Comparative anatomy, homologies and evolution of the pectoral and forelimb musculature of tetrapods with special attention to extant limbed amphibians and reptiles

The main aim of the present work is to synthesize the information obtained from our dissections of the pectoral and forelimb muscles of representative members of the major extant taxa of limbed amphibians and reptiles and from our review of the literature, in order to provide an account of the comparative anatomy, homologies and evolution of these muscles in the Tetrapoda. The pectoral and forelimb musculature of all these major taxa conform to a general pattern that seems to have been acquired very early in the evolutionary history of tetrapods. Although some muscles are missing in certain taxa, and a clear departure from this general pattern is obviously present in derived groups such as birds, the same overall configuration is easily distinguishable in these taxa. Among the most notable anatomical differences between the groups, one that seems to have relevant evolutionary and functional implications, concerns the distal insertion points of the forearm musculature. In tetrapods, the muscles of the radial and ulnar complexes of the forearm are pleisomorphically mainly inserted onto the radius/ulna or onto the more proximal carpal bones, but in mammals some of these muscles insert more distally onto bones such as the metacarpals. Interestingly, a similar trend towards a more distal insertion of these muscles is also found in some non-mammalian tetrapod taxa, such as some anurans (e.g. Phyllomedusa). This may be correlated with the acquisition of more subtle digital movement abilities in these latter taxa.

An evaluation of the performance of three semantic background knowledge sources in comparative anatomy

In this paper we evaluate the performance and usefulness of three semantic background knowledge sources for predicting synonymous anatomical terms across species boundaries. The reference sources under evaluation are UMLS, FMA-OBO and WordNet, which are applied to the anatomical ontologies of mouse and zebrafish. Our results show that the use of specialized knowledge sources leads to highly accurate predictions, verified through complete manual curation, which can be further improved by combining multiple of said sources. We argue that these three references complement each other in terms of granularity and specificity. From our results we conclude that these references can be used to create reliable ontology mappings with minimal human supervision.

Maps and streams in the auditory cortex: nonhuman primates illuminate human speech processing

Speech and language are considered uniquely human abilities: animals have communication systems, but they do not match human linguistic skills in terms of recursive structure and combinatorial power. Yet, in evolution, spoken language must have emerged from neural mechanisms at least partially available in animals. In this paper, we will demonstrate how our understanding of speech perception, one important facet of language, has profited from findings and theory in nonhuman primate studies. Chief among these are physiological and anatomical studies showing that primate auditory cortex, across species, shows patterns of hierarchical structure, topographic mapping and streams of functional processing. We will identify roles for different cortical areas in the perceptual processing of speech and review functional imaging work in humans that bears on our understanding of how the brain decodes and monitors speech. A new model connects structures in the temporal, frontal and parietal lobes linking speech perception and production.

[Observation and analysis on the meridian-collateral running track-related anatomical structure in the human body]

In the present paper the authors analyze the anatomical structure of the meridian running track by using the dialectical thought and comprehensive analysis of the integrated Chinese and western medicine. It has been observed that the "Qi-passages" of the 14 meridians of Chinese medicine are located in the connective tissue among the interspace of the muscles, etc. distributing longitudinally. The "Qi-passages" of the 15 Luomai (collaterals of the meridians) are located in the connective tissue among the interspace of the muscles, etc. distributing transversally, while those of the small branches of the meridian collaterals are located in the interspace mesenchyme of the muscle bundles distributing in the whole body. The "Qi-passages" of the tiny branches of the meridian collaterals are located in the mesenchyme of the intracellular space, such as the muscle fibers in the whole body. The authors hold that the so-called "Mai Qi" of the meridian-collaterals is the liquid-Qi flowing in the vertical and horizontal tissue interspaces. The "Qi-passage" of the meridian-collaterals of Chinese medicine is the pathway of the liquid-Qi of the tissue interspaces. The structure of the meridian-collaterals is the tissue interspace. The meridian-collateral system is a regulation-control system in the human body where the Qi-passages communicate with each other, and is, in fact, the protoplasm, the liquid-Qi circulating in the tissue interspaces.

Three-dimensional reconstruction of the amphid sensilla in the microbial feeding nematode, Acrobeles complexus (Nematoda: Rhabditida)

Amphid sensilla are the primary olfactory, chemoreceptive, and thermoreceptive organs in nematodes. Their function is well described for the model organism Caenorhabditis elegans, but it is not clear to what extent we can generalize these findings to distantly related nematodes of medical, economic, and agricultural importance. Current detailed descriptions of anatomy and sensory function are limited to nematodes that recent molecular phylogenies would place in the same taxonomic family, the Rhabditidae. Using serial thin-section transmission electron microscopy, we reconstructed the anatomy of the amphid sensilla in the more distantly related nematode, Acrobeles complexus (Cephalobidae). Amphid structure is broadly conserved in number and arrangement of cells. Details of cell anatomy differ, particularly for the sensory neurite termini. We identify an additional sensory neuron not found in the amphid of C. elegans and propose homology with the C. elegans interneuron AUA. Hypotheses of homology for the remaining sensory neurons are also proposed based on comparisons between C. elegans, Strongyloides stercoralis, and Haemonchus contortus.

Conservation and diversity of Foxp2 expression in muroid rodents: functional implications

FOXP2, the first gene causally linked to a human language disorder, is implicated in song acquisition, production, and perception in oscine songbirds, the evolution of speech and language in hominids, and the evolution of echolocation in bats. Despite the evident relevance of Foxp2 to vertebrate acoustic communication, a comprehensive description of neural expression patterns is currently lacking in mammals. Here we use immunocytochemistry to systematically describe the neural distribution of Foxp2 protein in four species of muroid rodents: Scotinomys teguina and S. xerampelinus ("singing mice"), the deer mouse, Peromyscus maniculatus, and the lab mouse, Mus musculus. While expression patterns were generally highly conserved across brain regions, we identified subtle but consistent interspecific differences in Foxp2 distribution, most notably in the medial amygdala and nucleus accumbens, and in layer V cortex throughout the brain. Throughout the brain, Foxp2 was highly enriched in areas involved in modulation of fine motor output (striatum, mesolimbic dopamine circuit, olivocerebellar system) and in multimodal sensory processing and sensorimotor integration (thalamus, cortex). We propose a generalized model for Foxp2-modulated pathways in the adult brain including, but not limited to, fine motor production and auditory perception.

[Anatomical visibility of the meridian information channels]

The "structure imperfectness of signal channel rule" put forward by the author of the present paper may provide a theoretical evidence for the systematicness of meridian information channel. The conclusion that no special structure of the meridian-collateral system has been found is likely to serve as a piece of counterevidence. According to the latest structural view, the development of capillaries, lymphatic vessels and nerves needs target cells-released inducible factors. In the initial phase of the development of the organism, the asymmetry of the interspaces among cells results in the production and arrangement imbalance of the sequential factors which make the capillaries, lymphatic vessels and nerves distribute sequentially in time and space. Meridian-collateral, following the "systemic statistic distribution rule", is a general expression of this distribution pattern. As a systematic structure, the meridian-collateral system distributes in an optimized way in the human body and has both orderly and compatible characteristics. The author thinks that the meridian-collateral information channel is anatomically visible in the time and spatial structure, and in its logical structure and compatibility during the process of growth. Hence, many techniques of delicate anatomy, quantitative anatomy, growth anatomy, comparative anatomy, tridimensional remodeling of living creature and dynamical remodeling of growth all should be used as the important tools for studying the meridian information channel. The theory and the anatomical techniques determine what you would finally find.

Anatomical organization of the auditory cortex

The identification of areas that contribute to auditory processing in the human cerebral cortex has been the subject of sporadic investigation for more than one century. Several anatomical schemas have been advanced, but a standard model has not been adopted by researchers in the field. Most often, the results of functional imaging or electrophysiological studies involving auditory cortex are related to the cytoarchitectonic map of Brodmann (1909). Though useful as a guide and point of reference, this map has never been validated and appears to be incomplete. In recent years, renewed interest in the organization of auditory cortex has fostered numerous comparative studies in humans, nonhuman primates, and other mammalian species. From these efforts, common features of structural and functional organization have begun to emerge from which a working model of human auditory cortex can be derived. The results of those studies and the rudiments of the model are reviewed in this manuscript.

Evolutionary changes in the complexity of the tectum of nontetrapods: a cladistic approach

BACKGROUND

The tectum is a structure localized in the roof of the midbrain in vertebrates, and is taken to be highly conserved in evolution. The present article assessed three hypotheses concerning the evolution of lamination and citoarchitecture of the tectum of nontetrapod animals: 1) There is a significant degree of phylogenetic inertia in both traits studied (number of cellular layers and number of cell classes in tectum); 2) Both traits are positively correlated accross evolution after correction for phylogeny; and 3) Different developmental pathways should generate different patterns of lamination and cytoarchitecture.

METHODOLOGY/PRINCIPAL FINDINGS

The hypotheses were tested using analytical-computational tools for phylogenetic hypothesis testing. Both traits presented a considerably large phylogenetic signal and were positively associated. However, no difference was found between two clades classified as per the general developmental pathways of their brains.

CONCLUSIONS/SIGNIFICANCE

The evidence amassed points to more variation in the tectum than would be expected by phylogeny in three species from the taxa analysed; this variation is not better explained by differences in the main course of development, as would be predicted by the developmental clade hypothesis. Those findings shed new light on the evolution of an functionally important structure in nontetrapods, the most basal radiations of vertebrates.

From fish to modern humans--comparative anatomy, homologies and evolution of the head and neck musculature

In a recent paper Diogo (2008) reported the results of the first part of an investigation of the comparative anatomy, homologies and evolution of the head and neck muscles of osteichthyans (bony fish + tetrapods). That report mainly focused on actinopterygian fish, but also compared these fish with certain non-mammalian sarcopterygians. The present paper focuses mainly on sarcopterygians, and particularly on how the head and neck muscles have evolved during the transitions from sarcopterygian fish and non-mammalian tetrapods to monotreme and therian mammals, including modern humans. The data obtained from our dissections of the head and neck muscles of representative members of sarcopterygian fish, amphibians, reptiles, monotremes and therian mammals, such as rodents, tree-shrews, colugos and primates, including modern humans, are compared with the information available in the literature. Our observations and comparisons indicate that the number of mandibular and true branchial muscles (sensu this work) present in modern humans is smaller than that found in mammals such as tree-shrews, rats and monotremes, as well as in reptiles such as lizards. Regarding the pharyngeal musculature, there is an increase in the number of muscles at the time of the evolutionary transition leading to therian mammals, but there was no significant increase during the transition leading to the emergence of higher primates and modern humans. The number of hypobranchial muscles is relatively constant within the therian mammals we examined, although in this case modern humans have more muscles than other mammals. The number of laryngeal and facial muscles in modern humans is greater than that found in most other therian taxa. Interestingly, modern humans possess peculiar laryngeal and facial muscles that are not present in the majority of the other mammalian taxa; this seems to corroborate the crucial role played by vocal communication and by facial expressions in primate and especially in human evolution. It is hoped that by compiling, in one paper, data about the head and neck muscles of a wide range of sarcopterygians, the present work could be useful to comparative anatomists, evolutionary biologists and functional morphologists and to researchers working in other fields such as developmental biology, genetics and/or evolutionary developmental biology.

[Technological approach to insect anatomy and evolution]

Principal disadvantage of most of the recent approaches to reconstructions of the insect evolution is due to comparison of the species by formal character sets with unknown functional relations. This leads to ignorance of the systemic nature of differences caused by integrity of the living beings. Under consideration is an alternative approach to description of the insect body construction based on A.M. Ugolev's concept of natural technologies. According to it, a morphological structure is a device designed for fulfilment of certain tasks. Therefore, a structure's characteristics have to fulfill the tasks' conditions. This approach is considered as applied to the systems of muscles and sclerits providing for vitally significant functions such as feeding, locomotion, communication, protection etc. Any such skeletal-muscle system is arranged hierarchically. A muscle together with its supporting sclerits is considered as a skeletal-muscle complex (SMC) capable for a mechanic action. Such SMCs, after respective muscle activations, are integrated into blocks responsible for the elementary tasks of the lower level of the motoric process. Each block can be formed by both a particular active SMC and by a group of biomechanical elements. Each block is considered mono-functional, unlike multifunctional SMCs, as it accomplishes a particular elementary task, namely displacement of a particular sclerit. Various compositions of blocks form subsystems corresponding to the higher level tasks. An aggregation of SMCs constituting the blocks accomplishing elementary actions is defined as the technological system designed for the motoric process. Organismic SMCs being compositionally constant, control over their activity serves as a mechanism of combining biomechanical elements. This mechanism is responsible for creation of a wide spectrum of motoric systems. SMCs' composition is changed in the course of evolution which is reflected into motoric parameters. Thus, certain characteristics of the SMCs and their compositions are correlated with certain functional parameters. Therefore, both the subsystems and the entire motoric system as the functioning devices can be characterized in two respects, by their composition and by functional parameters of respective type and rank. The above consideration serves as a basis for the block-scheme of description of the insect motoric systems similar to the relational data base design. Three types of objects are to be incorporated in such a block-scheme. One type includes functional items ranging from elementary actions to motoric processes and their effects. Another type includes morphological items ranging from SMCs to the body parts and to the body as a whole. The third type includes technological items which are blocks, subsystems and systems. All three types reflect different aspects of description of the entire subject domain defined as the technology of the vitally significant effects. Descriptions of the objects of the same type and rank are standardized by the same characteristics and are arranged in the standard tables. Relations between the table descriptions reflect hierarchical interrelations of the objects of the same type, as well as interrelations defined by the role of morphological objects in the fulfilment of particular motoric tasks. Such an approach to the description design makes it possible to define the spectrum of effects dependent on the general structural parameters. Its application to comparative analysis of the abdomen in the ants and other Aculeata allowed to recognized three motoric systems which interactions define metasomal constructive diversity in Formicidae. These include the stigmal valves system and two segmentary movements systems, compressions and bendings. Principal type of the ant metasoma are recognized which are compressional, tubulational-compressional, and tubulational. These types are closely correlated with such biological functions as liquid food transportation behaviour, protective behaviour, types of food storage, types of within-nest temperature regulation. Increase of the intersegmental joints in the metasoma is shown to be correlated with the actions requesting both flexibility and rigidity of its segments (balancing, inoculation, movements in the soil). But simultaneously, reduction of the abdomen capability to compression and stretching leads to reduction of breathing actions needed for the metabolism intensification. It served as a fundamental precondition for the formicid ancestors to shift from the flight to less energy consuming walking locomotion that lead eventually to the existing metasome diversity. The principles of systemic analysis contained in the above technological approach eliminate the gap between investigations in morphology, physiology and ecology of insects. The description procedure does not substitute for the morpho-functional analysis but allows structuring diverse information and providing for adequacy of comparisons of organisms. The approach is supposed to be applicable to the systems of any levels of complexity up to the supra-organismal ones. It makes such an approach promising in explorations of evolution of coadaptions, of social systems and of ecological systems.

Did pterosaurs feed by skimming? Physical modelling and anatomical evaluation of an unusual feeding method

Similarities between the anatomies of living organisms are often used to draw conclusions regarding the ecology and behaviour of extinct animals. Several pterosaur taxa are postulated to have been skim-feeders based largely on supposed convergences of their jaw anatomy with that of the modern skimming bird, Rynchops spp. Using physical and mathematical models of Rynchops bills and pterosaur jaws, we show that skimming is considerably more energetically costly than previously thought for Rynchops and that pterosaurs weighing more than one kilogram would not have been able to skim at all. Furthermore, anatomical comparisons between the highly specialised skull of Rynchops and those of postulated skimming pterosaurs suggest that even smaller forms were poorly adapted for skim-feeding. Our results refute the hypothesis that some pterosaurs commonly used skimming as a foraging method and illustrate the pitfalls involved in extrapolating from limited morphological convergence.

Just because a component of an extinct animal resembles that of a living one does not necessarily imply that both were used for the same task. The lifestyles of pterosaurs, long-extinct flying reptiles that soared ancient skies above the dinosaurs, have long been the subject of debate among palaeontologists. Similarities between the skulls of living birds (black skimmers) that feed by skimming the water surface with their lower bill to catch small fish, and those of some pterosaurs have been used to argue that these ancient reptiles also fed in this way. We have addressed this question by measuring the drag experienced by model bird bills and pterosaur jaws and estimating how the energetic cost of feeding in this way would affect their ability to fly. Interestingly, we found that the costs of flight while feeding are considerably higher for black skimmers than previously thought, and that feeding in this way would be excessively costly for the majority of pterosaurs. We also examined pterosaur skulls for specialised skimming adaptations like those seen in modern skimmers, but found that pterosaurs have few suitable adaptations for this lifestyle. Our results counter the idea that some pterosaurs commonly used skimming as a foraging method and illustrate the pitfalls involved in extrapolating from living to extinct forms using only their morphology.

Physical and mathematical models of fossil pterosaurs and a living bird that feeds by skimming refute the hypothesis that pterosaurs would have been able to forage this way.

Natural history of Homo erectus

Our view of H. erectus is vastly different today than when Pithecanthropus erectus was described in 1894. Since its synonimization into Homo, views of the species and its distribution have varied from a single, widely dispersed, polytypic species ultimately ancestral to all later Homo, to a derived, regional isolate ultimately marginal to later hominin evolution. A revised chronostratigraphic framework and recent work bearing either directly or indirectly on reconstructions of life-history patterns are reviewed here and, together with a review of the cranial and postcranial anatomy of H. erectus, are used to generate a natural history of the species. Here I argue that H. erectus is a hominin, notable for its increased body size, that originates in the latest Pliocene/earliest Pleistocene of Africa and quickly disperses into Western and Eastern Asia. It is also an increasingly derived hominin with several regional morphs sustained by intermittent isolation, particularly in Southeast Asia. This view differs from several current views, most especially that which recognizes only a single hominin species in the Pleistocene, H. sapiens, and those which would atomize H. erectus into a multiplicity of taxa. Following Jolly ([2001] Yrbk Phys Anthropol 44:177-204), the regional morphs of H. erectus may be productively viewed as geographically replacing allotaxa, rather than as the focus of unresolvable species debates. Such a view allows us to focus on the adaptations and biology of local groups, including questions of biogeographic isolation and local adaptation. A number of issues remain unresolved, including the significance of diversity in size and shape in the early African and Georgian records.

Origins of radial symmetry identified in an echinoderm during adult development and the inferred axes of ancestral bilateral symmetry

How the radial body plan of echinoderms is related to the bilateral body plan of their deuterostome relatives, the hemichordates and the chordates, has been a long-standing problem. Now, using direct development in a sea urchin, I show that the first radially arranged structures, the five primary podia, form from a dorsal and a ventral hydrocoele at the oral end of the archenteron. There is a bilateral plane of symmetry through the podia, the mouth, the archenteron and the blastopore. This adult bilateral plane is thus homologous with the bilateral plane of bilateral metazoans and a relationship between the radial and bilateral body plans is identified. I conclude that echinoderms retain and use the bilateral patterning genes of the common deuterostome ancestor. Homologies with the early echinoderms of the Cambrian era and between the dorsal hydrocoele, the chordate notochord and the proboscis coelom of hemichordates become evident.

Zebrafish dentition in comparative context

Studies of the zebrafish (Danio rerio) promise to contribute much to an understanding of the developmental genetic mechanisms underlying diversification of the vertebrate dentition. Tooth development, structure, and replacement in the zebrafish largely reflect the primitive condition of jawed vertebrates, providing a basis for comparison with features of the more extensively studied mammalian dentition. A distinctive derived feature of the zebrafish dentition is restriction of teeth to a single pair of pharyngeal bones. Such reduction of the dentition, characteristic of the order Cypriniformes, has never been reversed, despite subsequent and extensive diversification of the group in numbers of species and variety of feeding modes. Studies of the developmental genetic mechanism of dentition reduction in the zebrafish suggest a potential explanation for irreversibility in that tooth loss seems to be associated with loss of developmental activators rather than gain of repressors. The zebrafish and other members of the family Cyprinidae exhibit species-specific numbers and arrangements of pharyngeal teeth, and extensive variation in tooth shape also occurs within the family. Mutant screens and experimental alteration of gene expression in the zebrafish are likely to yield variant tooth number and shape phenotypes that can be compared with those occurring naturally within the Cyprinidae. Such studies may reveal the relative contribution to trends in dental evolution of biases in the generation of variation and sorting of this variation by selection or drift.

Comparative morphometrics of the primate apical tuft

The relationship between the structure and function of the primate apical tuft is poorly understood. This study addresses several hypotheses about apical tuft morphology using a large modern primate comparative sample. Two indices of tuft size are employed: expansion and robusticity. First, comparisons of relative apical tuft size were drawn among extant nonhuman primate groups in terms of locomotion and phylogenetic category. Both of these factors appear to play a role in apical tuft size among nonhuman primates. Suspensory primates and all platyrrhines had the smallest apical tufts, while terrestrial quadrupeds and all strepsirrhines (regardless of locomotor category) had the largest tufts. Similarly, hypotheses regarding the apical tufts of hominins, especially the large tufts of Neandertals were addressed using a comparison of modern warm- and cold-adapted humans. The results showed that cold-adapted populations possessed smaller apical tufts than did warm-adapted groups. Therefore, the cold-adaptation hypothesis for Neandertal distal phalangeal morphology is not supported. Also, early modern and Early Upper Paleolithic humans had apical tufts that were significantly less expanded and less robust than those of Neandertals. The hypothesis that a large apical tuft serves as support for an expanded digital pulp is supported by radiographic analysis of modern humans in that a significant correlation was discovered between the width of the apical tuft and the width of the pulp. The implications of these findings for hypotheses about the association of apical tuft size and tool making in the hominin fossil record are discussed.

A comparative volumetric analysis of the amygdaloid complex and basolateral division in the human and ape brain

The amygdaloid complex functions to facilitate effective appraisal of the social environment and is an essential component of the neural systems subserving social behavior. Despite its critical role in mediating social interaction, the amygdaloid complex has not attracted the same attention as the isocortex in most evolutionary analyses. We performed a comparative analysis of the amygdaloid complex in the hominoids to address the lack of comparative information available for this structure in the hominoid brain. We demarcated the amygdaloid complex and the three nuclei constituting its basolateral division, the lateral, basal, and accessory basal nuclei, in 12 histological series representing all six hominoid species. The volumes obtained for these areas were subjected to allometric analyses to determine whether any species deviated from expected values based on the other hominoids. Differences between groups were addressed using nonparametric comparisons of means. The human lateral nucleus was larger than predicted for an ape of human brain size and occupied the majority of the basolateral division, whereas the basal nucleus was the largest of the basolateral nuclei in all ape species. In orangutans the amygdala and basolateral division were smaller than in the African apes. While the gorilla had a smaller than predicted lateral nucleus, its basal and accessory basal nuclei were larger than predicted. These differences may reflect volumetric changes occurring in interconnected cortical areas, specifically the temporal lobe and orbitofrontal cortex, which also subserve social behavior and cognition, suggesting that this system may be acted upon in hominoid and hominid evolution.