maximum (HTM; ca 10,000-3,000 years ago). Reconstruction of tree distributions during the HTM suggests that the future position of the treeline due to global warming may approximate its former Holocene maximum position. An increased dominance of evergreen tree species in the northern Siberian forests may be an important difference between past and future conditions. Based on the slow rates of treeline expansion observed during the twentieth century, the presence of steep climatic gradients associated with the current Arctic coastline and the prevalence of organic soils, it is possible that rates of treeline expansion will be regionally variable and transient forest communities with species abundances different from today's may develop.

Rapid early development of circumarctic peatlands and atmospheric CH4 and CO2 variations

An analysis of 1516 radiocarbon dates demonstrates that the development of the current circumarctic peatlands began approximately 16.5 thousand years ago (ka) and expanded explosively between 12 and 8 ka in concert with high summer insolation and increasing temperatures. Their rapid development contributed to the sustained peak in CH4 and modest decline of CO2 during the early Holocene and likely contributed to CH4 and CO2 fluctuations during earlier interglacial and interstadial transitions. Given the decreased tempo of peatland initiation in the late Holocene and the transition of many from fens (which generated high levels of CH4) to ombrotrophic bogs, a neoglacial expansion of northern peatlands cannot explain the increase in atmospheric CH4 that occurred after 6 ka.

Siberian Peatlands a Net Carbon Sink and Global Methane Source Since the Early Holocene

Interpolar methane gradient (IPG) data from ice cores suggest the "switching on" of a major Northern Hemisphere methane source in the early Holocene. Extensive data from Russia's West Siberian Lowland show (i) explosive, widespread peatland establishment between 11.5 and 9 thousand years ago, predating comparable development in North America and synchronous with increased atmospheric methane concentrations and IPGs, (ii) larger carbon stocks than previously thought (70.2 Petagrams, up to approximately 26% of all terrestrial carbon accumulated since the Last Glacial Maximum), and (iii) little evidence for catastrophic oxidation, suggesting the region represents a long-term carbon dioxide sink and global methane source since the early Holocene.

Plant community and diversity change due to localized permafrost dynamics in bogs of western Canada

Localized permafrost formation and melt at the southern limit of permafrost has a large effect on boreal bog plant community structure and diversity in continental western Canada (Alberta, Saskatchewan, and Manitoba). Non-metric multidimensional scaling ordinations show that non-permafrost-affected bogs, areas currently underlain by permafrost (frost mounds), and areas of permafrost degradation (internal lawns) have distinct plant communities. Bryophytes respond more strongly than vascular plants to lengthened environmental gradients in the bogs studied. Seventy-two vascular plant and bryophyte species were found, with mean alpha diversity (species richness) similar in bogs and internal lawns (22.6 and 22.1) and lowest on frost mounds (15.6). Beta diversity (species turnover between landforms) is greater for bryophytes (4.22) than vascular plants (2.54). Comparisons within internal lawns show highly variable height above water table, community composition, and species diversity in wet communities and reduced variability as peat accumulates and converges on dry surfaces dominated by Sphagnum fuscum (Schimp.) Klinggr. Overall, localized permafrost dynamics increase bog plant diversity by 47% by introduction of unique dry, shaded (frost mound) and wet, open (internal lawn) conditions absent from non-permafrost-affected bogs, making localized permafrost bogs one of the most bryologically diverse peatland types in western Canada.Key words: peatlands, bryophytes, plant communities, non-metric multidimensional scaling ordination, permafrost, climate change.