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101
Pita S, Panzera F, Sánchez A, Panzera Y, Palomeque T, Lorite P. Distribution and evolution of repeated sequences in genomes of Triatominae (Hemiptera-Reduviidae) inferred from genomic in situ hybridization. PLoS One 2014;9:e114298. [PMID: 25478792 PMCID: PMC4257613 DOI: 10.1371/journal.pone.0114298] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2014] [Accepted: 11/07/2014] [Indexed: 11/18/2022]  Open
102
Hornett EA, Moran B, Reynolds LA, Charlat S, Tazzyman S, Wedell N, Jiggins CD, Hurst GDD. The evolution of sex ratio distorter suppression affects a 25 cM genomic region in the butterfly Hypolimnas bolina. PLoS Genet 2014;10:e1004822. [PMID: 25474676 PMCID: PMC4256269 DOI: 10.1371/journal.pgen.1004822] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2014] [Accepted: 10/15/2014] [Indexed: 12/11/2022]  Open
103
Xu J, Wang Y, Li Z, Ling L, Zeng B, James AA, Tan A, Huang Y. Transcription activator-like effector nuclease (TALEN)-mediated female-specific sterility in the silkworm, Bombyx mori. INSECT MOLECULAR BIOLOGY 2014;23:800-7. [PMID: 25125145 PMCID: PMC4412852 DOI: 10.1111/imb.12125] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
104
Morales M, Martínez-Paz P, Martín R, Planelló R, Urien J, Martínez-Guitarte JL, Morcillo G. Transcriptional changes induced by in vivo exposure to pentachlorophenol (PCP) in Chironomus riparius (Diptera) aquatic larvae. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2014;157:1-9. [PMID: 25306060 DOI: 10.1016/j.aquatox.2014.09.009] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/02/2014] [Revised: 09/22/2014] [Accepted: 09/23/2014] [Indexed: 06/04/2023]
105
Schneider SE, Thomas JH. Accidental genetic engineers: horizontal sequence transfer from parasitoid wasps to their Lepidopteran hosts. PLoS One 2014;9:e109446. [PMID: 25296163 PMCID: PMC4190172 DOI: 10.1371/journal.pone.0109446] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2014] [Accepted: 09/04/2014] [Indexed: 11/18/2022]  Open
106
Sharakhova MV, Antonio-Nkondjio C, Xia A, Ndo C, Awono-Ambene P, Simard F, Sharakhov IV. Polymorphic chromosomal inversions in Anopheles moucheti, a major malaria vector in Central Africa. MEDICAL AND VETERINARY ENTOMOLOGY 2014;28:337-340. [PMID: 24192050 PMCID: PMC4010561 DOI: 10.1111/mve.12037] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2013] [Revised: 08/29/2013] [Accepted: 09/09/2013] [Indexed: 06/02/2023]
107
Ortiz MF, Wallau GL, Graichen DÂS, Loreto ELS. An evaluation of the ecological relationship between Drosophila species and their parasitoid wasps as an opportunity for horizontal transposon transfer. Mol Genet Genomics 2014;290:67-78. [PMID: 25146840 DOI: 10.1007/s00438-014-0900-y] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2014] [Accepted: 08/12/2014] [Indexed: 11/26/2022]
108
Wei W, Xin H, Roy B, Dai J, Miao Y, Gao G. Heritable genome editing with CRISPR/Cas9 in the silkworm, Bombyx mori. PLoS One 2014;9:e101210. [PMID: 25013902 PMCID: PMC4094479 DOI: 10.1371/journal.pone.0101210] [Citation(s) in RCA: 57] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2013] [Accepted: 06/04/2014] [Indexed: 01/06/2023]  Open
109
Bloch G, Cohen M. The expression and phylogenetics of the Inhibitor Cysteine Knot peptide OCLP1 in the honey bee Apis mellifera. JOURNAL OF INSECT PHYSIOLOGY 2014;65:1-8. [PMID: 24721445 DOI: 10.1016/j.jinsphys.2014.04.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2013] [Revised: 03/27/2014] [Accepted: 04/02/2014] [Indexed: 06/03/2023]
110
Zheng Y, Zhang L. Effect of Incomplete Lineage Sorting On Tree-Reconciliation-Based Inference of Gene Duplication. IEEE/ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS 2014;11:477-485. [PMID: 26356016 DOI: 10.1109/tcbb.2013.2297913] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
111
Boley N, Stoiber MH, Booth BW, Wan KH, Hoskins RA, Bickel PJ, Celniker SE, Brown JB. Genome-guided transcript assembly by integrative analysis of RNA sequence data. Nat Biotechnol 2014;32:341-6. [PMID: 24633242 PMCID: PMC4037530 DOI: 10.1038/nbt.2850] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2013] [Accepted: 02/11/2014] [Indexed: 01/31/2023]
112
Iovino N. Drosophila epigenome reorganization during oocyte differentiation and early embryogenesis. Brief Funct Genomics 2014;13:246-53. [PMID: 24665128 DOI: 10.1093/bfgp/elu007] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
113
Sievers C, Comoglio F, Seimiya M, Merdes G, Paro R. A deterministic analysis of genome integrity during neoplastic growth in Drosophila. PLoS One 2014;9:e87090. [PMID: 24516544 PMCID: PMC3916295 DOI: 10.1371/journal.pone.0087090] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2013] [Accepted: 12/19/2013] [Indexed: 11/18/2022]  Open
114
Makunin IV, Shloma VV, Stephen SJ, Pheasant M, Belyakin SN. Comparison of ultra-conserved elements in drosophilids and vertebrates. PLoS One 2013;8:e82362. [PMID: 24349264 PMCID: PMC3862641 DOI: 10.1371/journal.pone.0082362] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2013] [Accepted: 10/24/2013] [Indexed: 11/18/2022]  Open
115
Choy A, Severo MS, Sun R, Girke T, Gillespie JJ, Pedra JHF. Decoding the ubiquitin-mediated pathway of arthropod disease vectors. PLoS One 2013;8:e78077. [PMID: 24205097 PMCID: PMC3804464 DOI: 10.1371/journal.pone.0078077] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2013] [Accepted: 09/16/2013] [Indexed: 11/19/2022]  Open
116
Shi YY, Sun LX, Huang ZY, Wu XB, Zhu YQ, Zheng HJ, Zeng ZJ. A SNP based high-density linkage map of Apis cerana reveals a high recombination rate similar to Apis mellifera. PLoS One 2013;8:e76459. [PMID: 24130775 PMCID: PMC3794977 DOI: 10.1371/journal.pone.0076459] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2013] [Accepted: 08/24/2013] [Indexed: 11/21/2022]  Open
117
Morozov VY, Ioshikhes IP. Optimized position weight matrices in prediction of novel putative binding sites for transcription factors in the Drosophila melanogaster genome. PLoS One 2013;8:e68712. [PMID: 23936309 PMCID: PMC3735551 DOI: 10.1371/journal.pone.0068712] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2013] [Accepted: 05/30/2013] [Indexed: 12/01/2022]  Open
118
Staats M, Erkens RHJ, van de Vossenberg B, Wieringa JJ, Kraaijeveld K, Stielow B, Geml J, Richardson JE, Bakker FT. Genomic treasure troves: complete genome sequencing of herbarium and insect museum specimens. PLoS One 2013;8:e69189. [PMID: 23922691 PMCID: PMC3726723 DOI: 10.1371/journal.pone.0069189] [Citation(s) in RCA: 124] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2013] [Accepted: 06/03/2013] [Indexed: 12/03/2022]  Open
119
Bickel RD, Dunham JP, Brisson JA. Widespread selection across coding and noncoding DNA in the pea aphid genome. G3 (BETHESDA, MD.) 2013;3:993-1001. [PMID: 23589520 PMCID: PMC3689810 DOI: 10.1534/g3.113.005793] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/31/2013] [Accepted: 04/08/2013] [Indexed: 12/03/2022]
120
Duncan EJ, Leask MP, Dearden PK. The pea aphid (Acyrthosiphon pisum) genome encodes two divergent early developmental programs. Dev Biol 2013;377:262-74. [PMID: 23416037 DOI: 10.1016/j.ydbio.2013.01.036] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2012] [Revised: 01/18/2013] [Accepted: 01/29/2013] [Indexed: 12/28/2022]
121
Zhang Z, Hsieh B, Poe A, Anderson J, Ocorr K, Gibson G, Bodmer R. Complex genetic architecture of cardiac disease in a wild type inbred strain of Drosophila melanogaster. PLoS One 2013;8:e62909. [PMID: 23638165 PMCID: PMC3639251 DOI: 10.1371/journal.pone.0062909] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2013] [Accepted: 03/26/2013] [Indexed: 11/19/2022]  Open
122
Perrat PN, DasGupta S, Wang J, Theurkauf W, Weng Z, Rosbash M, Waddell S. Transposition-driven genomic heterogeneity in the Drosophila brain. Science 2013;340:91-5. [PMID: 23559253 PMCID: PMC3887341 DOI: 10.1126/science.1231965] [Citation(s) in RCA: 181] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
123
Raychoudhury R, Sen R, Cai Y, Sun Y, Lietze VU, Boucias DG, Scharf ME. Comparative metatranscriptomic signatures of wood and paper feeding in the gut of the termite Reticulitermes flavipes (Isoptera: Rhinotermitidae). INSECT MOLECULAR BIOLOGY 2013;22:155-71. [PMID: 23294456 DOI: 10.1111/imb.12011] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
124
Liu J, Liang A. The complete mitochondrial genome of spittlebug Paphnutius ruficeps (Insecta: Hemiptera: Cercopidae) with a fairly short putative control region. Acta Biochim Biophys Sin (Shanghai) 2013;45:309-19. [PMID: 23532251 DOI: 10.1093/abbs/gmt009] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]  Open
125
Keeling CI, Yuen MMS, Liao NY, Roderick Docking T, Chan SK, Taylor GA, Palmquist DL, Jackman SD, Nguyen A, Li M, Henderson H, Janes JK, Zhao Y, Pandoh P, Moore R, Sperling FAH, W Huber DP, Birol I, Jones SJM, Bohlmann J. Draft genome of the mountain pine beetle, Dendroctonus ponderosae Hopkins, a major forest pest. Genome Biol 2013;14:R27. [PMID: 23537049 PMCID: PMC4053930 DOI: 10.1186/gb-2013-14-3-r27] [Citation(s) in RCA: 201] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2012] [Revised: 03/08/2013] [Accepted: 03/27/2013] [Indexed: 01/19/2023]  Open
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