1
|
Cascaval D, Galaction AI, Tucaliuc A, Kloetzer L. Direct Extraction of Fumaric Acid from Rhizopus oryzae Suspensions-Interfacial Mass Transfer. Biomolecules 2021; 11:1563. [PMID: 34827561 PMCID: PMC8615409 DOI: 10.3390/biom11111563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2021] [Revised: 10/18/2021] [Accepted: 10/19/2021] [Indexed: 11/16/2022] Open
Abstract
Experimental studies on the reactive extraction of fumaric acid with Amberlite LA-2 from Rhizopus oryzae suspensions using three solvents with different dielectric constants varying from 9.08 to 1.90 (dichloromethane, n-butyl acetate, and n-heptane, respectively) underlined the particular behavior of the extraction system in the presence of fungal biomass. The interfacial mass flow of the reaction product was found to be significantly affected by the biomass, due mainly to its adsorption onto the phase separation interface, this leading to the appearance of a physical barrier against the solute's transfer. However, the magnitude of the adsorption phenomenon was found to depend on Rhizopus oryzae's affinity for the solvent phase, which increased significantly from dichloromethane to n-heptane. The negative influence of the biomass on the interfacial mass transfer can be partially counteracted by adding 1-octanol into the organic phase, improving the solvent's ability to solve the fumaric acid-Amberlite LA-2 complex and simplifying the reactive extraction mechanism, effects that were found to be more important for low-polar solvents. Consequently, for the same mixing intensity, the maximum amplification factor was reached for n-heptane, its value being almost 5-6 times higher than that obtained for dichloromethane and over 2 times higher than that obtained with n-butyl acetate.
Collapse
|
2
|
Chen LC, Lin SY, Sheu MT, Su CH, Lin HL, Hsieh CM. Fabrication and characterization of Rhizochitosan and its incorporation with platelet concentrates to promote wound healing. Carbohydr Polym 2021; 268:118239. [PMID: 34127221 DOI: 10.1016/j.carbpol.2021.118239] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2020] [Revised: 04/12/2021] [Accepted: 05/18/2021] [Indexed: 01/28/2023]
Abstract
Composite dressing composed of Rhizochitosan and Regenplex™ to promote wound healing were assessed. Rhizochitosan was fabricated by deacetylation of Rhizochitin, which obtained by simply depigmenting sporangium-free mycelial mattress produced from Rhizopus stolonifer F6. Physicochemical characterizations of Rhizochitosan demonstrated that it contained 13.5% chitosan with a water-absorption ability of 35-fold dry weight and exhibiting hydrogel nature after hydration. In a wound-healing study on SD rats with full-thickness injury, the composite dressing had a better healing effect than those for each individual components and control group and wound even healed as functional tissue instead of scar tissue. The underlying mechanism of the composite beneficial to wound remodeling is likely attributable to a more reduction level of matrix metalloproteinase (MMP)-9 expression in early stage and a higher MMP-2 expression level in a later stage of healing process. Conclusively, the composite dressing demonstrated to be highly beneficial to the healing of full-thickness injury wound.
Collapse
|
3
|
Stodolak B, Starzyńska-Janiszewska A, Mika M, Wikiera A. Rhizopus oligosporus and Lactobacillus plantarum Co-Fermentation as a Tool for Increasing the Antioxidant Potential of Grass Pea and Flaxseed Oil-Cake Tempe. Molecules 2020; 25:E4759. [PMID: 33081302 PMCID: PMC7587534 DOI: 10.3390/molecules25204759] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Revised: 10/09/2020] [Accepted: 10/14/2020] [Indexed: 11/17/2022] Open
Abstract
Tempe-type fermentation originating from Indonesia can enhance the antioxidant activity of plant material. However, this biological potential depends on substrates and applied microorganisms. This study aimed to determine whether co-fermentation with Rhizopus oligosporus and Lactobacillus plantarum improved antioxidant activity of tempe obtained from grass pea seeds with flaxseed oil-cake addition (up to 30%). For this purpose, substances reacting with Folin-Ciocalteu reagent and free radicals scavenging potential were measured in water-soluble fractions and dialysates from simulated in vitro digestion. Additionally, the water-soluble phenolic profile was estimated. The higher level of water-extractable compounds with antioxidant activity was determined in co-fermentation products than in fungal fermentation products. Moreover, the fermentation process with the use of L. plantarum contributed to a greater accumulation of some phenolic acids (gallic acid, protocatechuic acid) in tempe without having a negative effect on the levels of other phenolic compounds determined in fungal fermented tempe. During in vitro digestion simulating the human digestive tract, more antioxidant compounds were released from products obtained after co-fermentation than fungal fermentation. An addition of 20% flaxseed oil-cake and the application of bacterial-fungal co-fermentation, can be considered as an alternative tool to enhance the antioxidant parameters of grass pea tempe.
Collapse
|
4
|
Carter AC, Petersen CL, Wendt KL, Helff SK, Risinger AL, Mooberry SL, Cichewicz RH. In Situ Ring Contraction and Transformation of the Rhizoxin Macrocycle through an Abiotic Pathway. JOURNAL OF NATURAL PRODUCTS 2019; 82:886-894. [PMID: 30865445 DOI: 10.1021/acs.jnatprod.8b00974] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
A Rhizopus sp. culture containing an endosymbiont partner ( Burkholderia sp.) was obtained through a citizen-science-based soil-collection program. An extract prepared from the pair of organisms exhibited strong inhibition of Ewing sarcoma cells and was selected for bioassay-guided fractionation. This led to the purification of rhizoxin (1), a potent antimitotic agent that inhibited microtubule polymerization, along with several new (2-5) and known (6) analogues of 1. The structures of 2-6 were established using a combination of NMR data analysis, while the configurations of the new stereocenters were determined using ROESY spectroscopy and comparison of GIAO-derived and experimental data for NMR chemical shift and 3 JHH coupling values. Whereas compound 1 showed modest selectivity for Ewing sarcoma cell lines carrying the EWSR1/ FLI1 fusion gene, the other compounds were determined to be inactive. Chemically, compound 2 stands out from other rhizoxin analogues because it is the first member of this class that is reported to contain a one-carbon-smaller 15-membered macrolactone system. Through a combination of experimental and computational tests, we determined that 2 is likely formed via an acid-catalyzed Meinwald rearrangement from 1 because of the mild acidic culture environment created by the Rhizopus sp. isolate and its symbiont.
Collapse
|
5
|
Vieira ER, Xisto MIDDS, Pele MA, Alviano DS, Alviano CS, Barreto-Bergter E, de Campos-Takaki GM. Monohexosylceramides from Rhizopus Species Isolated from Brazilian Caatinga: Chemical Characterization and Evaluation of Their Anti-Biofilm and Antibacterial Activities. Molecules 2018; 23:molecules23061331. [PMID: 29865153 PMCID: PMC6100016 DOI: 10.3390/molecules23061331] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2018] [Revised: 05/24/2018] [Accepted: 05/26/2018] [Indexed: 11/16/2022] Open
Abstract
Monohexosylceramides (CMHs) are highly conserved fungal glycosphingolipids playing a role in several cellular processes such as growth, differentiation and morphological transition. In this study, we report the isolation, purification and chemical characterization of CMHs from Rhizopus stolonifer and R. microspores. Using positive ion mode ESI-MS, two major ion species were observed at m/z 750 and m/z 766, respectively. Both ion species consisted of a glucose/galactose residue attached to a ceramide moiety containing 9-methyl-4,8-sphingadienine with an amidic linkage to a hydroxylated C16:0 fatty acid. The antimicrobial activity of CMH was evaluated against Gram positive and Gram negative bacteria using the agar diffusion assay. CMH from both Rhizopus species inhibited the growth of Bacillus terrae, Micrococcus luteus (M. luteus) and Pseudomonas stutzeri (P. stutzeri) with a MIC50 of 6.25, 6.25 and 3.13 mg/mL, respectively. The bactericidal effect was detected only for M. luteus and P. stutzeri, with MBC values of 25 and 6.25 mg/mL, respectively. Furthermore, the action of CMH on the biofilm produced by methicillin-resistant Staphylococcus aureus (MRSA) was analyzed using 12.5 and 25 mg/mL of CMH from R. microsporus. Total biofilm biomass, biofilm matrix and viability of the cells that form the biofilm structure were evaluated. CMH from R. microsporus was able to inhibit the MRSA biofilm formation in all parameters tested.
Collapse
|
6
|
Yu XW, Yang M, Jiang C, Zhang X, Xu Y. N-Glycosylation Engineering to Improve the Constitutive Expression of Rhizopus oryzae Lipase in Komagataella phaffii. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2017; 65:6009-6015. [PMID: 28681607 DOI: 10.1021/acs.jafc.7b01884] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Our previous studies demonstrated that the N-glycans in Rhizopus chinensis lipase (RCL) was important for its secretion. In order to improve the secretion of Rhizopus oryzae lipase (ROL) under the control of the GAP promoter in Komagataella phaffii, two extra N-glycosylation sites were introduced in ROL according to the position of the N-glycosylation sites of RCL by sequence alignment. The results indicated that the secretion level of ROL was strongly improved by N-glycosylation engineering, and the highest value of extracellular enzyme activity was increased from 0.4 ± 0.2 U/mL to 207 ± 6 U/mL in a shake flask. In the 7-L fermenter, the extracellular enzyme activity of the mutant (2600 ± 43 U/mL) and the total protein concentration (2.5 ± 0.2 g/L) were 218- and 6.25-fold higher than these of the parent, respectively. This study presents a strategy for constitutive recombinant expression of ROL using the GAP promoter combined with N-glycosylation engineering, providing a potential enzyme for application in the food industry.
Collapse
|
7
|
Sutter S, Thevenieau F, Bourdillon A, De Coninck J. Immunomodulatory Properties of Filamentous Fungi Cultivated through Solid-State Fermentation on Rapeseed Meal. Appl Biochem Biotechnol 2016; 182:910-924. [PMID: 27987189 DOI: 10.1007/s12010-016-2370-7] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2016] [Accepted: 12/12/2016] [Indexed: 12/11/2022]
Abstract
Water extracts from solid-state fermentation (SSF) on rapeseed meal using filamentous fungi exhibit interesting immunomodulatory activities in vitro. Immunomodulation was determined by the capacity of the compounds to activate blood neutrophils and to influence cytokine production in human peripheral blood mononuclear cells (PBMC) and mouse bone marrow-derived macrophages (BMDM). Among the strains tested, Aspergillus sojae mycelium and SSF extracts were the most promising in terms of enhancing the immune response. The filamentous fungus was also successfully cultivated in a pre-pilot bioreactor with forced aeration. The results indicated that the extracts not only activated blood neutrophils but also significantly modulated IL-1β cytokine levels with lipopolysaccharide (LPS)-stimulated PBMC and BMDM without any cytotoxicity in immune cells. IL-1β was down-regulated in a dose-dependent manner in the presence of A. sojae crude mycelium and SSF extract with PBMC, which indicated that there was an anti-inflammatory activity, whereas IL-1β secretion was up-regulated in the presence of stimulated BMDM with the highest concentration that was tested (100 μg/mL). The non-fermented rapeseed had no effect at the same concentration. SSF culture, as a natural product, may be a good source for the development of functional feed with an immunostimulating effect or could potentially be used in medicinal applications.
Collapse
|
8
|
Gonzales GB, Smagghe G, Wittevrongel J, Huynh NT, Van Camp J, Raes K. Metabolism of Quercetin and Naringenin by Food-Grade Fungal Inoculum, Rhizopus azygosporus Yuan et Jong (ATCC 48108). JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2016; 64:9263-9267. [PMID: 27960283 DOI: 10.1021/acs.jafc.6b04124] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Rhizopus azygosporus Yuan et Jong (ATCC 48108), a starter culture for fermented soybean tempeh, produces β-glucosidases that cleave flavonoid glycosides into aglycones during fermentation. However, recent data suggest that fermentation of a flavonoid glycoside-rich extract with this strain did not result in the production of aglycones. Thus, in this paper, flavonoid metabolism of this strain was investigated. Incubation of flavonoid aglycones, naringenin and quercetin, with R. azygosporus resulted in the production of flavonoid glucosyl-, hydroxyl-, and sulfo-conjugated derivatives. Naringenin was completely metabolized within 96 h into eriodictyol sulfate and eriodictyol glucoside, whereas quercetin was partially metabolized into quercetin glucoside, diglucoside, sulfate, and glucosyl-sulfate. Most of these metabolites were found to be excreted by the fungi into the culture medium. Toxicity analysis revealed that incubation with both quercetin and naringenin did not exert inhibitory effects on fungal growth. This study presents an interesting mechanism of fungal detoxification of flavonoids in foods.
Collapse
|
9
|
Zhang M, Yu XW, Swapna GVT, Xiao R, Zheng H, Sha C, Xu Y, Montelione GT. Efficient production of (2)H, (13)C, (15)N-enriched industrial enzyme Rhizopus chinensis lipase with native disulfide bonds. Microb Cell Fact 2016; 15:123. [PMID: 27411547 PMCID: PMC4944435 DOI: 10.1186/s12934-016-0522-7] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2016] [Accepted: 07/03/2016] [Indexed: 01/29/2023] Open
Abstract
BACKGROUND In order to use most modern methods of NMR spectroscopy to study protein structure and dynamics, isotope-enriched protein samples are essential. Especially for larger proteins (>20 kDa), perdeuterated and Ile (δ1), Leu, and Val methyl-protonated protein samples are required for suppressing nuclear relaxation to provide improved spectral quality, allowing key backbone and side chain resonance assignments needed for protein structure and dynamics studies. Escherichia coli and Pichia pastoris are two of the most popular expression systems for producing isotope-enriched, recombinant protein samples for NMR investigations. The P. pastoris system can be used to produce (13)C, (15)N-enriched and even (2)H,(13)C, (15)N-enriched protein samples, but efficient methods for producing perdeuterated proteins with Ile (δ1), Leu and Val methyl-protonated groups in P. pastoris are still unavailable. Glycosylation heterogeneity also provides challenges to NMR studies. E. coli expression systems are efficient for overexpressing perdeuterated and Ile (δ1), Leu, Val methyl-protonated protein samples, but are generally not successful for producing secreted eukaryotic proteins with native disulfide bonds. RESULTS The 33 kDa protein-Rhizopus chinensis lipase (RCL), an important industrial enzyme, was produced using both P. pastoris and E. coli BL21 trxB (DE3) systems. Samples produced from both systems exhibit identical native disulfide bond formation and similar 2D NMR spectra, indicating similar native protein folding. The yield of (13)C, (15)N-enriched r27RCL produced using P. pastoris was 1.7 times higher that obtained using E. coli, while the isotope-labeling efficiency was ~15 % lower. Protein samples produced in P. pastoris exhibit O-glycosylation, while the protein samples produced in E. coli were not glycosylated. The specific activity of r27RCL from P. pastoris was ~1.4 times higher than that produced in E. coli. CONCLUSIONS These data demonstrate efficient production of (2)H, (13)C, (15)N-enriched, Ile (δ1), Leu, Val methyl-protonated eukaryotic protein r27RCL with native disulfides using the E. coli BL21 trxB (DE3) system. For certain NMR studies, particularly efforts for resonance assignments, structural studies, and dynamic studies, E. coli provides a cost-effective system for producing isotope-enriched RCL. It should also be potential for producing other (2)H, (13)C, (15)N-enriched, Ile (δ1), Leu, Val methyl-protonated eukaryotic proteins with native disulfide bonds.
Collapse
|
10
|
Ramalingam B, Parandhaman T, Das SK. Antibacterial Effects of Biosynthesized Silver Nanoparticles on Surface Ultrastructure and Nanomechanical Properties of Gram-Negative Bacteria viz. Escherichia coli and Pseudomonas aeruginosa. ACS APPLIED MATERIALS & INTERFACES 2016; 8:4963-4976. [PMID: 26829373 DOI: 10.1021/acsami.6b00161] [Citation(s) in RCA: 258] [Impact Index Per Article: 32.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
Understanding the interactions of silver nanoparticles (AgNPs) with the cell surface is crucial for the evaluation of bactericidal activity and for advanced biomedical and environmental applications. Biosynthesis of AgNPs was carried out through in situ reduction of silver nitrate (AgNO3) by cell free protein of Rhizopus oryzae and the synthesized AgNPs was characterized by UV-vis spectroscopy, high resolution transmission electron microscopy (HRTEM), dynamic light scattering (DLS), ζ-potential analysis, and FTIR spectroscopy. The HRTEM measurement confirmed the formation of 7.1 ± 1.2 nm AgNPs, whereas DLS study demonstrated average hydrodynamic size of AgNPs as 9.1 ± 1.6 nm. The antibacterial activity of the biosynthesized AgNPs (ζ = -17.1 ± 1.2 mV) was evaluated against Gram-negative bacteria such as Escherichia coli and Pseudomonas aeruginosa. The results showed that AgNPs exhibited concentration dependent antibacterial activity and 100% killing of E. coli and P. aeruginosa achieved when the cells were treated with 4.5 and 2.7 μg/mL AgNPs, respectively for 4 h. Furthermore, the intracellular reactive oxygen species (ROS) production suppressed the antioxidant defense and exerted mechanical damage to the membrane. AgNPs also induced surface charge neutralization and altered of the cell membrane permeability causing nonviability of the cells. Atomic force microscopy (AFM) studies depicted alteration of ultrastructural and nanomechanical properties of the cell surface following interaction with AgNPs, whereas FTIR spectroscopic analysis demonstrated that cell membrane of the treated cells underwent an order-to-disorder transition during the killing process and chemical composition of the cell membrane including fatty acids, proteins, and carbohydrates was decomposed following interaction with AgNPs.
Collapse
|
11
|
Zhang H, Huang Y, Fu Y. [Effects of pellet characteristics on L-lactic acid fermentation by Rhizopus oryzae]. WEI SHENG WU XUE BAO = ACTA MICROBIOLOGICA SINICA 2015; 55:372-378. [PMID: 26065280] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
OBJECTIVE Effects of pellet morphology, diameter, density, and interior structure on L-lactic acid fermentation by Rhizopus oryzae were characterized for different inoculum sizes and concentrations of peptone and CaCO3. METHODS Different initial spore concentrations were inoculated in the preculture medium with different peptone and CaCO3 concentrations, and cultivated at 30 degrees C for 36 h. Representative pellets were chosen for interior structure analysis and L-lactic acid production. RESULTS Inoculum size was the most important factor determining pellet formation and diameter. Peptone concentration had the greatest effect on pellet density. L-lactic acid production depended heavily on pellet density but not on pellet diameter. Low-density pellets formed easily under conditions of low peptone concentration and often had a relatively hollow structure. This structure greatly decreased production. The production of L-lactic acid increased until the density reached a certain level (50 - 60 kg/m3) , which the compact part distributed homogeneously in the thick outer layer of the pellet, and loose in the central layer. Homogeneously structured, denser pellets limited mass transfer. CaCO, concentration only had a slight influence on pellet diameter and density. CONCLUSION This work provides the insight into pellet structure and its relationship with productivity.
Collapse
|
12
|
Gaur R, Darokar MP, Ajayakumar PV, Shukla RS, Bhakuni RS. In vitro antimalarial studies of novel artemisinin biotransformed products and its derivatives. PHYTOCHEMISTRY 2014; 107:135-140. [PMID: 25183484 DOI: 10.1016/j.phytochem.2014.08.004] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2014] [Revised: 07/28/2014] [Accepted: 08/04/2014] [Indexed: 06/03/2023]
Abstract
Biotransformation of antimalarial drug artemisinin by fungi Rhizopus stolonifer afforded three sesquiterpenoid derivatives. The transformed products were 1α-hydroxyartemisinin (3), 3.0%, a new compound, 10β-hydroxyartemisinin, 54.5% (4) and deoxyartemisinin (2) in 9% yield. The fungus expressed high-metabolism activity (66.5%). The chemical structures of the compounds were elucidated by 1D, 2D NMR spectrometry and mass spectral data. The major compound 10β-hydroxyartemisinin (4) was chemically converted to five new derivatives 5-9. All the compounds 3-9 were subjected for in vitro anti-malarial activity. 10β-Hydroxy-12β-arteether (8), IC50 at 18.29nM was found to be 10 times better active than its precursor 4 (184.56nM) and equipotent antimalarial with natural drug artemisinin whereas the α-derivative 9 is 3 times better than 4 under in vitro conditions. Therefore, the major biotransformation product 4 can be exploited for further modification into new clinically potent molecules. The results show the versatility of microbial-catalyzed biotransformations leading to the introduction of a hydroxyl group at tertiary position in artemisinin in derivative (3).
Collapse
|
13
|
Sellami M, Kedachi S, Frikha F, Miled N, Ben Rebah F. Optimization of marine waste based-growth media for microbial lipase production using mixture design methodology. ENVIRONMENTAL TECHNOLOGY 2013; 34:2259-2266. [PMID: 24350480 DOI: 10.1080/09593330.2013.765920] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Lipase production by Staphylococcus xylosus and Rhizopus oryzae was investigated using a culture medium based on a mixture of synthetic medium and supernatants generated from tuna by-products and Ulva rigida biomass. The proportion of the three medium components was optimized using the simplex-centroid mixture design method (SCMD). Results indicated that the experimental data were in good agreement with predicted values, indicating that SCMD was a reliable method for determining the optimum mixture proportion of the growth medium. Maximal lipase activities of 12.5 and 23.5 IU/mL were obtained with a 50:50 (v:v) mixture of synthetic medium and tuna by-product supernatant for Staphylococcus xylosus and Rhizopus oryzae, respectively. The predicted responses from these mixture proportions were also validated experimentally.
Collapse
|
14
|
Abstract
The production of heterologous lipases is one of the most promising strategies to increase the productivity of the bioprocesses and to reduce costs, with the final objective that more industrial lipase applications could be implemented. In this chapter, an overview of the most common microbial expression systems for the overproduction of microbial lipases is presented. Prokaryotic system as Escherichia coli and eukaryotic systems as Saccharomyces cerevisiae and Pichia pastoris are analyzed and compared in terms of productivity, operational, and downstream processing facilities. Finally, an overview of heterologous Candida rugosa and Rhizopus oryzae lipases, two of the most common lipases used in biocatalysis, is presented. In both cases, P. pastoris has been shown as the most promising host system.
Collapse
|
15
|
Simons R, Vincken JP, Bohin MC, Kuijpers TFM, Verbruggen MA, Gruppen H. Identification of prenylated pterocarpans and other isoflavonoids in Rhizopus spp. elicited soya bean seedlings by electrospray ionisation mass spectrometry. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2011; 25:55-65. [PMID: 21154654 DOI: 10.1002/rcm.4826] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/30/2023]
Abstract
Phytoalexins from soya are mainly characterised as prenylated pterocarpans, the glyceollins. Extracts of non-soaked and soaked soya beans, as well as that of soya seedlings, grown in the presence of Rhizopus microsporus var. oryzae, were screened for the presence of prenylated flavonoids with a liquid chromatography/mass spectrometry (LC/MS)-based screening method. The glyceollins I-III and glyceollidins I-II, belonging to the isoflavonoid subclass of the pterocarpans, were tentatively assigned. The formation of these prenylated pterocarpans was accompanied by that of other prenylated isoflavonoids of the subclasses of the isoflavones and the coumestans. It was estimated that approx. 40% of the total isoflavonoid content in Rhizopus-challenged soya bean seedlings were prenylated pterocarpans, whereas 7% comprised prenylated isoflavones and prenylated coumestans. The site of prenylation (A-ring or B-ring) of the prenylated isoflavones was tentatively annotated using positive-ion mode MS by comparing the (1,3) A(+) retro-Diels-Alder (RDA) fragments of prenylated and non-prenylated isoflavones. Furthermore, the fragmentation pathways of the five pterocarpans in negative-ion (NI) mode were proposed, which involved the cleavage of the C-ring and/or D-ring. The absence of the ring-closed prenyl (pyran or furan) gave exclusively -H(2) O(x,y) RDA fragments, whereas its presence gave predominantly the common RDA fragments.
Collapse
|
16
|
Tsekova K, Ganeva S, Hristov A, Todorova D, Beschkov V. Simultaneous copper, cobalt and phenol removal from aqueous solutions by alternating biosorption and biodegradation. WATER SCIENCE AND TECHNOLOGY : A JOURNAL OF THE INTERNATIONAL ASSOCIATION ON WATER POLLUTION RESEARCH 2011; 63:2388-2394. [PMID: 21977665 DOI: 10.2166/wst.2011.464] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
A strategy for removal of heavy metals and phenol from wastewaters is proposed. It involves consecutive cation biosorption by fungi, phenol biodegradation by the yeast association Candida sp. 2326 + Candida sp. 2327 and regeneration. Copper and cobalt removal from aqueous solutions containing 80-120 mg/L phenol by biosorption, using Rhizopus archizus cells immobilized onto poly (vinyl alcohol), was investigated by conducting a series of batch experiments. The removal efficiencies were 81% for Cu and 5% for Co. The residual concentrations of Cu (1.9 mg/L) and of Co (9.5 mg/L) did not change the biodegradation dynamics of phenol. A quantitative biodegradation of 120 mg/L phenol proceeded within 22 h. After biodegradation of phenol, the removal efficiencies achieved by biosorption after regeneration were 90% for Cu and 44% for Co. It was found that copper and cobalt form positively charged complexes with phenol. This complex formation hinders the retention of Cu and Co by the biosorbent and reduces the uptake of their cations.
Collapse
|
17
|
Aksu Z, Balibek E. Effect of salinity on metal-complex dye biosorption by Rhizopus arrhizus. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2010; 91:1546-1555. [PMID: 20347210 DOI: 10.1016/j.jenvman.2010.02.026] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2009] [Revised: 02/08/2010] [Accepted: 02/20/2010] [Indexed: 05/29/2023]
Abstract
In this study the biosorption of Yellow RL, a metal-complex anionic dye, by dried Rhizopus arrhizus, a filamentous fungus, was investigated as a function of initial solution pH, initial dye concentration and initial salt (sodium chloride) concentration. The fungus exhibited the maximal dye uptake at pH 2 in the absence and in the presence of salt. Dye uptake increased with the dye concentration up to 1000 mg l(-1) and diminished considerably in the presence of increasing concentrations of salt up to 50 g l(-1). The fungus biosorbed 85.4 mg dye g(-1)of dried biomass at 100 mg l(-1) initial dye concentration in the absence of salt. When 50 g l(-1) salt was added to the biosorption medium, this value dropped to 60.8 mg g(-1) resulting in 28.8% reduction in biosorption capacity. The Redlich-Peterson and Langmuir-Freundlich were the most suitable adsorption models for describing the biosorption equilibrium data of the dye both individually and in salt containing medium. The pseudo-second-order and saturation type kinetic models depicted the biosorption kinetics accurately for all cases studied. Equilibrium and kinetic constants varied with the level of salt were expressed as a function of salt concentration.
Collapse
|
18
|
Das SK, Das AR, Guha AK. Microbial synthesis of multishaped gold nanostructures. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2010; 6:1012-21. [PMID: 20376859 DOI: 10.1002/smll.200902011] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
The development of methodologies for the synthesis of nanoparticles of well-defined size and shape is a challenging one and constitutes an important area of research in nanotechnology. This Full Paper describes the controlled synthesis of multishaped gold nanoparticles at room temperature utilizing a simple, green chemical method by the interaction of chloroauric acid (HAuCl4 x 3H20) and cell-free extract of the fungal strain Rhizopus oryzae. The cell-free extract functions as a reducing, shape-directing, as well as stabilizing, agent. Different shapes of gold nanocrystals, for example, triangular, hexagonal, pentagonal, spherical, spheroidal, urchinlike, two-dimensional nanowires, and nanorods, are generated by manipulating key growth parameters, such as gold ion concentration, solution pH, and reaction time. The synthesized nanostructures are characterized by UV/Vis and Fourier-transform infrared spectroscopy, transmission electron microscopy, and energy dispersive X-ray analysis studies. Electron diffraction patterns reveal the crystalline nature of the nanoparticles and a probable mechanism is proposed for the formation of the different structural entities.
Collapse
|
19
|
Wang F, Zhu T, Zhang M, Lin A, Zhu W, Gu Q. Structural determination of aspericins A-C, new furan and pyran derivates from the marine-derived fungus Rhizopus sp. 2-PDA-61, by 1D and 2D NMR spectroscopy. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2010; 48:155-158. [PMID: 19937604 DOI: 10.1002/mrc.2545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
Three new furan and pyran derivatives named aspericins A-C (1-3), as well as a known asperic acid (4), have been isolated from the marine-derived fungus Rhizopus sp. 2-PDA-61. The complete (1)H and (13)C NMR assignments for the new compounds were carried out using (1)H, (13)C, DEPT, COSY, HMQC, HMBC, and NOESY NMR experiments. Compounds 1-3 were evaluated for their cytotoxic activities on P388, A549, HL-60, and BEL-7420 cell lines by the MTT and SRB methods.
Collapse
|
20
|
Chen CC, Cho YC, Lai CC, Hsu WH. Purification and characterization of a new Rhizopuspepsin from Rhizopus oryzae NBRC 4749. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2009; 57:6742-6747. [PMID: 19722576 DOI: 10.1021/jf8040337] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
A secretory aspartic protease (also termed as rhizopuspepsin) was purified from Rhizopus oryzae NBRC 4749 by ion exchange chromatography with a yield of 45%. The enzyme was a nonglycoprotein with a molecular mass of 37 kDa as determined by SDS-PAGE analysis. N-terminal sequence and LC-MS/MS analyses revealed that this rhizopuspepsin corresponded to the hypothetical protein RO3G_12822.1 in the R. oryzae genome database. Comparison of genomic and cDNA genes demonstrated that the rhizopuspepsin contained two introns, whereas only one intron was reported in other rhizopuspepsin genes. Phylogenetic analysis also indicated that this rhizopuspepsin was distinct from other rhizopuspepsins. The temperature and pH optima for the purified rhizopuspepsin were 50 degrees C and pH 3.0, respectively, and a half-life of about 3.5 h was observed at 40 degrees C. The enzyme preferentially cleaved the peptides with hydrophobic and basic amino acids in the P1 site but had no activity for the Glu, Pro, Trp, and aliphatic amino acids containing the beta-branch side chain.
Collapse
|
21
|
Li H, Li Z, Liu T, Xiao X, Peng Z, Deng L. A novel technology for biosorption and recovery hexavalent chromium in wastewater by bio-functional magnetic beads. BIORESOURCE TECHNOLOGY 2008; 99:6271-6279. [PMID: 18221868 DOI: 10.1016/j.biortech.2007.12.002] [Citation(s) in RCA: 72] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2007] [Revised: 11/26/2007] [Accepted: 12/01/2007] [Indexed: 05/25/2023]
Abstract
The goal of this study was to develop an applied technique for the removal and recovery of heavy metal in wastewater. It is novel that the Cr(VI) could be adsorbed and recovered by bio-functional magnetic beads. Furthermore, the magnetic separation technology would make their separation more convenient. The beads were constituted by the powder of Rhizopus cohnii and Fe(3)O(4) particles coated with alginate and polyvinyl alcohol (PVA). The parameters effecting Cr(VI) removal were obtained: the optimum pH 1.0 and optimum temperature 28 degrees C. The biosorption took place mainly in form of Cr(VI) and R. cohnii biomass played a key role in Cr(VI) adsorption. The model of Langmuir isotherm and Lagergren could be better used to fit the sorption process and kinetics, respectively. The beads still maintained predominant characteristics of adsorption, recovery and magnetism after five cycles for adsorption-desorption. The mechanism of adsorption was gained by Fourier transform infrared spectroscopy (FTIR), raman spectroscopy (RS) and scanning electron microscopy (SEM). The groups of -NH(3)(+), -NH(2)(+)-, and NH- played an important role in the Cr(VI) adsorption. Consequently, the beads exhibited the superior performances in Cr(VI) cleanup, separation and recovery and the perspective potential in application.
Collapse
|
22
|
Wang F, Fang Y, Zhang M, Lin A, Zhu T, Gu Q, Zhu W. Six new ergosterols from the marine-derived fungus Rhizopus sp. Steroids 2008; 73:19-26. [PMID: 17900642 DOI: 10.1016/j.steroids.2007.08.008] [Citation(s) in RCA: 44] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/10/2007] [Revised: 08/14/2007] [Accepted: 08/17/2007] [Indexed: 11/27/2022]
Abstract
Six new ergosterols, including 3beta-hydroxyl-(22E, 24R)-ergosta-5,8,22-trien-7,15-dione (1), 3beta-hydroxyl-(22E, 24R)-ergosta-5,8,14,22-tetraen-7-one (2), 3beta,15beta-dihydroxyl-(22E, 24R)-ergosta-5,8(14),22-trien-7-one (3), 3beta,15alpha-dihydroxyl-(22E, 24R)-ergosta-5,8(14),22-trien-7-one (4), 3beta-hydroxyl-(22E, 24R)-ergosta-5,8(14),22-trien-7,15-dione (5), and 5alpha,8alpha-epidioxy-23,24(R)-dimethylcholesta-6,9(11),22-trien-3beta-ol (6), have been isolated from the marine-derived fungus Rhizopus sp., along with four known ones (7-10). The structures of the new compounds were determined on the basis of extensive spectroscopic data. All compounds were evaluated for their cytotoxic activities on P388, A549, HL-60, and BEL-7420 cell lines by the MTT and SRB methods.
Collapse
|
23
|
Aksu Z, Balibek E. Chromium(VI) biosorption by dried Rhizopus arrhizus: effect of salt (NaCl) concentration on equilibrium and kinetic parameters. JOURNAL OF HAZARDOUS MATERIALS 2007; 145:210-20. [PMID: 17188810 DOI: 10.1016/j.jhazmat.2006.11.011] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2006] [Revised: 11/08/2006] [Accepted: 11/08/2006] [Indexed: 05/13/2023]
Abstract
Some industrial wastewaters contain high quantities of salts besides heavy metal ions. The presence of salt ions leads to high ionic strength, which may significantly affect the performance of the biosorption process so the effect of salts on the biosorption of heavy metal ions should be investigated. In this study the biosorption of chromium(VI) from saline solutions on dried Rhizopus arrhizus was studied as a function of pH, initial chromium(VI) and salt (NaCl) concentrations in a batch system. The biosorption capacity of R. arrhizus strongly depended on solution pH and maximum chromium(VI) sorption capacity of sorbent was obtained at pH 2.0 both in the absence and in the presence of increasing concentrations of salt. Chromium(VI)-salt biosorption studies were performed at this pH value. Equilibrium uptakes of chromium(VI) increased with increasing chromium(VI) concentration up to 250mgl(-1) and decreased considerably by the presence of increasing concentrations of salt. At 100mgl(-1), initial chromium(VI) concentration, dried R. arrhizus biosorbed 78.0mgg(-1) of chromium(VI) in 72h without salt medium. When salt concentration was raised to 50gl(-1), this value dropped to 64.0mgg(-1) of chromium(VI) at the same conditions resulting in 17.9% decrease of biosorption capacity. The equilibrium sorption data were analysed by using Freundlich, Langmuir, Redlich-Peterson and Langmuir-Freundlich (Sips), the two and three parameters adsorption models, using non-linear regression technique and isotherm constants were evaluated depending on salt concentration. The Langmuir-Freundlich (Sips) was the best suitable adsorption model for describing the biosorption of chromium(VI) individually and in salt-containing medium. Pseudo-first-order, pseudo-second-order and saturation type kinetic models described the biosorption kinetics accurately at all chromium(VI) concentrations in the absence and in the presence of changing concentrations of salt. Isotherm and saturation type kinetic constants varied due to the level of salt were expressed as a function of initial salt concentration.
Collapse
|
24
|
Preetha B, Viruthagiri T. Application of response surface methodology for the biosorption of copper using Rhizopus arrhizus. JOURNAL OF HAZARDOUS MATERIALS 2007; 143:506-10. [PMID: 17084526 DOI: 10.1016/j.jhazmat.2006.09.077] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2006] [Revised: 08/05/2006] [Accepted: 09/21/2006] [Indexed: 05/12/2023]
Abstract
Response surface methodology was used to study the cumulative effect of the various parameters namely, initial copper ion concentration, pH, temperature, biomass loading and to optimize the process conditions for the maximum removal of copper. For obtaining the mutual interaction between the variables and optimizing these variables, a 2(4) full factorial central composite design using response surface methodology was employed. The analysis of variance (ANOVA) of the quadratic model demonstrates that the model was highly significant. The model was statistically tested and verified by experimentation. A maximum copper removal of 98% was obtained using the biosorption kinetics of copper under optimum conditions.
Collapse
|
25
|
Aksu Z, Cağatay SS, Gönen F. Continuous fixed bed biosorption of reactive dyes by dried Rhizopus arrhizus: determination of column capacity. JOURNAL OF HAZARDOUS MATERIALS 2007; 143:362-71. [PMID: 17070992 DOI: 10.1016/j.jhazmat.2006.09.039] [Citation(s) in RCA: 48] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2006] [Revised: 08/22/2006] [Accepted: 09/14/2006] [Indexed: 05/12/2023]
Abstract
A continuous fixed bed study was carried out by using dried Rhizopus arrhizus as a biosorbent for the removal of three reactive dyes; Gemacion (Procion) Red H-E7B (GR), a monoclorotriazine mono-azo type reactive dye; Gemazol Turquise Blue-G (GTB), a vinyl sulfone mono-azo type reactive dye and Gemactive (Reactive) Black HFGR (GB), a vinyl sulfone di-azo type reactive dye from aqueous solution. The effect of operating parameters such as flow rate and inlet dye concentration on the sorption characteristics of R. arrhizus was investigated at pH 2.0 and at 25 degrees C for each dye. Data confirmed that the total amount of sorbed dye decreased with increasing flow rate and increased with increasing inlet dye concentration for each dye. The column biosorption capacity of dried R. arrhizus was 1007.8 mg g(-1) for GR dye, 823.8 mg g(-1) for GTB dye and 635.7 mg g(-1) for GB dye at the highest inlet dye concentration of approximately 750 mg l(-1) and at the minimum flow rate of 0.8 ml min(-1). Thomas and Yoon-Nelson models were applied to experimental data to predict the breakthrough curves and to determine the biosorption capacity of the column for each dye useful for process design. Both models were found suitable for describing the whole dynamic behavior of the column with respect to flow rate and inlet dye concentration.
Collapse
|