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Piątek M, Stryjak-Bogacka M, Czachura P. Arthrocatenales, a new order of extremophilic fungi in the Dothideomycetes. MycoKeys 2024; 108:47-74. [PMID: 39220356 PMCID: PMC11362667 DOI: 10.3897/mycokeys.108.128033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2024] [Accepted: 07/25/2024] [Indexed: 09/04/2024] Open
Abstract
The widely treated order Capnodiales is one of the most important orders in the class Dothideomycetes. Recently, the order Capnodiales s. lat. was reassessed and split into seven orders (Capnodiales s. str., Cladosporiales, Comminutisporales, Mycosphaerellales, Neophaeothecales, Phaeothecales and Racodiales) based on multi-locus phylogeny, morphology and life strategies. In this study, two Arthrocatena strains isolated from sooty mould communities on the leaves of Tiliacordata and needles of Pinusnigra in southern Poland were analyzed. Multi-locus phylogenetic analyses (ITS-LSU-SSU-rpb2-tef1) along with morphological examination showed that they belong to Capnobotryellaantalyensis, which represents a sister taxon to Arthrocatenatenebrosa. Capnobotryellaantalyensis is a rock-inhabiting fungus described from Turkey. The following new combination is proposed: Arthrocatenaantalyensis. Phylogenetic analyses also showed that Arthrocatena and related genus Hyphoconis, both known previously only from rocks, form a sister lineage to orders Cladosporiales and Comminutisporales. The new order Arthrocatenales and new family Arthrocatenaceae are proposed to this clade. Representatives of this order are extremophilic fungi that live on rocks and in sooty mould communities.
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Affiliation(s)
- Marcin Piątek
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512 Kraków, PolandW. Szafer Institute of Botany, Polish Academy of SciencesKrakówPoland
| | - Monika Stryjak-Bogacka
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512 Kraków, PolandW. Szafer Institute of Botany, Polish Academy of SciencesKrakówPoland
| | - Paweł Czachura
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512 Kraków, PolandW. Szafer Institute of Botany, Polish Academy of SciencesKrakówPoland
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Tian WH, Jin Y, Liao YC, Faraj TK, Guo XY, Maharachchikumbura SSN. New and Interesting Pine-Associated Hyphomycetes from China. J Fungi (Basel) 2024; 10:546. [PMID: 39194872 DOI: 10.3390/jof10080546] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2024] [Revised: 07/26/2024] [Accepted: 08/01/2024] [Indexed: 08/29/2024] Open
Abstract
Pine trees play a crucial role in the forests of Sichuan Province, boasting rich species diversity and a lengthy evolutionary history. However, research and investigation on fungi associated with pine trees are insufficient. This study investigated the diversity of hyphomycetes fungi associated with pine trees in Sichuan Province, China. During the survey, we collected five specimens of hyphomycetes from branches and bark of species of Pinus. Five barcodes were selected for study and sequenced, including ITS, SSU, LSU, TEF1, and RPB2. Morphological examination and multi-locus phylogenetic analyses revealed three new species, viz. Catenulostroma pini sp. nov. within Teratosphaeriaceae, Kirschsteiniothelia longisporum sp. nov. within Kirschsteiniotheliaceae, Sporidesmiella sichuanensis sp. nov. within Junewangiaceae, and two known species, Paradictyoarthrinium diffractum and P. hydei within Paradictyoarthriniaceae, which are the new host records from Pinus species. Catenulostroma pini, distinguished from other species in the genus by its unique morphology, has three conidial morphologies: small terminal helicoconidia, scolecoconidia with many septa, and phragmoconidia conidia. Kirschsteiniothelia longisporum has longer spores when compared to the other species in the genus. According to phylogenetic analysis, Sporidesmiella sichuanensis formed an independent clade sister to S. aquatica and S. juncicola, distinguished by differences in conidial size.
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Affiliation(s)
- Wen-Hui Tian
- Center for Informational Biology, College of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, China
| | - Yan Jin
- Center for Informational Biology, College of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, China
| | - Yue-Chi Liao
- Center for Informational Biology, College of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, China
| | - Turki Kh Faraj
- Department of Soil Science, College of Food and Agriculture Sciences, King Saud University, P.O. Box 145111, Riyadh 11362, Saudi Arabia
| | - Xin-Yong Guo
- College of Life Science, Shihezi University, Shihezi 832000, China
| | - Sajeewa S N Maharachchikumbura
- Center for Informational Biology, College of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 611731, China
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Piątek M, Stryjak-Bogacka M, Czachura P, Owczarek-Kościelniak M. The genus Rachicladosporium: introducing new species from sooty mould communities and excluding cold adapted species. Sci Rep 2023; 13:22795. [PMID: 38129458 PMCID: PMC10739867 DOI: 10.1038/s41598-023-49696-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 12/11/2023] [Indexed: 12/23/2023] Open
Abstract
The fungal genus Rachicladosporium (Cladosporiales, Cladosporiaceae), typified by cladosporium-like Rachicladosporium luculiae, includes a morphologically diverse assemblage of species. The species of this genus were reported from different substrates, habitats and environments, including plant leaves and needles, twig, black mould on baobab trees, rocks and insects. In this study, four new Rachicladosporium species (R. europaeum, R. ignacyi, R. kajetanii, R. silesianum) isolated from sooty mould communities covering leaves and needles of trees and shrubs in Poland are described. The new species are delineated based on morphological characteristics and molecular phylogenetic analyses using concatenated ITS, LSU, and rpb2 sequences. All newly described species are nested in the main Rachicladosporium lineage (centred around the type species), which contains species that are able to grow at 25 °C. By contrast, four cold adapted, endolithic species known from Antarctica (R. antarcticum, R. aridum, R. mcmurdoi) and Italian Alps (R. monterosanum) form distant phylogenetic lineage and do not grow at this temperature. Therefore, they are accommodated in the new genus Cryoendolithus, typified by Cryoendolithus mcmurdoi.
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Affiliation(s)
- Marcin Piątek
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512, Kraków, Poland.
| | - Monika Stryjak-Bogacka
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512, Kraków, Poland
| | - Paweł Czachura
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512, Kraków, Poland
| | - Magdalena Owczarek-Kościelniak
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512, Kraków, Poland
- Norwegian Veterinary Institute, P.O. Box 64, 1431, Ås, Norway
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Ujat AH, Ono T, Hattori Y, Nakashima C. Re-Examination of Several Elsinoë Species Reported from Japan. MYCOBIOLOGY 2023; 51:122-138. [PMID: 37359956 PMCID: PMC10288934 DOI: 10.1080/12298093.2023.2219049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Revised: 05/11/2023] [Accepted: 05/21/2023] [Indexed: 06/28/2023]
Abstract
Elsinoë are plant pathogenic fungi that cause scabs, spotted anthracnose, and some morphological distortions on various plants, including woody plants, economically important crops, and ornamental plants. Taxonomical reexamination of Elsinoë species in Japan has not yet been conducted based on the modern species criteria. In this study, several Japanese isolates were reexamine based on the morphological and molecular-phylogenetic analysis of the internal transcribed spacer region (ITS), large subunit gene (LSU)m and protein-coding gene such as RNA polymerase II subunit (rpb2) and Translation elongation factor 1-alpha (tef). Japanese isolates were divided into four clades and three new species, Elsinoë hydrangeae, E. sumire, and E. tanashiensis were proposed. One species, Sphaceloma akebiae, was transferred to the genus Elsinoë.
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Affiliation(s)
- Anysia Hedy Ujat
- Graduate School of Bioresources, Mie University, Tsu, Mie, Japan
| | - Tsuyoshi Ono
- Tokyo Metropolitan Agriculture and Forestry Research Center, Tachikawa, Tokyo, Japan
| | - Yukako Hattori
- Department of Mushroom Science and Forest Microbiology, Forestry and Forest Product Research Institute, Tsukuba, Ibaraki, Japan
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Wu F, Feng Z, Wang M, Wang Q. Proposal of Four New Aureobasidium Species for Exopolysaccharide Production. J Fungi (Basel) 2023; 9:jof9040447. [PMID: 37108901 PMCID: PMC10145156 DOI: 10.3390/jof9040447] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2023] [Revised: 04/02/2023] [Accepted: 04/03/2023] [Indexed: 04/08/2023] Open
Abstract
In this study, 99 strains of Aureobasidium species were isolated from various samples collected from different locations in China, among which 14 isolates showed different morphological characteristics to other strains identified as known Aureobasidium species. Based on morphological characteristics, those 14 strains were classified into four groups, represented by stains of KCL139, MDSC−10, XZY411−4, and MQL9−100, respectively. Molecular analysis of the internal transcriptional spacer (ITS) and part of the large ribosome subunit (D1/D2 domains) indicated that those four groups represent four new species in the Aureobasidium. Therefore, the names Aureobasidium insectorum sp. nov., A. planticola sp. nov., A. motuoense sp. nov., and A. intercalariosporum sp. nov. are proposed for KCL139, MDSC−10, XZY411−4, and MQL9−100, respectively. We also found that there were differences in the yield of exopolysaccharides (EPS) among and within species, indicating strain-related exopolysaccharide-producing diversity.
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Affiliation(s)
- Feng Wu
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, China
| | - Zixuan Feng
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, China
| | - Manman Wang
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, China
| | - Qiming Wang
- School of Life Sciences, Institute of Life Sciences and Green Development, Hebei University, Baoding 071002, China
- Engineering Laboratory of Microbial Breeding and Preservation of Hebei Province, Hebei University, Baoding 071002, China
- Key Laboratory of Microbial Diversity Research and Application of Hebei Province, Hebei University, Baoding 071002, China
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Jayawardena RS, Hyde KD, Wang S, Sun YR, Suwannarach N, Sysouphanthong P, Abdel-Wahab MA, Abdel-Aziz FA, Abeywickrama PD, Abreu VP, Armand A, Aptroot A, Bao DF, Begerow D, Bellanger JM, Bezerra JDP, Bundhun D, Calabon MS, Cao T, Cantillo T, Carvalho JLVR, Chaiwan N, Chen CC, Courtecuisse R, Cui BK, Damm U, Denchev CM, Denchev TT, Deng CY, Devadatha B, de Silva NI, dos Santos LA, Dubey NK, Dumez S, Ferdinandez HS, Firmino AL, Gafforov Y, Gajanayake AJ, Gomdola D, Gunaseelan S, Shucheng-He, Htet ZH, Kaliyaperumal M, Kemler M, Kezo K, Kularathnage ND, Leonardi M, Li JP, Liao C, Liu S, Loizides M, Luangharn T, Ma J, Madrid H, Mahadevakumar S, Maharachchikumbura SSN, Manamgoda DS, Martín MP, Mekala N, Moreau PA, Mu YH, Pahoua P, Pem D, Pereira OL, Phonrob W, Phukhamsakda C, Raza M, Ren GC, Rinaldi AC, Rossi W, Samarakoon BC, Samarakoon MC, Sarma VV, Senanayake IC, Singh A, Souza MF, Souza-Motta CM, Spielmann AA, Su W, Tang X, Tian X, Thambugala KM, Thongklang N, Tennakoon DS, Wannathes N, Wei D, Welti S, Wijesinghe SN, Yang H, Yang Y, Yuan HS, Zhang H, Zhang J, Balasuriya A, Bhunjun CS, Bulgakov TS, Cai L, Camporesi E, Chomnunti P, Deepika YS, Doilom M, Duan WJ, Han SL, Huanraluek N, Jones EBG, Lakshmidevi N, Li Y, Lumyong S, Luo ZL, Khuna S, Kumla J, Manawasinghe IS, Mapook A, Punyaboon W, Tibpromma S, Lu YZ, Yan J, Wang Y. Fungal diversity notes 1512-1610: taxonomic and phylogenetic contributions on genera and species of fungal taxa. FUNGAL DIVERS 2023; 117:1-272. [PMID: 36852303 PMCID: PMC9948003 DOI: 10.1007/s13225-022-00513-0] [Citation(s) in RCA: 17] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Accepted: 12/06/2022] [Indexed: 02/25/2023]
Abstract
This article is the 14th in the Fungal Diversity Notes series, wherein we report 98 taxa distributed in two phyla, seven classes, 26 orders and 50 families which are described and illustrated. Taxa in this study were collected from Australia, Brazil, Burkina Faso, Chile, China, Cyprus, Egypt, France, French Guiana, India, Indonesia, Italy, Laos, Mexico, Russia, Sri Lanka, Thailand, and Vietnam. There are 59 new taxa, 39 new hosts and new geographical distributions with one new combination. The 59 new species comprise Angustimassarina kunmingense, Asterina lopi, Asterina brigadeirensis, Bartalinia bidenticola, Bartalinia caryotae, Buellia pruinocalcarea, Coltricia insularis, Colletotrichum flexuosum, Colletotrichum thasutense, Coniochaeta caraganae, Coniothyrium yuccicola, Dematipyriforma aquatic, Dematipyriforma globispora, Dematipyriforma nilotica, Distoseptispora bambusicola, Fulvifomes jawadhuvensis, Fulvifomes malaiyanurensis, Fulvifomes thiruvannamalaiensis, Fusarium purpurea, Gerronema atrovirens, Gerronema flavum, Gerronema keralense, Gerronema kuruvense, Grammothele taiwanensis, Hongkongmyces changchunensis, Hypoxylon inaequale, Kirschsteiniothelia acutisporum, Kirschsteiniothelia crustaceum, Kirschsteiniothelia extensum, Kirschsteiniothelia septemseptatum, Kirschsteiniothelia spatiosum, Lecanora immersocalcarea, Lepiota subthailandica, Lindgomyces guizhouensis, Marthe asmius pallidoaurantiacus, Marasmius tangerinus, Neovaginatispora mangiferae, Pararamichloridium aquisubtropicum, Pestalotiopsis piraubensis, Phacidium chinaum, Phaeoisaria goiasensis, Phaeoseptum thailandicum, Pleurothecium aquisubtropicum, Pseudocercospora vernoniae, Pyrenophora verruculosa, Rhachomyces cruralis, Rhachomyces hyperommae, Rhachomyces magrinii, Rhachomyces platyprosophi, Rhizomarasmius cunninghamietorum, Skeletocutis cangshanensis, Skeletocutis subchrysella, Sporisorium anadelphiae-leptocomae, Tetraploa dashaoensis, Tomentella exiguelata, Tomentella fuscoaraneosa, Tricholomopsis lechatii, Vaginatispora flavispora and Wetmoreana blastidiocalcarea. The new combination is Torula sundara. The 39 new records on hosts and geographical distribution comprise Apiospora guiyangensis, Aplosporella artocarpi, Ascochyta medicaginicola, Astrocystis bambusicola, Athelia rolfsii, Bambusicola bambusae, Bipolaris luttrellii, Botryosphaeria dothidea, Chlorophyllum squamulosum, Colletotrichum aeschynomenes, Colletotrichum pandanicola, Coprinopsis cinerea, Corylicola italica, Curvularia alcornii, Curvularia senegalensis, Diaporthe foeniculina, Diaporthe longicolla, Diaporthe phaseolorum, Diatrypella quercina, Fusarium brachygibbosum, Helicoma aquaticum, Lepiota metulispora, Lepiota pongduadensis, Lepiota subvenenata, Melanconiella meridionalis, Monotosporella erecta, Nodulosphaeria digitalis, Palmiascoma gregariascomum, Periconia byssoides, Periconia cortaderiae, Pleopunctum ellipsoideum, Psilocybe keralensis, Scedosporium apiospermum, Scedosporium dehoogii, Scedosporium marina, Spegazzinia deightonii, Torula fici, Wiesneriomyces laurinus and Xylaria venosula. All these taxa are supported by morphological and multigene phylogenetic analyses. This article allows the researchers to publish fungal collections which are important for future studies. An updated, accurate and timely report of fungus-host and fungus-geography is important. We also provide an updated list of fungal taxa published in the previous fungal diversity notes. In this list, erroneous taxa and synonyms are marked and corrected accordingly.
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Affiliation(s)
- Ruvishika S. Jayawardena
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225 P.R. China
| | - Song Wang
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Ya-Ru Sun
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Department of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, 550025 Guizhou China
| | - Nakarin Suwannarach
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Phongeun Sysouphanthong
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Biotechnology and Ecology Institute, Ministry of Agriculture and Forestry, P.O.Box: 811, Vientiane Capital, Lao PDR
| | - Mohamed A. Abdel-Wahab
- Department of Botany and Microbiology, Faculty of Science, Sohag University, Sohag, 82524 Egypt
| | - Faten A. Abdel-Aziz
- Department of Botany and Microbiology, Faculty of Science, Sohag University, Sohag, 82524 Egypt
| | - Pranami D. Abeywickrama
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Beijing Key Laboratory of Environment-Friendly Management on Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097 China
| | - Vanessa P. Abreu
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil
| | - Alireza Armand
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - André Aptroot
- Laboratório de Botânica/Liquenologia, Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Avenida Costa e Silva S/N, Bairro Universitário, Campo Grande, Mato Grosso do Sul CEP 79070-900 Brazil
| | - Dan-Feng Bao
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- College of Agriculture and Biological Sciences, Dali University, Dali, 671003 Yunnan China
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Dominik Begerow
- Institute of Plant Science and Microbiology, Universität Hamburg, Organismic Botany and Mycology, Ohnhorststr. 18, 22609 Hamburg, Germany
| | - Jean-Michel Bellanger
- CEFE, CNRS, Univ. Montpellier, EPHE, IRD, INSERM, 1919, Route de Mende, 34293 Montpellier Cedex 5, France
| | - Jadson D. P. Bezerra
- Setor de Micologia, Departamento de Biociências e Tecnologia, Instituto de Patologia Tropical e Saúde Pública, Universidade Federal de Goiás, Rua 235, S/N, Setor Universitário, Goiânia, GO CEP: 74605-050 Brazil
| | - Digvijayini Bundhun
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Mark S. Calabon
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Division of Biological Sciences, College of Arts and Sciences, University of the Philippines Visayas, 5023 Miagao, Iloilo Philippines
| | - Ting Cao
- CAS Key Laboratory of Forest Ecology and Management, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, 110164 China
- University of the Chinese Academy of Sciences, Beijing, 100049 China
| | - Taimy Cantillo
- Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Av. Transnordestina, S/N – Novo Horizonte, Feira de Santana, BA 44036-900 Brazil
| | - João L. V. R. Carvalho
- Departamento de Micologia Prof. Chaves Batista, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, S/N, Centro de Biociências, Cidade Universitária, Recife, PE CEP: 50670-901 Brazil
| | - Napalai Chaiwan
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Che-Chih Chen
- Biodiversity Research Center, Academia Sinica, 128 Academia Road, Sec. 2, Nankang, 11529 Taipei Taiwan
| | - Régis Courtecuisse
- Faculty of Pharmacy of Lille, EA 4515 (LGCgE), Univ Lille, 59000 Lille, France
| | - Bao-Kai Cui
- Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing, 100083 China
| | - Ulrike Damm
- Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany
| | - Cvetomir M. Denchev
- Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 2 Gagarin St., 1113 Sofia, Bulgaria
- IUCN SSC Rusts and Smuts Specialist Group, Sofia, Bulgaria
| | - Teodor T. Denchev
- Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 2 Gagarin St., 1113 Sofia, Bulgaria
- IUCN SSC Rusts and Smuts Specialist Group, Sofia, Bulgaria
| | - Chun Y. Deng
- Guizhou Institute of Biology, Guizhou Academy of Sciences, Shanxi Road No. 1, Yunyan District, Guiyang, 550001 China
| | - Bandarupalli Devadatha
- Virus Diagnostic and Research Lab, Sri Venkateswara Institute of Medical Sciences, Tirupati, Andhra Pradesh 517501 India
- Department of Biotechnology, Pondicherry University, Kalapet, Pondicheryy 605014 India
| | - Nimali I. de Silva
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Lidiane A. dos Santos
- Departamento de Micologia, Universidade Federal de Pernambuco, Recife, Pernambuco Brazil
| | - Nawal K. Dubey
- Center of Advanced Study in Botany, Institute of Sciences, Banaras Hindu University, Varanasi, Uttar Pradesh 221005 India
| | - Sylvain Dumez
- Faculty of Pharmacy of Lille, EA 4515 (LGCgE), Univ Lille, 59000 Lille, France
| | - Himashi S. Ferdinandez
- Department of Botany, Faculty of Applied Sciences, University of Sri Jayewardenepura, Nugegoda, Sri Lanka
| | - André L. Firmino
- Universidade Federal de Uberlândia, Instituto de Ciências Agrárias, Monte Carmelo, Minas Gerais Brazil
| | - Yusufjon Gafforov
- Laboratory of Mycology, Institute of Botany, Academy of Sciences of Republic of Uzbekistan, 32 Durmon Yuli Street, Tashkent, Uzbekistan 100125
- AKFA University, 264 Milliy Bog Street, Tashkent, Uzbekistan 111221
| | - Achala J. Gajanayake
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Deecksha Gomdola
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Sugantha Gunaseelan
- Centre for Advanced Studies in Botany, University of Madras, Guindy Campus, Chennai, 600025 India
| | - Shucheng-He
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Shandong Provincial Key Laboratory of Water and Soil Conservation and Environmental Protection, College of Resources and Environment, Linyi University, West Side of North Section of Industrial Avenue, Linyi, 276000 China
| | - Zin H. Htet
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Malarvizhi Kaliyaperumal
- Centre for Advanced Studies in Botany, University of Madras, Guindy Campus, Chennai, 600025 India
| | - Martin Kemler
- Institute of Plant Science and Microbiology, Universität Hamburg, Organismic Botany and Mycology, Ohnhorststr. 18, 22609 Hamburg, Germany
| | - Kezhocuyi Kezo
- Centre for Advanced Studies in Botany, University of Madras, Guindy Campus, Chennai, 600025 India
| | - Nuwan D. Kularathnage
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225 P.R. China
- Key Laboratory of Green Prevention and Control on Fruits and Vegetables in South China, Ministry of Agriculture and Rural Affairs, Zhongkai University of Agriculture and Engineering, Guangdong, 510225 China
| | - Marco Leonardi
- University of L’Aquila Dept. MeSVA, sect. Environmental Sciences via Vetoio, 67100 Coppito, AQ Italy
| | - Ji-Peng Li
- Guizhou Institute of Biology, Guizhou Academy of Sciences, Shanxi Road No. 1, Yunyan District, Guiyang, 550001 China
| | - Chunfang Liao
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225 P.R. China
| | - Shun Liu
- Institute of Microbiology, School of Ecology and Nature Conservation, Beijing Forestry University, Beijing, 100083 China
| | | | - Thatsanee Luangharn
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Jian Ma
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Food and Pharmaceutical Engineering, Guizhou Institute of Technology, Guiyang, 550003 China
| | - Hugo Madrid
- Departamento de Tecnología Médica, Facultad de Ciencias de la Salud, Universidad de Tarapacá, Sede Iquique, Av. Luis Emilio Recabarren, 2477 Iquique, Chile
| | - S. Mahadevakumar
- Forest Pathology Department, KSCSTE-Kerala Forest Research Institute, Peechi, Thrissur, Kerala 680653 India
- Botanical Survey of India, Andaman and Nicobar Regional Centre, Haddo, Port Blair, South Andaman 744102 India
| | | | - Dimuthu S. Manamgoda
- Department of Botany, Faculty of Applied Sciences, University of Sri Jayewardenepura, Nugegoda, Sri Lanka
| | - María P. Martín
- Real Jardín Botánico, RJB-CSIC, Plaza de Murillo 2, 28014 Madrid, Spain
| | - Niranjan Mekala
- Department of Biotechnology, Pondicherry University, Kalapet, Pondicheryy 605014 India
- Department of Botany, Rajiv Gandhi University, Rono Hills, Doimukh, Papum Pare, Itanagar, Arunachal Pradesh 791112 India
| | | | - Yan-Hong Mu
- CAS Key Laboratory of Forest Ecology and Management, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, 110164 China
- University of the Chinese Academy of Sciences, Beijing, 100049 China
| | - Pasouvang Pahoua
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Dhandevi Pem
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Olinto L. Pereira
- Departamento de Fitopatologia, Universidade Federal de Viçosa, Viçosa, Minas Gerais Brazil
| | - Wiphawanee Phonrob
- Microbiology Program, Faculty of Science and Technology, Pibulsongkram Rajabhat University, Phitsanulok, 65000 Thailand
| | - Chayanard Phukhamsakda
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Internationally Cooperative Research Center of China for New Germplasm Breeding of Edible Mushroom, Jilin Agricultural University 38, Changchun, 130118 China
| | - Mubashar Raza
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No. 3, 1st Beichen West Rd., Chaoyang District, Beijing, 100101 China
| | - Guang-Cong Ren
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Andrea C. Rinaldi
- Department of Biomedical Sciences, University of Cagliari, Cittadella Universitaria, 09042 Monserrato, Italy
| | - Walter Rossi
- University of L’Aquila Dept. MeSVA, sect. Environmental Sciences via Vetoio, 67100 Coppito, AQ Italy
| | - Binu C. Samarakoon
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Milan C. Samarakoon
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Vemuri V. Sarma
- Department of Biotechnology, School of Life Sciences, Pondicherry University, R.V. Nagar, Kalapet, Pondicherry 605014 India
| | - Indunil C. Senanayake
- Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225 P.R. China
- Key Laboratory of Green Prevention and Control on Fruits and Vegetables in South China, Ministry of Agriculture and Rural Affairs, Zhongkai University of Agriculture and Engineering, Guangdong, 510225 China
| | - Archana Singh
- Center of Advanced Study in Botany, Institute of Sciences, Banaras Hindu University, Varanasi, Uttar Pradesh 221005 India
| | - Maria F. Souza
- Laboratório de Botânica/Liquenologia, Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Avenida Costa e Silva S/N, Bairro Universitário, Campo Grande, Mato Grosso do Sul CEP 79070-900 Brazil
| | - Cristina M. Souza-Motta
- Departamento de Micologia Prof. Chaves Batista, Universidade Federal de Pernambuco, Av. Prof. Moraes Rego, S/N, Centro de Biociências, Cidade Universitária, Recife, PE CEP: 50670-901 Brazil
| | - Adriano A. Spielmann
- Laboratório de Botânica/Liquenologia, Instituto de Biociências, Universidade Federal de Mato Grosso do Sul, Avenida Costa e Silva S/N, Bairro Universitário, Campo Grande, Mato Grosso do Sul CEP 79070-900 Brazil
| | - Wenxin Su
- Internationally Cooperative Research Center of China for New Germplasm Breeding of Edible Mushroom, Jilin Agricultural University 38, Changchun, 130118 China
| | - Xia Tang
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Engineering and Research Center for Southwest Biopharmaceutical Resource of National Education Ministry of China, Guizhou University, Guiyang, 550025 Guizhou Province China
| | - XingGuo Tian
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Food and Pharmaceutical Engineering, Guizhou Institute of Technology, Guiyang, 550003 China
- Center for Yunnan Plateau Biological Resources Protection and Utilization, Yunnan Engineering Research Center of Fruit Wine, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, 655011 Yunnan China
| | - Kasun M. Thambugala
- Generics and Molecular Biology Unit, Faculty of Applied Sciences, University of Sri Jayewardenepura, Gangodawila, 10250 Nugegoda Sri Lanka
| | - Naritsada Thongklang
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Danushka S. Tennakoon
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Nopparat Wannathes
- Microbiology Program, Faculty of Science and Technology, Pibulsongkram Rajabhat University, Phitsanulok, 65000 Thailand
| | - DingPeng Wei
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, 50200 Thailand
- Shandong Provincial Key Laboratory of Water and Soil Conservation and Environmental Protection, College of Resources and Environment, Linyi University, West Side of North Section of Industrial Avenue, Linyi, 276000 China
| | - Stéphane Welti
- Faculty of Pharmacy of Lille, EA 4515 (LGCgE), Univ Lille, 59000 Lille, France
| | - Subodini N. Wijesinghe
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Hongde Yang
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Shandong Provincial Key Laboratory of Water and Soil Conservation and Environmental Protection, College of Resources and Environment, Linyi University, West Side of North Section of Industrial Avenue, Linyi, 276000 China
| | - Yunhui Yang
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225 P.R. China
| | - Hai-Sheng Yuan
- CAS Key Laboratory of Forest Ecology and Management, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, 110164 China
| | - Huang Zhang
- Shandong Provincial Key Laboratory of Water and Soil Conservation and Environmental Protection, College of Resources and Environment, Linyi University, West Side of North Section of Industrial Avenue, Linyi, 276000 China
| | - Jingyi Zhang
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Food and Pharmaceutical Engineering, Guizhou Institute of Technology, Guiyang, 550003 China
| | - Abhaya Balasuriya
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Chitrabhanu S. Bhunjun
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Timur S. Bulgakov
- Department of Plant Protection, Federal Research Centre the Subtropical Scientific Centre of the Russian Academy of Sciences, Jana Fabriciusa Str. 2/28, Krasnodar Region, Sochi, Russia 354002
| | - Lei Cai
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No. 3, 1st Beichen West Rd., Chaoyang District, Beijing, 100101 China
| | - Erio Camporesi
- A.M.B, Circolo Micologico ‘‘Giovanni Carini’’, C.P. 314, 25121 Brescia, Italy
- A.M.B. Gruppo, Micologico Forlivese ‘‘Antonio Cicognani’’, via Roma 18, 47121 Forlì, Italy
- Società per gli Studi Naturalistici Della Romagna, C.P. 143, 48012 Bagnacavallo, RA Italy
| | - Putarak Chomnunti
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Y. S. Deepika
- Department of Studies in Botany, University of Mysore, Manasagangotri, Mysuru, Karnataka 570006 India
| | - Mingkwan Doilom
- Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225 P.R. China
| | - Wei-Jun Duan
- Ningbo Academy of Inspection and Quarantine, Ningbo, Zhejiang, 315012 PR China
- Ningbo Customs District, Ningbo, 315012 Zhejiang PR China
| | - Shi-Ling Han
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, No. 3, 1st Beichen West Rd., Chaoyang District, Beijing, 100101 China
| | - Naruemon Huanraluek
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - E. B. Gareth Jones
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451 Saudi Arabia
| | - N. Lakshmidevi
- Department of Studies in Botany, University of Mysore, Manasagangotri, Mysuru, Karnataka 570006 India
| | - Yu Li
- Internationally Cooperative Research Center of China for New Germplasm Breeding of Edible Mushroom, Jilin Agricultural University 38, Changchun, 130118 China
| | - Saisamorn Lumyong
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Zong-Long Luo
- School of Food and Pharmaceutical Engineering, Guizhou Institute of Technology, Guiyang, 550003 China
| | - Surapong Khuna
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Jaturong Kumla
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Ishara S. Manawasinghe
- Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, 510225 P.R. China
| | - Ausana Mapook
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Wilawan Punyaboon
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Saowaluck Tibpromma
- Center for Yunnan Plateau Biological Resources Protection and Utilization, Yunnan Engineering Research Center of Fruit Wine, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, 655011 Yunnan China
| | - Yong-Zhong Lu
- School of Food and Pharmaceutical Engineering, Guizhou Institute of Technology, Guiyang, 550003 China
| | - JiYe Yan
- Beijing Key Laboratory of Environment-Friendly Management on Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097 China
| | - Yong Wang
- Department of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, 550025 Guizhou China
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7
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Liu L, Yang J, Zhou S, Gu X, Gou J, Wei Q, Zhang M, Liu Z. Novelties in Microthyriaceae (Microthyriales): Two New Asexual Genera with Three New Species from Freshwater Habitats in Guizhou Province, China. J Fungi (Basel) 2023; 9:jof9020178. [PMID: 36836293 PMCID: PMC9965287 DOI: 10.3390/jof9020178] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Revised: 01/17/2023] [Accepted: 01/24/2023] [Indexed: 02/03/2023] Open
Abstract
Microthyriaceae is typified by the sexual genus Microthyrium, with eight asexual genera. Three interesting isolates were collected during our investigation of freshwater fungi from the wetlands in Guizhou Province, southwest China. Three new asexual morphs are identified. Phylogenetic analyses using ITS and LSU gene regions revealed the placement of these isolates in Microthyriaceae (Microthyriales, Dothideomycetes). Based on the morphology and phylogenetic evidence, two new asexual genera, Paramirandina and Pseudocorniculariella, and three new species, Pa. aquatica, Pa. cymbiformis, and Ps. guizhouensis, are introduced. Descriptions and illustrations of the new taxa are provided, with a phylogenetic tree of Microthyriales and related taxa.
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Affiliation(s)
- Lingling Liu
- Guizhou Institute of Soil and Fertilizer, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China
- Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China
| | - Jing Yang
- Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China
- Center of Excellence in Fungal Research, School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Si Zhou
- Guizhou Provincial Environmental Science Research and Design Institute, Guiyang 550081, China
| | - Xiaofeng Gu
- Guizhou Institute of Soil and Fertilizer, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China
| | - Jiulan Gou
- Guizhou Institute of Soil and Fertilizer, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China
| | - Quanquan Wei
- Guizhou Institute of Soil and Fertilizer, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China
| | - Meng Zhang
- Guizhou Institute of Soil and Fertilizer, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China
| | - Zuoyi Liu
- Guizhou Key Laboratory of Agricultural Biotechnology, Guizhou Academy of Agricultural Sciences, Guiyang 550006, China
- Correspondence: ; Tel.: +86-139-8558-8109
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8
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Liu J, Hu Y, Luo X, Castañeda-Ruíz RF, Xia J, Xu Z, Cui R, Shi X, Zhang L, Ma J. Molecular Phylogeny and Morphology Reveal Four Novel Species of Corynespora and Kirschsteiniothelia ( Dothideomycetes, Ascomycota) from China: A Checklist for Corynespora Reported Worldwide. J Fungi (Basel) 2023; 9:jof9010107. [PMID: 36675928 PMCID: PMC9863821 DOI: 10.3390/jof9010107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2022] [Revised: 01/09/2023] [Accepted: 01/10/2023] [Indexed: 01/15/2023] Open
Abstract
Plant debris are habitats favoring survival and multiplication of various microbial species. During continuing mycological surveys of saprobic microfungi from plant debris in Yunnan Province, China, several Corynespora-like and Dendryphiopsis-like isolates were collected from dead branches of unidentified perennial dicotyledonous plants. Four barcodes, i.e., ITS, LSU, SSU and tef1-α, were amplified and sequenced. Morphological studies and multigene phylogenetic analyses by maximum likelihood and Bayesian inference revealed three new Corynespora species (C. mengsongensis sp. nov., C. nabanheensis sp. nov. and C. yunnanensis sp. nov.) and a new Kirschsteiniothelia species (K. nabanheensis sp. nov.) within Dothideomycetes, Ascomycota. A list of identified and accepted species of Corynespora with major morphological features, host information and locality was compiled. This work improves the knowledge of species diversity of Corynespora and Kirschsteiniothelia in Yunnan Province, China.
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Affiliation(s)
- Jingwen Liu
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Yafen Hu
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Xingxing Luo
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Rafael F. Castañeda-Ruíz
- Instituto de Investigaciones de Sanidad Vegetal, Calle 110 No. 514 e/5ta B y 5ta F, Playa, Havana 17200, Cuba
| | - Jiwen Xia
- Shandong Provincial Key Laboratory for Biology of Vegetable Diseases and Insect Pests, College of Plant Protection, Shandong Agricultural University, Taian 271018, China
| | - Zhaohuan Xu
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Ruqiang Cui
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Xugen Shi
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Lianhu Zhang
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
| | - Jian Ma
- College of Agronomy, Jiangxi Agricultural University, Nanchang 330045, China
- Correspondence:
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9
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Artand S, Mehrabi-koushki M, Tabein S, Hyde KD, Jayawardena RS. Revision of the Microsphaeropsis Complex with Addition of Four New Paramicrosphaeropsis L.W.Hou, L.Cai & Crous Species from Zagrosian Forest Trees in Iran. CRYPTOGAMIE MYCOL 2022. [DOI: 10.5252/cryptogamie-mycologie2022v43a7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Saeid Artand
- Department of Plant Protection, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Khuzestan Province (Iran)
| | - Mehdi Mehrabi-koushki
- Department of Plant Protection, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Khuzestan Province (Iran) and Biotechnology and Bioscience Research Center, Shahid Chamran University of Ahvaz, Ahvaz, Khuzestan Province (Iran)
| | - Saeid Tabein
- Department of Plant Protection, Faculty of Agriculture, Shahid Chamran University of Ahvaz,Ahvaz, Khuzestan Province (Iran)
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, 57100 (Thailand)
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10
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Tan YP, Bishop-Hurley SL, Shivas RG, Cowan DA, Maggs-Kölling G, Maharachchikumbura SSN, Pinruan U, Bransgrove KL, De la Peña-Lastra S, Larsson E, Lebel T, Mahadevakumar S, Mateos A, Osieck ER, Rigueiro-Rodríguez A, Sommai S, Ajithkumar K, Akulov A, Anderson FE, Arenas F, Balashov S, Bañares Á, Berger DK, Bianchinotti MV, Bien S, Bilański P, Boxshall AG, Bradshaw M, Broadbridge J, Calaça FJS, Campos-Quiroz C, Carrasco-Fernández J, Castro JF, Chaimongkol S, Chandranayaka S, Chen Y, Comben D, Dearnaley JDW, Ferreira-Sá AS, Dhileepan K, Díaz ML, Divakar PK, Xavier-Santos S, Fernández-Bravo A, Gené J, Guard FE, Guerra M, Gunaseelan S, Houbraken J, Janik-Superson K, Jankowiak R, Jeppson M, Jurjević Ž, Kaliyaperumal M, Kelly LA, Kezo K, Khalid AN, Khamsuntorn P, Kidanemariam D, Kiran M, Lacey E, Langer GJ, López-Llorca LV, Luangsa-Ard JJ, Lueangjaroenkit P, Lumbsch HT, Maciá-Vicente JG, Mamatha Bhanu LS, Marney TS, Marqués-Gálvez JE, Morte A, Naseer A, Navarro-Ródenas A, Oyedele O, Peters S, Piskorski S, Quijada L, Ramírez GH, Raja K, Razzaq A, Rico VJ, Rodríguez A, Ruszkiewicz-Michalska M, Sánchez RM, Santelices C, Savitha AS, Serrano M, Leonardo-Silva L, Solheim H, Somrithipol S, Sreenivasa MY, Stępniewska H, Strapagiel D, Taylor T, Torres-Garcia D, Vauras J, Villarreal M, Visagie CM, Wołkowycki M, Yingkunchao W, Zapora E, Groenewald JZ, Crous PW. Fungal Planet description sheets: 1436-1477. PERSOONIA 2022; 49:261-350. [PMID: 38234383 PMCID: PMC10792226 DOI: 10.3767/persoonia.2022.49.08] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Accepted: 10/19/2022] [Indexed: 12/24/2022]
Abstract
Novel species of fungi described in this study include those from various countries as follows: Argentina, Colletotrichum araujiae on leaves, stems and fruits of Araujia hortorum. Australia, Agaricus pateritonsus on soil, Curvularia fraserae on dying leaf of Bothriochloa insculpta, Curvularia millisiae from yellowing leaf tips of Cyperus aromaticus, Marasmius brunneolorobustus on well-rotted wood, Nigrospora cooperae from necrotic leaf of Heteropogon contortus, Penicillium tealii from the body of a dead spider, Pseudocercospora robertsiorum from leaf spots of Senna tora, Talaromyces atkinsoniae from gills of Marasmius crinis-equi and Zasmidium pearceae from leaf spots of Smilaxglyciphylla. Brazil, Preussia bezerrensis from air. Chile, Paraconiothyrium kelleni from the rhizosphere of Fragaria chiloensis subsp. chiloensis f. chiloensis. Finland, Inocybe udicola on soil in mixed forest with Betula pendula, Populus tremula, Picea abies and Alnus incana. France, Myrmecridium normannianum on dead culm of unidentified Poaceae. Germany, Vexillomyces fraxinicola from symptomless stem wood of Fraxinus excelsior. India, Diaporthe limoniae on infected fruit of Limonia acidissima, Didymella naikii on leaves of Cajanus cajan, and Fulvifomes mangroviensis on basal trunk of Aegiceras corniculatum. Indonesia, Penicillium ezekielii from Zea mays kernels. Namibia, Neocamarosporium calicoremae and Neocladosporium calicoremae on stems of Calicorema capitata, and Pleiochaeta adenolobi on symptomatic leaves of Adenolobus pechuelii. Netherlands, Chalara pteridii on stems of Pteridium aquilinum, Neomackenziella juncicola (incl. Neomackenziella gen. nov.) and Sporidesmiella junci from dead culms of Juncus effusus. Pakistan, Inocybe longistipitata on soil in a Quercus forest. Poland, Phytophthora viadrina from rhizosphere soil of Quercus robur, and Septoria krystynae on leaf spots of Viscum album. Portugal (Azores), Acrogenospora stellata on dead wood or bark. South Africa, Phyllactinia greyiae on leaves of Greyia sutherlandii and Punctelia anae on bark of Vachellia karroo. Spain, Anteaglonium lusitanicum on decaying wood of Prunus lusitanica subsp. lusitanica, Hawksworthiomyces riparius from fluvial sediments, Lophiostoma carabassense endophytic in roots of Limbarda crithmoides, and Tuber mohedanoi from calcareus soils. Spain (Canary Islands), Mycena laurisilvae on stumps and woody debris. Sweden, Elaphomyces geminus from soil under Quercus robur. Thailand, Lactifluus chiangraiensis on soil under Pinus merkusii, Lactifluus nakhonphanomensis and Xerocomus sisongkhramensis on soil under Dipterocarpus trees. Ukraine, Valsonectria robiniae on dead twigs of Robinia hispida. USA, Spiralomyces americanus (incl. Spiralomyces gen. nov.) from office air. Morphological and culture characteristics are supported by DNA barcodes. Citation: Tan YP, Bishop-Hurley SL, Shivas RG, et al. 2022. Fungal Planet description sheets: 1436-1477. Persoonia 49: 261-350. https://doi.org/10.3767/persoonia.2022.49.08.
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Affiliation(s)
- Y P Tan
- Queensland Plant Pathology Herbarium, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
- Centre for Crop Health, University of Southern Queensland, Toowoomba 4350, Queensland, Australia
| | - S L Bishop-Hurley
- Queensland Plant Pathology Herbarium, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
| | - R G Shivas
- Centre for Crop Health, University of Southern Queensland, Toowoomba 4350, Queensland, Australia
| | - D A Cowan
- Centre for Microbial Ecology and Genomics, Department of Biochemistry, Genetics and Microbiology, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa
| | | | - S S N Maharachchikumbura
- School of Life Sciences and Technology, Centre for Informational Biology, University of Electronic Science and Technology of China, Chengdu 611 731, P.R. China
| | - U Pinruan
- Plant Microbe Interaction Research Team (APMT), Integrative Crop Biotechnology and Management Research Group (ACBG), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani, Thailand
| | - K L Bransgrove
- Agri-Science Queensland, Department of Agriculture and Fisheries, Mareeba 4880, Queensland, Australia
| | | | - E Larsson
- Biological and Environmental Sciences, University of Gothenburg, and Gothenburg Global Biodiversity Centre, Box 461, SE40530 Göteborg, Sweden
| | - T Lebel
- State Herbarium of South Australia, Department for Environment and Water, Hackney Road, Adelaide 5000, South Australia
| | - S Mahadevakumar
- Forest Pathology Department, Division of Forest Protection, KSCSTE-Kerala Forest Research Institute, Peechi - 680 653, Thrissur, Kerala, India
| | - A Mateos
- Sociedad Micológica Extremeña, C/ Sagitario 14, 10001 Cáceres, Spain
| | - E R Osieck
- Jkvr. C.M. van Asch van Wijcklaan 19, 3972 ST Driebergen-Rijsenburg, The Netherlands
| | | | - S Sommai
- Plant Microbe Interaction Research Team (APMT), Integrative Crop Biotechnology and Management Research Group (ACBG), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani, Thailand
| | - K Ajithkumar
- Department of Plant Pathology, Main Agricultural Research Station, University of Agricultural Sciences, Raichur, Karnataka, India
| | - A Akulov
- Department of Mycology and Plant Resistance, V. N. Karazin Kharkiv National University, Maidan Svobody 4, 61022 Kharkiv, Ukraine
| | - F E Anderson
- CERZOS-UNS-CONICET, Camino La Carrindanga Km 7, 8000 Bahía Blanca, Argentina
| | - F Arenas
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - S Balashov
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - Á Bañares
- Departamento de Botánica, Ecología y Fisiología Vegetal, Universidad de La Laguna, Apdo. 456, E-38200 La Laguna, Tenerife, Islas Canarias
| | - D K Berger
- Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - M V Bianchinotti
- CERZOS-UNS-CONICET, Camino La Carrindanga Km 7, 8000 Bahía Blanca, Argentina
- Depto. de Biología, Bioquímica y Farmacia, UNS, San Juan 670, 8000 Bahía Blanca, Argentina
| | - S Bien
- Sect. Mycology and Complex Diseases, Dept. Forest Protection, Northwest German Forest Research Institute (NW-FVA), Grätzelstr. 2, 37079 Göttingen, Germany
| | - P Bilański
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, Poland
| | - A-G Boxshall
- School of Biosciences, University of Melbourne, Victoria, Australia
| | - M Bradshaw
- Harvard University, Department of Organismic and Evolutionary Biology, 22 Divinity Avenue, Cambridge, MA 02138, USA
| | | | - F J S Calaça
- Laboratory of Basic, Applied Mycology and Scientific Dissemination (FungiLab), State University of Goiás, Anápolis, Goiás, Brazil
| | - C Campos-Quiroz
- Instituto de Investigaciones Agropecuarias (INIA), Av. Vicente Méndez 515, Chillán, Ñuble, Chile
| | - J Carrasco-Fernández
- Instituto de Investigaciones Agropecuarias (INIA), Av. Vicente Méndez 515, Chillán, Ñuble, Chile
| | - J F Castro
- Instituto de Investigaciones Agropecuarias (INIA), Av. Vicente Méndez 515, Chillán, Ñuble, Chile
| | - S Chaimongkol
- Plant Microbe Interaction Research Team (APMT), Integrative Crop Biotechnology and Management Research Group (ACBG), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani, Thailand
- Department of Biology, Faculty of Science, King Mongkut's Institute of Technology Ladkrabang, Ladkrabang, Bangkok, Thailand
| | - S Chandranayaka
- Department of Studies in Biotechnology, University of Mysore, Manasagangotri, Mysore 570006, Karnataka, India
| | - Y Chen
- School of Life Sciences and Technology, Centre for Informational Biology, University of Electronic Science and Technology of China, Chengdu 611 731, P.R. China
| | - D Comben
- Biosecurity Queensland, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
| | - J D W Dearnaley
- School of Agriculture and Environmental Science, Faculty of Health, Engineering and Science, University of Southern Queensland, Toowoomba 4350, Queensland, Australia
| | - A S Ferreira-Sá
- Laboratory of Basic, Applied Mycology and Scientific Dissemination (FungiLab), State University of Goiás, Anápolis, Goiás, Brazil
| | - K Dhileepan
- Biosecurity Queensland, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
| | - M L Díaz
- CERZOS-UNS-CONICET, Camino La Carrindanga Km 7, 8000 Bahía Blanca, Argentina
- Depto. de Biología, Bioquímica y Farmacia, UNS, San Juan 670, 8000 Bahía Blanca, Argentina
| | - P K Divakar
- Department of Pharmacology, Pharmacognosy and Botany (DU Botany), Faculty of Pharmacy, Plaza de Ramón y Cajal s/n, Universidad Complutense, 28040 Madrid, Spain
| | - S Xavier-Santos
- Laboratory of Basic, Applied Mycology and Scientific Dissemination (FungiLab), State University of Goiás, Anápolis, Goiás, Brazil
| | - A Fernández-Bravo
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili, Sant Llorenç 21, 43201 Reus, Spain
| | - J Gené
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili, Sant Llorenç 21, 43201 Reus, Spain
| | | | - M Guerra
- Instituto de Investigaciones Agropecuarias (INIA), Av. Vicente Méndez 515, Chillán, Ñuble, Chile
| | - S Gunaseelan
- Centre for Advanced Studies in Botany, University of Madras, Chennai, Tamil Nadu, India
| | - J Houbraken
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - K Janik-Superson
- Department of Invertebrate Zoology & Hydrobiology, University of Lodz, Banacha 12/16, 90-237 Lodz, Poland
| | - R Jankowiak
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, Poland
| | - M Jeppson
- Biological and Environmental Sciences, University of Gothenburg, and Gothenburg Global Biodiversity Centre, Box 461, SE40530 Göteborg, Sweden
| | - Ž Jurjević
- EMSL Analytical, Inc., 200 Route 130 North, Cinnaminson, NJ 08077 USA
| | - M Kaliyaperumal
- Centre for Advanced Studies in Botany, University of Madras, Chennai, Tamil Nadu, India
| | - L A Kelly
- Agri-Science Queensland, Department of Agriculture and Fisheries, Mareeba 4880, Queensland, Australia
| | - K Kezo
- Centre for Advanced Studies in Botany, University of Madras, Chennai, Tamil Nadu, India
| | - A N Khalid
- Institute of Botany, University of the Punjab, Quaid-e-Azam Campus-54590, Lahore, Pakistan
| | - P Khamsuntorn
- Plant Microbe Interaction Research Team (APMT), Integrative Crop Biotechnology and Management Research Group (ACBG), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani, Thailand
| | - D Kidanemariam
- Department of Plant and Soil Sciences, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - M Kiran
- Department of Botany, Division of Science & Technology, University of Education, Lahore, Pakistan
| | - E Lacey
- Microbial Screening Technologies, 28 Percival Rd, Smithfield, New South Wales 2164, Australia
| | - G J Langer
- Sect. Mycology and Complex Diseases, Dept. Forest Protection, Northwest German Forest Research Institute (NW-FVA), Grätzelstr. 2, 37079 Göttingen, Germany
| | - L V López-Llorca
- Department of Marine Sciences and Applied Biology, Laboratory of Plant Pathology, University of Alicante, 03690 Alicante, Spain
- Laboratory of Plant Pathology, Multidisciplinary Institute for Environmental Studies (MIES) Ramón Margalef, University of Alicante, 03690 Alicante, Spain
| | - J J Luangsa-Ard
- Plant Microbe Interaction Research Team (APMT), Integrative Crop Biotechnology and Management Research Group (ACBG), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani, Thailand
| | - P Lueangjaroenkit
- Department of Microbiology, Faculty of Science, Kasetsart University, Bangkok, Thailand
- Biodiversity Center, Kasetsart University (BDCKU), Bangkok, Thailand
| | - H T Lumbsch
- The Field Museum of Natural History, Science & Education, 1400 S. Lake Shore Drive, Chicago, IL 60605, USA
| | - J G Maciá-Vicente
- Plant Ecology and Nature Conservation, Wageningen University & Research, P.O. Box 47, 6700 AA Wageningen, The Netherlands
- Department of Microbial Ecology, Netherlands Institute for Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB Wageningen, The Netherlands
| | - L S Mamatha Bhanu
- Department of Biotechnology, Yuvaraja's College, University of Mysore, Mysuru - 570005, Karnataka, India
| | - T S Marney
- Queensland Plant Pathology Herbarium, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
| | - J E Marqués-Gálvez
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - A Morte
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - A Naseer
- Institute of Botany, University of the Punjab, Quaid-e-Azam Campus-54590, Lahore, Pakistan
| | - A Navarro-Ródenas
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | - O Oyedele
- Babcock University, Ilishan remo, Ogun State, Nigeria
| | - S Peters
- Sect. Mycology and Complex Diseases, Dept. Forest Protection, Northwest German Forest Research Institute (NW-FVA), Grätzelstr. 2, 37079 Göttingen, Germany
| | - S Piskorski
- Department of Algology and Mycology, University of Lodz, Banacha 12/16, 90-237 Lodz, Poland
| | - L Quijada
- Harvard University Herbaria, 20 Divinity Avenue, Cambridge, MA 02138, USA
| | - G H Ramírez
- CERZOS-UNS-CONICET, Camino La Carrindanga Km 7, 8000 Bahía Blanca, Argentina
- Departamento de Agronomía, UNS, San Andrés 612, 8000 Bahía Blanca, Argentina
| | - K Raja
- Centre for Advanced Studies in Botany, University of Madras, Chennai, Tamil Nadu, India
| | - A Razzaq
- Institute of Botany, University of the Punjab, Quaid-e-Azam Campus-54590, Lahore, Pakistan
| | - V J Rico
- Department of Pharmacology, Pharmacognosy and Botany (DU Botany), Faculty of Pharmacy, Plaza de Ramón y Cajal s/n, Universidad Complutense, 28040 Madrid, Spain
| | - A Rodríguez
- Departamento de Biología Vegetal (Botánica), Facultad de Biología, Universidad de Murcia, 30100 Murcia, Spain
| | | | - R M Sánchez
- CERZOS-UNS-CONICET, Camino La Carrindanga Km 7, 8000 Bahía Blanca, Argentina
- Depto. de Biología, Bioquímica y Farmacia, UNS, San Juan 670, 8000 Bahía Blanca, Argentina
| | - C Santelices
- Instituto de Investigaciones Agropecuarias (INIA), Av. Vicente Méndez 515, Chillán, Ñuble, Chile
| | - A S Savitha
- Department of Plant Pathology, College of Agriculture, University of Agricultural Sciences, Raichur, Karnataka, India
| | - M Serrano
- University of Santiago de Compostela, 27002 Lugo, Spain
| | - L Leonardo-Silva
- Laboratory of Basic, Applied Mycology and Scientific Dissemination (FungiLab), State University of Goiás, Anápolis, Goiás, Brazil
| | - H Solheim
- Norwegian Institute of Bioeconomy Research, P.O. Box 115, 1431 As, Norway
| | - S Somrithipol
- Plant Microbe Interaction Research Team (APMT), Integrative Crop Biotechnology and Management Research Group (ACBG), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani, Thailand
| | - M Y Sreenivasa
- Department of Studies in Microbiology, University of Mysore, Manasagangotri, Mysuru-570 006, Karnataka, India
| | - H Stępniewska
- Department of Forest Ecosystems Protection, University of Agriculture in Krakow, Al. 29 Listopada 46, 31-425 Krakow, Poland
| | - D Strapagiel
- Biobank Lab, Department of Molecular Biophysics, University of Lodz, Pomorska 139, 90-235 Lodz, Poland
| | - T Taylor
- Biosecurity Queensland, Department of Agriculture and Fisheries, Dutton Park 4102, Queensland, Australia
| | - D Torres-Garcia
- Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili, Sant Llorenç 21, 43201 Reus, Spain
| | - J Vauras
- Biological Collections of Åbo Akademi University, Biodiversity Unit, Herbarium, FI-20014 University of Turku, Finland
| | - M Villarreal
- Departamento Ciencias de la Vida (Botánica), Facultad de Ciencias, Universidad de Alcalá, 28805, Alcalá de Henares, Madrid, Spain
| | - C M Visagie
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
| | - M Wołkowycki
- Institute of Forest Sciences, Bialystok University of Technology, Wiejska 45E, 15-351 Bialystok, Poland
| | - W Yingkunchao
- Plant Microbe Interaction Research Team (APMT), Integrative Crop Biotechnology and Management Research Group (ACBG), National Center for Genetic Engineering and Biotechnology (BIOTEC), 113 Thailand Science Park, Phahonyothin Road, Khlong Nueng, Khlong Luang, Pathum Thani, Thailand
- Department of Biology, Faculty of Science, King Mongkut's Institute of Technology Ladkrabang, Ladkrabang, Bangkok, Thailand
| | - E Zapora
- Institute of Forest Sciences, Bialystok University of Technology, Wiejska 45E, 15-351 Bialystok, Poland
| | - J Z Groenewald
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - P W Crous
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
- Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa
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11
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Xu XL, Wang FH, Liu C, Yang HB, Zeng Z, Wang BX, Liu YG, Yang CL. Morphology and phylogeny of ascomycetes associated with walnut trees ( Juglans regia) in Sichuan province, China. Front Microbiol 2022; 13:1016548. [PMID: 36338097 PMCID: PMC9632355 DOI: 10.3389/fmicb.2022.1016548] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2022] [Accepted: 09/20/2022] [Indexed: 01/28/2023] Open
Abstract
In Sichuan province, walnuts, consisting of Juglans regia, Juglans sigillata, and the hybrid J. regia × J. sigillata, are commercially important edible nuts, and J. regia is the most widespread plant. To date, the diversity and distribution of fungi inhabiting on Juglans have not received enough attention, although there have been studies focusing on pathogens from fruit and stem. In order to update the checklist of fungi associated with Sichuan walnuts, a survey on fungi associated with the three Juglans species from 15 representative regions in Sichuan was conducted. In this article, ten fungi distributed in two classes of Ascomycota (Dothideomycetes and Sordariomycetes) were described based on morpho-molecular analyses, and two novel species, Neofusicoccum sichuanense and Sphaerulina juglandina, a known species of Ophiognomonia leptostyla, and seven new hosts or geographical records of Cladosporium tenuissimum, Diatrypella vulgaris, Helminthosporium juglandinum, Helminthosporium velutinum, Loculosulcatispora hongheensis, Periconia byssoides, and Rhytidhysteron subrufulum were included. Morphological descriptions and illustrations of these fungi are provided.
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Affiliation(s)
- Xiu-Lan Xu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River and Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, China,Forestry Research Institute, Chengdu Academy of Agricultural and Forestry Sciences, Chengdu, Sichuan, China
| | - Fei-Hu Wang
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River and Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Chao Liu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River and Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Han-Bo Yang
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River and Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Zhen Zeng
- Forestry Research Institute, Chengdu Academy of Agricultural and Forestry Sciences, Chengdu, Sichuan, China,*Correspondence: Zhen Zeng,
| | - Bao-Xin Wang
- Forestry Research Institute, Chengdu Academy of Agricultural and Forestry Sciences, Chengdu, Sichuan, China
| | - Ying-Gao Liu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River and Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, China
| | - Chun-Lin Yang
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River and Forestry Ecological Engineering in the Upper Reaches of the Yangtze River Key Laboratory of Sichuan Province, College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan, China,Chun-Lin Yang,
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12
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Mapook A, Hyde KD, Hassan K, Kemkuignou BM, Čmoková A, Surup F, Kuhnert E, Paomephan P, Cheng T, de Hoog S, Song Y, Jayawardena RS, Al-Hatmi AMS, Mahmoudi T, Ponts N, Studt-Reinhold L, Richard-Forget F, Chethana KWT, Harishchandra DL, Mortimer PE, Li H, Lumyong S, Aiduang W, Kumla J, Suwannarach N, Bhunjun CS, Yu FM, Zhao Q, Schaefer D, Stadler M. Ten decadal advances in fungal biology leading towards human well-being. FUNGAL DIVERS 2022; 116:547-614. [PMID: 36123995 PMCID: PMC9476466 DOI: 10.1007/s13225-022-00510-3] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2022] [Accepted: 07/28/2022] [Indexed: 11/04/2022]
Abstract
Fungi are an understudied resource possessing huge potential for developing products that can greatly improve human well-being. In the current paper, we highlight some important discoveries and developments in applied mycology and interdisciplinary Life Science research. These examples concern recently introduced drugs for the treatment of infections and neurological diseases; application of -OMICS techniques and genetic tools in medical mycology and the regulation of mycotoxin production; as well as some highlights of mushroom cultivaton in Asia. Examples for new diagnostic tools in medical mycology and the exploitation of new candidates for therapeutic drugs, are also given. In addition, two entries illustrating the latest developments in the use of fungi for biodegradation and fungal biomaterial production are provided. Some other areas where there have been and/or will be significant developments are also included. It is our hope that this paper will help realise the importance of fungi as a potential industrial resource and see the next two decades bring forward many new fungal and fungus-derived products.
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Affiliation(s)
- Ausana Mapook
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
- Innovative Institute of Plant Health, Zhongkai University of Agriculture and Engineering, Haizhu District, Guangzhou, 510225 China
| | - Khadija Hassan
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
| | - Blondelle Matio Kemkuignou
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
| | - Adéla Čmoková
- Laboratory of Fungal Genetics and Metabolism, Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic
| | - Frank Surup
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
- Institute of Microbiology, Technische Universität Braunschweig, Spielmannstraße 7, 38106 Brunswick, Germany
| | - Eric Kuhnert
- Centre of Biomolecular Drug Research (BMWZ), Institute for Organic Chemistry, Leibniz University Hannover, Schneiderberg 38, 30167 Hannover, Germany
| | - Pathompong Paomephan
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
- Department of Biotechnology, Faculty of Science, Mahidol University, 272 Rama VI Road, Ratchathewi, Bangkok, 10400 Thailand
| | - Tian Cheng
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
- Laboratory of Fungal Genetics and Metabolism, Institute of Microbiology, Czech Academy of Sciences, Prague, Czech Republic
| | - Sybren de Hoog
- Center of Expertise in Mycology, Radboud University Medical Center / Canisius Wilhelmina Hospital, Nijmegen, The Netherlands
- Key Laboratory of Environmental Pollution Monitoring and Disease Control, Guizhou Medical University, Guiyang, China
- Microbiology, Parasitology and Pathology Graduate Program, Federal University of Paraná, Curitiba, Brazil
| | - Yinggai Song
- Department of Dermatology, Peking University First Hospital, Peking University, Beijing, China
| | - Ruvishika S. Jayawardena
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Abdullah M. S. Al-Hatmi
- Center of Expertise in Mycology, Radboud University Medical Center / Canisius Wilhelmina Hospital, Nijmegen, The Netherlands
- Natural and Medical Sciences Research Center, University of Nizwa, Nizwa, Oman
| | - Tokameh Mahmoudi
- Department of Biochemistry, Erasmus University Medical Center, Rotterdam, The Netherlands
| | - Nadia Ponts
- INRAE, UR1264 Mycology and Food Safety (MycSA), 33882 Villenave d’Ornon, France
| | - Lena Studt-Reinhold
- Department of Applied Genetics and Cell Biology, Institute of Microbial Genetics, University of Natural Resources and Life Sciences, Vienna (BOKU), Tulln an der Donau, Austria
| | | | - K. W. Thilini Chethana
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Dulanjalee L. Harishchandra
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, 100097 China
| | - Peter E. Mortimer
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
- Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201 Yunnan China
| | - Huili Li
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
- Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201 Yunnan China
| | - Saisamorm Lumyong
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
- Academy of Science, The Royal Society of Thailand, Bangkok, 10300 Thailand
| | - Worawoot Aiduang
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Jaturong Kumla
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Nakarin Suwannarach
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, 50200 Thailand
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200 Thailand
| | - Chitrabhanu S. Bhunjun
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
| | - Feng-Ming Yu
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, 57100 Thailand
- Yunnan Key Laboratory of Fungal Diversity and Green Development, Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
| | - Qi Zhao
- Yunnan Key Laboratory of Fungal Diversity and Green Development, Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201 Yunnan China
| | - Doug Schaefer
- Centre for Mountain Futures (CMF), Kunming Institute of Botany, Chinese Academy of Science, Kunming, 650201 Yunnan China
| | - Marc Stadler
- Department Microbial Drugs, Helmholtz Centre for Infection Research (HZI), and German Centre for Infection Research (DZIF), Partner Site Hannover-Braunschweig, Inhoffenstrasse 7, 38124 Brunswick, Germany
- Institute of Microbiology, Technische Universität Braunschweig, Spielmannstraße 7, 38106 Brunswick, Germany
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13
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Pyrenochaeta fraxinina as colonizer of ash and sycamore petioles, its morphology, ecology, and phylogenetic connections. Mycol Prog 2022. [DOI: 10.1007/s11557-022-01827-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/15/2022]
Abstract
AbstractPyrenochaeta fraxinina was first described in 1913 from the state of New York (USA) on petioles of Fraxinus sp. Since then, the species has not been reported from North America and reports from the other regions of the world are very sparse. The results of this study on P. fraxinina are based on the material collected in various regions of Poland from 2012 to 2019. The material comprised 2700 previous year’s leaf petioles of Fraxinus excelsior and 1970 petioles or leaf residues of eight other deciduous tree species. As a result, the occurrence of pycnidial conidiomata of P. fraxinina was confirmed on F. excelsior (3.4% of petioles), F. mandshurica (1.5%), F. pennsylvanica (3.2%), and Acer pseudoplatanus (2.0%). The morphology of the microstructures was described based on the fresh material and compared with the holotype of P. fraxinina. The optimal temperature for the growth of the fungus in vitro was estimated as 20 °C. The analyses based on ITS-LSU rDNA sequences and a protein coding sequence of TUB2 and RPB2 genes showed that P. fraxinina isolates form a well-supported clade in the phylogenetic trees. The species proved to be closely related to Nematostoma parasiticum (asexual morph Pyrenochaeta parasitica), a species occurring on Abies alba in connection with needle browning disease. Interactions between P. fraxinina and the ash dieback pathogen, Hymenoscyphus fraxineus, were analyzed in vivo on ash petioles and in vitro in dual cultures. Among 93 petioles of F. excelsior, for which P. fraxinina conidiomata were detected, 26 were also colonized by H. fraxineus. Mostly, these two fungi occurred separately, colonizing different sections of a petiole. For all dual cultures, both fungi, P. fraxinina and H. fraxineus, showed growth inhibition toward the counterpartner. The role of P. fraxinina as a saprotrophic competitor toward H. fraxineus in ash petioles is discussed.
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Borzęcka J, Suchodolski J, Dudek B, Matyaszczyk L, Spychała K, Ogórek R. The First Comprehensive Biodiversity Study of Culturable Fungal Communities Inhabiting Cryoconite Holes in the Werenskiold Glacier on Spitsbergen (Svalbard Archipelago, Arctic). BIOLOGY 2022; 11:1224. [PMID: 36009851 PMCID: PMC9405543 DOI: 10.3390/biology11081224] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 08/13/2022] [Accepted: 08/15/2022] [Indexed: 11/17/2022]
Abstract
Cryoconite holes on glacier surfaces are a source of cold-adapted microorganisms, but little is known about their fungal inhabitants. Here, we provide the first report of distinctive fungal communities in cryoconite holes in the Werenskiold Glacier on Spitsbergen (Svalbard Archipelago, Arctic). Due to a combination of two incubation temperatures (7 °C and 24 ± 0.5 °C) and two media during isolation (PDA, YPG), as well as classical and molecular identification approaches, we were able to identify 23 different fungi (21 species and 2 unassigned species). Most of the fungi cultured from cryoconite sediment were ascomycetous filamentous micromycetes. However, four representatives of macromycetes were also identified (Bjerkandera adusta, Holwaya mucida, Orbiliaceae sp., and Trametes versicolor). Some of the described fungi possess biotechnological potential (Aspergillus pseudoglaucus, A. sydowii, Penicillium expansum, P. velutinum, B. adusta, and T. versicolor), thus, we propose the Arctic region as a source of new strains for industrial applications. In addition, two phytopathogenic representatives were present (P. sumatraense, Botrytis cinerea), as well as one potentially harmful to humans (Cladosporium cladosporioides). To the best of our knowledge, we are the first to report the occurrence of A. pseudoglaucus, C. allicinum, C. ramotenellum, P. sumatraense, P. velutinum, P. cumulodentata, B. adusta, and T. versicolor in polar regions. In all likelihood, two unassigned fungus species (Orbiliaceae and Dothideomycetes spp.) might also be newly described in such environments. Additionally, due to experimenting with 10 sampling sites located at different latitudes, we were able to conclude that the number of fungal spores decreases as one moves down the glacier. Considering the prevalence and endangerment of glacial environments worldwide, such findings suggest their potential as reservoirs of fungal diversity, which should not be overlooked.
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Affiliation(s)
- Justyna Borzęcka
- Department of Mycology and Genetics, University of Wrocław, Przybyszewskiego Street 63-77, 51-148 Wrocław, Poland
| | - Jakub Suchodolski
- Department of Mycology and Genetics, University of Wrocław, Przybyszewskiego Street 63-77, 51-148 Wrocław, Poland
| | - Bartłomiej Dudek
- Department of Microbiology, University of Wrocław, Przybyszewskiego Street 63-77, 51-148 Wrocław, Poland
| | - Lena Matyaszczyk
- Department of Mycology and Genetics, University of Wrocław, Przybyszewskiego Street 63-77, 51-148 Wrocław, Poland
| | - Klaudyna Spychała
- Department of Mycology and Genetics, University of Wrocław, Przybyszewskiego Street 63-77, 51-148 Wrocław, Poland
| | - Rafał Ogórek
- Department of Mycology and Genetics, University of Wrocław, Przybyszewskiego Street 63-77, 51-148 Wrocław, Poland
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15
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Xu XL, Xiao QG, Yang CL, Jeewon R, Liu YG. Multigene Phylogenetic Support for Novel Rhytidhysteron Speg. Species (Hysteriaceae) from Sichuan Province, China. CRYPTOGAMIE MYCOL 2022. [DOI: 10.5252/cryptogamie-mycologie2022v43a3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Xiu-Lan Xu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Sichuan Agricultural University, Chengdu, Sichuan 611130 (China) and Forestry Research Ins
| | - Qian-Gang Xiao
- Forestry Research Institute, Chengdu Academy of Agricultural and Forestry Sciences, Chengdu, Sichuan 611130 (China)
| | - Chun-Lin Yang
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Sichuan Agricultural University, Chengdu, Sichuan 611130 (China)
| | - Rajesh Jeewon
- Department of Health Sciences, Faculty of Medicine and Health Sciences, University of Mauritius, Reduit, 80837 (Mauritius)
| | - Ying-Gao Liu
- National Forestry and Grassland Administration Key Laboratory of Forest Resources Conservation and Ecological Safety on the Upper Reaches of the Yangtze River, Sichuan Agricultural University, Chengdu, Sichuan 611130 (China)
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Xu R, Su W, Tian S, Bhunjun CS, Tibpromma S, Hyde KD, Li Y, Phukhamsakda C. Synopsis of Leptosphaeriaceae and Introduction of Three New Taxa and One New Record from China. J Fungi (Basel) 2022; 8:416. [PMID: 35628672 PMCID: PMC9146790 DOI: 10.3390/jof8050416] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2022] [Revised: 04/09/2022] [Accepted: 04/13/2022] [Indexed: 12/04/2022] Open
Abstract
Leptosphaeriaceae, a diverse family in the order Pleosporales, is remarkable for its scleroplectenchymatous or plectenchymatous peridium cells. Four Leptosphaeriaceae species were discovered and studied during the investigation of saprobic fungi from plant substrates in China. Novel taxa were defined using multiloci phylogenetic analyses and are supported by morphology. Based on maximum likelihood (ML) and Bayesian inference (BI) analyses, these isolates represent three novel taxa and one new record within Leptosphaeriaceae. A new genus, Angularia, is introduced to accommodate Angularia xanthoceratis, with a synopsis chart for 15 genera in Leptosphaeriaceae. This study also revealed a new species, Plenodomus changchunensis, and a new record of Alternariaster centaureae-diffusae. These species add to the increasing number of fungi known from China.
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Affiliation(s)
- Rong Xu
- Internationally Cooperative Research Center of China for New Germplasm Breeding of Edible Mushroom, Jilin Agricultural University, Changchun 130118, China; (R.X.); (W.S.); (S.T.)
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China
| | - Wenxin Su
- Internationally Cooperative Research Center of China for New Germplasm Breeding of Edible Mushroom, Jilin Agricultural University, Changchun 130118, China; (R.X.); (W.S.); (S.T.)
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China
| | - Shangqing Tian
- Internationally Cooperative Research Center of China for New Germplasm Breeding of Edible Mushroom, Jilin Agricultural University, Changchun 130118, China; (R.X.); (W.S.); (S.T.)
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China
| | - Chitrabhanu S. Bhunjun
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand; (C.S.B.); (K.D.H.)
- School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Saowaluck Tibpromma
- The Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing 655011, China;
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand; (C.S.B.); (K.D.H.)
- China Innovative Institute for Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou 510225, China
- Jiaxing Key Laboratory for New Germplasm Breeding of Economic Mycology, Jiaxing 314000, China
| | - Yu Li
- Internationally Cooperative Research Center of China for New Germplasm Breeding of Edible Mushroom, Jilin Agricultural University, Changchun 130118, China; (R.X.); (W.S.); (S.T.)
| | - Chayanard Phukhamsakda
- Internationally Cooperative Research Center of China for New Germplasm Breeding of Edible Mushroom, Jilin Agricultural University, Changchun 130118, China; (R.X.); (W.S.); (S.T.)
- College of Plant Protection, Jilin Agricultural University, Changchun 130118, China
- Jiaxing Key Laboratory for New Germplasm Breeding of Economic Mycology, Jiaxing 314000, China
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17
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Shen HW, Bao DF, Bhat DJ, Su HY, Luo ZL. Lignicolous freshwater fungi in Yunnan Province, China: an overview. Mycology 2022; 13:119-132. [PMID: 35711328 PMCID: PMC9196657 DOI: 10.1080/21501203.2022.2058638] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Abstract
Yunnan Province is one of the rich biodiversity hotspots with abundant resources of lignicolous freshwater fungi. A total of 281 species of lignicolous freshwater fungi from 1986 to the present in Yunnan Province. They are mostly distributed in the classes Dothideomycetes and Sordariomycetes, a few species in the Eurotiomycetes and Leotiomycetes, and rarely reported in Orbiliomycetes and Pezizomycetes. Lignicolous freshwater fungi can decompose lignocellulose substrates and release energy and nutrients, and thus playing an important role in freshwater environment. This study briefly reviewed the biodiversity and taxonomic status of lignicolous freshwater fungi in Yunnan, the ecological functions of lignicolous freshwater fungi, factors affecting community distribution, application status, and research difficulties.
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Affiliation(s)
- Hong-Wei Shen
- College of Agriculture and Biological Sciences, Dali University,Dali, Yunnan province, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- School of Science, Mae Fah Luang University, Chiang Rai, Thailand
| | - Dan-Feng Bao
- College of Agriculture and Biological Sciences, Dali University,Dali, Yunnan province, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
| | | | - Hong-Yan Su
- College of Agriculture and Biological Sciences, Dali University,Dali, Yunnan province, China
| | - Zong-Long Luo
- College of Agriculture and Biological Sciences, Dali University,Dali, Yunnan province, China
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19
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Forecasting the number of species of asexually reproducing fungi (Ascomycota and Basidiomycota). FUNGAL DIVERS 2022. [DOI: 10.1007/s13225-022-00500-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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20
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Current Insight into Traditional and Modern Methods in Fungal Diversity Estimates. J Fungi (Basel) 2022; 8:jof8030226. [PMID: 35330228 PMCID: PMC8955040 DOI: 10.3390/jof8030226] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2022] [Revised: 02/19/2022] [Accepted: 02/20/2022] [Indexed: 12/04/2022] Open
Abstract
Fungi are an important and diverse component in various ecosystems. The methods to identify different fungi are an important step in any mycological study. Classical methods of fungal identification, which rely mainly on morphological characteristics and modern use of DNA based molecular techniques, have proven to be very helpful to explore their taxonomic identity. In the present compilation, we provide detailed information on estimates of fungi provided by different mycologistsover time. Along with this, a comprehensive analysis of the importance of classical and molecular methods is also presented. In orderto understand the utility of genus and species specific markers in fungal identification, a polyphasic approach to investigate various fungi is also presented in this paper. An account of the study of various fungi based on culture-based and cultureindependent methods is also provided here to understand the development and significance of both approaches. The available information on classical and modern methods compiled in this study revealed that the DNA based molecular studies are still scant, and more studies are required to achieve the accurate estimation of fungi present on earth.
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21
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Sun YR, Liu NG, Hyde KD, Jayawardena RS, Wang Y. Pleocatenata chiangraiensis gen. et. sp. nov. (Pleosporales, Dothideomycetes) from medicinal plants in northern Thailand. MycoKeys 2022; 87:77-98. [PMID: 35210923 PMCID: PMC8857139 DOI: 10.3897/mycokeys.87.79433] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Accepted: 01/19/2022] [Indexed: 12/27/2022] Open
Abstract
Pleocatenata, a new genus, is introduced with its type species, Pleocatenatachiangraiensis, which was isolated from withered twigs of two medicinal plants, Clerodendrumquadriloculare (Blanco) Merr (Verbenaceae) and Tarennastellulata (Hook.f.) Ridl (Rubiaceae) in northern Thailand. The genus is characterized by mononematous, septate, brown or dark brown conidiophores, monotretic conidiogenous cells and catenate, obclavate, olivaceous to blackish brown conidia. Phylogenetic analysis of combined LSU, SSU, tef1-α, rpb2 and ITS sequence data showed Pleocatenata forms a distinct phylogenetic lineage in Pleosporales, Dothideomycetes. Therefore, we treat Pleocatenata as Pleosporales genera incertae sedis based on morphology and phylogenetic analyses. Descriptions and illustrations of the new taxa are provided, and it is compared with morphologically similar genera.
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22
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Qiao M, Zheng H, Guo JS, Castañeda-Ruiz RF, Xu JP, Peng J, Zhang KQ, Yu ZF. Two new asexual genera and six new asexual species in the family Microthyriaceae (Dothideomycetes, Ascomycota) from China. MycoKeys 2021; 85:1-30. [PMID: 34934384 PMCID: PMC8648689 DOI: 10.3897/mycokeys.85.70829] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Accepted: 11/09/2021] [Indexed: 12/04/2022] Open
Abstract
The family Microthyriaceae is represented by relatively few mycelial cultures and DNA sequences; as a result, the taxonomy and classification of this group of organisms remain poorly understood. During the investigation of the diversity of aquatic hyphomycetes from southern China, several isolates were collected. These isolates were cultured and sequenced and a BLAST search of its LSU sequences against data in GenBank revealed that the closest related taxa are in the genus Microthyrium. Phylogenetic analyses, based on the combined sequence data from the internal transcribed spacers (ITS) and the large subunit (LSU), revealed that these isolates represent eight new taxa in Microthyriaceae, including two new genera, Antidactylariagen. nov. and Isthmomycesgen. nov. and six new species, Antidactylariaminifimbriatasp. nov., Isthmomycesoxysporussp. nov., I.dissimilissp. nov., I.macrosporussp. nov., Triscelophorusanisopterioideussp. nov. and T.sinensissp. nov. These new taxa are described, illustrated for their morphologies and compared with similar taxa. In addition, two new combinations are proposed in this family.
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Affiliation(s)
- Min Qiao
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China
| | - Hua Zheng
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China.,School of Life Sciences, Yunnan University, Kunming, Yunnan, 650091, China
| | - Ji-Shu Guo
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China.,School of Life Sciences, Yunnan University, Kunming, Yunnan, 650091, China
| | - Rafael F Castañeda-Ruiz
- Instituto de Investigaciones Fundamentales en Agricultura Tropical "Alejandro de Humboldt" (INIFAT), 17200, La Habana, Cuba
| | - Jian-Ping Xu
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China.,Department of Biology, McMaster University, Hamilton, Ontario, L8S 4K1, Canada
| | - Jie Peng
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China.,School of Life Sciences, Yunnan University, Kunming, Yunnan, 650091, China
| | - Ke-Qin Zhang
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China
| | - Ze-Fen Yu
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China
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23
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A novel species of Aureobasidium (Dothioraceae) recovered from Acer pseudosieboldianum in Korea. JOURNAL OF ASIA-PACIFIC BIODIVERSITY 2021. [DOI: 10.1016/j.japb.2021.08.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022] Open
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24
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Thiyagaraja V, Lücking R, Ertz D, Samarakoon MC, Wanasinghe DN, Karunarathna SC, Cheewangkoon R, Hyde KD. Mendogiadiffusa sp. nov. and an updated key to the species of Mendogia (Myriangiaceae, Dothideomycetes). Biodivers Data J 2021; 9:e67705. [PMID: 34594152 PMCID: PMC8440402 DOI: 10.3897/bdj.9.e67705] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2021] [Accepted: 08/05/2021] [Indexed: 11/12/2022] Open
Abstract
Background Mendogia belongs to Dothideomycetes and its members are epiphytic on living bamboo culms or palms and distributed in tropical regions. Currently, the genus comprises seven species. Another collection resembling Mendogia was collected from the leaves of Fagales sp. in Thailand. Morphological characteristics and multilocus phylogenetic analyses, using ITS, LSU and SSU sequences, showed that the fungus is new to science, described herein as Mendogiadiffusa. Mendogiadiffusa is characterised by apothecial ascostromata, a carbonised epithecium, dark brown setae on the ascostromatal surface, hyaline paraphysoids, ovoid to clavate asci and oblong to elliptical, muriform ascospores. The fungus has a dark pigmented surface and is occasionally facultatively associated with patches of green algae, but not actually lichenised. Instead, the fungus penetrates the upper leaf surface, forming dark pigmented isodiametric cells below the epidermis. New information Re-examination of specimens of M.chiangraiensis, M.macrostroma and M.yunnanensis revealed the absence of algal associations. The status of Mendogiaphilippinensis (= M.calami) and M.bambusina (= Uleopeltisbambusina) was established, based on morphological comparisons and previous studies. Comprehensive morphological descriptions with phylogenetic analyses support M.diffusa as a novel species in Myriangiaceae. An updated key to the known species of the genus is also provided.
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Affiliation(s)
- Vinodhini Thiyagaraja
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University Chiang Mai 50200 Thailand.,Centre of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand Centre of Excellence in Fungal Research, Mae Fah Luang University Chiang Rai 57100 Thailand.,CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201 Yunnan China.,World Agro forestry Centre East and Central Asia, Kunming 650201, Yunnan, China World Agro forestry Centre East and Central Asia, Kunming 650201 Yunnan China
| | - Robert Lücking
- Botanischer Garten und Botanisches Museum, Freie Universität Berlin, Berlin, Germany Botanischer Garten und Botanisches Museum, Freie Universität Berlin Berlin Germany
| | - Damien Ertz
- Research Department, Meise Botanic Garden, Nieuwelaan 38, BE-1860, Meise, Belgium Research Department, Meise Botanic Garden, Nieuwelaan 38, BE-1860 Meise Belgium.,Fédération Wallonie-Bruxelles, Service Général de l'Enseignement Supérieur et de la Recherche Scientifique, Rue A. Lavallée 1, BE-1080, Bruxelles, Belgium Fédération Wallonie-Bruxelles, Service Général de l'Enseignement Supérieur et de la Recherche Scientifique, Rue A. Lavallée 1, BE-1080 Bruxelles Belgium
| | - Milan C Samarakoon
- Centre of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand Centre of Excellence in Fungal Research, Mae Fah Luang University Chiang Rai 57100 Thailand
| | - Dhanushka N Wanasinghe
- CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201 Yunnan China.,World Agro forestry Centre East and Central Asia, Kunming 650201, Yunnan, China World Agro forestry Centre East and Central Asia, Kunming 650201 Yunnan China
| | - Samantha C Karunarathna
- CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201 Yunnan China.,World Agro forestry Centre East and Central Asia, Kunming 650201, Yunnan, China World Agro forestry Centre East and Central Asia, Kunming 650201 Yunnan China
| | - Ratchadawan Cheewangkoon
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University Chiang Mai 50200 Thailand.,Innovative Agriculture Research Centre, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand Innovative Agriculture Research Centre, Faculty of Agriculture, Chiang Mai University Chiang Mai 50200 Thailand
| | - Kevin D Hyde
- World Agro forestry Centre East and Central Asia, Kunming 650201, Yunnan, China World Agro forestry Centre East and Central Asia, Kunming 650201 Yunnan China.,Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand Department of Biology, Faculty of Science, Chiang Mai University Chiang Mai 50200 Thailand.,Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai 50200, Thailand Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University Chiang Mai 50200 Thailand.,CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201 Yunnan China.,Centre of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand Centre of Excellence in Fungal Research, Mae Fah Luang University Chiang Rai 57100 Thailand
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25
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Current Insight into Culture-Dependent and Culture-Independent Methods in Discovering Ascomycetous Taxa. J Fungi (Basel) 2021; 7:jof7090703. [PMID: 34575741 PMCID: PMC8467358 DOI: 10.3390/jof7090703] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 08/22/2021] [Accepted: 08/23/2021] [Indexed: 01/08/2023] Open
Abstract
Culture techniques are vital in both traditional and modern fungal taxonomy. Establishing sexual-asexual links and synanamorphs, extracting DNA and secondary metabolites are mainly based on cultures. However, it is widely accepted that a large number of species are not sporulating in nature while others cannot be cultured. Recent ecological studies based on culture-independent methods revealed these unculturable taxa, i.e., dark taxa. Recent fungal diversity estimation studies suggested that environmental sequencing plays a vital role in discovering missing species. However, Sanger sequencing is still the main approach in determining DNA sequences in culturable species. In this paper, we summarize culture-based and culture-independent methods in the study of ascomycetous taxa. High-throughput sequencing of leaf endophytes, leaf litter fungi and fungi in aquatic environments is important to determine dark taxa. Nevertheless, currently, naming dark taxa is not recognized by the ICN, thus provisional naming of them is essential as suggested by several studies.
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Ren GC, Wanasinghe DN, Monkai J, Mortimer PE, Hyde KD, Xu JC, Pang A, Gui H. Novel saprobic Hermatomyces species (Hermatomycetaceae, Pleosporales) from China (Yunnan Province) and Thailand. MycoKeys 2021; 82:57-79. [PMID: 34408538 PMCID: PMC8367933 DOI: 10.3897/mycokeys.82.67973] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Accepted: 07/13/2021] [Indexed: 11/12/2022] Open
Abstract
During our survey of the diversity of woody litter fungi in China and Thailand, three Hermatomyces species were collected from dead woody twigs of Dipterocarpus sp. (Dipterocarpaceae) and Ehretiaacuminata (Boraginaceae). Both morphology and multigene analyses revealed two taxa as new species (Hermatomycesturbinatus and H.jinghaensis) and the remaining collections as new records of H.sphaericus. Hermatomycesturbinatus is characterized by 1) dimorphic conidia, having circular to oval lenticular conidia and 2) turbinate conidia consisting of two columns with two septa composed of 2–3 cells in each column. Hermatomycesjinghaensis is characterized by dimorphic conidia, having circular to oval lenticular conidia and clavate or subcylindrical to cylindrical conidia and consisting of one or two columns with 6–8 cells in each column. Phylogenetic analyses of combined LSU, ITS, tub2, tef1-α and rpb2 sequence data supports the placement of these new taxa within Hermatomycetaceae with high statistical support.
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Affiliation(s)
- Guang-Cong Ren
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand.,School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand.,Guiyang Nursing Vocational College, Guiyang 550081, Guizhou, China
| | - Dhanushka N Wanasinghe
- Center for Mountain futures, Kunming Institute of Botany, Chinese Academy of Sciences, Honghe County 654400, Yunnan, China.,CIFOR-ICRAF China Program, World Agroforestry (ICRAF), Kunming 650201, Yunnan, China
| | - Jutamart Monkai
- School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand
| | - Peter E Mortimer
- Center for Mountain futures, Kunming Institute of Botany, Chinese Academy of Sciences, Honghe County 654400, Yunnan, China
| | - Kevin D Hyde
- School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand.,Guiyang Nursing Vocational College, Guiyang 550081, Guizhou, China
| | - Jian-Chu Xu
- Center for Mountain futures, Kunming Institute of Botany, Chinese Academy of Sciences, Honghe County 654400, Yunnan, China
| | - Aimin Pang
- Science and Technology on Aerospace Chemical Power Laboratory, Hubei Institute of Aerospace Chemotechnology, Xiangyang, 441003, Hubei, China
| | - Heng Gui
- Center for Mountain futures, Kunming Institute of Botany, Chinese Academy of Sciences, Honghe County 654400, Yunnan, China
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Rajeshkumar KC, Braun U, Groenewald JZ, Lad SS, Ashtekar N, Fatima S, Anand G. Phylogenetic placement and reassessment of Asperisporium pongamiae as Pedrocrousiella pongamiae gen. et comb. nov. ( Mycosphaerellaceae). Fungal Syst Evol 2021; 7:165-176. [PMID: 34124622 PMCID: PMC8166208 DOI: 10.3114/fuse.2021.07.08] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Accepted: 01/29/2021] [Indexed: 01/22/2023] Open
Abstract
The leaf spot disease of Pongamia pinnata caused by an asperisporium-like asexual morph, which is usually referred to as Asperisporium pongamiae, is quite common during monsoon seasons in India. Phylogenetic analyses, based on LSU and rpb2 sequence data, and blast searches using ITS sequence data, revealed that this ascomycete forms a lineage within Mycosphaerellaceae distant from all other generic lineages. Pedrocrousiella gen. nov., with P. pongamiae comb. nov., based on Fusicladium pongamiae (≡ A. pongamiae), as type species is introduced for this lineage. This species has been considered the asexual morph of Mycosphaerella pongamiae (≡ Stigmatea pongamiae). However, this connection is unproven and was just based on the occasional association of the two taxa in some collections. Several attempts to induce the formation of a sexual morph in culture failed, therefore the putative connection between these morphs could not be confirmed. Asperisporium pongamiae-pinnatae is reduced to synonymy with P. pongamiae. Asperisporium pongamiae-pinnatae was introduced because of the wrong assumption that F. pongamiae had been described on another host, Pongamia globosa. But Fusicladium pongamiae was actually described in India on Pongamia glabra, which is a synonym of P. pinnata, and hence on the same host as Asperisporium pongamiae-pinnatae. Pedrocrousiella pongamiae clusters in a clade containing Distocercospora, Clypeosphaerella, and “Pseudocercospora” nephrolepidicola, a species which is not congeneric with Pseudocercospora. Phylogenetically, Pedrocrousiella is distant from the Asperisporium s. str. clade (type species A. caricae), which is more closely related to Amycosphaerella, Pseudocercosporella, Distomycovellosiella and Nothopassalora. Citation: Rajeshkumar KC, Braun U, Groenewald JZ, Lad SS, Ashtekar N, Fatima S, Anand G (2021). Phylogenetic placement and reassessment of Asperisporium pongamiae as Pedrocrousiella pongamiae gen. et comb. nov. (Mycosphaerellaceae). Fungal Systematics and Evolution7: 165–176. doi: 10.3114/fuse.2021.07.08
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Affiliation(s)
- K C Rajeshkumar
- National Fungal Culture Collection of India (NFCCI), Biodiversity and Palaeobiology (Fungi) Group, Agharkar Research Institute, Pune, Maharashtra 411 004, India
| | - U Braun
- Martin-Luther-Universität Halle-Wittenberg, Institut für Biologie, Bereich Geobotanik, Herbarium, Neuwerk 21, 06099, Halle (Saale), Germany
| | - J Z Groenewald
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands
| | - S S Lad
- National Fungal Culture Collection of India (NFCCI), Biodiversity and Palaeobiology (Fungi) Group, Agharkar Research Institute, Pune, Maharashtra 411 004, India
| | - N Ashtekar
- National Fungal Culture Collection of India (NFCCI), Biodiversity and Palaeobiology (Fungi) Group, Agharkar Research Institute, Pune, Maharashtra 411 004, India
| | - S Fatima
- National Fungal Culture Collection of India (NFCCI), Biodiversity and Palaeobiology (Fungi) Group, Agharkar Research Institute, Pune, Maharashtra 411 004, India
| | - G Anand
- Department of Botany, University of Delhi, Delhi 110007, India
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Introducing a new pleosporalean family Sublophiostomataceae fam. nov. to accommodate Sublophiostoma gen. nov. Sci Rep 2021; 11:9496. [PMID: 33947898 PMCID: PMC8096836 DOI: 10.1038/s41598-021-88772-w] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2020] [Accepted: 04/12/2021] [Indexed: 11/16/2022] Open
Abstract
Collections of microfungi on bamboo and grasses in Thailand revealed an interesting species morphologically resembling Lophiostoma, but which can be distinguished from the latter based on multi-locus phylogeny. In this paper, a new genus, Sublophiostoma is introduced to accommodate the taxon, S. thailandica sp. nov. Phylogenetic analyses using combined ITS, LSU, RPB2, SSU, and TEF sequences demonstrate that six strains of the new species form a distinct clade within Pleosporales, but cannot be assigned to any existing family. Therefore, a new family Sublophiostomataceae (Pleosporales) is introduced to accommodate the new genus. The sexual morph of Sublophiostomataceae is characterized by subglobose to hemisphaerical, ostiolate ascomata, with crest-like openings, a peridium with cells of textura angularis to textura epidermoidea, cylindric-clavate asci with a bulbous or foot-like narrow pedicel and a well-developed ocular chamber, and hyaline, fusiform, 1-septate ascospores surrounded by a large mucilaginous sheath. The asexual morph (coelomycetous) of the species are observed on culture media.
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Mortimer PE, Jeewon R, Xu JC, Lumyong S, Wanasinghe DN. Morpho-Phylo Taxonomy of Novel Dothideomycetous Fungi Associated With Dead Woody Twigs in Yunnan Province, China. Front Microbiol 2021; 12:654683. [PMID: 33833748 PMCID: PMC8021917 DOI: 10.3389/fmicb.2021.654683] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2021] [Accepted: 02/25/2021] [Indexed: 01/02/2023] Open
Abstract
Within the field of mycology, macrofungi have been relatively well-studied when compared to microfungi. However, the diversity and distribution of microfungi inhabiting woody material have not received the same degree of research attention, especially in relatively unexplored regions, such as Yunnan Province, China. To help address this knowledge gap, we collected and examined fungal specimens from different plants at various locations across Yunnan Province. Our investigation led to the discovery of four species that are clearly distinct from extant ones. These taxonomic novelties were recognized based on morphological comparisons coupled with phylogenetic analyses of multiple gene sequences (non-translated loci and protein-coding regions). The monotypic genus Neoheleiosa gen. nov. (type: N. lincangensis) is introduced in Monoblastiaceae (Monoblastiales) for a woody-based saprobic ascomycete that possesses globose to subglobose or obpyriform ascomata with centric or eccentric, papillate ostioles, an ascomatal wall with thin-walled cells of textura globulosa, cylindric, pedicellate asci with an ocular chamber, and 1-septate, brown, guttulate, longitudinally striated, bicellular ascospores. Neoheleiosa has a close phylogenetic affinity to Heleiosa, nevertheless, it is morphologically dissimilar by its peridium cells and ornamented ascospores. Acrocalymma hongheense and A. yuxiense are described and illustrated as new species in Acrocalymmaceae. Acrocalymma hongheense is introduced with sexual and asexual (coelomycetous) features. The sexual morph is characterized by globose to subglobose, ostiolate ascomata, a peridium with textura angularis cells, cylindric-clavate asci with a furcate to truncate pedicel and an ocular chamber, hyaline, fusiform, 1-septate ascospores which are surrounded by a thick, distinct sheath, and the asexual morph is featured by pycnidial conidiomata, subcylindrical, hyaline, smooth, annelledic, conidiogenous cells, hyaline, guttulate, subcylindrical, aseptate conidia with mucoid ooze at the apex and with a rounded hilum at the base. Acrocalymma yuxiense is phylogenetically distinct from other extant species of Acrocalymma and differs from other taxa in Acrocalymma in having conidia with three vertical eusepta. Magnibotryascoma kunmingense sp. nov. is accommodated in Teichosporaceae based on its coelomycetous asexual morph which is characterized by pycnidial, globose to subglobose, papillate conidiomata, enteroblastic, annelledic, discrete, cylindrical to oblong, hyaline conidiogenous cells arising from the inner layer of pycnidium wall, subglobose, oval, guttulate, pale brown and unicelled conidia.
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Affiliation(s)
- Peter E. Mortimer
- CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand
- Honghe Center for Mountain Futures, Kunming Institute of Botany, Yunnan, China
| | - Rajesh Jeewon
- Department of Health Sciences, Faculty of Medicine and Health Sciences, University of Mauritius, Reduit, Mauritius
| | - Jian-Chu Xu
- CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Honghe Center for Mountain Futures, Kunming Institute of Botany, Yunnan, China
- World Agroforestry Centre, East and Central Asia, Kunming, China
| | - Saisamorn Lumyong
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand
- Faculty of Science, Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, Thailand
- Academy of Science, The Royal Society of Thailand, Bangkok, Thailand
| | - Dhanushka N. Wanasinghe
- CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- Honghe Center for Mountain Futures, Kunming Institute of Botany, Yunnan, China
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The Mitochondrial Genome of a Plant Fungal Pathogen Pseudocercospora fijiensis (Mycosphaerellaceae), Comparative Analysis and Diversification Times of the Sigatoka Disease Complex Using Fossil Calibrated Phylogenies. Life (Basel) 2021; 11:life11030215. [PMID: 33803147 PMCID: PMC7999263 DOI: 10.3390/life11030215] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2021] [Revised: 02/08/2021] [Accepted: 02/08/2021] [Indexed: 12/26/2022] Open
Abstract
Mycosphaerellaceae is a highly diverse fungal family containing a variety of pathogens affecting many economically important crops. Mitochondria play a crucial role in fungal metabolism and in the study of fungal evolution. This study aims to: (i) describe the mitochondrial genome of Pseudocercospora fijiensis, and (ii) compare it with closely related species (Sphaerulina musiva, S. populicola, P. musae and P. eumusae) available online, paying particular attention to the Sigatoka disease’s complex causal agents. The mitochondrial genome of P. fijiensis is a circular molecule of 74,089 bp containing typical genes coding for the 14 proteins related to oxidative phosphorylation, 2 rRNA genes and a set of 38 tRNAs. P. fijiensis mitogenome has two truncated cox1 copies, and bicistronic transcription of nad2-nad3 and atp6-atp8 confirmed experimentally. Comparative analysis revealed high variability in size and gene order among selected Mycosphaerellaceae mitogenomes likely to be due to rearrangements caused by mobile intron invasion. Using fossil calibrated Bayesian phylogenies, we found later diversification times for Mycosphaerellaceae (66.6 MYA) and the Sigatoka disease complex causal agents, compared to previous strict molecular clock studies. An early divergent Pseudocercospora fijiensis split from the sister species P. musae + P. eumusae 13.31 MYA while their sister group, the sister species P. eumusae and P. musae, split from their shared common ancestor in the late Miocene 8.22 MYA. This newly dated phylogeny suggests that species belonging to the Sigatoka disease complex originated after wild relatives of domesticated bananas (section Eumusae; 27.9 MYA). During this time frame, mitochondrial genomes expanded significantly, possibly due to invasions of introns into different electron transport chain genes.
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Czachura P, Owczarek-Kościelniak M, Piątek M. Salinomyces polonicus: A moderately halophilic kin of the most extremely halotolerant fungus Hortaea werneckii. Fungal Biol 2021; 125:459-468. [PMID: 34024593 DOI: 10.1016/j.funbio.2021.01.003] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Accepted: 01/13/2021] [Indexed: 01/04/2023]
Abstract
A clade where the most halotolerant fungus in the world - Hortaea werneckii, belongs (hereafter referred to as Hortaea werneckii lineage) includes five species: Hortaea werneckii, H. thailandica, Stenella araguata, Eupenidiella venezuelensis, and Magnuscella marina, of which the first species attracts increasing attention of mycologists. The species diversity and phylogenetic relationships within this lineage are weakly known. In this study two moderately halophilic black yeast strains were isolated from brine of graduation tower in Poland. Molecular phylogenetic analyses based on the rDNA ITS1-5.8S-ITS2 (=ITS), rDNA 28S D1-D2 (=LSU), and RNA polymerase II (rpb2) sequences showed that the two strains belong to Hortaea werneckii lineage but cannot be assigned to any described taxa. Accordingly, a new genus and species, Salinomyces and Salinomyces polonicus, are described for this fungus. Furthermore, molecular phylogenetic analyses have revealed that Hortaea thailandica is more closely related to S. polonicus than to H. werneckii. A new combination Salinomyces thailandicus is proposed for this fungus.
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Affiliation(s)
- Paweł Czachura
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512, Kraków, Poland.
| | | | - Marcin Piątek
- W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512, Kraków, Poland.
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Abstract
AbstractFreshwater Dothideomycetes are a highly diverse group of fungi, which are mostly saprobic in freshwater habitats worldwide. They are important decomposers of submerged woody debris and leaves in water. In this paper, we outline the genera of freshwater Dothideomycetes with notes and keys to species. Based on multigene analyses and morphology, we introduce nine new genera, viz. Aquimassariosphaeria, Aquatospora, Aquihelicascus, Fusiformiseptata, Neohelicascus, Neojahnula, Pseudojahnula, Purpureofaciens, Submersispora; 33 new species, viz. Acrocalymma bipolare, Aquimassariosphaeria kunmingensis, Aquatospora cylindrica, Aquihelicascus songkhlaensis, A. yunnanensis, Ascagilis submersa, A. thailandensis, Bambusicola aquatica, Caryospora submersa, Dictyocheirospora thailandica, Fusiformiseptata crocea, Helicosporium thailandense, Hongkongmyces aquaticus, Lentistoma aquaticum, Lentithecium kunmingense, Lindgomyces aquaticus, Longipedicellata aquatica, Neohelicascus submersus, Neohelicomyces dehongensis, N. thailandicus, Neohelicosporium submersum, Nigrograna aquatica, Occultibambusa kunmingensis, Parabambusicola aquatica, Pseudoasteromassaria aquatica, Pseudoastrosphaeriella aquatica, Pseudoxylomyces aquaticus, Purpureofaciens aquatica, Roussoella aquatica, Shrungabeeja aquatica, Submersispora variabilis, Tetraploa puzheheiensis, T. yunnanensis; 16 new combinations, viz. Aquimassariosphaeria typhicola, Aquihelicascus thalassioideus, Ascagilis guttulaspora, A. queenslandica, A. seychellensis, A. sunyatsenii, Ernakulamia xishuangbannaensis, Neohelicascus aquaticus, N. chiangraiensis, N. egyptiacus, N. elaterascus, N. gallicus, N. unilocularis, N. uniseptatus, Neojahnula australiensis, Pseudojahnula potamophila; 17 new geographical and habitat records, viz. Aliquandostipite khaoyaiensis, Aquastroma magniostiolata, Caryospora aquatica, C. quercus, Dendryphiella vinosa, Ernakulamia cochinensis, Fissuroma neoaggregatum, Helicotruncatum palmigenum, Jahnula rostrata, Neoroussoella bambusae, N. leucaenae, Occultibambusa pustula, Paramonodictys solitarius, Pleopunctum pseudoellipsoideum, Pseudocapulatispora longiappendiculata, Seriascoma didymosporum, Shrungabeeja vadirajensis and ten new collections from China and Thailand, viz. Amniculicola guttulata, Aquaphila albicans, Berkleasmium latisporum, Clohesyomyces aquaticus, Dictyocheirospora rotunda, Flabellascoma fusiforme, Pseudoastrosphaeriella bambusae, Pseudoxylomyces elegans, Tubeufia aquatica and T. cylindrothecia. Dendryphiella phitsanulokensis and Tubeufia roseohelicospora are synonymized with D. vinosa and T. tectonae, respectively. Six orders, 43 families and 145 genera which belong to freshwater Dothideomycetes are reviewed. Of these, 46 genera occur exclusively in freshwater habitats. A world map illustrates the distribution of freshwater Dothideomycetes.
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Hongsanan S, Hyde KD, Phookamsak R, Wanasinghe DN, McKenzie EHC, Sarma VV, Lücking R, Boonmee S, Bhat JD, Liu NG, Tennakoon DS, Pem D, Karunarathna A, Jiang SH, Jones GEB, Phillips AJL, Manawasinghe IS, Tibpromma S, Jayasiri SC, Sandamali D, Jayawardena RS, Wijayawardene NN, Ekanayaka AH, Jeewon R, Lu YZ, Phukhamsakda C, Dissanayake AJ, Zeng XY, Luo ZL, Tian Q, Thambugala KM, Dai D, Samarakoon MC, Chethana KWT, Ertz D, Doilom M, Liu JK(J, Pérez-Ortega S, Suija A, Senwanna C, Wijesinghe SN, Niranjan M, Zhang SN, Ariyawansa HA, Jiang HB, Zhang JF, Norphanphoun C, de Silva NI, Thiyagaraja V, Zhang H, Bezerra JDP, Miranda-González R, Aptroot A, Kashiwadani H, Harishchandra D, Sérusiaux E, Abeywickrama PD, Bao DF, Devadatha B, Wu HX, Moon KH, Gueidan C, Schumm F, Bundhun D, Mapook A, Monkai J, Bhunjun CS, Chomnunti P, Suetrong S, Chaiwan N, Dayarathne MC, Yang J, Rathnayaka AR, Xu JC, Zheng J, Liu G, Feng Y, Xie N. Refined families of Dothideomycetes: orders and families incertae sedis in Dothideomycetes. FUNGAL DIVERS 2020. [DOI: 10.1007/s13225-020-00462-6] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
AbstractNumerous new taxa and classifications of Dothideomycetes have been published following the last monograph of families of Dothideomycetes in 2013. A recent publication by Honsanan et al. in 2020 expanded information of families in Dothideomycetidae and Pleosporomycetidae with modern classifications. In this paper, we provide a refined updated document on orders and families incertae sedis of Dothideomycetes. Each family is provided with an updated description, notes, including figures to represent the morphology, a list of accepted genera, and economic and ecological significances. We also provide phylogenetic trees for each order. In this study, 31 orders which consist 50 families are assigned as orders incertae sedis in Dothideomycetes, and 41 families are treated as families incertae sedis due to lack of molecular or morphological evidence. The new order, Catinellales, and four new families, Catinellaceae, Morenoinaceae Neobuelliellaceae and Thyrinulaceae are introduced. Seven genera (Neobuelliella, Pseudomicrothyrium, Flagellostrigula, Swinscowia, Macroconstrictolumina, Pseudobogoriella, and Schummia) are introduced. Seven new species (Acrospermum urticae, Bogoriella complexoluminata, Dothiorella ostryae, Dyfrolomyces distoseptatus, Macroconstrictolumina megalateralis, Patellaria microspora, and Pseudomicrothyrium thailandicum) are introduced base on morphology and phylogeny, together with two new records/reports and five new collections from different families. Ninety new combinations are also provided in this paper.
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Al-Araimi SH, Elshafie A, Al-Bahry SN, Al-Wahaibi YM, Al-Bemani AS. Biopolymer production by Aureobasidium mangrovei SARA-138H and its potential for oil recovery enhancement. Appl Microbiol Biotechnol 2020; 105:105-117. [PMID: 33215258 DOI: 10.1007/s00253-020-11015-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2020] [Revised: 11/02/2020] [Accepted: 11/09/2020] [Indexed: 11/28/2022]
Abstract
The world economy depends heavily on crude oil. With a conventional oil recovery process, only one-third of crude oil is extracted. Various technologies have been developed to maximize the recovery of oil resources from natural reservoirs. Polymer technology has been used in many oil fields around the world. The biopolymer pullulan, produced by some Aureobasidium species, has been used in many industrial applications, but no research has been conducted regarding its use in the microbial enhancement of oil recovery (MEOR). Here, we investigate the potential of pullulan produced by newly isolated species Aureobasidium mangrovei SARA-138H for enhancement of oil recovery. Our results indicate that under optimized conditions, that is, sucrose as the carbon source in the medium, a pH of 9, incubation at 25 °C, and 250 rpm agitation, the fungus was able to produce 10 g/L of pullulan. The maximum viscosity achieved under these conditions was 318 cP after 15 days of incubation. Pullulan solution (10 g/L) showed the ability to recover 36.7% of heavy crude oil after 34.2% of secondary oil recovery. However, diluted pullulan in brine at the ratio (1:1) resulted in the recovery of 20.23% of oil from the residual oil in the core after 22.6% of secondary oil recovery. A 20-day injectivity test revealed that pullulan passed smoothly through the core, causing no blockage. It was concluded that pullulan from A. mangrovei SARA-138H was able to increase oil recovery to a degree comparable to that achieved with many polymers used in oil fields around the world. KEY POINTS: • First report of biopolymer "pullulan" from A. mangrovie. • Optimum conditions for pullulan production were obtained. • Pullulan recovered 36.7% of heavy oil from residual oil in place, with good injectivity.
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Affiliation(s)
- Sara H Al-Araimi
- Department of Biology, College of Science, Sultan Qaboos University, Muscat, Oman.
| | - Abdulkadir Elshafie
- Department of Biology, College of Science, Sultan Qaboos University, Muscat, Oman
| | - Saif N Al-Bahry
- Department of Biology, College of Science, Sultan Qaboos University, Muscat, Oman
| | - Yahya M Al-Wahaibi
- Department of Petroleum and Chemical Engineering, College of Engineering, Sultan Qaboos University, Muscat, Oman
| | - Ali S Al-Bemani
- Department of Petroleum and Chemical Engineering, College of Engineering, Sultan Qaboos University, Muscat, Oman
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Yuan HS, Lu X, Dai YC, Hyde KD, Kan YH, Kušan I, He SH, Liu NG, Sarma VV, Zhao CL, Cui BK, Yousaf N, Sun G, Liu SY, Wu F, Lin CG, Dayarathne MC, Gibertoni TB, Conceição LB, Garibay-Orijel R, Villegas-Ríos M, Salas-Lizana R, Wei TZ, Qiu JZ, Yu ZF, Phookamsak R, Zeng M, Paloi S, Bao DF, Abeywickrama PD, Wei DP, Yang J, Manawasinghe IS, Harishchandra D, Brahmanage RS, de Silva NI, Tennakoon DS, Karunarathna A, Gafforov Y, Pem D, Zhang SN, de Azevedo Santiago ALCM, Bezerra JDP, Dima B, Acharya K, Alvarez-Manjarrez J, Bahkali AH, Bhatt VK, Brandrud TE, Bulgakov TS, Camporesi E, Cao T, Chen YX, Chen YY, Devadatha B, Elgorban AM, Fan LF, Du X, Gao L, Gonçalves CM, Gusmão LFP, Huanraluek N, Jadan M, Jayawardena RS, Khalid AN, Langer E, Lima DX, de Lima-Júnior NC, de Lira CRS, Liu JK(J, Liu S, Lumyong S, Luo ZL, Matočec N, Niranjan M, Oliveira-Filho JRC, Papp V, Pérez-Pazos E, Phillips AJL, Qiu PL, Ren Y, Ruiz RFC, Semwal KC, Soop K, de Souza CAF, Souza-Motta CM, Sun LH, Xie ML, Yao YJ, Zhao Q, Zhou LW. Fungal diversity notes 1277–1386: taxonomic and phylogenetic contributions to fungal taxa. FUNGAL DIVERS 2020. [DOI: 10.1007/s13225-020-00461-7] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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Qiao M, Zheng H, Lv R, Yu Z. Neodactylariales, Neodactylariaceae (Dothideomycetes, Ascomycota): new order and family, with a new species from China. MycoKeys 2020; 73:69-85. [PMID: 32994703 PMCID: PMC7501314 DOI: 10.3897/mycokeys.73.54054] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2020] [Accepted: 08/21/2020] [Indexed: 12/28/2022] Open
Abstract
During a mycological survey of aquatic hyphomycetes on submerged decaying leaves in southwest China, a distinct new fungus was collected. The collection was cultured and sequenced and a BLAST search of its ITS and LSU sequence against data in GenBank revealed a dothideomycetous affiliation, with the closest related taxa in the genus Neodactylaria. Phylogenetic analyses of a multigene matrix containing sequences from four genes (LSU, SSU, rpb2, and tef1), representing broad groups of Dothideomycetes, revealed its placement within Dothideomycetes, but without a supported familial or ordinal affiliation. Based on further phylogenetic analyses and morphological investigations, the new fungus is described here as a new species of Neodactylaria, N.simaoensissp. nov., and placed in a new family Neodactylariaceaefam. nov. and a new order Neodactylarialesord. nov.
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Affiliation(s)
- Min Qiao
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China Yunnan University Kunming China
| | - Hua Zheng
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China Yunnan University Kunming China
| | - Ruili Lv
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China Yunnan University Kunming China
| | - Zefen Yu
- Laboratory for Conservation and Utilization of Bio-resources, Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, Yunnan, 650091, China Yunnan University Kunming China
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Bao DF, McKenzie EHC, Bhat DJ, Hyde KD, Luo ZL, Shen HW, Su HY. Acrogenospora (Acrogenosporaceae, Minutisphaerales) Appears to Be a Very Diverse Genus. Front Microbiol 2020; 11:1606. [PMID: 32793142 PMCID: PMC7393737 DOI: 10.3389/fmicb.2020.01606] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 06/19/2020] [Indexed: 11/13/2022] Open
Abstract
During a study of diversity and taxonomy of lignicolous freshwater fungi in China, nine species of Acrogenospora were collected. Seven of these were new species and they are described and illustrated. With morphology, additional evidence to support establishment of new species is provided by phylogeny derived from DNA sequence analyses of a combined LSU, SSU, TEF1α, and RPB2 sequence dataset. Acrogenospora subprolata and A. verrucispora were re-collected and sequenced for the first time. The genus Acrogenospora is far more species rich than originally thought, with nine species found in a small area of Yunnan Province, China.
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Affiliation(s)
- Dan-Feng Bao
- College of Agriculture and Biological Sciences, Dali University, Dali, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
| | | | | | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- Institute of Plant Health, Zhongkai University of Agriculture and Engineering, Guangzhou, China
| | - Zong-Long Luo
- College of Agriculture and Biological Sciences, Dali University, Dali, China
| | - Hong-Wei Shen
- College of Agriculture and Biological Sciences, Dali University, Dali, China
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
| | - Hong-Yan Su
- College of Agriculture and Biological Sciences, Dali University, Dali, China
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Wanasinghe DN, Wijayawardene NN, Xu J, Cheewangkoon R, Mortimer PE. Taxonomic novelties in Magnolia-associated pleosporalean fungi in the Kunming Botanical Gardens (Yunnan, China). PLoS One 2020; 15:e0235855. [PMID: 32658904 PMCID: PMC7357747 DOI: 10.1371/journal.pone.0235855] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2020] [Accepted: 06/22/2020] [Indexed: 11/24/2022] Open
Abstract
This paper represents the first article in a series on Yunnanese microfungi. We herein provide insights into Magnolia species associated with microfungi. All presented data are reported from the Kunming Botanical Gardens. Final conclusions were derived from the morphological examination of specimens coupled with phylogenetic sequence data to better integrate taxa into appropriate taxonomic ranks and infer their relationships. Shearia formosa, the type species of Shearia, lacks type material, and its phylogenetic position accordingly remains unresolved. A fresh collection of Shearia formosa, obtained from Magnolia denudata and M. soulangeana in China, therefore, designated a neotype for stabilizing the application of the species and/or genus name. Phylogenetic analyses of a combined DNA data matrix containing SSU, LSU, RPB2 and TEF loci of representative Pleosporales revealed that the genera Crassiperidium, Longiostiolum and Shearia are a well-defined monophylum. It is recognized as the family Longiostiolaceae and strongly supported by Bayesian and Maximum Likelihood methods. Its members are characterized by immersed to semi-immersed, globose to subglobose ascomata with a central, periphysate ostiole, a peridium composed of rectangular to polygonal cells, cylindrical to clavate asci, broadly fusiform, hyaline to pale brown ascospores, a coelomycetous asexual morph with pycnidial conidiomata, enteroblastic, annellidic, ampulliform, doliiform or cylindrical conidiogenous cells and cylindrical to fusiform, transverse and sometimes laterally distoseptate conidia without a sheath or with a basal lateral sheath. Nigrograna magnoliae sp. nov. is introduced from Magnolia denudata with both asexual and sexual morphs. We observed the asexual morph of Brunneofusispora sinensis from the culture and therefore amended the generic and species descriptions of Brunneofusispora.
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Affiliation(s)
- Dhanushka N. Wanasinghe
- CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming, Yunnan, China
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
- World Agroforestry, East and Central Asia, Kunming, Yunnan, China
- Center for Mountain Futures, Kunming Institute of Botany, Honghe County, Yunnan, China
| | - Nalin N. Wijayawardene
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan, China
| | - Jianchu Xu
- CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming, Yunnan, China
- World Agroforestry, East and Central Asia, Kunming, Yunnan, China
- Center for Mountain Futures, Kunming Institute of Botany, Honghe County, Yunnan, China
| | - Ratchadawan Cheewangkoon
- Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
- Innovative Agriculture Research Center, Faculty of Agriculture, Chiang Mai University, Chiang Mai, Thailand
- Center of Excellence in Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, Thailand
- * E-mail: (RC); (PEM)
| | - Peter E. Mortimer
- CAS Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming, Yunnan, China
- * E-mail: (RC); (PEM)
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Pem D, Jeewon R, Selcuk F, Ulukapi M, Bhat J, Doilom M, Lumyong S, Hyde KD. Ribosomal and Protein Gene Phylogeny Reveals Novel Saprobic Fungal Species From Juglans regia and Urtica dioica. Front Microbiol 2020; 11:1303. [PMID: 32714291 PMCID: PMC7341955 DOI: 10.3389/fmicb.2020.01303] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2020] [Accepted: 05/22/2020] [Indexed: 11/22/2022] Open
Abstract
During an ongoing investigation of Ascomycetes from plant substrates, three saprobic species were found from plant substrates. Two new species, Leptosphaeria regiae and Neomicrosphaeropsis juglandis were isolated from dead branches of Juglans regia from Turkey. Another species is introduced herein as Subplenodomus urticae sp. nov within the family Leptosphaeriaceae found on Urtica dioica in Italy. Multigene phylogenies based on combined LSU, ITS, SSU, and β-tubulin DNA sequence data generated from maximum likelihood and MrBayes analyses indicate that Leptosphaeria regiae is related to L. slovacica and forms an independent lineage within the genus Leptosphaeria. Subplenodomus urticae is basal to S. iridicola and its establishment as a new species is strongly supported. Neomicrosphaeropsis juglandis forms a moderately supported lineage in between N. italica and N. elaeagni in the Didymellaceae. Full morphological details are provided herein and phylogenetic relationships of the three new species are also discussed.
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Affiliation(s)
- Dhandevi Pem
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- Faculty of Science, Mae Fah Luang University, Chiang Rai, Thailand
| | - Rajesh Jeewon
- Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, Mauritius
| | - Faruk Selcuk
- Department of Molecular Biology and Genetic, Sciences and Arts Faculty, Kırşehir Ahi Evran University, Kirsehir, Turkey
| | - Merve Ulukapi
- Biology Department, Graduate School of Natural and Applied Sciences, Kırşehir Ahi Evran University, Kirsehir, Turkey
| | | | - Mingkwan Doilom
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- World Agroforestry Centre, Kunming, China
- Honghe Center for Mountain Futures, Kunming Institute of Botany, Kunming, China
| | - Saisamorn Lumyong
- Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, Thailand
- Academy of Science, The Royal Society of Thailand, Bangkok, Thailand
| | - Kevin D. Hyde
- Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, Thailand
- Faculty of Science, Mae Fah Luang University, Chiang Rai, Thailand
- Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, China
- World Agroforestry Centre, Kunming, China
- Research Center of Microbial Diversity and Sustainable Utilization, Chiang Mai University, Chiang Mai, Thailand
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Mapook A, Hyde KD, McKenzie EHC, Jones EBG, Bhat DJ, Jeewon R, Stadler M, Samarakoon MC, Malaithong M, Tanunchai B, Buscot F, Wubet T, Purahong W. Taxonomic and phylogenetic contributions to fungi associated with the invasive weed Chromolaena odorata (Siam weed). FUNGAL DIVERS 2020. [DOI: 10.1007/s13225-020-00444-8] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Abstract
Members of Venturiales (Dothideomycetes) are widely distributed, and comprise saprobes, as well as plant, human and animal pathogens. In spite of their economic importance, the general lack of cultures and DNA data has resulted in taxa being poorly resolved. In the present study five loci, ITS, LSU rDNA, tef1, tub2 and rpb2 are used for analysing 115 venturialean taxa representing 30 genera in three families in the current classification of Venturiales. Based on the multigene phylogenetic analysis, morphological and ecological characteristics, one new family, Cylindrosympodiaceae, and eight new genera are described, namely Bellamyces, Fagicola, Fraxinicola, Fuscohilum,Neofusicladium, Parafusicladium, Pinaceicola and Sterila. In addition, 12 species are described as new to science, and 41 new combinations are proposed. The taxonomic status of 153 species have been re-evaluated with 20 species excluded from Venturiales. Based on this revision of Venturiales, morphological characteristics such as conidial arrangement (solitary or in chains) or conidiogenesis (blastic-solitary, sympodial or annellidic), proved to be significant at generic level. Venturia as currently defined represents a generic complex. Furthermore, plant pathogens appear more terminal in phylogenetic analyses within Venturiaceae and Sympoventuriaceae, suggesting that the ancestral state of Venturiales is most likely saprobic.
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Key Words
- Bellamyces Crous, Coppins & U. Braun
- Bellamyces quercus Crous, Coppins & U. Braun
- Cylindrosympodiaceae Crous, M. Shen & Y. Zhang ter
- Fagicola Crous, M. Shen & Y. Zhang ter
- Fagicola fagi (Crous & de Hoog) Crous, M. Shen & Y. Zhang ter
- Fraxinicola Crous, M. Shen & Y. Zhang ter
- Fraxinicola europaea Crous, M. Shen & Y. Zhang ter
- Fraxinicola fraxini (Aderh.) Crous, M. Shen & Y. Zhang ter
- Fraxinicola italica Crous, M. Shen & Y. Zhang ter
- Fraxinicola orni (M. Ibrahim et al.) Crous, M. Shen & Y. Zhang ter
- Fuscohil`um Crous, M. Shen & Y. Zhang ter
- Fuscohilum Crous, M. Shen & Y. Zhang ter
- Fuscohilum rhodensis (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter, Fuscohilum siciliana (Koukol) Crous, M. Shen & Y. Zhang ter
- Multigene analysis
- Neocoleroa cameroonensis Crous, M. Shen & Y. Zhang ter
- Neofusicladium Crous, M. Shen & Y. Zhang ter
- Neofusicladium eucalypti (Crous & R.G. Shivas) Crous, M. Shen & Y. Zhang ter
- Neofusicladium eucalypticola (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter
- Neofusicladium regnans (Crous) Crous, M. Shen & Y. Zhang ter
- New taxa
- Niesslia iridicola (M.E. Barr) Crous, M. Shen & Y. Zhang ter
- Niesslia parasitica (Ellis & Everh.) M. Shen & Y. Zhang ter
- Niesslia vaccinii (Ellis & Everh.) Crous, M. Shen & Y. Zhang ter
- Parafusicladium Crous, M. Shen & Y. Zhang ter
- Parafusicladium amoenum (R.F. Castañeda & Dugan) Crous, M. Shen & Y. Zhang ter
- Parafusicladium intermedium (Crous & W.B. Kendr.) Crous, M. Shen & Y. Zhang ter
- Parafusicladium paraamoenum (Crous et al.) Crous, M. Shen & Y. Zhang ter
- Pinaceicola Crous, M. Shen & Y. Zhang ter
- Pinaceicola cordae (Koukol) Crous, M. Shen & Y. Zhang ter
- Pinaceicola pini(Crous & de Hoog) Crous, M. Shen & Y. Zhang ter
- Pseudosigmoidea excentrica (R.F. Castañeda et al.) Crous, M. Shen & Y. Zhang ter
- Scab disease
- Scolecobasidium aquaticum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium atlanticuum (A.M. Wellman) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium bacilliforme (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium capsici (Crous & Cheew.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium cordanae (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium dracaenae (Crous) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium globale (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium icarus (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium macrozamiae (Crous & R.G. Shivas) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium minimum (Fassat.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium musicola (Crous) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium olivaceum (A. Giraldo et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium pandanicola (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium phaeophorum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium podocarpi (Crous) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium ramosum (A. Giraldo et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium robustum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium sexuale (Samerp. et al.) Crous, M. Shen & Y. Zhang ter
- Scolecobasidium verrucosum (Zachariah et al.) Crous, M. Shen & Y. Zhang ter
- Sterila Crous, M. Shen & Y. Zhang ter
- Sterila eucalypti Crous, M. Shen & Y. Zhang ter
- Sympoventuria africana (Crous) Crous, M. Shen & Y. Zhang ter
- Systematics
- Tyrannosorus hanlinianus (U. Braun & Feiler) Crous, M. Shen & Y. Zhang ter
- Tyrannosorus hystrioides (Dugan et al.) Crous, M. Shen & Y. Zhang ter
- Tyrannosorus lichenicola Crous, M. Shen & Y. Zhang ter
- Tyrannosorus pini-sylvestris Crous & R.K. Schumach.
- Venturia
- Venturia albae Crous, M. Shen & Y. Zhang ter
- Venturia australiana Crous, M. Shen & Y. Zhang ter
- Venturia caesiae Crous, M. Shen & Y. Zhang ter
- Venturia finlandica Crous, M. Shen & Y. Zhang ter
- Venturia peltigericola (Crous & Diederich) Crous, M. Shen & Y. Zhang ter
- Venturia quebecensis Crous, M. Shen & Y. Zhang ter
- Verruconis terricola (J. Ren et al.) Crous, M. Shen & Y. Zhang ter
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Affiliation(s)
- M Shen
- School of Ecology and Nature Conservation, Beijing Forestry University, P.O. Box 61, Beijing, 100083, PR China
| | - J Q Zhang
- School of Ecology and Nature Conservation, Beijing Forestry University, P.O. Box 61, Beijing, 100083, PR China
| | - L L Zhao
- School of Ecology and Nature Conservation, Beijing Forestry University, P.O. Box 61, Beijing, 100083, PR China
| | - J Z Groenewald
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT, Utrecht, The Netherlands
| | - P W Crous
- Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT, Utrecht, The Netherlands
| | - Y Zhang
- School of Ecology and Nature Conservation, Beijing Forestry University, P.O. Box 61, Beijing, 100083, PR China
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Li WJ, McKenzie EHC, Liu JK(J, Bhat DJ, Dai DQ, Camporesi E, Tian Q, Maharachchikumbura SSN, Luo ZL, Shang QJ, Zhang JF, Tangthirasunun N, Karunarathna SC, Xu JC, Hyde KD. Taxonomy and phylogeny of hyaline-spored coelomycetes. FUNGAL DIVERS 2020. [DOI: 10.1007/s13225-020-00440-y] [Citation(s) in RCA: 31] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Jiang HB, Phookamsak R, Xu J, Karunarathna SC, Mortimer PE, Hyde KD. Taxonomic and phylogenetic characterizations reveal three new species of Mendogia (Myriangiaceae, Myriangiales). Mycol Prog 2020. [DOI: 10.1007/s11557-019-01540-z] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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Guarnaccia V, Gehrmann T, Silva‐Junior GJ, Fourie PH, Haridas S, Vu D, Spatafora J, Martin FM, Robert V, Grigoriev IV, Groenewald JZ, Crous PW. Phyllosticta citricarpa and sister species of global importance to Citrus. MOLECULAR PLANT PATHOLOGY 2019; 20:1619-1635. [PMID: 31512371 PMCID: PMC6859488 DOI: 10.1111/mpp.12861] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Several Phyllosticta species are known as pathogens of Citrus spp., and are responsible for various disease symptoms including leaf and fruit spots. One of the most important species is P. citricarpa, which causes a foliar and fruit disease called citrus black spot. The Phyllosticta species occurring on citrus can most effectively be distinguished from P. citricarpa by means of multilocus DNA sequence data. Recent studies also demonstrated P. citricarpa to be heterothallic, and reported successful mating in the laboratory. Since the domestication of citrus, different clones of P. citricarpa have escaped Asia to other continents via trade routes, with obvious disease management consequences. This pathogen profile represents a comprehensive literature review of this pathogen and allied taxa associated with citrus, focusing on identification, distribution, genomics, epidemiology and disease management. This review also considers the knowledge emerging from seven genomes of Phyllosticta spp., demonstrating unknown aspects of these species, including their mating behaviour. TAXONOMY Phyllosticta citricarpa (McAlpine) Aa, 1973. Kingdom Fungi, Phylum Ascomycota, Class Dothideomycetes, Order Botryosphaeriales, Family Phyllostictaceae, Genus Phyllosticta, Species citricarpa. HOST RANGE Confirmed on more than 12 Citrus species, Phyllosticta citricarpa has only been found on plant species in the Rutaceae. DISEASE SYMPTOMS P. citricarpa causes diverse symptoms such as hard spot, virulent spot, false melanose and freckle spot on fruit, and necrotic lesions on leaves and twigs. USEFUL WEBSITES DOE Joint Genome Institute MycoCosm portals for the Phyllosticta capitalensis (https://genome.jgi.doe.gov/Phycap1), P. citriasiana (https://genome.jgi.doe.gov/Phycit1), P. citribraziliensis (https://genome.jgi.doe.gov/Phcit1), P. citrichinaensis (https://genome.jgi.doe.gov/Phcitr1), P. citricarpa (https://genome.jgi.doe.gov/Phycitr1, https://genome.jgi.doe.gov/Phycpc1), P. paracitricarpa (https://genome.jgi.doe.gov/Phy27169) genomes. All available Phyllosticta genomes on MycoCosm can be viewed at https://genome.jgi.doe.gov/Phyllosticta.
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Affiliation(s)
- Vladimiro Guarnaccia
- Westerdijk Fungal Biodiversity InstituteUtrechtNetherlands
- DiSAFA, University of TorinoLargo Paolo Braccini 210095GrugliascoTOItaly
| | - Thies Gehrmann
- Westerdijk Fungal Biodiversity InstituteUtrechtNetherlands
| | | | - Paul H. Fourie
- Citrus Research InternationalP.O. Box 28Nelspruit1200South Africa
- Department of Plant PathologyStellenbosch UniversityPrivate Bag X1Stellenbosch7602South Africa
| | - Sajeet Haridas
- US Department of Energy Joint Genome Institute2800 Mitchell Dr.Walnut CreekCA94598USA
| | - Duong Vu
- Westerdijk Fungal Biodiversity InstituteUtrechtNetherlands
| | - Joseph Spatafora
- Department of Botany and Plant PathologyOregon State UniversityCordley Hall 2082Corvallis97331‐2902ORUSA
| | - Francis M. Martin
- Institut National de la Recherche Agronomique, UMR INRA‐Université de Lorraine “Interaction Arbres/Microorganismes”ChampenouxFrance
| | - Vincent Robert
- Westerdijk Fungal Biodiversity InstituteUtrechtNetherlands
| | - Igor V. Grigoriev
- US Department of Energy Joint Genome Institute2800 Mitchell Dr.Walnut CreekCA94598USA
| | | | - Pedro W. Crous
- Westerdijk Fungal Biodiversity InstituteUtrechtNetherlands
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Hudson O, Buchholz M, Doyle V, Sundue MA. Multilocus phylogeny of Acrospermaceae: New epibiotic species and placement of Gonatophragmium, Pseudovirgaria, and Phaeodactylium anamorphs. Mycologia 2019; 111:1041-1055. [PMID: 31647754 DOI: 10.1080/00275514.2019.1668905] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Acrospermum is a poorly known genus of epibiotic and saprophytic species with a subcosmopolitan distribution. Here, we investigate the intriguing relationship between Acrospermum and its host plants in the fern family Polypodiaceae, where it occurs upon approximately 45 neotropical species. We conducted phylogenetic analyses using an eight-marker comprehensive ascomycete data set comprising 719 species representing all major lineages along with 23 new Acrospermum specimens sampled from ferns. We ask whether fern-dwelling Acrospermum are monophyletic, whether epibiotic Acrospermum have evolved independently from saprophytic ancestors, and identify anamorphic phases by incorporating sequences for all suspected taxa. Our results corroborate the placement of Acrospermales within the Dothideomycetes with strong support. However, the order remains incertae sedis due to weak support along the branches subtending the clade that includes the Acrospermales plus Dyfrolomycetales. Our results show a strong phylogenetic pattern in lifestyles but do not clearly identify an ancestral life history state. The first divergence in Acrospermaceae splits fungicolous taxa from taxa that inhabit plants; saprophytes and anamorphic phases found on angiosperms occur in both clades. Fungicolous species are monophyletic, whereas species with an epibiotic or necrotic life history upon plants are nonmonophyletic due to the position of the saprophyte A. longisporium. Previously, all Acrospermum collected from ferns were identified as A. maxonii. Our results indicate that this is not monophyletic due to the inclusion of Gonatophragmium triuniae. Two species are described herein as A. gorditum, sp. nov., and A. leucocephalum, sp. nov. We find no instances of co-cladogenesis; however, our ability to detect this is limited by the lack of resolution in the A. maxonii clade. Rather, we see that that the distribution of epibiotic Acrospermum is explained by the overlap between the ecological niche of the Acrospermum species and its host.
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Affiliation(s)
- Owen Hudson
- Pringle Herbarium, Department of Plant Biology, University of Vermont, 111 Jeffords Hall, 63 Carrigan Drive, Burlington, Vermont 05405
| | - Maximilian Buchholz
- Pringle Herbarium, Department of Plant Biology, University of Vermont, 111 Jeffords Hall, 63 Carrigan Drive, Burlington, Vermont 05405
| | - Vinson Doyle
- Department of Plant Pathology and Crop Physiology, Louisiana State University Agricultural Center, Baton Rouge, Louisiana 70803
| | - Michael A Sundue
- Pringle Herbarium, Department of Plant Biology, University of Vermont, 111 Jeffords Hall, 63 Carrigan Drive, Burlington, Vermont 05405
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One stop shop III: taxonomic update with molecular phylogeny for important phytopathogenic genera: 51–75 (2019). FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00433-6] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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Sugiyama J, Hosoya T. Antennatula katumotoi, a new euantennariaceous sooty mould, with a Hormisciomyces-like synasexual morph from central Honshu, Japan. MYCOSCIENCE 2019. [DOI: 10.1016/j.myc.2019.06.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Dai DQ, Wijayawardene NN, Tang LZ, Liu C, Han LH, Chu HL, Wang HB, Liao CF, Yang EF, Xu RF, Li YM, Hyde KD, Bhat DJ, Cannon PF. Rubroshiraia gen. nov., a second hypocrellin-producing genus in Shiraiaceae (Pleosporales). MycoKeys 2019; 58:1-26. [PMID: 31534413 PMCID: PMC6726671 DOI: 10.3897/mycokeys.58.36723] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Accepted: 08/13/2019] [Indexed: 12/22/2022] Open
Abstract
Shiraiaceae is an important family in Pleosporales (Dothideomycetes), which includes medical fungi and plant pathogens. Two hypocrellin-producing taxa, Shiraiabambusicola and a novel genus Rubroshiraiagen. nov., typified by Rubroshiraiabambusae are treated in this article. Maximum likelihood analysis, generated via RAxML (GTR+G model), using a combined SSU, LSU, TEF1 and RPB2 sequence dataset, shows that Rubroshiraia is close to Shiraia and belongs to the family Shiraiaceae. Descriptions, illustrations and a taxonomic key are provided for the genera in Shiraiaceae. Rubroshiraia morphologically differs from Shiraia in having small and dark ascostromata and filiform ascospores. Production of the ascostromatal metabolites, hypocrellin A and B, were examined by HPLC and spectrophotometer. The content of hypocrellin A and B of specimen HKAS 102255 (R.bambusae) is twice that produced by HKAS 102253 (S.bambusicola). To clarify the relationship between R.bambusae and Hypocrellabambusae, type material of the latter was examined and provided the illustration.
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Affiliation(s)
- Dong-Qin Dai
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Nalin N Wijayawardene
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Li-Zhou Tang
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China.,State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, Yunnan 650223, China Kunming Institute of Zoology, Chinese Academy of Sciences Kunming China
| | - Chao Liu
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Li-Hong Han
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Hong-Long Chu
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Hai-Bo Wang
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Chun-Fang Liao
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Er-Fu Yang
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Rui-Fang Xu
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Yun-Min Li
- Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China Qujing Normal University Qujing China
| | - Kevin D Hyde
- Centre of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand Mae Fah Luang University Chiang Rai Thailand
| | - D Jayarama Bhat
- No. 128/1-J, Azad Housing Society, Curca, P.O. Goa Velha 403108, India Unaffiliated Goa India
| | - Paul F Cannon
- Royal Botanic Gardens, Kew, Surrey TW9 3AB, UK Royal Botanic Gardens Kew United Kingdom
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Chakdar H, Goswami SK, Singh E, Choudhary P, Yadav J, Kashyap PL, Srivastava AK, Saxena AK. noxB-based marker for Alternaria spp.: a new diagnostic marker for specific and early detection in crop plants. 3 Biotech 2019; 9:249. [PMID: 31218173 DOI: 10.1007/s13205-019-1779-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2018] [Accepted: 05/26/2019] [Indexed: 10/26/2022] Open
Abstract
Alternaria species are a major plant pathogen and their precise detection and identification is crucial for effective management. In the present study, a polymerase chain reaction (PCR)-based diagnostic technique has been developed for detection of Alternaria species. Four primers were designed for four genes viz. noxB, AMK1, AKT3 and NIK1. In gradient PCR, only the primer sets for noxB gene showed specific amplicon of ~ 200 bp in all the isolates of Alternaria, while no amplification was observed in related fungal species such as Ulocladium botrytis, Ulocladium consortiale, Stemphylium vesicarium, Cochliobolus tuberculatus, Curvularia prasadii, and Bipolaris sorokiniana. The noxB primer set was used as diagnostic marker to discriminate and diagnose Alternaria species in nine different crop plants. Real-time assay revealed that the primer set was able to detect Alternaria noxB genes in leaves with no characteristic visible symptoms. Through real-time PCR, the noxB gene of Alternaria could be detected even in 0.5 ng of host DNA. This is the first report of noxB gene for molecular detection of Alternaria spp.
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Fungal diversity notes 1036–1150: taxonomic and phylogenetic contributions on genera and species of fungal taxa. FUNGAL DIVERS 2019. [DOI: 10.1007/s13225-019-00429-2] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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