1
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Warren M, Barrett A, Bhalla N, Brada M, Chuter R, Cobben D, Eccles CL, Hart C, Ibrahim E, McClelland J, Rea M, Turtle L, Fenwick JD. Sorting lung tumor volumes from 4D-MRI data using an automatic tumor-based signal reduces stitching artifacts. J Appl Clin Med Phys 2024; 25:e14262. [PMID: 38234116 PMCID: PMC11005973 DOI: 10.1002/acm2.14262] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 10/30/2023] [Accepted: 12/18/2023] [Indexed: 01/19/2024] Open
Abstract
PURPOSE To investigate whether a novel signal derived from tumor motion allows more precise sorting of 4D-magnetic resonance (4D-MR) image data than do signals based on normal anatomy, reducing levels of stitching artifacts within sorted lung tumor volumes. METHODS (4D-MRI) scans were collected for 10 lung cancer patients using a 2D T2-weighted single-shot turbo spin echo sequence, obtaining 25 repeat frames per image slice. For each slice, a tumor-motion signal was generated using the first principal component of movement in the tumor neighborhood (TumorPC1). Signals were also generated from displacements of the diaphragm (DIA) and upper and lower chest wall (UCW/LCW) and from slice body area changes (BA). Pearson r coefficients of correlations between observed tumor movement and respiratory signals were determined. TumorPC1, DIA, and UCW signals were used to compile image stacks showing each patient's tumor volume in a respiratory phase. Unsorted image stacks were also built for comparison. For each image stack, the presence of stitching artifacts was assessed by measuring the roughness of the compiled tumor surface according to a roughness metric (Rg). Statistical differences in weighted means of Rg between any two signals were determined using an exact permutation test. RESULTS The TumorPC1 signal was most strongly correlated with superior-inferior tumor motion, and had significantly higher Pearson r values (median 0.86) than those determined for correlations of UCW, LCW, and BA with superior-inferior tumor motion (p < 0.05). Weighted means of ratios of Rg values in TumorPC1 image stacks to those in unsorted, UCW, and DIA stacks were 0.67, 0.69, and 0.71, all significantly favoring TumorPC1 (p = 0.02-0.05). For other pairs of signals, weighted mean ratios did not differ significantly from one. CONCLUSION Tumor volumes were smoother in 3D image stacks compiled using the first principal component of tumor motion than in stacks compiled with signals based on normal anatomy.
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Affiliation(s)
- Mark Warren
- School of Health Sciences, Institute of Population HealthUniversity of LiverpoolLiverpoolUK
| | | | - Neeraj Bhalla
- The Clatterbridge Cancer Centre NHS Foundation TrustLiverpoolUK
| | - Michael Brada
- Molecular & Clinical Cancer Medicine, Institute of Institute of Systems, Molecular and Integrative BiologyUniversity of LiverpoolLiverpoolUK
| | - Robert Chuter
- Christie Medical Physics and EngineeringThe Christie NHS Foundation TrustManchesterUK
- Division of Cancer Sciences, School of Medical Sciences, Faculty of Biology, Medicine and HealthUniversity of ManchesterManchesterUK
| | - David Cobben
- The Clatterbridge Cancer Centre NHS Foundation TrustLiverpoolUK
- Department of Health Data Science, Institute of Population HealthUniversity of LiverpoolLiverpoolUK
| | - Cynthia L. Eccles
- Division of Cancer Sciences, School of Medical Sciences, Faculty of Biology, Medicine and HealthUniversity of ManchesterManchesterUK
- RadiotherapyThe Christie NHS Foundation TrustManchesterUK
| | - Clare Hart
- The Clatterbridge Cancer Centre NHS Foundation TrustLiverpoolUK
| | - Ehab Ibrahim
- The Clatterbridge Cancer Centre NHS Foundation TrustLiverpoolUK
| | - Jamie McClelland
- Department of Medical Physics and BioengineeringUniversity College LondonLondonUK
| | - Marc Rea
- The Clatterbridge Cancer Centre NHS Foundation TrustLiverpoolUK
| | - Louise Turtle
- The Clatterbridge Cancer Centre NHS Foundation TrustLiverpoolUK
| | - John D. Fenwick
- Department of Medical Physics and BioengineeringUniversity College LondonLondonUK
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2
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Nikou P, Nisbet A, Thompson A, Gulliford S, McClelland J. PO-1492 Characterising anatomical changes of head and neck cancer patients during radiotherapy treatment. Radiother Oncol 2022. [DOI: 10.1016/s0167-8140(22)03456-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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3
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Jackson C, Allington L, Chang Y, McClelland J, Gulliford S. PO-1976 Has the Covid-19 Pandemic increased willingness to engage with remote collection of outcome data? Radiother Oncol 2021. [PMCID: PMC8629146 DOI: 10.1016/s0167-8140(21)08427-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
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4
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Hussein M, Akintonde A, McClelland J, Speight R, Clark CH. Clinical use, challenges, and barriers to implementation of deformable image registration in radiotherapy - the need for guidance and QA tools. Br J Radiol 2021; 94:20210001. [PMID: 33882253 PMCID: PMC8173691 DOI: 10.1259/bjr.20210001] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 04/06/2021] [Accepted: 04/12/2021] [Indexed: 12/22/2022] Open
Abstract
OBJECTIVE The aim of this study was to evaluate the current status of the clinical use of deformable image registration (DIR) in radiotherapy and to gain an understanding of the challenges faced by centres in clinical implementation of DIR, including commissioning and quality assurance (QA), and to determine the barriers faced. The goal was to inform whether additional guidance and QA tools were needed. METHODS A survey focussed on clinical use, metrics used, how centres would like to use DIR in the future and challenges faced, was designed and sent to 71 radiotherapy centres in the UK. Data were gathered specifically on which centres we using DIR clinically, which applications were being used, what commissioning and QA tests were performed, and what barriers were preventing the integration of DIR into the clinical workflow. Centres that did not use DIR clinically were encouraged to fill in the survey and were asked if they have any future plans and in what timescale. RESULTS 51 out of 71 (70%) radiotherapy centres responded. 47 centres reported access to a commercial software that could perform DIR. 20 centres already used DIR clinically, and 22 centres had plans to implement an application of DIR within 3 years of the survey. The most common clinical application of DIR was to propagate contours from one scan to another (19 centres). In each of the applications, the types of commissioning and QA tests performed varied depending on the type of application and between centres. Some of the key barriers were determining when a DIR was satisfactory including which metrics to use, and lack of resources. CONCLUSION The survey results highlighted that there is a need for additional guidelines, training, better tools for commissioning DIR software and for the QA of registration results, which should include developing or recommending which quantitative metrics to use. ADVANCES IN KNOWLEDGE This survey has given a useful picture of the clinical use and lack of use of DIR in UK radiotherapy centres. The survey provided useful insight into how centres commission and QA DIR applications, especially the variability among centres. It was also possible to highlight key barriers to implementation and determine factors that may help overcome this which include the need for additional guidance specific to different applications, better tools and metrics.
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Affiliation(s)
- Mohammad Hussein
- Metrology for Medical Physics Centre, National Physical Laboratory, Teddington, UK
| | - Adeyemi Akintonde
- Centre for Medical Image Computing, University College London, London, UK
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, UK
| | - Richard Speight
- Leeds Cancer Centre, Leeds Teaching Hospitals NHS Trust, Leeds, UK
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5
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Dong Y, Kumar H, Tawhai M, Veiga C, Szmul A, Landau D, McClelland J, Lao L, Burrowes KS. In Silico Ventilation Within the Dose-Volume is Predictive of Lung Function Post-radiation Therapy in Patients with Lung Cancer. Ann Biomed Eng 2020; 49:1416-1431. [PMID: 33258090 PMCID: PMC8058012 DOI: 10.1007/s10439-020-02697-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Accepted: 11/18/2020] [Indexed: 12/24/2022]
Abstract
Lung cancer is a leading cause of death worldwide. Radiation therapy (RT) is one method to treat this disease. A common side effect of RT for lung cancer is radiation-induced lung damage (RILD) which leads to loss of lung function. RILD often compounds pre-existing smoking-related regional lung function impairment. It is difficult to predict patient outcomes due to large variability in individual response to RT. In this study, the capability of image-based modelling of regional ventilation in lung cancer patients to predict lung function post-RT was investigated. Twenty-five patient-based models were created using CT images to define the airway geometry, size and location of tumour, and distribution of emphysema. Simulated ventilation within the 20 Gy isodose volume showed a statistically significant negative correlation with the change in forced expiratory volume in 1 s 12-months post-RT (p = 0.001, R = - 0.61). Patients with higher simulated ventilation within the 20 Gy isodose volume had a greater loss in lung function post-RT and vice versa. This relationship was only evident with the combined impact of tumour and emphysema, with the location of the emphysema relative to the dose-volume being important. Our results suggest that model-based ventilation measures can be used in the prediction of patient lung function post-RT.
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Affiliation(s)
- Yu Dong
- Department of Chemical and Materials Engineering, University of Auckland, Auckland, New Zealand
| | - H Kumar
- Auckland Bioengineering Institute, Level 6, 70 Symonds Street, Auckland, 1010, New Zealand
| | - M Tawhai
- Auckland Bioengineering Institute, Level 6, 70 Symonds Street, Auckland, 1010, New Zealand
| | - C Veiga
- Centre for Medical Image Computing, Department of Medical Physics & Biomedical Engineering, University College London, London, UK
| | - A Szmul
- Centre for Medical Image Computing, Department of Medical Physics & Biomedical Engineering, University College London, London, UK
| | - D Landau
- Department of Oncology, University College London Hospital, London, UK
| | - J McClelland
- Centre for Medical Image Computing, Department of Medical Physics & Biomedical Engineering, University College London, London, UK
| | - L Lao
- Auckland District Health Board, Auckland, New Zealand
| | - K S Burrowes
- Department of Chemical and Materials Engineering, University of Auckland, Auckland, New Zealand. .,Auckland Bioengineering Institute, Level 6, 70 Symonds Street, Auckland, 1010, New Zealand.
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6
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Hussein M, McClelland J, Speight R, Clark C. PO-1635: How do UK centres clinically use, commission, and QA deformable image registration? Radiother Oncol 2020. [DOI: 10.1016/s0167-8140(21)01653-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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7
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Špiclin Ž, McClelland J, Kybic J, Goksel O, Pyles J, Eck J, Bastiani M, Roebroeck A, Ashburner J, Goebel R. An Image Registration-Based Method for EPI Distortion Correction Based on Opposite Phase Encoding (COPE). Biomedical Image Registration 2020; 12120. [PMCID: PMC7279930 DOI: 10.1007/978-3-030-50120-4_12] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Surprisingly, estimated voxel displacement maps (VDMs), based on image registration, seem to work just as well to correct geometrical distortion in functional MRI data (EPI) as VDMs based on actual information about the magnetic field. In this article, we compare our new image registration-based distortion correction method ‘COPE’ to an implementation of the pixelshift method. Our approach builds on existing image registration-based techniques using opposite phase encoding, extending these by local cost aggregation. Comparison of these methods with 3T and 7T spin-echo (SE) and gradient-echo (GE) data show that the image registration-based method is a good alternative to the fieldmap-based EPI distortion correction method.
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Affiliation(s)
- Žiga Špiclin
- Faculty of Electrical Engineering, University of Ljubljana, Ljubljana, Slovenia
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, UK
| | - Jan Kybic
- Faculty of Electrical Engineering, Czech Technical University in Prague, Prague, Czech Republic
| | - Orcun Goksel
- Computer Vision Lab, ETH Zurich, Zurich, Switzerland
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8
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Špiclin Ž, McClelland J, Kybic J, Goksel O. Learning Deformable Image Registration with Structure Guidance Constraints for Adaptive Radiotherapy. Biomedical Image Registration 2020. [PMCID: PMC7279938 DOI: 10.1007/978-3-030-50120-4_5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Affiliation(s)
- Žiga Špiclin
- Faculty of Electrical Engineering, University of Ljubljana, Ljubljana, Slovenia
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, UK
| | - Jan Kybic
- Faculty of Electrical Engineering, Czech Technical University in Prague, Prague, Czech Republic
| | - Orcun Goksel
- Computer Vision Lab, ETH Zurich, Zurich, Switzerland
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9
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Abstract
Most traditional image registration algorithms aimed at aligning a pair of images impose well-established regularizers to guarantee smoothness of unknown deformation fields. Since these methods assume global smoothness within the image domain, they pose issues for scenarios where local discontinuities are expected, such as the sliding motion between the lungs and the chest wall during the respiratory cycle. Furthermore, an objective function must be optimized for each given pair of images, thus registering multiple sets of images become very time-consuming and scale poorly to higher resolution image volumes. Using recent advances in deep learning, we propose an unsupervised learning-based image registration model. The model is trained over a loss function with a custom regularizer that preserves local discontinuities, while simultaneously respecting the smoothness assumption in homogeneous regions of image volumes. Qualitative and quantitative validations on 3D pairs of lung CT datasets will be presented.
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Affiliation(s)
- Žiga Špiclin
- Faculty of Electrical Engineering, University of Ljubljana, Ljubljana, Slovenia
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, UK
| | - Jan Kybic
- Faculty of Electrical Engineering, Czech Technical University in Prague, Prague, Czech Republic
| | - Orcun Goksel
- Computer Vision Lab, ETH Zurich, Zurich, Switzerland
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10
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Abstract
The use of different stains for histological sample preparation reveals distinct tissue properties and may result in a more accurate diagnosis. However, as a result of the staining process, the tissue slides are being deformed and registration is required before further processing. The importance of this problem led to organizing an open challenge named Automatic Non-rigid Histological Image Registration Challenge (ANHIR), organized jointly with the IEEE ISBI 2019 conference. The challenge organizers provided several hundred image pairs and a server-side evaluation platform. One of the most difficult sub-problems for the challenge participants was to find an initial, global transform, before attempting to calculate the final, non-rigid deformation field. This article solves the problem by proposing a deep network trained in an unsupervised way with a good generalization. We propose a method that works well for images with different resolutions, aspect ratios, without the necessity to perform image padding, while maintaining a low number of network parameters and fast forward pass time. The proposed method is orders of magnitude faster than the classical approach based on the iterative similarity metric optimization or computer vision descriptors. The success rate is above 98% for both the training set and the evaluation set. We make both the training and inference code freely available.
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Affiliation(s)
- Žiga Špiclin
- Faculty of Electrical Engineering, University of Ljubljana, Ljubljana, Slovenia
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, UK
| | - Jan Kybic
- Faculty of Electrical Engineering, Czech Technical University in Prague, Prague, Czech Republic
| | - Orcun Goksel
- Computer Vision Lab, ETH Zurich, Zurich, Switzerland
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11
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Špiclin Ž, McClelland J, Kybic J, Goksel O. Enabling Manual Intervention for Otherwise Automated Registration of Large Image Series. Biomedical Image Registration 2020. [PMCID: PMC7279934 DOI: 10.1007/978-3-030-50120-4_3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Abstract
Aligning thousands of images from serial imaging techniques can be a cumbersome task. Methods ([2, 11, 21]) and programs for automation exist (e.g. [1, 4, 10]) but often need case-specific tuning of many meta-parameters (e.g. mask, pyramid-scales, denoise, transform-type, method/metric, optimizer and its parameters). Other programs, that apparently only depend on a few parameter often just hide many of the remaining ones (initialized with default values), often cannot handle challenging cases satisfactorily. Instead of spending much time on the search for suitable meta-parameters that yield a usable result for the complete image series, the described approach allows to intervene by manually aligning problematic image pairs. The manually found transform is then used by the automatic alignment as an initial transformation that is then optimized as in the pure automatic case. Therefore the manual alignment does not have to be very precise. This way the worst case time consumption is limited and can be estimated (manual alignment of the whole series) in contrast to tuning of meta-parameters of pure auto-alignment of complete series which can hardly be guessed.
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Affiliation(s)
- Žiga Špiclin
- Faculty of Electrical Engineering, University of Ljubljana, Ljubljana, Slovenia
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, UK
| | - Jan Kybic
- Faculty of Electrical Engineering, Czech Technical University in Prague, Prague, Czech Republic
| | - Orcun Goksel
- Computer Vision Lab, ETH Zurich, Zurich, Switzerland
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12
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Abstract
A novel crack capable image registration framework is proposed. The approach is designed for registration problems suffering from cracks, gaps, or holes. The approach enables discontinuous transformation fields and also features an automatically computed crack indicator function and therefore does not require a pre-segmentation. The new approach is a generalization of the commonly used variational image registration approach. New contributions are an additional dissipation term in the overall energy, a proper balancing of different ingredients, and a joint optimization for both, the crack indicator function and the transformation. Results for histological serial sectioning of marmoset brain images demonstrate the potential of the approach and its superiority as compared to a standard registration.
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Affiliation(s)
- Žiga Špiclin
- Faculty of Electrical Engineering, University of Ljubljana, Ljubljana, Slovenia
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, UK
| | - Jan Kybic
- Faculty of Electrical Engineering, Czech Technical University in Prague, Prague, Czech Republic
| | - Orcun Goksel
- Computer Vision Lab, ETH Zurich, Zurich, Switzerland
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13
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Špiclin Ž, McClelland J, Kybic J, Goksel O. Nonlinear Alignment of Whole Tractograms with the Linear Assignment Problem. Biomedical Image Registration 2020. [PMCID: PMC7279924 DOI: 10.1007/978-3-030-50120-4_1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
After registration of the imaging data of two brains, homologous anatomical structures are expected to overlap better than before registration. Diffusion magnetic resonance imaging (dMRI) techniques and tractography techniques provide a representation of the anatomical connections in the white matter, as hundreds of thousands of streamlines, forming the tractogram. The literature on methods for aligning tractograms is in active development and provides methods that operate either from voxel information, e.g. fractional anisotropy, orientation distribution function, T1-weighted MRI, or directly from streamline information. In this work, we align streamlines using the linear assignment problem (LAP) and propose a method to reduce the high computational cost of aligning whole brain tractograms. As further contribution, we present a comparison among some of the freely-available linear and nonlinear tractogram alignment methods, where we show that our LAP-based method outperforms all others. In discussing the results, we show that a main limitation of all streamline-based nonlinear registration methods is the computational cost and that addressing such problem may lead to further improvement in the quality of registration.
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Affiliation(s)
- Žiga Špiclin
- Faculty of Electrical Engineering, University of Ljubljana, Ljubljana, Slovenia
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, UK
| | - Jan Kybic
- Faculty of Electrical Engineering, Czech Technical University in Prague, Prague, Czech Republic
| | - Orcun Goksel
- Computer Vision Lab, ETH Zurich, Zurich, Switzerland
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14
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Green B, Lin M, McClelland J, Semciw A, Schache A, Rotstein A, Cook J, Pizzari T. Which factors are predictive of return to play and re-injury following calf muscle strain injury? J Sci Med Sport 2019. [DOI: 10.1016/j.jsams.2019.08.167] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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15
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Johnston P, Feller J, McClelland J, Webster K. Comparison of quadriceps and hamstring tendon grafts for anterior cruciate ligament reconstruction surgery. J Sci Med Sport 2019. [DOI: 10.1016/j.jsams.2019.08.253] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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16
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Bertholet J, Knopf A, Eiben B, McClelland J, Grimwood A, Harris E, Menten M, Poulsen P, Nguyen DT, Keall P, Oelfke U. Real-time intrafraction motion monitoring in external beam radiotherapy. Phys Med Biol 2019; 64:15TR01. [PMID: 31226704 PMCID: PMC7655120 DOI: 10.1088/1361-6560/ab2ba8] [Citation(s) in RCA: 108] [Impact Index Per Article: 21.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2019] [Revised: 05/10/2019] [Accepted: 06/21/2019] [Indexed: 12/25/2022]
Abstract
Radiotherapy (RT) aims to deliver a spatially conformal dose of radiation to tumours while maximizing the dose sparing to healthy tissues. However, the internal patient anatomy is constantly moving due to respiratory, cardiac, gastrointestinal and urinary activity. The long term goal of the RT community to 'see what we treat, as we treat' and to act on this information instantaneously has resulted in rapid technological innovation. Specialized treatment machines, such as robotic or gimbal-steered linear accelerators (linac) with in-room imaging suites, have been developed specifically for real-time treatment adaptation. Additional equipment, such as stereoscopic kilovoltage (kV) imaging, ultrasound transducers and electromagnetic transponders, has been developed for intrafraction motion monitoring on conventional linacs. Magnetic resonance imaging (MRI) has been integrated with cobalt treatment units and more recently with linacs. In addition to hardware innovation, software development has played a substantial role in the development of motion monitoring methods based on respiratory motion surrogates and planar kV or Megavoltage (MV) imaging that is available on standard equipped linacs. In this paper, we review and compare the different intrafraction motion monitoring methods proposed in the literature and demonstrated in real-time on clinical data as well as their possible future developments. We then discuss general considerations on validation and quality assurance for clinical implementation. Besides photon RT, particle therapy is increasingly used to treat moving targets. However, transferring motion monitoring technologies from linacs to particle beam lines presents substantial challenges. Lessons learned from the implementation of real-time intrafraction monitoring for photon RT will be used as a basis to discuss the implementation of these methods for particle RT.
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Affiliation(s)
- Jenny Bertholet
- Joint Department of Physics, Institute of Cancer Research and Royal Marsden NHS
Foundation Trust, London, United
Kingdom
- Author to whom any correspondence should be
addressed
| | - Antje Knopf
- Department of Radiation Oncology,
University Medical Center
Groningen, University of Groningen, The
Netherlands
| | - Björn Eiben
- Department of Medical Physics and Biomedical
Engineering, Centre for Medical Image Computing, University College London, London,
United Kingdom
| | - Jamie McClelland
- Department of Medical Physics and Biomedical
Engineering, Centre for Medical Image Computing, University College London, London,
United Kingdom
| | - Alexander Grimwood
- Joint Department of Physics, Institute of Cancer Research and Royal Marsden NHS
Foundation Trust, London, United
Kingdom
| | - Emma Harris
- Joint Department of Physics, Institute of Cancer Research and Royal Marsden NHS
Foundation Trust, London, United
Kingdom
| | - Martin Menten
- Joint Department of Physics, Institute of Cancer Research and Royal Marsden NHS
Foundation Trust, London, United
Kingdom
| | - Per Poulsen
- Department of Oncology, Aarhus University Hospital, Aarhus,
Denmark
| | - Doan Trang Nguyen
- ACRF Image X Institute, University of Sydney, Sydney,
Australia
- School of Biomedical Engineering,
University of Technology
Sydney, Sydney, Australia
| | - Paul Keall
- ACRF Image X Institute, University of Sydney, Sydney,
Australia
| | - Uwe Oelfke
- Joint Department of Physics, Institute of Cancer Research and Royal Marsden NHS
Foundation Trust, London, United
Kingdom
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Green R, Pizzari T, McClelland J, Zacharias A, Huynh P, Weerakkody N, Semciw A. Between session reliability of intramuscular electromyography for segments of gluteus medius and minimus during gait and stepping tasks. J Electromyogr Kinesiol 2019; 47:96-104. [DOI: 10.1016/j.jelekin.2019.05.015] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2019] [Revised: 05/19/2019] [Accepted: 05/22/2019] [Indexed: 11/17/2022] Open
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18
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Dong Y, Tawhai M, Veiga C, Doel T, Landau D, McClelland J, Burrowes K. PO-0948 Predicting lung function post-RT in lung cancer using multivariate and principal component analysis. Radiother Oncol 2019. [DOI: 10.1016/s0167-8140(19)31368-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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19
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Akintonde A, Grimes H, Moinuddin S, Sharma R, McClelland J, Thielemans K. EP-2067 Data driven region of interest respiratory surrogate signal extraction from CBCT data. Radiother Oncol 2019. [DOI: 10.1016/s0167-8140(19)32487-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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20
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Hunt S, Thomas S, McClelland J, Harrison K, Rose C, Scaife J, Sutcliffe M, Burnet N, Jena R. EP-2038 Use of deformable image registration for automatic outlining of the rectum. Radiother Oncol 2019. [DOI: 10.1016/s0167-8140(19)32458-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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21
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Paganelli C, Whelan B, Peroni M, Summers P, Fast M, van de Lindt T, McClelland J, Eiben B, Keall P, Lomax T, Riboldi M, Baroni G. MRI-guidance for motion management in external beam radiotherapy: current status and future challenges. Phys Med Biol 2018; 63:22TR03. [PMID: 30457121 DOI: 10.1088/1361-6560/aaebcf] [Citation(s) in RCA: 82] [Impact Index Per Article: 13.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
High precision conformal radiotherapy requires sophisticated imaging techniques to aid in target localisation for planning and treatment, particularly when organ motion due to respiration is involved. X-ray based imaging is a well-established standard for radiotherapy treatments. Over the last few years, the ability of magnetic resonance imaging (MRI) to provide radiation-free images with high-resolution and superb soft tissue contrast has highlighted the potential of this imaging modality for radiotherapy treatment planning and motion management. In addition, these advantageous properties motivated several recent developments towards combined MRI radiation therapy treatment units, enabling in-room MRI-guidance and treatment adaptation. The aim of this review is to provide an overview of the state-of-the-art in MRI-based image guidance for organ motion management in external beam radiotherapy. Methodological aspects of MRI for organ motion management are reviewed and their application in treatment planning, in-room guidance and adaptive radiotherapy described. Finally, a roadmap for an optimal use of MRI-guidance is highlighted and future challenges are discussed.
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Affiliation(s)
- C Paganelli
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Milano, Italy. Author to whom any correspondence should be addressed. www.cartcas.polimi.it
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Green B, McClelland J, Semciw A, Pizzari T. Calf strain injuries in elite Australian rules football: Epidemiological features, muscles injured and return to play. J Sci Med Sport 2018. [DOI: 10.1016/j.jsams.2018.09.109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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23
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Veiga C, Landau D, Devaraj A, Doel T, Ngai Y, Hawkes D, McClelland J. Objective CT-Based Imaging Biomarkers of Radiation-Induced Lung Damage. Int J Radiat Oncol Biol Phys 2018. [DOI: 10.1016/j.ijrobp.2018.06.191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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24
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Rabusin C, Menz H, McClelland J, Evans A, Landorf K, Malliaris P, Docking S, Munteanu S. Efficacy of heel lifts in the treatment of mid-portion Achilles tendinopathy: A randomised trial. J Sci Med Sport 2018. [DOI: 10.1016/j.jsams.2018.09.026] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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25
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Trnková P, Knäusl B, Actis O, Bert C, Biegun AK, Boehlen TT, Furtado H, McClelland J, Mori S, Rinaldi I, Rucinski A, Knopf AC. Clinical implementations of 4D pencil beam scanned particle therapy: Report on the 4D treatment planning workshop 2016 and 2017. Phys Med 2018; 54:121-130. [PMID: 30337001 DOI: 10.1016/j.ejmp.2018.10.002] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/11/2018] [Revised: 09/18/2018] [Accepted: 10/02/2018] [Indexed: 12/14/2022] Open
Abstract
In 2016 and 2017, the 8th and 9th 4D treatment planning workshop took place in Groningen (the Netherlands) and Vienna (Austria), respectively. This annual workshop brings together international experts to discuss research, advances in clinical implementation as well as problems and challenges in 4D treatment planning, mainly in spot scanned proton therapy. In the last two years several aspects like treatment planning, beam delivery, Monte Carlo simulations, motion modeling and monitoring, QA phantoms as well as 4D imaging were thoroughly discussed. This report provides an overview of discussed topics, recent findings and literature review from the last two years. Its main focus is to highlight translation of 4D research into clinical practice and to discuss remaining challenges and pitfalls that still need to be addressed and to be overcome.
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Affiliation(s)
- Petra Trnková
- HollandPTC, P.O. Box 5046, 2600 GA Delft, the Netherlands; Erasmus MC, P.O. Box 5201, 3008 AE Rotterdam, the Netherlands
| | - Barbara Knäusl
- Department of Radiation Oncology, Division of Medical Radiation Physics, Christian Doppler Laboratory for Medical Radiation Research for Radiation Oncology, Medical University of Vienna/AKH Vienna, Austria
| | - Oxana Actis
- Paul Scherrer Institute (PSI), 5232 Villigen, Switzerland
| | - Christoph Bert
- Department of Radiation Oncology, Universitätsklinikum Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Germany
| | - Aleksandra K Biegun
- KVI-Center for Advanced Radiation Technology, University of Groningen, Groningen, the Netherlands
| | - Till T Boehlen
- Paul Scherrer Institute (PSI), 5232 Villigen, Switzerland
| | - Hugo Furtado
- Department of Radiation Oncology, Division of Medical Radiation Physics, Christian Doppler Laboratory for Medical Radiation Research for Radiation Oncology, Medical University of Vienna/AKH Vienna, Austria
| | - Jamie McClelland
- Centre for Medical Image Computing, Dept. Medical Physics and Biomedical, University College London, London, UK
| | - Shinichiro Mori
- National Institute of Radiological Sciences for Charged Particle Therapy, Chiba, Japan
| | - Ilaria Rinaldi
- Lyon 1 University and CNRS/IN2P3, UMR 5822, 69622 Villeurbanne, France; MAASTRO Clinic, P.O. Box 3035, 6202 NA Maastricht, the Netherlands
| | | | - Antje C Knopf
- University of Groningen, University Medical Center Groningen, Department of Radiation Oncology, Groningen, the Netherlands.
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Chuang C, Xu R, Li X, Royle G, McClelland J. OC-0525: An evaluation of vocal instruction for external respiratory motion using kernel density estimation. Radiother Oncol 2018. [DOI: 10.1016/s0167-8140(18)30835-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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Cuplov V, Holman BF, McClelland J, Modat M, Hutton BF, Thielemans K. Issues in quantification of registered respiratory gated PET/CT in the lung. ACTA ACUST UNITED AC 2017; 63:015007. [DOI: 10.1088/1361-6560/aa950b] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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28
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Pizzari T, McClelland J, Semciw A. Inducing slight hip discomfort reduces hip extension in gait. J Sci Med Sport 2017. [DOI: 10.1016/j.jsams.2017.09.291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Veiga C, Landau D, Devaraj A, Doel T, Hawkes D, McClelland J. Quantification of Radiation Therapy-Induced Diaphragmatic Changes Using Serial CT Imaging. Int J Radiat Oncol Biol Phys 2017. [DOI: 10.1016/j.ijrobp.2017.06.045] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Burgos N, Guerreiro F, McClelland J, Presles B, Modat M, Nill S, Dearnaley D, deSouza N, Oelfke U, Knopf AC, Ourselin S, Jorge Cardoso M. Iterative framework for the joint segmentation and CT synthesis of MR images: application to MRI-only radiotherapy treatment planning. Phys Med Biol 2017; 62:4237-4253. [PMID: 28291745 PMCID: PMC5423555 DOI: 10.1088/1361-6560/aa66bf] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2016] [Revised: 03/10/2017] [Accepted: 03/14/2017] [Indexed: 11/11/2022]
Abstract
To tackle the problem of magnetic resonance imaging (MRI)-only radiotherapy treatment planning (RTP), we propose a multi-atlas information propagation scheme that jointly segments organs and generates pseudo x-ray computed tomography (CT) data from structural MR images (T1-weighted and T2-weighted). As the performance of the method strongly depends on the quality of the atlas database composed of multiple sets of aligned MR, CT and segmented images, we also propose a robust way of registering atlas MR and CT images, which combines structure-guided registration, and CT and MR image synthesis. We first evaluated the proposed framework in terms of segmentation and CT synthesis accuracy on 15 subjects with prostate cancer. The segmentations obtained with the proposed method were compared using the Dice score coefficient (DSC) to the manual segmentations. Mean DSCs of 0.73, 0.90, 0.77 and 0.90 were obtained for the prostate, bladder, rectum and femur heads, respectively. The mean absolute error (MAE) and the mean error (ME) were computed between the reference CTs (non-rigidly aligned to the MRs) and the pseudo CTs generated with the proposed method. The MAE was on average [Formula: see text] HU and the ME [Formula: see text] HU. We then performed a dosimetric evaluation by re-calculating plans on the pseudo CTs and comparing them to the plans optimised on the reference CTs. We compared the cumulative dose volume histograms (DVH) obtained for the pseudo CTs to the DVH obtained for the reference CTs in the planning target volume (PTV) located in the prostate, and in the organs at risk at different DVH points. We obtained average differences of [Formula: see text] in the PTV for [Formula: see text], and between [Formula: see text] and 0.05% in the PTV, bladder, rectum and femur heads for D mean and [Formula: see text]. Overall, we demonstrate that the proposed framework is able to automatically generate accurate pseudo CT images and segmentations in the pelvic region, potentially bypassing the need for CT scan for accurate RTP.
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Affiliation(s)
- Ninon Burgos
- Translational Imaging Group, CMIC, University College London, London, United Kingdom
| | - Filipa Guerreiro
- Department of Radiotherapy, University Medical Center Utrecht, Utrecht, Netherlands
| | - Jamie McClelland
- Centre for Medical Image Computing, University College London, London, United Kingdom
| | - Benoît Presles
- Translational Imaging Group, CMIC, University College London, London, United Kingdom
| | - Marc Modat
- Translational Imaging Group, CMIC, University College London, London, United Kingdom
- Dementia Research Centre, Institute of Neurology, UCL, London, United Kingdom
| | - Simeon Nill
- Joint Department of Physics, Institute of Cancer Research and Royal Marsden NHS Foundation Trust (ICR/RMH), London, United Kingdom
| | | | - Nandita deSouza
- CRUK Centre for Cancer Imaging, ICR/RMH, Sutton, United Kingdom
| | - Uwe Oelfke
- Joint Department of Physics, Institute of Cancer Research and Royal Marsden NHS Foundation Trust (ICR/RMH), London, United Kingdom
| | - Antje-Christin Knopf
- University of Groningen, University Medical Center Groningen, Department of Radiation Oncology, Groningen, Netherlands
| | - Sébastien Ourselin
- Translational Imaging Group, CMIC, University College London, London, United Kingdom
- Dementia Research Centre, Institute of Neurology, UCL, London, United Kingdom
| | - M Jorge Cardoso
- Translational Imaging Group, CMIC, University College London, London, United Kingdom
- Dementia Research Centre, Institute of Neurology, UCL, London, United Kingdom
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Guerreiro F, Burgos N, Dunlop A, Wong K, Petkar I, Nutting C, Harrington K, Bhide S, Newbold K, Dearnaley D, deSouza NM, Morgan VA, McClelland J, Nill S, Cardoso MJ, Ourselin S, Oelfke U, Knopf AC. Evaluation of a multi-atlas CT synthesis approach for MRI-only radiotherapy treatment planning. Phys Med 2017; 35:7-17. [PMID: 28242137 PMCID: PMC5368286 DOI: 10.1016/j.ejmp.2017.02.017] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 09/20/2016] [Revised: 01/27/2017] [Accepted: 02/14/2017] [Indexed: 11/25/2022] Open
Abstract
BACKGROUND AND PURPOSE Computed tomography (CT) imaging is the current gold standard for radiotherapy treatment planning (RTP). The establishment of a magnetic resonance imaging (MRI) only RTP workflow requires the generation of a synthetic CT (sCT) for dose calculation. This study evaluates the feasibility of using a multi-atlas sCT synthesis approach (sCTa) for head and neck and prostate patients. MATERIAL AND METHODS The multi-atlas method was based on pairs of non-rigidly aligned MR and CT images. The sCTa was obtained by registering the MRI atlases to the patient's MRI and by fusing the mapped atlases according to morphological similarity to the patient. For comparison, a bulk density assignment approach (sCTbda) was also evaluated. The sCTbda was obtained by assigning density values to MRI tissue classes (air, bone and soft-tissue). After evaluating the synthesis accuracy of the sCTs (mean absolute error), sCT-based delineations were geometrically compared to the CT-based delineations. Clinical plans were re-calculated on both sCTs and a dose-volume histogram and a gamma analysis was performed using the CT dose as ground truth. RESULTS Results showed that both sCTs were suitable to perform clinical dose calculations with mean dose differences less than 1% for both the planning target volume and the organs at risk. However, only the sCTa provided an accurate and automatic delineation of bone. CONCLUSIONS Combining MR delineations with our multi-atlas CT synthesis method could enable MRI-only treatment planning and thus improve the dosimetric and geometric accuracy of the treatment, and reduce the number of imaging procedures.
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Affiliation(s)
- F Guerreiro
- Faculty of Sciences, University of Lisbon, Campo Grande, Portugal; Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom.
| | - N Burgos
- Translational Imaging Group, Centre for Medical Imaging Computing, University College London, London, United Kingdom.
| | - A Dunlop
- Royal Marsden Hospital, London, United Kingdom
| | - K Wong
- Royal Marsden Hospital, London, United Kingdom
| | - I Petkar
- Royal Marsden Hospital, London, United Kingdom
| | - C Nutting
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom; Royal Marsden Hospital, London, United Kingdom
| | - K Harrington
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom; Royal Marsden Hospital, London, United Kingdom
| | - S Bhide
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom; Royal Marsden Hospital, London, United Kingdom
| | - K Newbold
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom; Royal Marsden Hospital, London, United Kingdom
| | - D Dearnaley
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom; Royal Marsden Hospital, London, United Kingdom
| | - N M deSouza
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom; Royal Marsden Hospital, London, United Kingdom
| | - V A Morgan
- Royal Marsden Hospital, London, United Kingdom
| | - J McClelland
- Centre for Medical Image Computing, Dept. Medical Physics and Biomedical Engineering, University College London, London, United Kingdom
| | - S Nill
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom
| | - M J Cardoso
- Translational Imaging Group, Centre for Medical Imaging Computing, University College London, London, United Kingdom
| | - S Ourselin
- Translational Imaging Group, Centre for Medical Imaging Computing, University College London, London, United Kingdom
| | - U Oelfke
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom; Royal Marsden Hospital, London, United Kingdom
| | - A C Knopf
- Division of Radiotherapy and Imaging, The Institute of Cancer Research, London, United Kingdom
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Veiga C, Janssens G, Baudier T, Hotoiu L, Brousmiche S, McClelland J, Teng CL, Yin L, Royle G, Teo BKK. A comprehensive evaluation of the accuracy of CBCT and deformable registration based dose calculation in lung proton therapy. Biomed Phys Eng Express 2017. [DOI: 10.1088/2057-1976/3/1/015003] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
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McClelland J, Maes M, Feller J, Webster K. Single limb landing from different directions in young athletes after anterior cruciate ligament reconstruction. J Sci Med Sport 2017. [DOI: 10.1016/j.jsams.2017.01.040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Johnston P, McClelland J, Feller J, Webster K. Hip and knee kinematics during successful and failed single leg landings in anterior cruciate ligament reconstructed subjects. J Sci Med Sport 2017. [DOI: 10.1016/j.jsams.2016.12.060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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Manber R, Thielemans K, Hutton BF, Wan S, McClelland J, Barnes A, Arridge S, Ourselin S, Atkinson D. Joint PET-MR respiratory motion models for clinical PET motion correction. Phys Med Biol 2016; 61:6515-30. [DOI: 10.1088/0031-9155/61/17/6515] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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McClelland J, Webster K, Whitehead T, Feller J. Altered trunk movements during landing in people with anterior cruciate ligament reconstruction. J Sci Med Sport 2015. [DOI: 10.1016/j.jsams.2015.12.149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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37
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Giles L, McClelland J, Webster K, Cook J. Atrophy of the quadriceps is not isolated to vastus medialis oblique in patellofemoral pain. J Sci Med Sport 2015. [DOI: 10.1016/j.jsams.2015.12.205] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Alves Da Rocha P, McClelland J, Morris ME. Complementary physical therapies for movement disorders in Parkinson's disease: a systematic review. Eur J Phys Rehabil Med 2015; 51:693-704. [PMID: 26138090] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
BACKGROUND The growth and popularity of complementary physical therapies for Parkinson's disease (PD) attempt to fill the gap left by conventional exercises, which does not always directly target wellbeing, enjoyment and social participation. AIM To evaluate the effects of complementary physical therapies on motor performance, quality of life and falls in people living with PD. DESIGN Systematic review with meta-analysis. POPULATION Outpatients--adults diagnosed with idiopathic PD, male or female, modified Hoehn and Yahr scale I-IV, any duration of PD, any duration of physical treatment or exercise. METHODS Randomized controlled trials, non-randomized controlled trials and case series studies were identified by systematic searching of health and rehabilitation electronic databases. A standardized form was used to extract key data from studies by two independent researchers. RESULTS 1210 participants from 20 randomized controlled trials, two non-randomized controlled trials and 13 case series studies were included. Most studies had moderately strong methodological quality. Dancing, water exercises and robotic gait training were an effective adjunct to medical management for some people living with PD. Virtual reality training, mental practice, aerobic training, boxing and Nordic walking training had a small amount of evidence supporting their use in PD. CONCLUSION On balance, alternative physical therapies are worthy of consideration when selecting treatment options for people with this common chronic disease. CLINICAL REHABILITATION IMPACT Complementary physical therapies such as dancing, hydrotherapy and robotic gait training appear to afford therapeutic benefits, increasing mobility and quality of life, in some people living with PD.
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Affiliation(s)
- P Alves Da Rocha
- Department of Physiotherapy, College Science Health and Engineering, School Allied Health, La Trobe University, Bundoora, Australia -
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Hoang Duc AK, Eminowicz G, Mendes R, Wong SL, McClelland J, Modat M, Cardoso MJ, Mendelson AF, Veiga C, Kadir T, D'souza D, Ourselin S. Validation of clinical acceptability of an atlas-based segmentation algorithm for the delineation of organs at risk in head and neck cancer. Med Phys 2015; 42:5027-34. [DOI: 10.1118/1.4927567] [Citation(s) in RCA: 43] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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McClelland J, Modat M, Champion B, Kaza E, Collins D, Leach M, Hawkes D. EP-1492: A framework combining image registration, respiratory motion models, and motion compensated image reconstruction. Radiother Oncol 2015. [DOI: 10.1016/s0167-8140(15)41484-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Veiga C, McClelland J, Moinuddin S, Lourenço A, Ricketts K, Annkah J, Modat M, Ourselin S, D'Souza D, Royle G. Toward adaptive radiotherapy for head and neck patients: Feasibility study on using CT-to-CBCT deformable registration for "dose of the day" calculations. Med Phys 2014; 41:031703. [PMID: 24593707 DOI: 10.1118/1.4864240] [Citation(s) in RCA: 167] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE The aim of this study was to evaluate the appropriateness of using computed tomography (CT) to cone-beam CT (CBCT) deformable image registration (DIR) for the application of calculating the "dose of the day" received by a head and neck patient. METHODS NiftyReg is an open-source registration package implemented in our institution. The affine registration uses a Block Matching-based approach, while the deformable registration is a GPU implementation of the popular B-spline Free Form Deformation algorithm. Two independent tests were performed to assess the suitability of our registrations methodology for "dose of the day" calculations in a deformed CT. A geometric evaluation was performed to assess the ability of the DIR method to map identical structures between the CT and CBCT datasets. Features delineated in the planning CT were warped and compared with features manually drawn on the CBCT. The authors computed the dice similarity coefficient (DSC), distance transformation, and centre of mass distance between features. A dosimetric evaluation was performed to evaluate the clinical significance of the registrations errors in the application proposed and to identify the limitations of the approximations used. Dose calculations for the same intensity-modulated radiation therapy plan on the deformed CT and replan CT were compared. Dose distributions were compared in terms of dose differences (DD), gamma analysis, target coverage, and dose volume histograms (DVHs). Doses calculated in a rigidly aligned CT and directly in an extended CBCT were also evaluated. RESULTS A mean value of 0.850 in DSC was achieved in overlap between manually delineated and warped features, with the distance between surfaces being less than 2 mm on over 90% of the pixels. Deformable registration was clearly superior to rigid registration in mapping identical structures between the two datasets. The dose recalculated in the deformed CT is a good match to the dose calculated on a replan CT. The DD is smaller than 2% of the prescribed dose on 90% of the body's voxels and it passes a 2% and 2 mm gamma-test on over 95% of the voxels. Target coverage similarity was assessed in terms of the 95%-isodose volumes. A mean value of 0.962 was obtained for the DSC, while the distance between surfaces is less than 2 mm in 95.4% of the pixels. The method proposed provided adequate dose estimation, closer to the gold standard than the other two approaches. Differences in DVH curves were mainly due to differences in the OARs definition (manual vs warped) and not due to differences in dose estimation (dose calculated in replan CT vs dose calculated in deformed CT). CONCLUSIONS Deforming a planning CT to match a daily CBCT provides the tools needed for the calculation of the "dose of the day" without the need to acquire a new CT. The initial clinical application of our method will be weekly offline calculations of the "dose of the day," and use this information to inform adaptive radiotherapy (ART). The work here presented is a first step into a full implementation of a "dose-driven" online ART.
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Affiliation(s)
- Catarina Veiga
- Radiation Physics Group, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT, United Kingdom
| | - Jamie McClelland
- Centre for Medical Image Computing, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT, United Kingdom
| | - Syed Moinuddin
- Department of Radiotherapy, University College London Hospital, London NW1 2BU, United Kingdom
| | - Ana Lourenço
- Radiation Physics Group, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT, United Kingdom
| | - Kate Ricketts
- Radiation Physics Group, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT, United Kingdom
| | - James Annkah
- Radiation Physics Group, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT, United Kingdom
| | - Marc Modat
- Centre for Medical Image Computing, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT, United Kingdom
| | - Sébastien Ourselin
- Centre for Medical Image Computing, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT, United Kingdom
| | - Derek D'Souza
- Department of Radiotherapy Physics, University College London Hospital, London NW1 2PG, United Kingdom
| | - Gary Royle
- Radiation Physics Group, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT, United Kingdom
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Knopf A, Nill S, Yohannes I, Graeff C, Dowdell S, Kurz C, Sonke JJ, Biegun AK, Lang S, McClelland J, Champion B, Fast M, Wölfelschneider J, Gianoli C, Rucinski A, Baroni G, Richter C, van de Water S, Grassberger C, Weber D, Poulsen P, Shimizu S, Bert C. Challenges of radiotherapy: report on the 4D treatment planning workshop 2013. Phys Med 2014; 30:809-15. [PMID: 25172392 DOI: 10.1016/j.ejmp.2014.07.341] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/11/2014] [Revised: 07/23/2014] [Accepted: 07/28/2014] [Indexed: 01/27/2023] Open
Abstract
This report, compiled by experts on the treatment of mobile targets with advanced radiotherapy, summarizes the main conclusions and innovations achieved during the 4D treatment planning workshop 2013. This annual workshop focuses on research aiming to advance 4D radiotherapy treatments, including all critical aspects of time resolved delivery, such as in-room imaging, motion detection, motion managing, beam application, and quality assurance techniques. The report aims to revise achievements in the field and to discuss remaining challenges and potential solutions. As main achievements advances in the development of a standardized 4D phantom and in the area of 4D-treatment plan optimization were identified. Furthermore, it was noticed that MR imaging gains importance and high interest for sequential 4DCT/MR data sets was expressed, which represents a general trend of the field towards data covering a longer time period of motion. A new point of attention was work related to dose reconstructions, which may play a major role in verification of 4D treatment deliveries. The experimental validation of results achieved by 4D treatment planning and the systematic evaluation of different deformable image registration methods especially for inter-modality fusions were identified as major remaining challenges. A challenge that was also suggested as focus for future 4D workshops was the adaptation of image guidance approaches from conventional radiotherapy into particle therapy. Besides summarizing the last workshop, the authors also want to point out new evolving demands and give an outlook on the focus of the next workshop.
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Affiliation(s)
| | | | | | | | | | | | | | - Aleksandra K Biegun
- KVI-Center for Advanced Radiation Technology, University of Groningen, Netherlands
| | | | | | | | | | | | - Chiara Gianoli
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano, Italy; Department of Radiation Oncology, Heidelberg University Hospital, Germany
| | - Antoni Rucinski
- Radiation Oncology Department, SLK-Klinik Heilbronn, Germany
| | - Guido Baroni
- Dipartimento di Elettronica, Informazione e Bioingegneria, Politecnico di Milano and Bioengineering Unit, CNAO Foundation, Pavia, Italy
| | - Christian Richter
- Oncoray - National Center for Radiation Research in Oncology, Faculty of Medicine and University Hospital C.G. Carus, TU Dresden, Helmholtz-Zentrum Dresden-Rossendorf, DKTK, Dresden, Germany
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Veiga C, McClelland J, Moinuddin S, Ricketts K, Modat M, Ourselin S, D'Souza D, Royle G. Towards adaptive radiotherapy for head and neck patients: validation of an in-house deformable registration algorithm. ACTA ACUST UNITED AC 2014. [DOI: 10.1088/1742-6596/489/1/012083] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
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Giles L, Webster K, McClelland J, Cook J. Can diagnostic ultrasound measure quadriceps size and vastus medialis to vastus lateralis ratio in patellofemoral pain syndrome? J Sci Med Sport 2013. [DOI: 10.1016/j.jsams.2013.10.154] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
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Martin J, McClelland J, Yip C, Thomas C, Hartill C, Ahmad S, O'Brien R, Meir I, Landau D, Hawkes D. Building motion models of lung tumours from cone-beam CT for radiotherapy applications. Phys Med Biol 2013; 58:1809-22. [PMID: 23442367 DOI: 10.1088/0031-9155/58/6/1809] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
A method is presented to build a surrogate-driven motion model of a lung tumour from a cone-beam CT scan, which does not require markers. By monitoring an external surrogate in real time, it is envisaged that the motion model be used to drive gated or tracked treatments. The motion model would be built immediately before each fraction of treatment and can account for inter-fraction variation. The method could also provide a better assessment of tumour shape and motion prior to delivery of each fraction of stereotactic ablative radiotherapy. The two-step method involves enhancing the tumour region in the projections, and then fitting the surrogate-driven motion model. On simulated data, the mean absolute error was reduced to 1 mm. For patient data, errors were determined by comparing estimated and clinically identified tumour positions in the projections, scaled to mm at the isocentre. Averaged over all used scans, the mean absolute error was under 2.5 mm in superior-inferior and transverse directions.
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Affiliation(s)
- James Martin
- Centre for Medical Image Computing, University College London WC1E 6BT, UK.
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Veiga C, McClelland J, Moinuddin S, Ricketts K, D'Souza D, Royle G. EP-1274: Calculation of the dose of the day using an in-house validated deformable registration algorithm. Radiother Oncol 2013. [DOI: 10.1016/s0167-8140(15)33580-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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Hawkes DJ, Mertzanidou T, Hipwell J, Atkinson D, Roth H, Hampshire T, McClelland J. Establishing spatial correspondence for the analysis of images from highly deforming anatomy. Annu Int Conf IEEE Eng Med Biol Soc 2013; 2012:3732-5. [PMID: 23366739 DOI: 10.1109/embc.2012.6346778] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
Abstract
This invited presentation summarizes recent advances in the incorporation of knowledge of the geometry, tissue mechanical properties and imaging characteristics in establishing spatial correspondence between multiple images of highly deforming, soft tissue structures. Spatial correspondence is used to aid diagnosis and in the extraction of quantitative parameters for disease detection, monitoring disease progression and assessing therapeutic response. The work is illustrated through clinical examples of multi-modal imaging of the breast, assessment of small bowel motility and polyp detection in the large bowel.
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Affiliation(s)
- David J Hawkes
- Centre for Medical Image Computing (CMIC), UCL, Gower Street, London, WC1E 6BT, UK
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Hawkes D, Barratt D, Blackall J, Chandler A, McClelland J, Penney G. Computational models in image guided interventions. Conf Proc IEEE Eng Med Biol Soc 2012; 2005:7246-9. [PMID: 17281952 DOI: 10.1109/iembs.2005.1616183] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
In image-guided surgery and image-directed therapy a plan based on pre-procedure imaging is registered to the patient in the operating or treatment room using a 3D spatial localizer. The plan can be used as long as the transformation between plan and patient remains valid. Most systems use a rigid-body transformation restricting guidance to bony structures (e.g. orthopaedic surgery or maxillo-facial surgery) or structures that are rigidly related to bone (e.g. neurosurgery). Fully 3D intra-operative imaging such as interventional MR allows image guidance to be extended to structures that move or deform during an intervention. However, this technology is expensive, interferes significantly with standard surgical protocols and requires computationally expensive non-rigid registration of the plan to the current patient scan. This talk will describe four examples where computational models of motion and anatomy are combined with 2D intra-operative imaging to extend the scope of image directed methods. In the first, image guided neurosurgery, we show how intra-operative imaging may account for distortion caused by the intervention itself. In two further applications - percutaneous ablation of metastatic liver disease and external beam radiotherapy of the lung - we show how computational models of motion might be used in conjunction with a therapy plan to guide the intervention. In the final example, selected from orthopaedic surgery, we show recent advances that demonstrate how a statistical shape model generated from example 3D images, can be used to provide image guidance without any pre-operative 3D imaging.
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Affiliation(s)
- David Hawkes
- D.J.Hawkes is the Director of the Centre for Medical Image Computing, University College London, Gower Street, London, WC1E 6BT.
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McClelland J, Suh Y, Ahmad S, Hawkes D. TH-E-218-04: Study of Deformable Registration Based 4DCT Ventilation Imaging Methods. Med Phys 2012. [DOI: 10.1118/1.4736390] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
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Roth H, McClelland J, Modat M, Hampshire T, Boone D, Hu M, Ourselin S, Halligan S, Hawkes D. WE-E-213CD-03: Inverse-Consistent Symmetric Registration of Inner Colon Surfaces Derived from Prone and Supine CT Colonography. Med Phys 2012; 39:3959-3960. [PMID: 28519970 DOI: 10.1118/1.4736159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
PURPOSE Robust registration of prone and supine colonie surfaces acquired during CT colonography may lead to faster and more accurate detection of colorectal cancer and polyps. Any directional bias when registering one surface to the other could precipitate incorrect anatomical correspondence and engender reader error. Despite this, non-rigid registration methods are often implemented asymmetrically, which could negatively influence the registration. We aimed to reduce directional bias and so increase robustness by adapting a cylindrical registration algorithm to be both symmetric and inverse-consistent. METHODS The registration task can be simplified by mapping both prone and supine colonie surfaces onto regular cylinders. Spatial correspondence can then be established in cylindrical space using the original surfaces' local shape indices. We implemented a symmetric formulation of the popular non-rigid B-spline image registration method in cylindrical space. A symmetric similarity measure computes the sum of squared differences between both cylindrical representations of prone-to-supine and supine-to-prone directions simultaneously. Inverse consistency of the transformation is enforced by adding an appropriately weighted penalty term to the optimisation function. RESULTS We selected 8 CT colonography patient cases with marked variation in luminal distension and surface morphology. We randomly allocated 4 of these for tuning an optimal set of registration parameters and 4 for validation. The mean inverse-consistency error was reduced by 32% from 4.8mm to 3.2mm by the new symmetric formulation. The mean registration error improved from 8.2mm to 7.3mm for 330 manually chosen reference points on the 4 validation sets. CONCLUSIONS A symmetric formulation of prone and supine surface registration improves the quality of registration. Information from both prone-to-supine and supine-to-prone directions helps enforce convergence towards a more accurate solution due to reduced directional bias. A more robust and accurate registration will facilitate interpretation of CT colonography and has the potential to improve existing computer-aided detection methods. The authors gratefully acknowledge financial support for this work from the NIHR program: “Imaging diagnosis of colorectal cancer: Interventions for efficient and acceptable diagnosis in symptomatic and screening populationsâ€.
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Affiliation(s)
- H Roth
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
| | - J McClelland
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
| | - M Modat
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
| | - T Hampshire
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
| | - D Boone
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
| | - M Hu
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
| | - S Ourselin
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
| | - S Halligan
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
| | - D Hawkes
- Centre for Medical Image Computing.,Centre for Medical Imaging, University College London, London, United Kingdom
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