Molecular interactions of polyvinyl chloride microplastics and beta-blockers (Diltiazem and Bisoprolol) and their effects on marine meiofauna: Combined in vivo and modeling study

The ecotoxicological effects of beta-blockers (i.e. Diltiazem and Bisoprolol) and their interactions with the microplastic polyvinyl chloride on marine meiofauna were tested in laboratory microcosms. An experimental factorial design was applied, using meiobenthic fauna collected from the Old Harbor of Bizerte (NE Tunisia), but with a main focus on the nematode communities. The meiobenthic invertebrates were exposed to two concentrations of Diltiazem and Bisoprolol, of 1.8 µg.L^-1 and 1.8 mg.L^-1, respectively, and one concentration of polyvinyl chloride (i.e. 20 mg.kg^-1), separately and mixed. The overall meiofauna abundance was significantly reduced in all treatments, mainly that of polychaetes and amphipods. Moreover, the juveniles-gravid female ratios of the nematode communities were the lowest in the 1.8 µg.L^-1 Bisoprolol treatment and for the 1.8 mg.L^-1 mixture of Diltiazem and microplastics, suggesting that different dosages influence the maturity status of the examined species. The demographic results were also supported by in silico approach. The simulation of molecular interactions revealed acceptable binding affinities (up to -8.1 kcal/mol) and interactions with key residues in the germ line development protein 3 and sex-determining protein from Coenorhabditis elegans. Overall, the experimental outcome strongly indicates synergistic interactions among the beta-blockers Diltiazem and Bisoprolol and the microplastic polyvinyl chloride on marine nematode communities.

Functional diversity in the intertidal macrobenthic community at sewage-affected shores from Southwestern Atlantic

Sewage pollution effect in a coastal area of the Southwestern Atlantic was tested, through the use of analysis of biological traits (BTA) and functional indices. Changes in the macrobenthic functional structure between the sewage outfall site and remote sites were observed. At the site in the discharge point, functional features related to organic enrichment were observed, such as deposit feeders, burrow dwellers and inhabitants of tubes, with low relative mobility and opportunistic species of the first and the second order. The functional indexes (Evenness, Dispersion, and Functional Specialization) showed the highest values in the sites far from the discharge point. The AMBI was positively correlated with FRic and negatively with FEve and FSpe. The opposite occurred with the M-AMBI. BTA and functional indices showed the changes that occurred due to sewage impacts in the benthic assemblages on rocky coasts in SW Atlantic. Sewage pollution effect in a coastal area of the Southwestern Atlantic was tested, through the use of functional diversity metrics (analysis of biological traits and functional indices). Biological samples were taken during spring and autumn (2015-2016), in four sampling sites distributed at different distances from the sewage outfall. Changes in the macrobenthic functional structure between the sewage outfall site and remote sites were observed. The functional indexes (Evenness, Dispersion, and Functional Specialization) showed the highest values in the sites far from the discharge point. Correlations between functional and environmental quality indices (AMBI and M-AMBI) were significant. The AMBI was positively correlated with Functional Richness and negatively with Functional Evenness and Functional Specialization. The opposite occurred with the M-AMBI. The analysis of biological traits and functional diversity indices represent informative and useful tools to describe the different aspects of sewage impacts in the benthic assemblages on rocky coasts in SW Atlantic. At the site in the discharge point, functional features related to organic enrichment were observed, such as deposit feeders, burrow dwellers and inhabitants of tubes, with low relative mobility and opportunistic species of the first and the second order.

Population differentiation in a Mediterranean relict shrub: the potential role of local adaptation for coping with climate change

Plants can respond to climate change by either migrating, adapting to the new conditions or going extinct. Relict plant species of limited distribution can be especially vulnerable as they are usually composed of small and isolated populations, which may reduce their ability to cope with rapidly changing environmental conditions. The aim of this study was to assess the vulnerability of Cneorum tricoccon L. (Cneoraceae), a Mediterranean relict shrub of limited distribution, to a future drier climate. We evaluated population differentiation in functional traits related to drought tolerance across seven representative populations of the species' range. We measured morphological and physiological traits in both the field and the greenhouse under three water availability levels. Large phenotypic differences among populations were found under field conditions. All populations responded plastically to simulated drought, but they differed in mean trait values as well as in the slope of the phenotypic response. Particularly, dry-edge populations exhibited multiple functional traits that favored drought tolerance, such as more sclerophyllous leaves, strong stomatal control but high photosynthetic rates, which increases water use efficiency (iWUE), and an enhanced ability to accumulate sugars as osmolytes. Although drought decreased RGR in all populations, this reduction was smaller for populations from the dry edge. Our results suggest that dry-edge populations of this relict species are well adapted to drought, which could potentially mitigate the species' extinction risk under drier scenarios. Dry-edge populations not only have a great conservation value but can also change expectations from current species' distribution models.

Plant functional traits regulate soil bacterial diversity across temperate deserts

Despite the known influence of plant diversity on soil microbial diversity, the potential role of plant functional traits in regulating soil bacterial diversity remains largely unclear. There is a lack of strong empirical evidence for the relative effects of plant diversity and functional traits on soil bacterial diversity across large-scale deserts. Here, we simultaneously explore the internal links among plant diversity, functional traits and soil bacterial diversity across 90 temperate deserts habitat of China, after accounting for confounding abiotic and spatial factors. The results showed that soil bacterial alpha and beta diversities were mainly determined by abiotic and spatial factors, follow by plant factors. However, plant diversity and functional traits played diverse roles in shaping soil bacterial alpha and beta diversities. Plant diversity exerted a substantial influence on soil bacterial beta diversity, but not on alpha diversity. In contrast, plant functional traits still directly influenced soil bacterial alpha and beta diversity, after accounting for other confounding key drivers. More precisely, plant functional traits surpass plant diversity in affecting soil bacterial alpha diversity. These results provide robust evidence that plant functional traits can effectively regulate soil bacterial diversity across temperate deserts. Taken together, we highlight the importance and irreplaceability of plant functional traits in predicting soil biodiversity under current and future global environmental changes.

Nematode traits after separate and simultaneous exposure to Polycyclic Aromatic Hydrocarbons (anthracene, pyrene and benzo[a]pyrene) in closed and open microcosms

The majority of experimental studies carried out to date, regarding the effects of pollutants on meiofauna have been conducted by means of closed systems, and rarely using open ones. The current work explored the impact of three Polycyclic Aromatic Hydrocarbons (PAHs), anthracene, pyrene and benzo[a]pyrene, applied alone or combined, on meiobenthic nematodes using both systems. The results revealed that single PAHs impacted the nematofauna similarly in closed or open systems with a higher toxicity observed for benzo[a]pyrene. However, the closed microcosms contaminated with PAHs became organically enriched, resulting in more non-selective deposit feeders and omnivores-carnivores. Taxonomic and functional effects related to combinations of PAHs were close to those of individual treatments in closed systems, however, for open ones, the outcomes were different. The caudal morphology influenced the response of taxa during their avoidance/endurance of hydrocarbons in open systems where the effects of PAHs mixtures appeared not only additive but also synergetic. Based on the results of the study, the use of open systems is preferred to closed ones as the research outcomes were more accurate and representing better conditions prevailing in nature.

Evaluating green infrastructure in urban environments using a multi-taxa and functional diversity approach

Forested areas within cities host a large number of species, responsible for many ecosystem services in urban areas. The biodiversity in these areas is influenced by human disturbances such as atmospheric pollution and urban heat island effect. To ameliorate the effects of these factors, an increase in urban green areas is often considered sufficient. However, this approach assumes that all types of green cover have the same importance for species. Our aim was to show that not all forested green areas are equal in importance for species, but that based on a multi-taxa and functional diversity approach it is possible to value green infrastructure in urban environments. After evaluating the diversity of lichens, butterflies and other-arthropods, birds and mammals in 31 Mediterranean urban forests in south-west Europe (Almada, Portugal), bird and lichen functional groups responsive to urbanization were found. A community shift (tolerant species replacing sensitive ones) along the urbanization gradient was found, and this must be considered when using these groups as indicators of the effect of urbanization. Bird and lichen functional groups were then analyzed together with the characteristics of the forests and their surroundings. Our results showed that, contrary to previous assumptions, vegetation density and more importantly the amount of urban areas around the forest (matrix), are more important for biodiversity than forest quantity alone. This indicated that not all types of forested green areas have the same importance for biodiversity. An index of forest functional diversity was then calculated for all sampled forests of the area. This could help decision-makers to improve the management of urban green infrastructures with the goal of increasing functionality and ultimately ecosystem services in urban areas.

Abundant and rare microbial sub-communities in anammox granules present contrasting assemblage patterns and metabolic functions in response to inorganic carbon stresses

Nitrogen-transforming microorganisms play pivotal roles for the microbial nitrogen-cycling network in the anammox granular system. However, little is known about the effects of inorganic carbon (IC) stresses on the assemblage patterns and functional profiles of abundant and rare taxa. Herein, the community assemblage and functional traits of abundant and rare sub-communities were investigated. Results revealed that insufficient IC had adverse influences on the process performance, while anammox activity could be recovered by IC addition. Co-occurrence network analysis indicated that abundant and rare sub-communities present divergent co-occurrence patterns. Additionally, environmental filtering had different influences on the ecological adaptability of bacterial sub-communities. Furthermore, qPCR results illustrated that NH₄⁺-N and NO₂^--N consumption were regulated by abundant sub-community, while their accumulation was mediated by rare sub-community. Collectively, these findings suggest that abundant and rare sub-communities present contrasting assemblage patterns and metabolic pathways, and functional profiles dominated selection of bacterial sub-communities under IC stresses.

Composition and function of rhizosphere microbiome of Panax notoginseng with discrepant yields

Background

Panax notoginseng is a highly valuable medicinal plant. Reduced P. notoginseng yield is a common and serious problem that arises in a continuous cropping system. Variation in the composition and function of soil microbial community is considered the primary cause of yield reduction.

Methods

This study used shotgun metagenomic sequencing approaches to describe the taxonomic and functional features of P. notoginseng rhizosphere microbiome and screen microbial taxa and functional traits related to yields.

Results

At the family and genus level, a total of 43 families and 45 genera (relative abundance > 0.1%) were obtained, and the correlation with the yield of P. notoginseng was further analyzed. Nitrosomonadaceae, Xanthomonadaceae, Mycobacterium and Arthrobacter that were enriched in soils with higher yields were positively correlated with P. notoginseng yields, thereby suggesting that they might increase yields. Negative correlation coefficients indicated that Xanthobacteraceae, Caulobacteraceae, Oxalobacteraceae, Chitinophagaceae, Sphingomonas, Hyphomicrobium, Variovorax and Phenylobacterium might be detrimental to P. notoginseng growth. A total of 85 functional traits were significantly (P < 0.05) correlated with P. notoginseng yields. Functional traits, likely steroid biosynthesis and MAPK signaling pathway were positively correlated with P. notoginseng yields. In contrast, functional traits, such as bacterial secretion system, ABC transporters, metabolism of xenobiotics by cytochrome P450 and drug metabolism–cytochrome P450, were negatively associated with yields.

Conclusions

This study describes an overview of the rhizosphere microbiome of P. notoginseng with discrepant yields and identifies the taxa and functional traits related to yields. Our results provide valuable information to guide the isolation and culture of potentially beneficial microorganisms and to utilize the power of the microbiome to increase plant yields in a continuous cropping system.

Environmental filtering of body size and darker coloration in pollinator communities indicate thermal restrictions on bees, but not flies, at high elevations

BACKGROUND

Bees and flies are the two most dominant pollinator taxa in mountain environments of the Southwest USA. Communities of both taxa change dramatically along elevation gradients. We examined whether bee and fly traits would also change along elevation gradients and if so, do they change in a predictable way related to a decrease in temperature as elevation increases.

METHODS

We used insect body size and darkness traits as proxies for energetic requirements and indicators of cold tolerance in order to assess patterns of bee and fly community trait differences along an elevation gradient. We examined 1,922 individuals of bees and flies sampled along an elevation gradient ranging from 2,400 meters to 3,200 meters and from 9.6 °C to 5.2 °C mean annual temperature. We examined bees and flies separately using community weighted means (site-level trait values weighted by species abundance) and estimates of environmental filtering (quantified as the inverse of the standardized range of trait values).

RESULTS

Bees and flies exhibited two somewhat distinct patterns; (1) Community weighted mean body volume and darkness of bees increased sharply at the highest elevation, and the intensity of environmental filtering also increased with elevation. This was due to both a change among bee populations within a species as well as species replacement at the highest elevation. (2) Community weighted mean body volume and darkness of flies also increased moderately with increasing elevation, but did not exhibit patterns of significant environmental filtering. In fact, the intensity of environmental filtering as indicated by the range of fly body volume weakened with elevation.

CONCLUSION

The increase in filter intensity at high elevations exhibited by bees suggests a significant limitation on the breadth of viable functional strategies for coping with extreme cold, at least within this regional species pool. Flies, on the other hand, do not appear to be limited by high elevations, indicating that the shift from bee to fly dominance at high elevations may be due, at least in part, to greater environmental constraints on bee adaptation to colder environments.

A test of priority effect persistence in semi-natural grasslands through the removal of plant functional groups during community assembly

BACKGROUND

It is known that during plant community assembly, the early colonizing species can affect the establishment, growth or reproductive success of later arriving species, often resulting in unpredictable assembly outcomes. These so called 'priority effects' have recently been hypothesized to work through niche-based processes, with early colonizing species either inhibiting the colonization of other species of the same niche through niche preemption, or affecting the colonization success of species of different niches through niche modification. With most work on priority effects performed in controlled, short-term mesocosm experiments, we have little insight in how niche preemption and niche modification processes interact to shape the community composition of natural vegetations. In this study, we used a functional trait approach to identify potential niche-based priority effects in restored semi-natural grasslands. More specifically, we imposed two treatments that strongly altered the community's functional trait composition; removal of all graminoid species and removal of all legume species, and we compared progressing assembly with unaltered control plots.

RESULTS

Our results showed that niche preemption effects can be, to a limited extent, relieved by species removal. This relief was observed for competitive grasses and herbs, but not for smaller grassland species. Although competition effects acting within functional groups (niche preemption) occurred for graminoids, there were no such effects for legumes. The removal of legumes mainly affected functionally unrelated competitive species, likely through niche modification effects of nitrogen fixation. On the other hand, and contrary to our expectations, species removal was after 4 years almost completely compensated by recolonization of the same species set, suggesting that priority effects persist after species removal, possibly through soil legacy effects.

CONCLUSIONS

Our results show that both niche modification and niche preemption priority effects can act together in shaping community composition in a natural grassland system. Although small changes in species composition occurred, the removal of specific functional groups was almost completely compensated by recolonization of the same species. This suggests that once certain species get established, it might prove difficult to neutralize their effect on assembly outcome, since their imposed priority effects might act long after their removal.

Drivers of the composition and diversity of carabid functional traits in UK coniferous plantations

Functional diversity (FD) is increasingly used as a metric to evaluate the impact of forest management strategies on ecosystem functioning. Management interventions that aim to maximise FD require knowledge of multiple environmental drivers of FD, which have not been studied to date in temperate coniferous production forests. We quantified the relative importance of abiotic (forest management) and biotic (ground vegetation community) drivers of carabid FD and trait distribution in 44 coniferous plantation forest stands across the UK. Carabid FD declined with canopy cover and carabid body length correlated negatively with the percentage of open semi-natural area surrounding a plot. We conclude that forest management could enhance carabid FD through initiatives that emulate natural disturbance regimes through gap creation. We found that neither functional nor taxonomic metrics of vegetation diversity correlated with carabid FD, suggesting that restoration of plant communities, a major goal of forest restoration efforts, will not necessarily enhance carabid FD in coniferous plantations.

Ecological and environmental factors affecting transmission of sylvatic yellow fever in the 2017-2019 outbreak in the Atlantic Forest, Brazil

BACKGROUND

Yellow fever virus (YFV) is an arbovirus that, despite the existence of a safe and effective vaccine, continues to cause outbreaks of varying dimensions in the Americas and Africa. Between 2017 and 2019, Brazil registered un unprecedented sylvatic YFV outbreak whose severity was the result of its spread into zones of the Atlantic Forest with no signals of viral circulation for nearly 80 years.

METHODS

To investigate the influence of climatic, environmental, and ecological factors governing the dispersion and force of infection of YFV in a naïve area such as the landscape mosaic of Rio de Janeiro (RJ), we combined the analyses of a large set of data including entomological sampling performed before and during the 2017-2019 outbreak, with the geolocation of human and nonhuman primates (NHP) and mosquito infections.

RESULTS

A greater abundance of Haemagogus mosquitoes combined with lower richness and diversity of mosquito fauna increased the probability of finding a YFV-infected mosquito. Furthermore, the analysis of functional traits showed that certain functional groups, composed mainly of Aedini mosquitoes which includes Aedes and Haemagogus mosquitoes, are also more representative in areas where infected mosquitoes were found. Human and NHP infections were more common in two types of landscapes: large and continuous forest, capable of harboring many YFV hosts, and patches of small forest fragments, where environmental imbalance can lead to a greater density of the primary vectors and high human exposure. In both, we show that most human infections (~ 62%) occurred within an 11-km radius of the finding of an infected NHP, which is in line with the flight range of the primary vectors.

CONCLUSIONS

Together, our data suggest that entomological data and landscape composition analyses may help to predict areas permissive to yellow fever outbreaks, allowing protective measures to be taken to avoid human cases.

Community structure and function of epiphytic bacteria attached to three submerged macrophytes

In aquatic ecosystems, large amounts of epiphytic bacteria living on the leaf surfaces of submerged macrophytes play important roles in affecting plant growth and biogeochemical cycling. The restoration of different submerged macrophytes has been considered an effective measure to improve eutrophic lakes. However, the community ecology of epiphytic bacteria is far from well understood for different submerged macrophytes. In this study, we used quantitative PCR, 16S rRNA gene high-throughput sequencing and functional prediction analysis to explore the structure and function of epiphytic bacteria in an aquatic ecosystem recovered by three submerged macrophytes (Hydrilla verticillata, Vallisneria natans and Potamogeton maackianus) during two growth periods. The results showed that the community compositions and functions of epiphytic bacterial communities on the submerged macrophyte hosts were different from those of the planktonic bacterial communities in the surrounding water. The alpha diversity of the epiphytic bacterial community was significantly higher in October than in July, and the community compositions and functions differed significantly in July and October. Among the three submerged macrophytes, the structures and functions of the epiphytic bacterial community exhibited obvious differences, and some specific taxa were enriched on the biofilms of the three plants. The alpha diversity and the abundance of functions related to nitrogen and phosphorus transformation were higher in the epiphytic bacteria of P. maackianus. In summary, these results provide clues for understanding the distribution and formation mechanisms of epiphytic bacteria on submerged macrophyte leaves and their roles in freshwater ecosystems.

Functional characterization of the Hyles euphorbiae hawkmoth transcriptome reveals strong expression of phorbol ester detoxification and seasonal cold hardiness genes

Background

The European spurge hawkmoth, Hyles euphorbiae (Lepidoptera, Sphingidae), has been intensively studied as a model organism for insect chemical ecology, cold hardiness and evolution of species delineation. To understand species isolation mechanisms at a molecular level, this study aims at determining genetic factors underlying two adaptive ecological trait candidates, phorbol ester (TPA) detoxification and seasonal cold acclimation.

Method

A draft transcriptome of H. euphorbiae was generated using Illumina sequencing, providing the first genomic resource for the hawkmoth subfamily Macroglossinae. RNA expression levels in tissues of experimental TPA feeding larvae and cooled pupae was compared to levels in control larvae and pupae using 26 bp RNA sequence tag libraries (DeepSuperSAGE). Differential gene expression was assessed by homology searches of the tags in the transcriptome.

Results

In total, 389 and 605 differentially expressed transcripts for detoxification and cold hardiness, respectively, could be identified and annotated with proteins. The majority (22 of 28) of differentially expressed detox transcripts of the four 'drug metabolism' enzyme groups (cytochrome P450 (CYP), carboxylesterases (CES), glutathione S-transferases (GST) and lipases) are up-regulated. Triacylglycerol lipase was significantly over proportionally annotated among up-regulated detox transcripts. We record several up-regulated lipases, GSTe2, two CESs, CYP9A21, CYP6BD6 and CYP9A17 as candidate genes for further H. euphorbiae TPA detoxification analyses. Differential gene expression of the cold acclimation treatment is marked by metabolic depression with enriched Gene Ontology terms among down-regulated transcripts almost exclusively comprising metabolism, aerobic respiration and dissimilative functions. Down-regulated transcripts include energy expensive respiratory proteins like NADH dehydrogenase, cytochrome oxidase and ATP synthase. Gene expression patterns show shifts in carbohydrate metabolism towards cryoprotectant production. The Glycolysis enzymes, G1Pase, A1e, Gpi and an Akr isoform are up-regulated. Glycerol, an osmolyte which lowers the body liquid supercooling point, appears to be the predominant polyol cryoprotectant in H. euphorbiae diapause pupae. Several protein candidates involved in glucose, glycerol, myo-inositol and potentially sorbitol and trehalose synthesis were identified.

Conclusions

A majority of differently expressed transcripts unique for either detoxification or cold hardiness indicates highly specialized functional adaptation which may have evolved from general cell metabolism and stress response.The transcriptome and extracted candidate biomarkers provide a basis for further gene expression studies of physiological processes and adaptive traits in H. euphorbiae.

Land use influences macroinvertebrate community composition in boreal headwaters through altered stream conditions

Land use is known to alter the nature of land-water interactions, but the potential effects of widespread forest management on headwaters in boreal regions remain poorly understood. We evaluated the importance of catchment land use, land cover, and local stream variables for macroinvertebrate community and functional trait diversity in 18 boreal headwater streams. Variation in macroinvertebrate metrics was often best explained by in-stream variables, primarily water chemistry (e.g. pH). However, variation in stream variables was, in turn, significantly associated with catchment-scale forestry land use. More specifically, streams running through catchments that were dominated by young (11-50 years) forests had higher pH, greater organic matter standing stock, higher abundance of aquatic moss, and the highest macroinvertebrate diversity, compared to streams running through recently clear-cut and old forests. This indicates that catchment-scale forest management can modify in-stream habitat conditions with effects on stream macroinvertebrate communities and that characteristics of younger forests may promote conditions that benefit headwater biodiversity.

The influence of different deep-sea coral habitats on sediment macrofaunal community structure and function

Deep-sea corals can create a highly complex, three-dimensional structure that facilitates sediment accumulation and influences adjacent sediment environments through altered hydrodynamic regimes. Infaunal communities adjacent to different coral types, including reef-building scleractinian corals and individual colonies of octocorals, are known to exhibit higher macrofaunal densities and distinct community structure when compared to non-coral soft-sediment communities. However, the coral types have different morphologies, which may modify the adjacent sediment communities in discrete ways. Here we address: (1) how infaunal communities and their associated sediment geochemistry compare among deep-sea coral types (Lophelia pertusa, Madrepora oculata, and octocorals) and (2) do infaunal communities adjacent to coral habitats exhibit typical regional and depth-related patterns observed in the Gulf of Mexico (GOM). Sediment push cores were collected to assess diversity, composition, numerical abundance, and functional traits of macrofauna (>300 µm) across 450 kilometers in the GOM at depths ranging from 263–1,095 m. Macrofaunal density was highest in L. pertusa habitats, but similar between M. oculata and octocorals habitats. Density overall exhibited a unimodal relationship with depth, with maximum densities between 600 and 800 m. Diversity and evenness were highest in octocoral habitats; however, there was no relationship between diversity and depth. Infaunal assemblages and functional traits differed among coral habitats, with L. pertusa habitats the most distinct from both M. oculata and octocorals. These patterns could relate to differences in sediment geochemistry as L. pertusa habitats contained high organic carbon content but low proportions of mud compared to both M. oculata and octocoral habitats. Distance-based linear modeling revealed depth, mud content, and organic carbon as the primary factors in driving coral infaunal community structure, while geographic location (longitude) was the primary factor in functional trait composition, highlighting both the location and ecological differences of L. pertusa habitats from other coral habitats. Enhanced habitat structural complexity associated with L. pertusa and differences in localized hydrodynamic flow may contribute to the dissimilarities in the communities found among the coral types. Our results suggest a decoupling for infaunal coral communities from the typical depth-related density and diversity patterns present throughout soft-sediment habitats in the GOM, highlighting the importance of deep-sea corals in structuring unique communities in the nearby benthos.

Environmental gradients influence differences in leaf functional traits between native and non-native plants

Determining the characteristics of non-native plants that can successfully establish and spread is central to pressing questions in invasion ecology. Evidence suggests that some non-native species establish and spread in new environments because they possess characteristics (functional traits) that allow them to either successfully compete with native residents or fill previously unfilled niches. However, the relative importance of out-competing native species vs. filling empty niche space as potential mechanisms of invasion may depend on environmental characteristics. Here, we measured plant functional traits, proxies indicative of competitive and establishment strategies, to determine if these traits vary among native and invasive species and if their prevalence is dependent on environmental conditions. Using a natural environmental gradient in Hawai'i Volcanoes National Park, we evaluated how functional traits differ between native and non-native plant communities and if these differences change along an environmental gradient from hot, dry to cool, wet conditions. Functional trait differences suggested that both competition and open niche space may be important for invasion. Non-native communities tended to have traits associated with faster growth strategies such as higher specific leaf area and lower leaf thickness. However, native and non-native community traits became more dissimilar along the gradient, suggesting that non-native species may be occupying previously unfilled niche space at the hot, dry end of the gradient. We also found that most of the variation in functional trait values amongst plots was due to species turnover rather than intraspecific variation. These results highlight the role of environmental context when considering invasion mechanisms.

Functional and phylogenetic diversity of cultivable rhizobacterial endophytes of sorghum [Sorghum bicolor (L.) Moench]

A diverse group of bacteria colonize the exo- and endo-rhizospheres of sorghum and play a critical role in its tolerance to drought and other abiotic stresses. Two hundred and eighty endophytic bacteria were isolated from the surface-sterilized roots of four sorghum cultivars that were grown on three soil types at three different phenological stages of growth. The isolates were subjected to in vitro screening for their plant growth promoting traits. Out of 280 isolates, 70 could produce Indole 3-Acetic Acid (IAA), 28 showed N-fixation, 28 could solubilize phosphate, 24 had ACC deaminase activity and 13 isolates were able to produce siderophores. Functional diversity grouping of the isolates indicated one isolate having five PGP traits and two isolates having four PGP traits; two and 29 isolates having three and two PGP traits, respectively. Among the thirty-four isolates that possessed multiple PGP traits, 19 and 17 isolates were able to produce significant quantities of IAA in the presence and absence of L-tryptophan, an inducer. Eight isolates possessed high levels of ACC deaminase activity. PCR-RFLP of the 16Sr RNA gene revealed a distinct clustering and considerable genetic diversity among these functionally characterized isolates. The 16S rRNA gene based identification of the isolates of single and multiple PGP traits revealed phylogenetic dominance of Firmicutes; Acinetobacter, Bacillus, Enterobacter, Geobacillus, Lysinibacillus, Microbacterium, Ochrobactrum, Paenibacillus and Pseudomonas were the major genera present in the endo-rhizosphere of sorghum. Results of this study are constructive in selection of effective rhizobacterial endophytes or consortia for drought stress alleviation in sorghum.

Selective logging: does the imprint remain on tree structure and composition after 45 years?

Selective logging of tropical forests is increasing in extent and intensity. The duration over which impacts of selective logging persist, however, remains an unresolved question, particularly for African forests. Here, we investigate the extent to which a past selective logging event continues to leave its imprint on different components of an East African forest 45 years later. We inventoried 2358 stems ≥10 cm in diameter in 26 plots (200 m × 10 m) within a 5.2 ha area in Kibale National Park, Uganda, in logged and unlogged forest. In these surveys, we characterized the forest light environment, taxonomic composition, functional trait composition using three traits (wood density, maximum height and maximum diameter) and forest structure based on three measures (stem density, total basal area and total above-ground biomass). In comparison to unlogged forests, selectively logged forest plots in Kibale National Park on average had higher light levels, different structure characterized by lower stem density, lower total basal area and lower above-ground biomass, and a distinct taxonomic composition driven primarily by changes in the relative abundance of species. Conversely, selectively logged forest plots were like unlogged plots in functional composition, having similar community-weighted mean values for wood density, maximum height and maximum diameter. This similarity in functional composition irrespective of logging history may be due to functional recovery of logged forest or background changes in functional attributes of unlogged forest. Despite the passage of 45 years, the legacy of selective logging on the tree community in Kibale National Park is still evident, as indicated by distinct taxonomic and structural composition and reduced carbon storage in logged forest compared with unlogged forest. The effects of selective logging are exerted via influences on tree demography rather than functional trait composition.

Competitive interactions between a nonmycorrhizal invasive plant, Alliaria petiolata, and a suite of mycorrhizal grassland, old field, and forest species

The widespread invasion of the nonmycorrhizal biennial plant, Alliaria petiolata in North America is hypothesized to be facilitated by the production of novel biochemical weapons that suppress the growth of mycorrhizal fungi. As a result, A. petiolata is expected to be a strong competitor against plant species that rely on mycorrhizal fungi for nutrient uptake services. If A. petiolata is also a strong competitor for soil resources, it should deplete nutrients to levels lower than can be tolerated by weaker competitors. Because the negative effect of losing the fungal symbiont for mycorrhizal plants is greatest when nutrients are low, the ability of A. petiolata to simultaneously suppress fungi and efficiently take up soil nutrients should further strengthen its competitive ability against mycorrhizal plants. To test this hypothesis, we grew 27 mycorrhizal tree, forb and grass species that are representative of invaded habitats in the absence or presence of competition with A. petiolata in soils that had previously been experimentally planted with the invader or left as a control. A history of A. petiolata in soil reduced plant available forms of nitrogen by >50% and phosphorus by 17% relative to control soil. Average mycorrhizal colonization of competitor species was reduced by >50% in A. petiolata history versus control soil. Contrary to expectations, competition between A. petiolata and other species was stronger in control than history soil. The invader suppressed the biomass of 70% of competitor species in control soil but only 26% of species in history soil. In addition, A. petiolata biomass was reduced by 56% in history versus control soil, whereas the average biomass of competitor species was reduced by 15%. Thus, our results suggest that the negative effect of nutrient depletion on A. petiolata was stronger than the negative effect of suppressing mycorrhizal colonization on competitor species. These findings indicate that the inhibitory potential of A. petiolata on competitor species via mycorrhizal suppression is not enhanced under nutrient limitation.

Plant traits in influencing soil moisture in semiarid grasslands of the Loess Plateau, China

Large-scale vegetation restoration projects pose threats to water resource security in water-limited regions. Thus, the quantification of how vegetation cover affects soil moisture is of key importance to support effective restoration schemes in drylands. However, the current understanding of such effects remains poor. For this study, an in-situ vegetation-removal experiment was conducted at 36 herbaceous grassland sites having different community compositions and topographical conditions in two adjacent loess watersheds of the Loess Plateau, China. The effects of vegetation cover (vegetation effects) on soil moisture were analyzed across soil profiles (0-180 cm) and two growing seasons. Overall, 13 plant traits and 7 topographic and soil properties were employed to evaluate how community compositions modulated vegetation effects on soil moisture. The results showed that vegetation cover increased soil moisture in the surface layer (0-20 cm) by 6.81% during wet periods (semi-monthly rainfall >30 mm) relative to an in-situ unvegetated control, but primarily induced a decline of soil moisture in the deep soil layer (20-180 cm) by 19.44% across two growing seasons. Redundancy analysis (RDA) and structural equation modeling (SEM) suggested that these vegetation effects on soil moisture were significantly correlated with vegetative height, leaf area, shallow root allocation, and slope gradient. Our study revealed that tall, small-leaved, and shallow-rooted plants on flat topographies were beneficial to soil water retention and replenishment. This implied that current restoration strategies may be significantly improved through the development of optimal communities and diverse terracing measures. Our findings are anticipated to provide effective guidance for soil water conservation, as well as ecosystem rehabilitation in dry and degraded regions.

Species' traits do not converge on optimum values in preferred habitats

Plant trait expression is shaped by filters, which can alter trait means and variances, theoretically driving species toward an "optimum" trait value for a set of environmental conditions. Recent research has highlighted the ubiquity of intraspecific variation in functional traits, which can cause plants to diverge from a hypothesized "optimum". We examined whether species occurring in "core" habitats (where they occur frequently, abundantly, and consistently) express traits that are nearer to "optimum", as captured by the community-weighted mean (CWM). We also asked whether trait variance showed signs of environmental filtering. We used cluster analysis to group plots based on environmental factors along a wet-to-dry ecotone. We used indicator species analysis to identify species with strong associations within each cluster. Trait means and variances were compared, and evidence of variance filtering was tested using a null-model approach. Trait means and trait variances respond to local-scale environmental filtering and species in core habitats were not necessarily nearer to the CWM than in other habitats. Intraspecific trait variability shows a strong signal of filtering, as variability was reduced for nearly all species and all traits compared to estimates of variability generated in the absence of environmental filtering. Our results provide strong evidence that species traits are not necessarily near "optimum" trait values in core habitats, and that trait distributions within species are strongly shaped by the environment. Future analyses should account for this divergence when calculating metrics of functional diversity, and extrapolating to ecosystem function.

Low levels of intraspecific trait variation in a keystone invertebrate group

The trait-based approach to ecology promises to provide a mechanistic understanding of species distributions and ecosystem functioning. Typically, trait analyses focus on average species trait values and assume that intraspecific variation is small or negligible. Recent work has shown, however, that intraspecific trait variation can often contribute substantially to total trait variation. Whilst many studies have investigated intraspecific variation in plants, very few have done so for invertebrates. There is no research on the level of intraspecific trait variation in ants (Hymenoptera: Formicidae), despite the fact that there is a growing body of literature using ant morphological trait data and demonstrating that these insects play important roles in many ecosystems and food webs. Here, we investigate the intraspecific variability of four commonly used ant morphological traits from 23 species from the Maloti-Drakensberg Mountains of southern Africa. In total, we measured 1145 different individuals and made 6870 trait measurements. Intraspecific variation accounted for only 1–4% of total trait variation for each of the four traits we analysed. We found no links between intraspecific variation, phylogeny and elevation. On average, six individuals generated robust species means but under biased sampling scenarios 20 individuals were needed. The low levels of intraspecific morphological variation that we find suggest that the approach of using mean species traits is valid, in this fauna at least. Regardless, we encourage ant trait ecologists to measure greater numbers of individuals, especially across gradients, to shed further light on intraspecific variation in this functionally important group of insects.

Salinity reduces site quality and mangrove forest functions. From monitoring to understanding

Mangroves continue to be threatened across their range by a mix of anthropogenic and climate change-related stress. Climate change-induced salinity is likely to alter the structure and functions of highly productive mangrove systems. However, we still lack a comprehensive understanding of how rising salinity affects forest structure and functions because of the limited availability of mangrove field data. Therefore, based on extensive spatiotemporal mangrove data covering a large-scale salinity gradient, collected from the world's largest single tract mangrove ecosystem - the Bangladesh Sundarbans, we, aimed to examine (QI) how rising salinity influences forest structure (e.g., stand density, diversity, leaf area index (LAI), etc.), functions (e.g., carbon stocks, forest growth), nutrients availability, and functional traits (e.g., specific leaf area, wood density). We also wanted to know (QII) how forest functions interact (direct vs. indirect) with biotic (i.e., stand structure, species richness, etc.) and abiotic factors (salinity, nutrients, light availability, etc.). We also asked (QIII) whether the functional variable decreases disproportionately with salinity and applied the power-law (i.e., Y = a X^b) to the salinity and functional variable relationships. In this study, we found that rises in salinity significantly impede forest growth and produce less productive ecosystems dominated by dwarf species while reducing stand structural properties (i.e., tree height, basal area, dominant tree height, LAI), soil carbon (organic and root carbon), and macronutrient availability in the soil (e.g., NH4+, P, and K). Besides, species-specific leaf area (related to resource acquisition) also decreased with salinity, whereas wood density (related to resource conservation) increased. We observed a declining abundance of the salt-intolerant climax species (Heritiera fomes) and dominance of the salt-tolerant species (Excoecaria agallocha, Ceriops decandra) in the high saline areas. In the case of biotic and abiotic factors, salinity and salinity-driven gap fraction (high transmission of light) had a strong negative impact on functional variables, while nutrients and LAI had a positive impact. In addition, the power-law explained the consistent decline of functional variables with salinity. Our study disentangles the negative effects of salinity on site quality in the Sundarbans mangrove ecosystem, and we recognize that nutrient availability and LAI are likely to buffer the less salt-tolerant species to maintain the ability to sequester carbon with sea-level rise. These novel findings advance our understanding of how a single stressor-salinity-can shape mangrove structure, functions, and productivity and offer decision makers a much-needed scientific basis for developing pragmatic ecosystem management and conservation plans in highly stressed coastal ecosystems across the globe.

Snow is an important control of plant community functional composition in oroarctic tundra

The functional composition of plant communities is a critical modulator of climate change impacts on ecosystems, but it is not a simple function of regional climate. In the Arctic tundra, where climate change is proceeding the most rapidly, communities have not shifted their trait composition as predicted by spatial temperature-trait relationships. Important causal pathways are thus missing from models of trait composition change. Here, we study causes of plant community functional variation in an oroarctic tundra landscape in Kilpisjärvi, Finland. We consider the community-weighted means of plant vegetative height, as well as two traits related to the leaf economic spectrum. Specifically, we model their responses to locally measured summer air temperature, snow conditions, and soil resource levels. For each of the traits, we also quantify the importance of intraspecific trait variation (ITV) for between-community functional differences and trait-environment matching. Our study shows that in a tundra landscape (1) snow is the most influential abiotic variable affecting functional composition, (2) vegetation height is under weak local environmental control, whereas leaf economics is under strong local environmental control, (3) the relative magnitude of ITV differs between traits, and (4) ITV is not very consequential for community-level trait-environment relationships. Our analyses highlight the importance of winter conditions for community functional composition in seasonal areas. We show that winter climate change can either amplify or counter the effects summer warming, depending on the trait.