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Pirredda M, Fañanás-Pueyo I, Oñate-Sánchez L, Mira S. Seed Longevity and Ageing: A Review on Physiological and Genetic Factors with an Emphasis on Hormonal Regulation. Plants (Basel) 2023; 13:41. [PMID: 38202349 PMCID: PMC10780731 DOI: 10.3390/plants13010041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2023] [Revised: 12/15/2023] [Accepted: 12/18/2023] [Indexed: 01/12/2024]
Abstract
Upon storage, seeds inevitably age and lose their viability over time, which determines their longevity. Longevity correlates with successful seed germination and enhancing this trait is of fundamental importance for long-term seed storage (germplasm conservation) and crop improvement. Seed longevity is governed by a complex interplay between genetic factors and environmental conditions experienced during seed development and after-ripening that will shape seed physiology. Several factors have been associated with seed ageing such as oxidative stress responses, DNA repair enzymes, and composition of seed layers. Phytohormones, mainly abscisic acid, auxins, and gibberellins, have also emerged as prominent endogenous regulators of seed longevity, and their study has provided new regulators of longevity. Gaining a thorough understanding of how hormonal signalling genes and pathways are integrated with downstream mechanisms related to seed longevity is essential for formulating strategies aimed at preserving seed quality and viability. A relevant aspect related to research in seed longevity is the existence of significant differences between results depending on the seed equilibrium relative humidity conditions used to study seed ageing. Hence, this review delves into the genetic, environmental and experimental factors affecting seed ageing and longevity, with a particular focus on their hormonal regulation. We also provide gene network models underlying hormone signalling aimed to help visualize their integration into seed longevity and ageing. We believe that the format used to present the information bolsters its value as a resource to support seed longevity research for seed conservation and crop improvement.
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Affiliation(s)
- Michela Pirredda
- Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Av. Puerta de Hierro 2, 28040 Madrid, Spain;
| | - Iris Fañanás-Pueyo
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain;
| | - Luis Oñate-Sánchez
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain;
| | - Sara Mira
- Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Av. Puerta de Hierro 2, 28040 Madrid, Spain;
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Campus de Montegancedo, Pozuelo de Alarcón, 28223 Madrid, Spain;
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Niu Y, Wang C, Suo W, Wang G, Zhao J, Wang Z, Zheng Y. Isopropylmalate synthase NtIPMS as a potential molecular marker for seed vigor in tobacco. Plant Biotechnol (Tokyo) 2023; 40:43-49. [PMID: 38213928 PMCID: PMC10777126 DOI: 10.5511/plantbiotechnology.23.0118a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 01/18/2023] [Indexed: 01/13/2024]
Abstract
Seed vigor is an important trait for tobacco production. However, the evaluation of seed vigor using molecular biomarkers is scarcely reported in tobacco. In this study, the development of molecular marker isopropylmalate synthase NtIPMS was conducted to detect seed ageing degree and seed priming effect in tobacco. Quantitative real-time PCR (qRT-PCR) analysis showed that the expression of NtIPMS was significantly induced at the initial imbibition stage during seed germination. The NtIPMS expression was positively correlated with the degree of seed ageing in non-pelleted and pelleted seeds. The mRNA level of NtIPMS was gradually increased with the increasing degree of seed ageing. The early best effect of gibberellin priming was observed in 30-h primed seeds, and the highest expression of NtIPMS was observed in 12-h primed seeds. The best stop time-point of seed priming is likely at the time 18 h after the relatively higher NtIPMS expression occurred during seed priming process. The NtIPMS mRNA detection has the potential usage as a potential molecular marker for the evaluation of seed vigor in tobacco.
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Affiliation(s)
- Yongzhi Niu
- Yuxi Zhongyan Seed Company Ltd., Seed Engineering Technology Center of Yunnan Province, Yuxi 653100, China
| | - Chengjing Wang
- The Laboratory of Seed Science and Technology, Guangdong Key Laboratory of Plant Molecular Breeding, South China Agricultural University, Guangzhou 510642, China
| | - Wenlong Suo
- Yuxi Zhongyan Seed Company Ltd., Seed Engineering Technology Center of Yunnan Province, Yuxi 653100, China
| | - Guoping Wang
- Yuxi Zhongyan Seed Company Ltd., Seed Engineering Technology Center of Yunnan Province, Yuxi 653100, China
| | - Jia Zhao
- The Laboratory of Seed Science and Technology, Guangdong Key Laboratory of Plant Molecular Breeding, South China Agricultural University, Guangzhou 510642, China
| | - Zhoufei Wang
- The Laboratory of Seed Science and Technology, Guangdong Key Laboratory of Plant Molecular Breeding, South China Agricultural University, Guangzhou 510642, China
| | - Yunye Zheng
- Yuxi Zhongyan Seed Company Ltd., Seed Engineering Technology Center of Yunnan Province, Yuxi 653100, China
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Nadarajan J, Walters C, Pritchard HW, Ballesteros D, Colville L. Seed Longevity-The Evolution of Knowledge and a Conceptual Framework. Plants (Basel) 2023; 12:471. [PMID: 36771556 PMCID: PMC9919896 DOI: 10.3390/plants12030471] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 01/12/2023] [Accepted: 01/14/2023] [Indexed: 06/18/2023]
Abstract
The lifespan or longevity of a seed is the time period over which it can remain viable. Seed longevity is a complex trait and varies greatly between species and even seed lots of the same species. Our scientific understanding of seed longevity has advanced from anecdotal 'Thumb Rules,' to empirically based models, biophysical explanations for why those models sometimes work or fail, and to the profound realisation that seeds are the model of the underexplored realm of biology when water is so limited that the cytoplasm solidifies. The environmental variables of moisture and temperature are essential factors that define survival or death, as well as the timescale to measure lifespan. There is an increasing understanding of how these factors induce cytoplasmic solidification and affect glassy properties. Cytoplasmic solidification slows down, but does not stop, the chemical reactions involved in ageing. Continued degradation of proteins, lipids and nucleic acids damage cell constituents and reduce the seed's metabolic capacity, eventually impairing the ability to germinate. This review captures the evolution of knowledge on seed longevity over the past five decades in relation to seed ageing mechanisms, technology development, including tools to predict seed storage behaviour and non-invasive techniques for seed longevity assessment. It is concluded that seed storage biology is a complex science covering seed physiology, biophysics, biochemistry and multi-omic technologies, and simultaneous knowledge advancement in these areas is necessary to improve seed storage efficacy for crops and wild species biodiversity conservation.
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Affiliation(s)
- Jayanthi Nadarajan
- The New Zealand Institute for Plant and Food Research Limited, Food Industry Science Centre, Palmerston North 4410, New Zealand
| | - Christina Walters
- USDA—Agricultural Research Service, National Laboratory for Genetic Resources Preservation, Fort Collins, CO 80521, USA
| | - Hugh W. Pritchard
- Royal Botanic Gardens, Kew, Wakehurst, Ardingly, Haywards Heath RH17 6TN, UK
- Chinese Academy of Sciences, Kunming Institute of Botany, Kunming 650201, China
| | - Daniel Ballesteros
- Faculty of Farmacy, Department of Botany and Geology, University of Valencia, Av. Vicent Estelles s/n, 46100 Valencia, Spain
| | - Louise Colville
- Royal Botanic Gardens, Kew, Wakehurst, Ardingly, Haywards Heath RH17 6TN, UK
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Chadha A, Florentine SK, Dhileepan K, Turville C. Assessing Seed Longevity of the Invasive Weed Navua Sedge ( Cyperus aromaticus), by Artificial Ageing. Plants (Basel) 2022; 11:3469. [PMID: 36559580 PMCID: PMC9786048 DOI: 10.3390/plants11243469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 11/25/2022] [Accepted: 11/26/2022] [Indexed: 06/17/2023]
Abstract
Navua sedge (Cyperus aromaticus (Ridley) Mattf. & Kukenth) is a significant agricultural and environmental weed found in tropical island countries including north Queensland, Australia. It is a prolific seed producer and consequently forms a high-density seedbank, and therefore understanding the longevity and persistence of the seeds can provide critical information required for the management of this species. A laboratory-controlled artificial ageing experiment was conducted where the seeds were exposed to a temperature of 45 °C and 60% relative humidity for 125 days. Seeds were removed at various times (1, 2, 5, 9, 20, 30, 50, 75, 100 and 125 days) and their viability determined through standard germination tests. It took 20 days in the artificial ageing environment for the seeds to decline to 50% viability which indicates that Navua sedge has relatively short-lived persistent seeds. These findings will assist in developing a better understanding of the seedbank dynamics of this invasive species, allowing managers to tactically implement control strategies and prepare budgets for ongoing treatments, and have implications for the duration and success of management programs.
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Affiliation(s)
- Aakansha Chadha
- Future Regions Research Centre, Federation University Australia, Mount Helen, VIC 3350, Australia
| | - Singarayer K. Florentine
- Future Regions Research Centre, Federation University Australia, Mount Helen, VIC 3350, Australia
- Applied Chemistry and Environmental Science, School of Science, STEM College, RMIT University, 124 La Trobe St., Melbourne, VIC 3000, Australia
| | - Kunjithapatham Dhileepan
- Department of Agriculture and Fisheries, Biosecurity Queensland, Ecosciences Precinct, Dutton Park, QLD 4102, Australia
| | - Christopher Turville
- Institute of Innovation, Science and Sustainability, Federation University Australia, Mount Helen, VIC 3350, Australia
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Gerna D, Arc E, Holzknecht M, Roach T, Jansen-Dürr P, Weiss AK, Kranner I. AtFAHD1a: A New Player Influencing Seed Longevity and Dormancy in Arabidopsis? Int J Mol Sci 2021; 22:2997. [PMID: 33804275 PMCID: PMC8001395 DOI: 10.3390/ijms22062997] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Revised: 03/10/2021] [Accepted: 03/10/2021] [Indexed: 11/16/2022] Open
Abstract
Fumarylacetoacetate hydrolase (FAH) proteins form a superfamily found in Archaea, Bacteria, and Eukaryota. However, few fumarylacetoacetate hydrolase domain (FAHD)-containing proteins have been studied in Metazoa and their role in plants remains elusive. Sequence alignments revealed high homology between two Arabidopsis thaliana FAHD-containing proteins and human FAHD1 (hFAHD1) implicated in mitochondrial dysfunction-associated senescence. Transcripts of the closest hFAHD1 orthologue in Arabidopsis (AtFAHD1a) peak during seed maturation drying, which influences seed longevity and dormancy. Here, a homology study was conducted to assess if AtFAHD1a contributes to seed longevity and vigour. We found that an A. thaliana T-DNA insertional line (Atfahd1a-1) had extended seed longevity and shallower thermo-dormancy. Compared to the wild type, metabolite profiling of dry Atfahd1a-1 seeds showed that the concentrations of several amino acids, some reducing monosaccharides, and δ-tocopherol dropped, whereas the concentrations of dehydroascorbate, its catabolic intermediate threonic acid, and ascorbate accumulated. Furthermore, the redox state of the glutathione disulphide/glutathione couple shifted towards a more reducing state in dry mature Atfahd1a-1 seeds, suggesting that AtFAHD1a affects antioxidant redox poise during seed development. In summary, AtFAHD1a appears to be involved in seed redox regulation and to affect seed quality traits such as seed thermo-dormancy and longevity.
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Affiliation(s)
- Davide Gerna
- Department of Botany, University of Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria; (E.A.); (T.R.); (I.K.)
- Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, 6020 Innsbruck, Austria; (M.H.); (P.J.-D.)
| | - Erwann Arc
- Department of Botany, University of Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria; (E.A.); (T.R.); (I.K.)
- Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, 6020 Innsbruck, Austria; (M.H.); (P.J.-D.)
| | - Max Holzknecht
- Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, 6020 Innsbruck, Austria; (M.H.); (P.J.-D.)
- Research Institute for Biomedical Aging Research, University of Innsbruck, Rennweg 10, 6020 Innsbruck, Austria
| | - Thomas Roach
- Department of Botany, University of Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria; (E.A.); (T.R.); (I.K.)
- Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, 6020 Innsbruck, Austria; (M.H.); (P.J.-D.)
| | - Pidder Jansen-Dürr
- Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, 6020 Innsbruck, Austria; (M.H.); (P.J.-D.)
- Research Institute for Biomedical Aging Research, University of Innsbruck, Rennweg 10, 6020 Innsbruck, Austria
| | - Alexander K.H. Weiss
- Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, 6020 Innsbruck, Austria; (M.H.); (P.J.-D.)
- Research Institute for Biomedical Aging Research, University of Innsbruck, Rennweg 10, 6020 Innsbruck, Austria
| | - Ilse Kranner
- Department of Botany, University of Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria; (E.A.); (T.R.); (I.K.)
- Center for Molecular Biosciences Innsbruck (CMBI), University of Innsbruck, 6020 Innsbruck, Austria; (M.H.); (P.J.-D.)
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6
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Puchta M, Boczkowska M, Groszyk J. Low RIN Value for RNA-Seq Library Construction from Long-Term Stored Seeds: A Case Study of Barley Seeds. Genes (Basel) 2020; 11:E1190. [PMID: 33066221 PMCID: PMC7650657 DOI: 10.3390/genes11101190] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/20/2020] [Revised: 09/21/2020] [Accepted: 10/08/2020] [Indexed: 12/14/2022] Open
Abstract
Seed aging is a complex biological process and its fundamentals and mechanisms have not yet been fully recognized. This is a key issue faced by research teams involved in the collection and storage of plant genetic resources in gene banks every day. Transcriptomic changes associated with seed aging in the dry state have barely been studied. The aim of the study was to develop an efficient protocol for construction of RNA-Seq libraries from long-term stored seeds with very low viability and low RNA integrity number (RIN). Here, barley seeds that have almost completely lost their viability as a result of long-term storage were used. As a control, fully viable seeds obtained in the course of field regeneration were used. The effectiveness of protocols dedicated to RNA samples with high and low RIN values was compared. The experiment concluded that library construction from low viable or long-term stored seeds with degraded RNA (RIN < 3) should be carried out with extraordinary attention due to the possibility of uneven degradation of different RNA fractions.
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Affiliation(s)
| | - Maja Boczkowska
- National Centre for Plant Genetic Resources, Plant Breeding and Acclimatization National Research Institute, Radzików, 05-870 Błonie, Poland; (M.P.); (J.G.)
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Renard J, Niñoles R, Martínez-Almonacid I, Gayubas B, Mateos-Fernández R, Bissoli G, Bueso E, Serrano R, Gadea J. Identification of novel seed longevity genes related to oxidative stress and seed coat by genome-wide association studies and reverse genetics. Plant Cell Environ 2020; 43:2523-2539. [PMID: 32519347 DOI: 10.1111/pce.13822] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2020] [Revised: 06/01/2020] [Accepted: 06/06/2020] [Indexed: 05/26/2023]
Abstract
Seed longevity is a polygenic trait of relevance for agriculture and for understanding the effect of environment on the ageing of biological systems. In order to identify novel longevity genes, we have phenotyped the natural variation of 270 ecotypes of the model plant, Arabidopsis thaliana, for natural ageing and for three accelerated ageing methods. Genome-wide analysis, using publicly available single-nucleotide polymorphisms (SNPs) data sets, identified multiple genomic regions associated with variation in seed longevity. Reverse genetics of 20 candidate genes in Columbia ecotype resulted in seven genes positive for seed longevity (PSAD1, SSLEA, SSTPR, DHAR1, CYP86A8, MYB47 and SPCH) and five negative ones (RBOHD, RBOHE, RBOHF, KNAT7 and SEP3). In this uniform genetic background, natural and accelerated ageing methods provided similar results for seed-longevity in knock-out mutants. The NADPH oxidases (RBOHs), the dehydroascorbate reductase (DHAR1) and the photosystem I subunit (PSAD1) highlight the important role of oxidative stress on seed ageing. The cytochrome P-450 hydroxylase, CYP86A8, and the transcription factors, MYB47, KNAT7 and SEP3, support the protecting role of the seed coat during seed ageing.
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Affiliation(s)
- Joan Renard
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
| | - Regina Niñoles
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
| | - Irene Martínez-Almonacid
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
| | - Beatriz Gayubas
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
| | - Rubén Mateos-Fernández
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
| | - Gaetano Bissoli
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
| | - Eduardo Bueso
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
| | - Ramón Serrano
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
| | - José Gadea
- Instituto de Biología Molecular y Celular de Plantas (IBMCP), Universitat Politècnica de València-C.S.I.C., Valencia, Spain
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Chandler JO, Haas FB, Khan S, Bowden L, Ignatz M, Enfissi EMA, Gawthrop F, Griffiths A, Fraser PD, Rensing SA, Leubner-Metzger G. Rocket Science: The Effect of Spaceflight on Germination Physiology, Ageing, and Transcriptome of Eruca sativa Seeds. Life (Basel) 2020; 10:E49. [PMID: 32344775 PMCID: PMC7235897 DOI: 10.3390/life10040049] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Revised: 04/19/2020] [Accepted: 04/20/2020] [Indexed: 02/07/2023] Open
Abstract
In the 'Rocket Science' project, storage of Eruca sativa (salad rocket) seeds for six months on board the International Space Station resulted in delayed seedling establishment. Here we investigated the physiological and molecular mechanisms underpinning the spaceflight effects on dry seeds. We found that 'Space' seed germination vigor was reduced, and ageing sensitivity increased, but the spaceflight did not compromise seed viability and the development of normal seedlings. Comparative analysis of the transcriptomes (using RNAseq) in dry seeds and upon controlled artificial ageing treatment (CAAT) revealed differentially expressed genes (DEGs) associated with spaceflight and ageing. DEG categories enriched by spaceflight and CAAT included transcription and translation with reduced transcript abundances for 40S and 60S ribosomal subunit genes. Among the 'spaceflight-up' DEGs were heat shock proteins (HSPs), DNAJ-related chaperones, a heat shock factor (HSFA7a-like), and components of several DNA repair pathways (e.g., ATM, DNA ligase 1). The 'response to radiation' category was especially enriched in 'spaceflight-up' DEGs including HSPs, catalases, and the transcription factor HY5. The major finding from the physiological and transcriptome analysis is that spaceflight causes vigor loss and partial ageing during air-dry seed storage, for which space environmental factors and consequences for seed storage during spaceflights are discussed.
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Affiliation(s)
- Jake O. Chandler
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | - Fabian B. Haas
- Plant Cell Biology, Faculty of Biology, University of Marburg, 35043 Marburg, Germany; (F.B.H.); (S.A.R.)
| | - Safina Khan
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | - Laura Bowden
- Official Seed Testing Station for Scotland, SASA, Edinburgh EH12 9FJ, UK;
| | - Michael Ignatz
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | - Eugenia M. A. Enfissi
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | | | - Alistair Griffiths
- Science Department, Royal Horticultural Society, Woking, Surrey GU23 6QB, UK;
| | - Paul D. Fraser
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
| | - Stefan A. Rensing
- Plant Cell Biology, Faculty of Biology, University of Marburg, 35043 Marburg, Germany; (F.B.H.); (S.A.R.)
| | - Gerhard Leubner-Metzger
- Department of Biological Sciences, Royal Holloway University of London, Egham TW20 0EX, UK; (J.O.C.); (S.K.); (M.I.); (E.M.A.E.); (P.D.F.)
- Laboratory of Growth Regulators, Centre of the Region Haná for Biotechnological and Agricultural Research, Institute of Experimental Botany, Academy of Sciences of the Czech Republic, Palaćky University, 78371 Olomouc, Czech Republic
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9
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Pirredda M, González-Benito ME, Martín C, Mira S. Genetic and Epigenetic Stability in Rye Seeds under Different Storage Conditions: Ageing and Oxygen Effect. Plants (Basel) 2020; 9:plants9030393. [PMID: 32210066 PMCID: PMC7154831 DOI: 10.3390/plants9030393] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Revised: 03/16/2020] [Accepted: 03/19/2020] [Indexed: 02/01/2023]
Abstract
Seed ageing is a complex process and can be described as the loss of viability or quality with time. It is important to elucidate whether genetic and epigenetic stability is altered in stored seeds and in seedlings produced from them. Non-stored and stored rye seeds at different stages of ageing were compared, as well as the seedlings obtained from them. Seeds were stored at 35 °C and 15% water content, under vacuum or air atmosphere. DNA of seeds and seedlings was isolated at three stages of the deterioration curve: P75 (13 days), P20 (29 days), and P0 (36 days). Genetic stability was assessed by RAPD technique, and epigenetic changes by MSAP markers. While seeds showed genetic stability after storage, the similarity of seedlings obtained from seeds stored for 29 days was lower (95%) when compared to seedlings from control seeds. Epigenetic changes were between 15% and 30% (both de novo methylation and demethylation) in the stored seeds compared to control seeds, with no differences between 13 and 29 days of storage with either air or vacuum atmospheres. In seedlings, epigenetic changes significantly increased with storage time. In conclusion, ageing increased epigenetic instability in both seeds and seedlings, when compared to controls.
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Affiliation(s)
| | | | | | - Sara Mira
- Correspondence: ; Tel.: +34-91-06-70888
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10
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Antonova K, Vikhnina M, Soboleva A, Mehmood T, Heymich ML, Leonova T, Bankin M, Lukasheva E, Gensberger-Reigl S, Medvedev S, Smolikova G, Pischetsrieder M, Frolov A. Analysis of Chemically Labile Glycation Adducts in Seed Proteins: Case Study of Methylglyoxal-Derived Hydroimidazolone 1 (MG-H1). Int J Mol Sci 2019; 20:E3659. [PMID: 31357424 DOI: 10.3390/ijms20153659] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2018] [Revised: 07/22/2019] [Accepted: 07/24/2019] [Indexed: 12/13/2022] Open
Abstract
Seeds represent the major source of food protein, impacting on both human nutrition and animal feeding. Therefore, seed quality needs to be appropriately addressed in the context of viability and food safety. Indeed, long-term and inappropriate storage of seeds might result in enhancement of protein glycation, which might affect their quality and longevity. Glycation of seed proteins can be probed by exhaustive acid hydrolysis and quantification of the glycation adduct Nɛ-(carboxymethyl)lysine (CML) by liquid chromatography-mass spectrometry (LC-MS). This approach, however, does not allow analysis of thermally and chemically labile glycation adducts, like glyoxal-, methylglyoxal- and 3-deoxyglucosone-derived hydroimidazolones. Although enzymatic hydrolysis might be a good solution in this context, it requires aqueous conditions, which cannot ensure reconstitution of seed protein isolates. Because of this, the complete profiles of seed advanced glycation end products (AGEs) are not characterized so far. Therefore, here we propose the approach, giving access to quantitative solubilization of seed proteins in presence of sodium dodecyl sulfate (SDS) and their quantitative enzymatic hydrolysis prior to removal of SDS by reversed phase solid phase extraction (RP-SPE). Using methylglyoxal-derived hydroimidazolone 1 (MG-H1) as a case example, we demonstrate the applicability of this method for reliable and sensitive LC-MS-based quantification of chemically labile AGEs and its compatibility with bioassays.
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He Y, Xue H, Li Y, Wang X. Nitric oxide alleviates cell death through protein S-nitrosylation and transcriptional regulation during the ageing of elm seeds. J Exp Bot 2018; 69:5141-5155. [PMID: 30053069 PMCID: PMC6184755 DOI: 10.1093/jxb/ery270] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2018] [Accepted: 07/14/2018] [Indexed: 05/23/2023]
Abstract
Seed ageing is a major problem in the conservation of germplasm resources. The involvement of possible signalling molecules during seed deterioration needs to be identified. In this study, we confirmed that nitric oxide (NO), a key signalling molecule in plants, plays a positive role in the resistance of elm seeds to deterioration. To explore which metabolic pathways were affected by NO, an untargeted metabolomic analysis was conducted, and 163 metabolites could respond to both NO and the ageing treatment. The primary altered pathways include glutathione, methionine, and carbohydrate metabolism. The genes involved in glutathione and methionine metabolism were up-regulated by NO at the transcriptional level. Using a biotin switch method, proteins with an NO-dependent post-translational modification were screened during seed deterioration, and 82 putative S-nitrosylated proteins were identified. Eleven of these proteins were involved in carbohydrate metabolism, and the activities of the three enzymes were regulated by NO. In combination, the results of the metabolomic and S-nitrosoproteomic studies demonstrated that NO could activate glycolysis and inhibit the pentose phosphate pathway. In summary, the combination of these results demonstrated that NO could modulate carbohydrate metabolism at the post-translational level and regulate glutathione and methionine metabolism at the transcriptional level. It provides initial insights into the regulatory mechanisms of NO in seed deterioration.
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Affiliation(s)
- Yuqi He
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Haidian District, Beijing, PR China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Haidian District, Beijing, PR China
| | - Hua Xue
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Haidian District, Beijing, PR China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Haidian District, Beijing, PR China
| | - Ying Li
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Haidian District, Beijing, PR China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Haidian District, Beijing, PR China
| | - Xiaofeng Wang
- Beijing Advanced Innovation Center for Tree Breeding by Molecular Design, Beijing Forestry University, Haidian District, Beijing, PR China
- National Engineering Laboratory for Tree Breeding, College of Biological Sciences and Biotechnology, Beijing Forestry University, Haidian District, Beijing, PR China
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Liu X, Chen Z, Liu Q, Gao YN, Zhou WN, Cui XW, Wang QZ. [Effects of ultrasound on the germination and seedling growth of three aged forage seeds.]. Ying Yong Sheng Tai Xue Bao 2018; 29:1857-1866. [PMID: 29974695 DOI: 10.13287/j.1001-9332.201806.008] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
To examine the effects and physiological mechanisms of ultrasound treatment on the germination and seedling growth of naturally aged seeds, an [L9(34)] orthogonal matrix experiment was carried out, which included ultrasound time, ultrasound temperature, output power and seed soaking time with tall fescue Festuca arundinacea stored for one year and five years at room temperature, perennial ryegrass (Lolium perenne, stored for five years), and Russian wildrye (Psathyrostachys juncea, stored for six years) as test materials. The results showed that ultrasound temperature was the most important factor for the germination of aged seeds. The appropriate ultrasound treatment promoted germination percentage and significantly enhanced root and shoot length in aged seeds of tall fescue (stored for five years) and Russian wildrye. The positive effect of ultrasound was not significant on the germination of aged seeds of tall fescue (stored for one year) and perennial ryegrass, but was significant on the root length. Ultrasound treatment reinvigorated aged seeds by increasing superoxide dismutase (SOD) and peroxidase (POD) activities and reducing malondialdehyde (MDA) content. A regression model analysis was performed to determine the final optimal ultrasound condition for aged grass seeds that resulted in ultrasound time of 22 min, at 26 ℃, output power of 254.29 W and a seed soaking time of 2.89 h.
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Affiliation(s)
- Xu Liu
- Department of Grassland Science, College of Animals Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Zhao Chen
- Department of Grassland Science, College of Animals Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Qian Liu
- Department of Grassland Science, College of Animals Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Ya Ni Gao
- Department of Grassland Science, College of Animals Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Wen Nan Zhou
- Department of Grassland Science, College of Animals Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Xue Wen Cui
- Department of Grassland Science, College of Animals Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Quan Zhen Wang
- Department of Grassland Science, College of Animals Science and Technology, Northwest A&F University, Yangling 712100, Shaanxi, China
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Morscher F, Kranner I, Arc E, Bailly C, Roach T. Glutathione redox state, tocochromanols, fatty acids, antioxidant enzymes and protein carbonylation in sunflower seed embryos associated with after-ripening and ageing. Ann Bot 2015; 116:669-78. [PMID: 26346716 PMCID: PMC4578002 DOI: 10.1093/aob/mcv108] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2015] [Revised: 06/01/2015] [Accepted: 06/02/2015] [Indexed: 05/20/2023]
Abstract
BACKGROUND AND AIMS Loss of seed viability has been associated with deteriorative processes that are partly caused by oxidative damage. The breaking of dormancy, a seed trait that prevents germination in unfavourable seasons, has also been associated with oxidative processes. It is neither clear how much overlap exists between these mechanisms nor is the specific roles played by oxygen and reactive oxygen species. METHODS Antioxidant profiles were studied in fresh (dormant) or after-ripened (non-dormant) sunflower (Helianthus annuus) embryos subjected to controlled deterioration at 40 °C and 75 % relative humidity under ambient (21 %) or high O2 (75 %). Changes in seed vigour and viability, dormancy, protein carbonylation and fatty acid composition were also studied. KEY RESULTS After-ripening of embryonic axes was accompanied by a shift in the thiol-based cellular redox environment towards more oxidizing conditions. Controlled deterioration under high O2 led to a faster loss of seed dormancy and significant decreases in glutathione reductase and glutathione peroxidase activities, but viability was lost at the same rate as under ambient O2. Irrespective of O2 concentration, the overall thiol-based cellular redox state increased significantly over 21 d of controlled deterioration to strongly oxidizing conditions and then plateaued, while viability continued to decrease. Viability loss was accompanied by a rapid decrease in glucose-6-phosphate-dehydrogenase, which provides NADPH for reductive processes such as required by glutathione reductase. Protein carbonylation, a marker of protein oxidation, increased strongly in deteriorating seeds. The lipid-soluble tocochromanols, dominated by α-tocopherol, and fatty acid profiles remained stable. CONCLUSIONS After-ripening, dormancy-breaking during ageing and viability loss appeared to be associated with oxidative changes of the cytosolic environment and proteins in the embryonic axis rather than the lipid environment. High O2 concentrations accelerated dormancy alleviation but, surprisingly, did not accelerate the rate of viability loss.
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Affiliation(s)
- F Morscher
- Institute of Botany, Leopold-Franzens-Universität-Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria and
| | - I Kranner
- Institute of Botany, Leopold-Franzens-Universität-Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria and
| | - E Arc
- Institute of Botany, Leopold-Franzens-Universität-Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria and
| | - C Bailly
- Sorbonne Universités, UPMC Univ Paris 06, Institut de Biologie Paris-Seine (IBPS), UMR 7622, F-75005 Paris, France and CNRS, IBPS, UMR 7622, Biologie du développement, F-75005 Paris, France
| | - T Roach
- Institute of Botany, Leopold-Franzens-Universität-Innsbruck, Sternwartestraße 15, 6020 Innsbruck, Austria and
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Michalak M, Plitta-Michalak BP, Naskręt-Barciszewska M, Barciszewski J, Bujarska-Borkowska B, Chmielarz P. Global 5-methylcytosine alterations in DNA during ageing of Quercus robur seeds. Ann Bot 2015; 116:369-76. [PMID: 26133690 PMCID: PMC4549962 DOI: 10.1093/aob/mcv104] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2015] [Accepted: 05/21/2015] [Indexed: 05/05/2023]
Abstract
BACKGROUND AND AIMS Epigenetic regulation plays an important role in the management of plant growth, development and response to stress factors, and several reports have indicated that DNA methylation plays a critical role in seed development and viability. This study examines changes in 5-methylcytosine (m(5)C) levels in the DNA of seeds during ageing, a process that has important implications for plant conservation and agriculture. METHODS Changes in the global level of m(5)C were measured in mature seeds of oak, Quercus robur. The extent of DNA methylation was measured using a protocol based on two-dimensional thin-layer chromatography. Viability of seeds was determined by germination and seedling emergence tests. KEY RESULTS An ageing-related decrease in total m(5)C during storage of recalcitrant seeds was highly and significantly correlated with a decrease in seed viability, as reflected by a reduction in germination (r = 0·8880) and seedling emergence (r = 0·8269). CONCLUSIONS The decrease in viability during ageing of Q. robur seeds is highly correlated with a global decline in the amount of m(5)C in genomic DNA, and it is possible that this may represent a typical response to ageing and senescence in recalcitrant seeds. Potential mechanisms that drive changes in genomic DNA methylation during ageing are discussed, together with their implications for seed viability.
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Affiliation(s)
- Marcin Michalak
- Institute of Dendrology, Polish Academy of Sciences, Parkowa 5, 62-035 Kórnik, Poland and
| | | | | | - Jan Barciszewski
- Institute of Bioorganic Chemistry, Polish Academy of Sciences, Z. Noskowskiego 12/14, 61-704 Poznań, Poland
| | | | - Paweł Chmielarz
- Institute of Dendrology, Polish Academy of Sciences, Parkowa 5, 62-035 Kórnik, Poland and
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15
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Fu YB, Ahmed Z, Diederichsen A. Towards a better monitoring of seed ageing under ex situ seed conservation. Conserv Physiol 2015; 3:cov026. [PMID: 27293711 PMCID: PMC4778438 DOI: 10.1093/conphys/cov026] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2014] [Revised: 06/06/2015] [Accepted: 05/08/2015] [Indexed: 05/22/2023]
Abstract
Long-term conservation of 7.4 million ex situ seed accessions held in agricultural genebanks and botanic gardens worldwide is a challenging mission for human food security and ecosystem services. Recent advances in seed biology and genomics may have opened new opportunities for effective management of seed germplasm under long-term storage. Here, we review the current development of tools for assessing seed ageing and research advances in seed biology and genomics, with a focus on exploring their potential as better tools for monitoring of seed ageing. Seed ageing is found to be associated with the changes reflected in reactive oxygen species and mitochondria-triggered programmed cell deaths, expression of antioxidative genes and DNA and protein repair genes, chromosome telomere lengths, epigenetic regulation of related genes (microRNA and methylation) and altered organelle and nuclear genomes. Among these changes, the signals from mitochondrial and nuclear genomes may show the most promise for use in the development of tools to predict seed ageing. Non-destructive and non-invasive analyses of stored seeds through calorimetry or imaging techniques are also promising. It is clear that research into developing advanced tools for monitoring seed ageing to supplement traditional germination tests will be fruitful for effective conservation of ex situ seed germplasm.
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Affiliation(s)
- Yong-Bi Fu
- Plant Genetic Resources of Canada, Saskatoon Research Centre, Agriculture and Agri-Food Canada, 107 Science Place, Saskatoon, SK, Canada S7N 0X2
| | - Zaheer Ahmed
- Plant Genetic Resources of Canada, Saskatoon Research Centre, Agriculture and Agri-Food Canada, 107 Science Place, Saskatoon, SK, Canada S7N 0X2
| | - Axel Diederichsen
- Plant Genetic Resources of Canada, Saskatoon Research Centre, Agriculture and Agri-Food Canada, 107 Science Place, Saskatoon, SK, Canada S7N 0X2
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16
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Mira S, Estrelles E, González-Benito ME. Effect of water content and temperature on seed longevity of seven Brassicaceae species after 5 years of storage. Plant Biol (Stuttg) 2015; 17:153-62. [PMID: 24804799 DOI: 10.1111/plb.12183] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2013] [Accepted: 02/24/2014] [Indexed: 05/12/2023]
Abstract
Maximising seed longevity is crucial for genetic resource preservation and longevity of orthodox seeds is determined by environmental conditions (water content and temperature). The effect of water content (down to 0.01 g·H₂O·g(-1) ) on seed viability was studied at different temperatures for a 5-year storage period in taxonomically related species. Seeds of seven Brassicaceae species (Brassica repanda, Eruca vesicaria, Malcolmia littorea, Moricandia arvensis, Rorippa nasturtium-aquaticum, Sinapis alba, Sisymbrium runcinatum) were stored at 48 environments comprising a combination of eight water contents, from 0.21 to 0.01 g·H₂O·g(-1) DW and six temperatures (45, 35, 20, 5, -25, -170 °C). Survival curves were modelled and P50 calculated for those conditions where germination was reduced over the 5-year assay period. Critical water content for storage of seeds of six species at 45 °C ranged from 0.02 to 0.03 g·H₂O·g(-1) . The effect of extreme desiccation at 45 °C showed variability among species: three species showed damaging effects of drying below the critical water content, while for three species it was neither detrimental nor beneficial to seed longevity. Lipid content could be related to longevity, depending on the storage conditions. A variable seed longevity response to water content among taxonomically related species was found. The relative position of some of the species as long- or short-lived at 45 °C varied depending on the humidity at which storage behaviour was evaluated. Therefore, predictions of survival under desiccated conditions based on results obtained at high humidity might be problematic for some species.
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Affiliation(s)
- S Mira
- Departamento de Biología Vegetal, E.T.S. Ingenieros Agrónomos, Universidad Politécnica de Madrid, Madrid, Spain
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17
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Long RL, Gorecki MJ, Renton M, Scott JK, Colville L, Goggin DE, Commander LE, Westcott DA, Cherry H, Finch-Savage WE. The ecophysiology of seed persistence: a mechanistic view of the journey to germination or demise. Biol Rev Camb Philos Soc 2014; 90:31-59. [PMID: 24618017 DOI: 10.1111/brv.12095] [Citation(s) in RCA: 134] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2013] [Revised: 01/30/2014] [Accepted: 02/04/2014] [Indexed: 11/28/2022]
Abstract
Seed persistence is the survival of seeds in the environment once they have reached maturity. Seed persistence allows a species, population or genotype to survive long after the death of parent plants, thus distributing genetic diversity through time. The ability to predict seed persistence accurately is critical to inform long-term weed management and flora rehabilitation programs, as well as to allow a greater understanding of plant community dynamics. Indeed, each of the 420000 seed-bearing plant species has a unique set of seed characteristics that determine its propensity to develop a persistent soil seed bank. The duration of seed persistence varies among species and populations, and depends on the physical and physiological characteristics of seeds and how they are affected by the biotic and abiotic environment. An integrated understanding of the ecophysiological mechanisms of seed persistence is essential if we are to improve our ability to predict how long seeds can survive in soils, both now and under future climatic conditions. In this review we present an holistic overview of the seed, species, climate, soil, and other site factors that contribute mechanistically to seed persistence, incorporating physiological, biochemical and ecological perspectives. We focus on current knowledge of the seed and species traits that influence seed longevity under ex situ controlled storage conditions, and explore how this inherent longevity is moderated by changeable biotic and abiotic conditions in situ, both before and after seeds are dispersed. We argue that the persistence of a given seed population in any environment depends on its resistance to exiting the seed bank via germination or death, and on its exposure to environmental conditions that are conducive to those fates. By synthesising knowledge of how the environment affects seeds to determine when and how they leave the soil seed bank into a resistance-exposure model, we provide a new framework for developing experimental and modelling approaches to predict how long seeds will persist in a range of environments.
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Affiliation(s)
- Rowena L Long
- School of Plant Biology, The University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009, Australia; ARC Centre of Excellence in Plant Energy Biology, The University of Western Australia, 35 Stirling Highway, Crawley, Western Australia, 6009, Australia
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18
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Groot SPC, Surki AA, de Vos RCH, Kodde J. Seed storage at elevated partial pressure of oxygen, a fast method for analysing seed ageing under dry conditions. Ann Bot 2012; 110:1149-59. [PMID: 22967856 PMCID: PMC3478056 DOI: 10.1093/aob/mcs198] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2012] [Accepted: 07/18/2012] [Indexed: 05/20/2023]
Abstract
BACKGROUND AND AIMS Despite differences in physiology between dry and relative moist seeds, seed ageing tests most often use a temperature and seed moisture level that are higher than during dry storage used in commercial practice and gene banks. This study aimed to test whether seed ageing under dry conditions can be accelerated by storing under high-pressure oxygen. methods: Dry barley (Hordeum vulgare), cabbage (Brassica oleracea), lettuce (Lactuca sativa) and soybean (Glycine max) seeds were stored between 2 and 7 weeks in steel tanks under 18 MPa partial pressure of oxygen. Storage under high-pressure nitrogen gas or under ambient air pressure served as controls. The method was compared with storage at 45 °C after equilibration at 85 % relative humidity and long-term storage at the laboratory bench. Germination behaviour, seedling morphology and tocopherol levels were assessed. KEY RESULTS The ageing of the dry seeds was indeed accelerated by storing under high-pressure oxygen. The morphological ageing symptoms of the stored seeds resembled those observed after ageing under long-term dry storage conditions. Barley appeared more tolerant of this storage treatment compared with lettuce and soybean. Less-mature harvested cabbage seeds were more sensitive, as was the case for primed compared with non-primed lettuce seeds. Under high-pressure oxygen storage the tocopherol levels of dry seeds decreased, in a linear way with the decline in seed germination, but remained unchanged in seeds deteriorated during storage at 45 °C after equilibration at 85 % RH. CONCLUSIONS Seed storage under high-pressure oxygen offers a novel and relatively fast method to study the physiology and biochemistry of seed ageing at different seed moisture levels and temperatures, including those that are representative of the dry storage conditions as used in gene banks and commercial practice.
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Affiliation(s)
- S P C Groot
- Plant Research International, Wageningen University and Research centre, PO Box 619, 6700 AP Wageningen, The Netherlands.
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19
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Garza-Caligaris LE, Avendaño-Vázquez AO, Alvarado-López S, Zúñiga-Sánchez E, Orozco-Segovia A, Pérez-Ruíz RV, Gamboa-Debuen A. At3g08030 transcript: a molecular marker of seed ageing. Ann Bot 2012; 110:1253-60. [PMID: 22975286 PMCID: PMC3478058 DOI: 10.1093/aob/mcs200] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/01/2012] [Accepted: 07/23/2012] [Indexed: 05/20/2023]
Abstract
BACKGROUND AND AIMS Prolonged storage generally reduces seed viability and vigour, although the rate of deterioration varies among species and environmental conditions. Here, we suggest a possible ageing molecular marker: At3g08030 mRNA. At3g08030 is a member of the DUF642 highly conserved family of cell-wall-associated proteins that is specific for spermatophytes. METHODS At3g08030 expression was performed by RT-PCR and qRT-PCR analysis in seed samples differing in their rate of germination and final germination following a matrix priming and/or controlled deterioration (rapid ageing) treatment. KEY RESULTS The At3g08030 gene transcript was present during the entire Arabidopsis thaliana plant life cycle and in seeds, during maturation, the ripening period and after germination. Matrix priming treatment increased the rate of germination of control seeds and seeds aged by controlled deterioration. Priming treatments also increased At3g08030 expression. To determine whether the orthologues of this gene are also age markers in other plant species, At3g08030 was cloned in two wild species, Ceiba aesculifolia and Wigandia urens. As in A. thaliana, the At3g08030 transcript was not present in aged seeds of the tested species but was present in recently shed seeds. A reduction in germination performance of the aged seeds under salt stress was determined by germination assays. CONCLUSIONS At3g08030 mRNA detection in a dry seed lot has potential for use as a molecular marker for germination performance in a variety of plant species.
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Affiliation(s)
- Luz Elena Garza-Caligaris
- Instituto de Ecología, Universidad Nacional Autónoma de México, Apartado Postal 70-275, Ciudad Universitaria 04510, México, DF México.
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Probert RJ, Daws MI, Hay FR. Ecological correlates of ex situ seed longevity: a comparative study on 195 species. Ann Bot 2009; 104:57-69. [PMID: 19359301 PMCID: PMC2706723 DOI: 10.1093/aob/mcp082] [Citation(s) in RCA: 90] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Affiliation(s)] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/01/2009] [Revised: 02/17/2009] [Accepted: 03/09/2009] [Indexed: 05/20/2023]
Abstract
BACKGROUND AND AIMS Extended seed longevity in the dry state is the basis for the ex situ conservation of 'orthodox' seeds. However, even under identical storage conditions there is wide variation in seed life-span between species. Here, the effects of seed traits and environmental conditions at the site of collection on seed longevity is explored for195 wild species from 71 families from environments ranging from cold deserts to tropical forests. METHODS Seeds were rapidly aged at elevated temperature and relative humidity (either 45 degrees C and 60% RH or 60 degrees C and 60% RH) and regularly sampled for germination. The time taken in storage for viability to fall to 50% (p(50)) was determined using Probit analysis and used as a measure of relative seed longevity between species. KEY RESULTS Across species, p(50) at 45 degrees C and 60% RH varied from 0.1 d to 771 d. Endospermic seeds were, in general, shorter lived than non-endospermic seeds and seeds from hot, dry environments were longer lived than those from cool, wet conditions. These relationships remained significant when controlling for the effects of phylogenetic relatedness using phylogenetically independent contrasts. Seed mass and oil content were not correlated with p(50). CONCLUSIONS The data suggest that the endospermic seeds of early angiosperms which evolved in forest understorey habitats are short-lived. Extended longevity presumably evolved as a response to climatic change or the invasion of drier areas. The apparent short-lived nature of endospermic seeds from cool wet environments may have implications for re-collection and re-testing strategies in ex situ conservation.
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Affiliation(s)
- Robin J Probert
- Seed Conservation Department, Royal Botanic Gardens Kew, Ardingly, West Sussex, UK.
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