1
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Wu M, Carballo-Jane E, Zhou H, Zafian P, Dai G, Liu M, Lao J, Kelly T, Shao D, Gorski J, Pissarnitski D, Kekec A, Chen Y, Previs SF, Scapin G, Gomez-Llorente Y, Hollingsworth SA, Yan L, Feng D, Huo P, Walford G, Erion MD, Kelley DE, Lin S, Mu J. Author Correction: Functionally selective signaling and broad metabolic benefits by novel insulin receptor partial agonists. Nat Commun 2024; 15:688. [PMID: 38263326 PMCID: PMC10805711 DOI: 10.1038/s41467-024-44938-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2024] Open
Affiliation(s)
- Margaret Wu
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | | | | | | | - Ge Dai
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | - Mindy Liu
- Merck & Co., Inc., South San Francisco, CA, 94080, USA
| | - Julie Lao
- Merck & Co., Inc., South San Francisco, CA, 94080, USA
| | - Terri Kelly
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | - Dan Shao
- Merck & Co., Inc., South San Francisco, CA, 94080, USA
| | | | | | - Ahmet Kekec
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | - Ying Chen
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | | | | | | | | | - Lin Yan
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | | | - Pei Huo
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | | | | | | | | | - James Mu
- Merck & Co., Inc., South San Francisco, CA, 94080, USA.
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2
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Li S, Pissarnitski D, Nowak T, Wleklinski M, Krska SW. Merging Late-Stage Diversification with Solid-Phase Peptide Synthesis Enabled by High-Throughput On-Resin Reaction Screening. ACS Catal 2022. [DOI: 10.1021/acscatal.1c05502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Shasha Li
- Department of Analytical R&D, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Dmitri Pissarnitski
- Department of Discovery Chemistry, Merck & Co., Inc., Kenilworth, New Jersey 07033, United States
| | - Timothy Nowak
- Department of Analytical R&D, Merck & Co., Inc., Rahway, New Jersey 07065, United States
| | - Michael Wleklinski
- Department of Discovery Chemistry, Merck & Co., Inc., Kenilworth, New Jersey 07033, United States
| | - Shane W. Krska
- Department of Discovery Chemistry, Merck & Co., Inc., Kenilworth, New Jersey 07033, United States
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3
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Wu M, Carballo-Jane E, Zhou H, Zafian P, Dai G, Liu M, Lao J, Kelly T, Shao D, Gorski J, Pissarnitski D, Kekec A, Chen Y, Previs SF, Scapin G, Gomez-Llorente Y, Hollingsworth SA, Yan L, Feng D, Huo P, Walford G, Erion MD, Kelley DE, Lin S, Mu J. Functionally selective signaling and broad metabolic benefits by novel insulin receptor partial agonists. Nat Commun 2022; 13:942. [PMID: 35177603 PMCID: PMC8854621 DOI: 10.1038/s41467-022-28561-9] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 01/17/2022] [Indexed: 01/09/2023] Open
Abstract
Insulin analogs have been developed to treat diabetes with focus primarily on improving the time action profile without affecting ligand-receptor interaction or functional selectivity. As a result, inherent liabilities (e.g. hypoglycemia) of injectable insulin continue to limit the true therapeutic potential of related agents. Insulin dimers were synthesized to investigate whether partial agonism of the insulin receptor (IR) tyrosine kinase is achievable, and to explore the potential for tissue-selective systemic insulin pharmacology. The insulin dimers induced distinct IR conformational changes compared to native monomeric insulin and substrate phosphorylation assays demonstrated partial agonism. Structurally distinct dimers with differences in conjugation sites and linkers were prepared to deliver desirable IR partial agonist (IRPA). Systemic infusions of a B29-B29 dimer in vivo revealed sharp differences compared to native insulin. Suppression of hepatic glucose production and lipolysis were like that attained with regular insulin, albeit with a distinctly shallower dose-response. In contrast, there was highly attenuated stimulation of glucose uptake into muscle. Mechanistic studies indicated that IRPAs exploit tissue differences in receptor density and have additional distinctions pertaining to drug clearance and distribution. The hepato-adipose selective action of IRPAs is a potentially safer approach for treatment of diabetes.
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MESH Headings
- Adipose Tissue/drug effects
- Adipose Tissue/metabolism
- Alloxan/administration & dosage
- Alloxan/toxicity
- Animals
- Blood Glucose/drug effects
- Blood Glucose/metabolism
- CHO Cells
- Cricetulus
- Diabetes Mellitus, Experimental/blood
- Diabetes Mellitus, Experimental/chemically induced
- Diabetes Mellitus, Experimental/drug therapy
- Diabetes Mellitus, Experimental/metabolism
- Diabetes Mellitus, Type 1/blood
- Diabetes Mellitus, Type 1/chemically induced
- Diabetes Mellitus, Type 1/drug therapy
- Diabetes Mellitus, Type 1/metabolism
- HEK293 Cells
- Humans
- Hypoglycemic Agents/pharmacology
- Hypoglycemic Agents/therapeutic use
- Insulin/pharmacology
- Insulin/therapeutic use
- Lipolysis/drug effects
- Liver/drug effects
- Liver/metabolism
- Male
- Mice
- Rats
- Receptor, Insulin/agonists
- Recombinant Proteins/pharmacology
- Recombinant Proteins/therapeutic use
- Signal Transduction/drug effects
- Swine
- Swine, Miniature
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Affiliation(s)
- Margaret Wu
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | | | | | | | - Ge Dai
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | - Mindy Liu
- Merck & Co., Inc., South San Francisco, CA, 94080, USA
| | - Julie Lao
- Merck & Co., Inc., South San Francisco, CA, 94080, USA
| | - Terri Kelly
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | - Dan Shao
- Merck & Co., Inc., South San Francisco, CA, 94080, USA
| | | | | | - Ahmet Kekec
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | - Ying Chen
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | | | | | | | | | - Lin Yan
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | | | - Pei Huo
- Merck & Co., Inc., Kenilworth, NJ, 07033, USA
| | | | | | | | | | - James Mu
- Merck & Co., Inc., South San Francisco, CA, 94080, USA.
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4
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Mandal M, Buevich A, Caldwell JP, Hyde L, Huang X, Liu X, McKittrick B, Mazzola RD, Pissarnitski D, Palani A, Zhang L, Parker E, Xiao L, Rindgen D, Zhu Z. Generation of Leads for γ-Secretase Modulation. J Med Chem 2020; 63:8216-8230. [DOI: 10.1021/acs.jmedchem.0c00446] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Mihirbaran Mandal
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Alexei Buevich
- Department of NMR Structure Elucidation, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - John P. Caldwell
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Lynn Hyde
- Department of Neuroscience, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Xianhai Huang
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Xiaoxiang Liu
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Brian McKittrick
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Robert D. Mazzola
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Dmitri Pissarnitski
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Anandan Palani
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Lili Zhang
- Department of Neuroscience, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Eric Parker
- Department of Neuroscience, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Li Xiao
- Department of Modeling and Informatics, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Diane Rindgen
- Department of Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Zhaoning Zhu
- Department of Medicinal Chemistry, Merck & Co., Inc., 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
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5
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Falk BT, Liang Y, Bailly M, Raoufi F, Kekec A, Pissarnitski D, Feng D, Yan L, Lin S, Fayadat-Dilman L, McCoy MA. NMR Assessment of Therapeutic Peptides and Proteins: Correlations That Reveal Interactions and Motions. Chembiochem 2019; 21:315-319. [PMID: 31283075 DOI: 10.1002/cbic.201900296] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2019] [Revised: 06/20/2019] [Indexed: 11/09/2022]
Abstract
NMR measurements of rotational and translational diffusion are used to characterize the solution behavior of a wide variety of therapeutic proteins and peptides. The timescales of motions sampled in these experiments reveal complicated intrinsic solution behavior such as flexibility, that is central to function, as well as self-interactions, stress-induced conformational changes and other critical attributes that can be discovery and development liabilities. Trends from proton transverse relaxation (R2 ) and hydrodynamic radius (Rh ) are correlated and used to identify and differentiate intermolecular from intramolecular interactions. In this study, peptide behavior is consistent with complicated multimer self-assembly, while multi-domain protein behavior is dominated by intramolecular interactions. These observations are supplemented by simulations that include effects from slow transient interactions and rapid internal motions. R2 -Rh correlations provide a means to profile protein motions as well as interactions. The approach is completely general and can be applied to therapeutic and target protein characterization.
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Affiliation(s)
- Bradley T Falk
- Mass Spectrometry and Biophysics, Merck & Co., Inc., 2000 Galloping Hill Road, Kenilworth, NJ, 07033, USA
| | - Yingkai Liang
- Discovery Pharmaceutical Sciences, Merck & Co., Inc., 770 Sunneytown Pike, West Point, PA, 19486, USA
| | - Marc Bailly
- Protein Sciences, Merck & Co., Inc., 901 California Avenue, Palo Alto, CA, 94304, USA
| | - Fahimeh Raoufi
- Protein Sciences, Merck & Co., Inc., 901 California Avenue, Palo Alto, CA, 94304, USA
| | - Ahmet Kekec
- Discovery Chemistry, Merck & Co., Inc., 2000 Galloping Hill Road, Kenilworth, NJ, 07033, USA
| | - Dmitri Pissarnitski
- Discovery Chemistry, Merck & Co., Inc., 2000 Galloping Hill Road, Kenilworth, NJ, 07033, USA
| | - Dennis Feng
- Discovery Chemistry, Merck & Co., Inc., 2000 Galloping Hill Road, Kenilworth, NJ, 07033, USA
| | - Lin Yan
- Discovery Chemistry, Merck & Co., Inc., 2000 Galloping Hill Road, Kenilworth, NJ, 07033, USA
| | - Songnian Lin
- Discovery Chemistry, Merck & Co., Inc., 2000 Galloping Hill Road, Kenilworth, NJ, 07033, USA
| | | | - Mark A McCoy
- Mass Spectrometry and Biophysics, Merck & Co., Inc., 2000 Galloping Hill Road, Kenilworth, NJ, 07033, USA
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6
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Boga SB, Krska SW, Lin S, Pissarnitski D, Yan L, Kekec A, Tang W, Pierson NA, Strulson CA, Streckfuss E, Zhu X, Zhang X, Kelly T, Parish CA. Site-Selective Synthesis of Insulin Azides and Bioconjugates. Bioconjug Chem 2019; 30:1127-1132. [PMID: 30946565 DOI: 10.1021/acs.bioconjchem.9b00069] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
A synthetic method to access novel azido-insulin analogs directly from recombinant human insulin (RHI) was developed via diazo-transfer chemistry using imidazole-1-sulfonyl azide. Systematic optimization of reaction conditions led to site-selective azidation of amino acids B1-phenylalanine and B29-lysine present in RHI. Subsequently, the azido-insulin analogs were used in azide-alkyne [3 + 2] cycloaddition reactions to synthesize a diverse array of triazole-based RHI bioconjugates that were found to be potent human insulin receptor binders. The utility of this method was further demonstrated by the concise and controlled synthesis of a heterotrisubstituted insulin conjugate.
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Affiliation(s)
- Sobhana Babu Boga
- Chemistry Capabilities for Accelerating Therapeutics , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Shane W Krska
- Chemistry Capabilities for Accelerating Therapeutics , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Songnian Lin
- Chemistry Capabilities for Accelerating Therapeutics , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Dmitri Pissarnitski
- Chemistry Capabilities for Accelerating Therapeutics , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Lin Yan
- Chemistry Capabilities for Accelerating Therapeutics , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Ahmet Kekec
- Chemistry Capabilities for Accelerating Therapeutics , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Weijuan Tang
- Analytical Research & Development , Merck & Co., Inc. , Rahway , New Jersey 07065 , United States
| | - Nicholas A Pierson
- Analytical Research & Development , Merck & Co., Inc. , Rahway , New Jersey 07065 , United States
| | - Christopher A Strulson
- Analytical Research & Development , Merck & Co., Inc. , Rahway , New Jersey 07065 , United States
| | - Eric Streckfuss
- Discovery Chemistry , Merck & Co., Inc. , West Point , Pennsylvania 19486 , United States
| | - Xiaohong Zhu
- Chemistry Capabilities for Accelerating Therapeutics , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Xiaoping Zhang
- Screening, Target and Compound Profiling , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Terri Kelly
- Screening, Target and Compound Profiling , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
| | - Craig A Parish
- Chemistry Capabilities for Accelerating Therapeutics , Merck & Co., Inc. , Kenilworth , New Jersey 07033 , United States
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7
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Wu WL, Hao J, Domalski M, Burnett DA, Pissarnitski D, Zhao Z, Stamford A, Scapin G, Gao YD, Soriano A, Kelly TM, Yao Z, Powles MA, Chen S, Mei H, Hwa J. Discovery of Novel Tricyclic Heterocycles as Potent and Selective DPP-4 Inhibitors for the Treatment of Type 2 Diabetes. ACS Med Chem Lett 2016; 7:498-501. [PMID: 27190600 DOI: 10.1021/acsmedchemlett.6b00027] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2016] [Accepted: 03/12/2016] [Indexed: 11/30/2022] Open
Abstract
In our efforts to develop second generation DPP-4 inhibitors, we endeavored to identify distinct structures with long-acting (once weekly) potential. Taking advantage of X-ray cocrystal structures of sitagliptin and other DPP-4 inhibitors, such as alogliptin and linagliptin bound to DPP-4, and aided by molecular modeling, we designed several series of heterocyclic compounds as initial targets. During their synthesis, an unexpected chemical transformation provided a novel tricyclic scaffold that was beyond our original design. Capitalizing on this serendipitous discovery, we have elaborated this scaffold into a very potent and selective DPP-4 inhibitor lead series, as highlighted by compound 17c.
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Affiliation(s)
- Wen-Lian Wu
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Jinsong Hao
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Martin Domalski
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Duane A. Burnett
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Dmitri Pissarnitski
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Zhiqiang Zhao
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Andrew Stamford
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Giovanna Scapin
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Ying-Duo Gao
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Aileen Soriano
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Terri M. Kelly
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Zuliang Yao
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Mary Ann Powles
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Shiying Chen
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Hong Mei
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
| | - Joyce Hwa
- Department of Lead Optimization Chemistry, ∥Department of Structural Chemistry, ‡Department of Pharmacology, and §Department of
Pharmacokinetics, Pharmacodynamics, and Drug Metabolism, Merck Research Laboratories, 2015 Galloping Hill Road, Kenilworth, New Jersey 07033, United States
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8
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Girijavallabhan V, Arasappan A, Bennett F, Chen K, Dang Q, Huang Y, Kerekes A, Nair L, Pissarnitski D, Verma V, Alvarez C, Chen P, Cole D, Esposite S, Huang Y, Hong Q, Liu Z, Pan W, Pu H, Rossman R, Truong Q, Vibulbhan B, Wang J, Zhao Z, Olsen D, Stamford A, Bogen S, Njoroge FG. 2'-Modified Guanosine Analogs for the Treatment of HCV. Nucleosides Nucleotides Nucleic Acids 2016; 35:277-94. [PMID: 27104963 DOI: 10.1080/15257770.2016.1154968] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Novel 2'-modified guanosine nucleosides were synthesized from inexpensive starting materials in 7-10 steps via hydroazidation or hydrocyanation reactions of the corresponding 2'-olefin. The antiviral effectiveness of the guanosine nucleosides was evaluated by converting them to the corresponding 5'-O-triphosphates (compounds 38-44) and testing their biochemical inhibitory activity against the wild-type NS5B polymerase.
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Affiliation(s)
| | | | - Frank Bennett
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Kevin Chen
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Qun Dang
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Ying Huang
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Angela Kerekes
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Latha Nair
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | | | - Vishal Verma
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Carmen Alvarez
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Ping Chen
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - David Cole
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Sara Esposite
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Yuhua Huang
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Qingmei Hong
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Zhidan Liu
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Weidong Pan
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Haiyan Pu
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | | | - Quang Truong
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | | | - Jun Wang
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - Zhiqiang Zhao
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | - David Olsen
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
| | | | - Stephane Bogen
- a Merck Research Laboratories , Kenilworth , NJ 07033 , USA
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9
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Li H, Qin J, Dhondi P, Zhou W, Vicarel M, Bara T, Cole D, Josien H, Pissarnitski D, Zhu Z, Palani A, Aslanian R, Clader J, Czarniecki M, Greenlee W, Cohen-Williams M, Hyde L, Song L, Zhang L, Chu I, Huang X. The discovery of fused oxadiazepines as gamma secretase modulators for treatment of Alzheimer’s disease. Bioorg Med Chem Lett 2013; 23:466-71. [DOI: 10.1016/j.bmcl.2012.11.055] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2012] [Revised: 11/10/2012] [Accepted: 11/14/2012] [Indexed: 11/28/2022]
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10
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Huang X, Zhou W, Liu X, Li H, Sun G, Mandal M, Vicarel M, Zhu X, Bennett C, McCraken T, Pissarnitski D, Zhao Z, Cole D, Gallo G, Zhu Z, Palani A, Aslanian R, Clader J, Czarniecki M, Greenlee W, Burnett D, Cohen-Williams M, Hyde L, Song L, Zhang L, Chu I, Buevich A. Synthesis and SAR Studies of Fused Oxadiazines as γ-Secretase Modulators for Treatment of Alzheimer's Disease. ACS Med Chem Lett 2012; 3:931-5. [PMID: 24900409 DOI: 10.1021/ml300209g] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2012] [Accepted: 09/04/2012] [Indexed: 01/18/2023] Open
Abstract
Fused oxadiazines (3) were discovered as selective and orally bioavailable γ-secretase modulators (GSMs) based on the structural framework of oxadiazoline GSMs. Although structurally related, initial modifications showed that structure-activity relationships (SARs) did not translate from the oxadiazoline to the oxadiazine series. Subsequent SAR studies on modifications at the C3 and C4 positions of the fused oxadiazine core helped to identify GSMs such as compounds 8r and 8s that were highly efficacious in vitro and in vivo in a number of animal models with highly desirable physical and pharmacological properties. Further improvements of in vitro activity and selectivity were achieved by the preparation of fused morpholine oxadiazines. The shift in specificity of APP cleavage rather than a reduction in overall γ-secretase activity and the lack of changes in substrate accumulation and Notch processing as observed in the animal studies of compound 8s confirm that the oxadiazine series of compounds are potent GSMs.
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Affiliation(s)
- Xianhai Huang
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Wei Zhou
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Xiaoxiang Liu
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Hongmei Li
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - George Sun
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Mihirbaran Mandal
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Monica Vicarel
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Xiaohong Zhu
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Chad Bennett
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Troy McCraken
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Dmitri Pissarnitski
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Zhiqiang Zhao
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - David Cole
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Gioconda Gallo
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Zhaoning Zhu
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Anandan Palani
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Robert Aslanian
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - John Clader
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Michael Czarniecki
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - William Greenlee
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Duane Burnett
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Mary Cohen-Williams
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Lynn Hyde
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Lixin Song
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Lili Zhang
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Inhou Chu
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
| | - Alexei Buevich
- Department
of Medicinal Chemistry, ‡Department of In Vitro Biology, §Department of In Vivo Biology, ∥Drug Metabolism, and ⊥Structual Elucidation, Merck Research Laboratory, 126 East
Lincoln Avenue, Rahway, New Jersey 07065, United States
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Huang X, Pissarnitski D, Li H, Asberom T, Josien H, Zhu X, Vicarel M, Zhao Z, Rajagopalan M, Palani A, Aslanian R, Zhu Z, Greenlee W, Buevich A. Efficient synthesis and reaction pathway studies of novel fused morpholine oxadiazolines for use as gamma secretase modulators. Tetrahedron Lett 2012. [DOI: 10.1016/j.tetlet.2012.09.070] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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12
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Xu R, Cole D, Asberom T, Bara T, Bennett C, Burnett DA, Clader J, Domalski M, Greenlee WJ, Hyde L, Josien H, Li H, McBriar M, McKittrick B, Pissarnitski D, Qiang L, Rajagopalan M, Sasikumar T, Su J, Tang H, Wu WL, Zhang L, Zhao Z. SAR of tricyclic sulfones as γ-secretase inhibitors. Sci China Chem 2011. [DOI: 10.1007/s11426-011-4388-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
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13
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Pissarnitski D. Advances in gamma-secretase modulation. Curr Opin Drug Discov Devel 2007; 10:392-402. [PMID: 17659480] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Inhibition of the production of insoluble amyloid-Beta (ABeta) is a widely pursued strategy for the treatment of Alzheimer's disease (AD). The final step in the generation of ABeta from the amyloid precursor protein (APP) involves cleavage by gamma-secretase, and gamma-secretase inhibitors (GSIs) have been shown to reduce the amyloid burden in animal models of AD. Unfortunately, GSIs also cause inhibition of the cleavage of other gamma-secretase substrates, including Notch, while the co-inhibition of Notch processing by GSIs in animal studies was observed to result in a gamut of side effects. A new class of compounds, known as gamma-secretase modulators (GSMs), inhibit the amyloidogenic function of gamma-secretase without interfering in the processing of Notch and other substrates. While the exact reason for the selectivity of these agents remains unclear, they are thought to intervene at an allosteric site on gamma-secretase and cause a shift of the preferred APP cleavage site so that shorter, more soluble peptides (eg, ABeta(38)) are produced instead of the highly insoluble ABeta(42). This review describes the history of the discovery of GSMs and the current medicinal chemistry efforts aimed at providing clinically useful GSM compounds.
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Affiliation(s)
- Dmitri Pissarnitski
- Schering-Plough Research Institute, 2015 Galloping Hill Road, Kenilworth, NJ 07033, USA.
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14
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Abstract
The role of phosphodiesterase type 5 (PDE5) in the mechanism of male erection has been well understood, and several drugs inhibiting this enzyme are being used for the treatment of erectile dysfunction (ED). Discovery of inhibitors with improved selectivity versus other PDE isozymes could lead to drugs with improved safety profile. Achievement of selectivity versus PDE6, co-inhibition of which results in disturbances of color perception, remains the most challenging aspect of current drug discovery programs. The present review describes several case studies, where significant (>100 fold) selectivity versus PDE6 has been attained via investigation of structure-activity relationships (SAR). Special attention is given to the chemical routes leading to novel chemotypes and allowing efficient exploration of their SAR's. Strategies for attaining inhibitor selectivity discussed below may be applicable for other drug discovery programs.
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15
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Wang Y, Chackalamannil S, Hu Z, Boyle CD, Lankin CM, Xia Y, Xu R, Asberom T, Pissarnitski D, Stamford AW, Greenlee WJ, Skell J, Kurowski S, Vemulapalli S, Palamanda J, Chintala M, Wu P, Myers J, Wang P. Design and synthesis of xanthine analogues as potent and selective PDE5 inhibitors. Bioorg Med Chem Lett 2002; 12:3149-52. [PMID: 12372521 DOI: 10.1016/s0960-894x(02)00646-7] [Citation(s) in RCA: 26] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We have discovered potent and selective xanthine PDE5 inhibitors. Compound 25 (PDE5 IC(50)=0.6 nM, PDE6/PDE5=101) demonstrated similar functional efficacy and PK profile to Sildenafil (PDE5 IC(50)=3.5 nM, PDE6/PDE5=7).
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Affiliation(s)
- Yuguang Wang
- Schering-Plough Research Institute, 2015 Galloping Hill Road, Kenilworth, NJ 07033, USA.
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16
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Paquette LA, Barriault L, Pissarnitski D, Johnston JN. Stereocontrolled Elaboration of Natural (−)-Polycavernoside A, a Powerfully Toxic Metabolite of the Red Alga Polycavernosa tsudai. J Am Chem Soc 1999. [DOI: 10.1021/ja993487o] [Citation(s) in RCA: 56] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Leo A. Paquette
- Contribution from the Evans Chemical Laboratories, The Ohio State University, Columbus, Ohio 43210
| | - Louis Barriault
- Contribution from the Evans Chemical Laboratories, The Ohio State University, Columbus, Ohio 43210
| | - Dmitri Pissarnitski
- Contribution from the Evans Chemical Laboratories, The Ohio State University, Columbus, Ohio 43210
| | - Jeffrey N. Johnston
- Contribution from the Evans Chemical Laboratories, The Ohio State University, Columbus, Ohio 43210
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17
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Affiliation(s)
- Leo A. Paquette
- Evans Chemical Laboratories The Ohio State University, Columbus, Ohio 43210
| | - Louis Barriault
- Evans Chemical Laboratories The Ohio State University, Columbus, Ohio 43210
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Paquette LA, Pissarnitski D, Barriault L. A Modular Enantioselective Approach to Construction of the Macrolactone Core of Polycavernoside A. J Org Chem 1998; 63:7389-7398. [PMID: 11672388 DOI: 10.1021/jo981083t] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
A program directed toward a total synthesis of polycavernoside A is described. The synthesis of five building blocks is detailed. The first of two electrophilic units, the lactone 3, was prepared in four steps from the known enantiomerically pure oxirane 15. Pyranyl aldehyde 5 was elaborated in turn from L-malic acid via 10. While the route to 30 involved 3 as a starting material, dithiane 2 was obtained in a straightforward manner from 10 as well. The merging of the chiral sectors could not be accomplished by way of the lithiated dithianyl anions, presumably as a consequence of their heightened basicity. The strategic incorporation of the trienyl sector was accomplished, although no attempt was made to control the diastereoselectivity of the process.
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Affiliation(s)
- Leo A. Paquette
- Evans Chemical Laboratories, The Ohio State University, Columbus, Ohio 43210
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