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Mäkinen H, Suhonen H, Siiskonen T, David C, Huotari S. Optimization of contrast and dose in x-ray phase-contrast tomography with a Talbot-Lau interferometer. Biomed Phys Eng Express 2024; 10:045045. [PMID: 38815565 DOI: 10.1088/2057-1976/ad5206] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Accepted: 05/30/2024] [Indexed: 06/01/2024]
Abstract
X-ray phase-contrast imaging has become a valuable tool for biomedical research due to its improved contrast abilities over regular attenuation-based imaging. The recently emerged Talbot-Lau interferometer can provide quantitative attenuation, phase-contrast and dark-field image data, even with low-brilliance x-ray tube sources. Thus, it has become a valid option for clinical environments. In this study, we analyze the effects of x-ray tube voltage and total number of images on the contrast-to-noise ratio (CNR) and dose-weighted CNR (CNRD) calculated from tomographic transmission and phase-contrast data of a phantom sample. Constant counting statistics regardless of the voltage was ensured by adjusting the image exposure time for each voltage setting. The results indicate that the x-ray tube voltage has a clear effect on both image contrast and noise. This effect is amplified in the case of phase-contrast images, which is explained by the polychromatic x-ray spectrum and the dependence of interferometer visibility on the spectrum. CNRD is additionally affected by the total imaging time. While submerging the sample into a water container effectively reduces image artefacts and improves the CNR, the additional attenuation of the water must be compensated with a longer exposure time. This reduces dose efficiency. Both the CNR and CNRD are higher in the phase-contrast images compared to transmission images. For transmission images, and phase-contrast images without the water container, CNRD can be increased by using higher tube voltages (in combination with a lower exposure time). For phase-contrast images with the water container, CNRD is increased with lower tube voltages. In general, the CNRD does not strongly depend on the number of tomographic angles or phase steps used.
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Affiliation(s)
- Henrik Mäkinen
- Department of Physics, PO Box 64, FI-00014 University of Helsinki, Finland
| | - Heikki Suhonen
- Department of Physics, PO Box 64, FI-00014 University of Helsinki, Finland
| | - Teemu Siiskonen
- Department of Physics, PO Box 64, FI-00014 University of Helsinki, Finland
- Measurements and Environmental Monitoring, Radiation and Nuclear Safety Authority (STUK), Jokiniemenkuja 1, FI-01370 Vantaa, Finland
| | - Christian David
- Paul Scherrer Institute, Forschungsstrasse 111, CH-5232 Villigen, Switzerland
| | - Simo Huotari
- Department of Physics, PO Box 64, FI-00014 University of Helsinki, Finland
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Smith R, Morgan K, McCarron A, Cmielewski P, Reyne N, Parsons D, Donnelley M. Ultra-fast in vivodirectional dark-field x-ray imaging for visualising magnetic control of particles for airway gene delivery. Phys Med Biol 2024; 69:105025. [PMID: 38640914 DOI: 10.1088/1361-6560/ad40f5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2024] [Accepted: 04/19/2024] [Indexed: 04/21/2024]
Abstract
Objective.Magnetic nanoparticles can be used as a targeted delivery vehicle for genetic therapies. Understanding how they can be manipulated within the complex environment of live airways is key to their application to cystic fibrosis and other respiratory diseases.Approach.Dark-field x-ray imaging provides sensitivity to scattering information, and allows the presence of structures smaller than the detector pixel size to be detected. In this study, ultra-fast directional dark-field synchrotron x-ray imaging was utlilised to understand how magnetic nanoparticles move within a live, anaesthetised, rat airway under the influence of static and moving magnetic fields.Main results.Magnetic nanoparticles emerging from an indwelling tracheal cannula were detectable during delivery, with dark-field imaging increasing the signal-to-noise ratio of this event by 3.5 times compared to the x-ray transmission signal. Particle movement as well as particle retention was evident. Dynamic magnetic fields could manipulate the magnetic particlesin situ. Significance.This is the first evidence of the effectiveness ofin vivodark-field imaging operating at these spatial and temporal resolutions, used to detect magnetic nanoparticles. These findings provide the basis for further development toward the effective use of magnetic nanoparticles, and advance their potential as an effective delivery vehicle for genetic agents in the airways of live organisms.
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Affiliation(s)
- Ronan Smith
- Adelaide Medical School, University of Adelaide, North Terrace, Adelaide, Australia
- Women's and Children's Hospital, King William Road, Adelaide, Australia
- Robinson Research Institute, University of Adelaide, King William Road, Adelaide, Australia
| | - Kaye Morgan
- Department of Physics, Monash University, Wellington Road, Melbourne, Australia
| | - Alexandra McCarron
- Adelaide Medical School, University of Adelaide, North Terrace, Adelaide, Australia
- Women's and Children's Hospital, King William Road, Adelaide, Australia
- Robinson Research Institute, University of Adelaide, King William Road, Adelaide, Australia
| | - Patricia Cmielewski
- Adelaide Medical School, University of Adelaide, North Terrace, Adelaide, Australia
- Women's and Children's Hospital, King William Road, Adelaide, Australia
- Robinson Research Institute, University of Adelaide, King William Road, Adelaide, Australia
| | - Nicole Reyne
- Adelaide Medical School, University of Adelaide, North Terrace, Adelaide, Australia
- Women's and Children's Hospital, King William Road, Adelaide, Australia
- Robinson Research Institute, University of Adelaide, King William Road, Adelaide, Australia
| | - David Parsons
- Adelaide Medical School, University of Adelaide, North Terrace, Adelaide, Australia
- Women's and Children's Hospital, King William Road, Adelaide, Australia
- Robinson Research Institute, University of Adelaide, King William Road, Adelaide, Australia
| | - Martin Donnelley
- Adelaide Medical School, University of Adelaide, North Terrace, Adelaide, Australia
- Women's and Children's Hospital, King William Road, Adelaide, Australia
- Robinson Research Institute, University of Adelaide, King William Road, Adelaide, Australia
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Schaff F, Jud C, Dierolf M, Günther B, Achterhold K, Gleich B, Sauter A, Woertler K, Thalhammer J, Meurer F, Neumann J, Pfeiffer F, Pfeiffer D. Feasibility of Dark-Field Radiography to Enhance Detection of Nondisplaced Fractures. Radiology 2024; 311:e231921. [PMID: 38805732 DOI: 10.1148/radiol.231921] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/30/2024]
Abstract
Background Many clinically relevant fractures are occult on conventional radiographs and therefore challenging to diagnose reliably. X-ray dark-field radiography is a developing method that uses x-ray scattering as an additional signal source. Purpose To investigate whether x-ray dark-field radiography enhances the depiction of radiographically occult fractures in an experimental model compared with attenuation-based radiography alone and whether the directional dependence of dark-field signal impacts observer ratings. Materials and Methods Four porcine loin ribs had nondisplaced fractures experimentally introduced. Microstructural changes were visually verified using high-spatial-resolution three-dimensional micro-CT. X-ray dark-field radiographs were obtained before and after fracture, with the before-fracture scans serving as control images. The presence of a fracture was scored by three observers using a six-point scale (6, surely; 5, very likely; 4, likely; 3, unlikely; 2, very unlikely; and 1, certainly not). Differences between scores based on attenuation radiographs alone (n = 96) and based on combined attenuation and dark-field radiographs (n = 96) were evaluated by using the DeLong method to compare areas under the receiver operating characteristic curve. The impact of the dark-field signal directional sensitivity on observer ratings was evaluated using the Wilcoxon test. The dark-field data were split into four groups (24 images per group) according to their sensitivity orientation and tested against each other. Musculoskeletal dark-field radiography was further demonstrated on human finger and foot specimens. Results The addition of dark-field radiographs was found to increase the area under the receiver operating characteristic curve to 1 compared with an area under the receiver operating characteristic curve of 0.87 (95% CI: 0.80, 0.94) using attenuation-based radiographs alone (P < .001). There were similar observer ratings for the four different dark-field sensitivity orientations (P = .16-.65 between the groups). Conclusion These results suggested that the inclusion of dark-field radiography has the potential to help enhance the detection of nondisplaced fractures compared with attenuation-based radiography alone. © RSNA, 2024 See also the editorial by Rubin in this issue.
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Affiliation(s)
- Florian Schaff
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Christoph Jud
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Martin Dierolf
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Benedikt Günther
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Klaus Achterhold
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Bernhard Gleich
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Andreas Sauter
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Klaus Woertler
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Johannes Thalhammer
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Felix Meurer
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Jan Neumann
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Franz Pfeiffer
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
| | - Daniela Pfeiffer
- From the Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, James-Franck-Str 1, 85748 Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany (F.S., C.J., M.D., B. Günther, K.A., B. Gleich, J.T., F.P.); Max-Planck-Institute of Quantum Optics, Garching, Germany (B. Günther); Department of Diagnostic and Interventional Radiology (A.S., K.W., J.T., F.M., J.N., F.P., D.P.) and Musculoskeletal Radiology Section (K.W.), TUM School of Medicine, Klinikum rechts der Isar, Technical University of Munich, Munich, Germany; and TUM Institute for Advanced Study, Technical University of Munich, Garching, Germany (J.T., F.P., D.P.)
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Tang R, Goethals W, Organista C, Van Hoorebeke L, Stampanoni M, Aelterman J, Boone MN. Method for auto-alignment and determination of parameter space in dual-phase grating interferometry. OPTICS EXPRESS 2024; 32:14607-14619. [PMID: 38859401 DOI: 10.1364/oe.518821] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/12/2024] [Accepted: 03/08/2024] [Indexed: 06/12/2024]
Abstract
X-ray dual-phase grating interferometry provides quantitative micro-structural information beyond the optical resolution through its tunable correlation length. Ensuring optimal performance of the set-up requires accurate correlation length estimation and precise alignment of the gratings. This paper presents an automated procedure for determining the complete geometrical parameters of the interferometer set-up with a high degree of precision. The algorithm's effectiveness is then evaluated through a series of experimental tests, illustrating its accuracy and robustness.
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5
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De Marco F, Andrejewski J, Urban T, Willer K, Gromann L, Koehler T, Maack HI, Herzen J, Pfeiffer F. X-Ray Dark-Field Signal Reduction Due to Hardening of the Visibility Spectrum. IEEE TRANSACTIONS ON MEDICAL IMAGING 2024; 43:1422-1433. [PMID: 38032773 DOI: 10.1109/tmi.2023.3337994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2023]
Abstract
X-ray dark-field imaging enables a spatially-resolved visualization of ultra-small-angle X-ray scattering. Using phantom measurements, we demonstrate that a material's effective dark-field signal may be reduced by modification of the visibility spectrum by other dark-field-active objects in the beam. This is the dark-field equivalent of conventional beam-hardening, and is distinct from related, known effects, where the dark-field signal is modified by attenuation or phase shifts. We present a theoretical model for this group of effects and verify it by comparison to the measurements. These findings have significant implications for the interpretation of dark-field signal strength in polychromatic measurements.
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6
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John D, Gottwald W, Berthe D, Wirtensohn S, Hickler J, Heck L, Herzen J. X-ray dark-field computed tomography for monitoring of tissue freezing. Sci Rep 2024; 14:5599. [PMID: 38454107 PMCID: PMC10920745 DOI: 10.1038/s41598-024-56201-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2023] [Accepted: 03/04/2024] [Indexed: 03/09/2024] Open
Abstract
Accurately monitoring the extent of freezing in biological tissue is an important requirement for cryoablation, a minimally invasive cancer treatment that induces cell death by freezing tissue with a cryoprobe. During the procedure, monitoring is required to avoid unnecessary harm to the surrounding healthy tissue and to ensure the tumor is properly encapsulated. One commonly used monitoring method is attenuation-based computed tomography (CT), which visualizes the ice ball by utilizing its hypoattenuating properties compared to unfrozen tissue. However, the contrast between frozen and unfrozen tissue remains low. In a proof-of-principle experiment, we show that the contrast between frozen and unfrozen parts of a porcine phantom mimicking breast tissue can be greatly enhanced by acquiring X-ray dark-field images that capture the increasing small-angle scattering caused by the ice crystals formed during the procedure. Our results show that, compared to X-ray attenuation, the frozen region is detected significantly better in dark-field radiographs and CT scans of the phantom. These findings demonstrate that X-ray dark-field imaging could be a potential candidate for improved monitoring of cryoablation procedures.
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Affiliation(s)
- Dominik John
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany.
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany.
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Germany.
- Institute of Materials Physics, Helmholtz-Zentrum hereon, 21502, Geesthacht, Germany.
| | - Wolfgang Gottwald
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Germany
| | - Daniel Berthe
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Germany
| | - Sami Wirtensohn
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Germany
- Institute of Materials Physics, Helmholtz-Zentrum hereon, 21502, Geesthacht, Germany
| | - Julia Hickler
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Germany
| | - Lisa Heck
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Germany
| | - Julia Herzen
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Germany
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7
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Bertilson M, von Hofsten O, Maltz JS, Taphorn K, Herzen J, Danielsson M. Analyzer-free hard x-ray interferometry. Phys Med Biol 2024; 69:045011. [PMID: 38232393 DOI: 10.1088/1361-6560/ad1f84] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2023] [Accepted: 01/17/2024] [Indexed: 01/19/2024]
Abstract
Objective. To enable practical interferometry-based phase contrast CT using standard incoherent x-ray sources, we propose an imaging system where the analyzer grating is replaced by a high-resolution detector. Since there is no need to perform multiple exposures (with the analyzer grating at different positions) at each scan angle, this scheme is compatible with continuous-rotation CT apparatus, and has the potential to reduce patient radiation dose and patient motion artifacts.Approach. Grating-based x-ray interferometry is a well-studied technique for imaging soft tissues and highly scattering objects embedded in such tissues. In addition to the traditional x-ray absorption-based image, this technique allows reconstruction of the object phase and small-angle scattering information. When using conventional incoherent, polychromatic, hard x-ray tubes as sources, three gratings are usually employed. To sufficiently resolve the pattern generated in these interferometers with contemporary x-ray detectors, an analyzer grating is used, and consequently multiple images need to be acquired for each view angle. This adds complexity to the imaging system, slows image acquisition and thus increases sensitivity to patient motion, and is not dose efficient. By simulating image formation based on wave propagation, and proposing a novel phase retrieval algorithm based on a virtual grating, we assess the potential of a analyzer-grating-free system to overcome these limitations.Main results. We demonstrate that the removal of the analyzer-grating can produce equal image contrast-to-noise ratio at reduced dose (by a factor of 5), without prolonging scan duration.Significance.By demonstrating that an analyzer-free CT system, in conjuction with an efficient phase retrieval algorithm, can overcome the prohibitive dose and workflow penalties associated grating-stepping, an alternative path towards realizing clinical inteferometric CT appears possible.
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Affiliation(s)
- M Bertilson
- Eclipse Optics, Vasagatan 52, Stockholm, Sweden
| | | | - J S Maltz
- GE HealthCare, Waukesha, WI, United States of America
| | - K Taphorn
- Munich Institute of Biomedical Engineering, Technical University of Munich, D-85748, Garching, Germany
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, D-85748 Garching, Germany
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, D-85748 Garching, Germany
| | - J Herzen
- Munich Institute of Biomedical Engineering, Technical University of Munich, D-85748, Garching, Germany
- Chair of Biomedical Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, D-85748 Garching, Germany
- Research Group Biomedical Imaging Physics, Department of Physics, TUM School of Natural Sciences, Technical University of Munich, D-85748 Garching, Germany
| | - M Danielsson
- KTH Royal Institute of Technology, Department of Physics, Stockholm, Sweden
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8
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Leatham TA, Paganin DM, Morgan KS. X-ray phase and dark-field computed tomography without optical elements. OPTICS EXPRESS 2024; 32:4588-4602. [PMID: 38297656 DOI: 10.1364/oe.509604] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Accepted: 12/07/2023] [Indexed: 02/02/2024]
Abstract
X-ray diffusive dark-field imaging, which allows spatially unresolved microstructure to be mapped across a sample, is an increasingly popular tool in an array of settings. Here, we present a new algorithm for phase and dark-field computed tomography based on the x-ray Fokker-Planck equation. Needing only a coherent x-ray source, sample, and detector, our propagation-based algorithm can map the sample density and dark-field/diffusion properties of the sample in 3D. Importantly, incorporating dark-field information in the density reconstruction process enables a higher spatial resolution reconstruction than possible with previous propagation-based approaches. Two sample exposures at each projection angle are sufficient for the successful reconstruction of both the sample density and dark-field Fokker-Planck diffusion coefficients. We anticipate that the proposed algorithm may be of benefit in biomedical imaging and industrial settings.
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9
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Guo P, Zhang L, Lu J, Zhang H, Zhu X, Wu C, Zhan X, Yin H, Wang Z, Xu Y, Wang Z. Grating-based x-ray dark-field CT for lung cancer diagnosis in mice. Eur Radiol Exp 2024; 8:12. [PMID: 38270720 PMCID: PMC10810771 DOI: 10.1186/s41747-023-00399-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2023] [Accepted: 10/20/2023] [Indexed: 01/26/2024] Open
Abstract
BACKGROUND The low absorption of x-rays in lung tissue and the poor resolution of conventional computed tomography (CT) limits its use to detect lung disease. However, x-ray dark-field imaging can sense the scattered x-rays deflected by the structures being imaged. This technique can facilitate the detection of small alveolar lesions that would be difficult to detect with conventional CT. Therefore, it may provide an alternative imaging modality to diagnose lung disease at an early stage. METHODS Eight mice were inoculated with lung cancers simultaneously. Each time two mice were scanned using a grating-based dark-field CT on days 4, 8, 12, and 16 after the introduction of the cancer cells. The detectability index was calculated between nodules and healthy parenchyma for both attenuation and dark-field modalities. High-resolution micro-CT and pathological examinations were used to crosscheck and validate our results. Paired t-test was used for comparing the ability of dark-field and attenuation modalities in pulmonary nodule detection. RESULTS The nodules were shown as a signal decrease in the dark-field modality and a signal increase in the attenuation modality. The number of nodules increased from day 8 to day 16, indicating disease progression. The detectability indices of dark-field modality were higher than those of attenuation modality (p = 0.025). CONCLUSIONS Compared with the standard attenuation CT, the dark-field CT improved the detection of lung nodules. RELEVANCE STATEMENT Dark-field CT has a higher detectability index than conventional attenuation CT in lung nodule detection. This technique could improve the early diagnosis of lung cancer. KEY POINTS • Lung cancer progression was observed using x-ray dark-field CT. • Dark-field modality complements with attenuation modality in lung nodule detection. • Dark-field modality showed a detectability index higher than that attenuation in nodule detection.
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Affiliation(s)
- Peiyuan Guo
- Department of Engineering Physics, Tsinghua University, Beijing, China
- Key Laboratory of Particle & Radiation Imaging (Tsinghua University) of Ministry of Education, Beijing, China
- Institute for Precision Medicine, Tsinghua University, Beijing, China
| | - Li Zhang
- Department of Engineering Physics, Tsinghua University, Beijing, China
- Key Laboratory of Particle & Radiation Imaging (Tsinghua University) of Ministry of Education, Beijing, China
- Institute for Precision Medicine, Tsinghua University, Beijing, China
| | - Jincheng Lu
- Department of Engineering Physics, Tsinghua University, Beijing, China
- Key Laboratory of Particle & Radiation Imaging (Tsinghua University) of Ministry of Education, Beijing, China
- Institute for Precision Medicine, Tsinghua University, Beijing, China
| | - Huitao Zhang
- School of Mathematical Sciences, Capital Normal University, Beijing, China
| | - Xiaohua Zhu
- Department of Engineering Physics, Tsinghua University, Beijing, China
- Key Laboratory of Particle & Radiation Imaging (Tsinghua University) of Ministry of Education, Beijing, China
| | - Chengpeng Wu
- Department of Engineering Physics, Tsinghua University, Beijing, China
- Key Laboratory of Particle & Radiation Imaging (Tsinghua University) of Ministry of Education, Beijing, China
| | - Xiangwen Zhan
- NHC Key Laboratory of Human Disease Comparative Medicine, Beijing Engineering Research Center for Experimental Animal Models of Human Critical Diseases, Institute of Laboratory Animal Sciences, Chinese Academy of Medical Sciences (CAMS) and Comparative Medicine Center, Peking Union Medical College (PUMC), Beijing, China
| | - Hongxia Yin
- Department of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, China
| | - Zhenchang Wang
- Department of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, China
| | - Yan Xu
- Department of Radiology, Beijing Friendship Hospital, Capital Medical University, Beijing, China.
| | - Zhentian Wang
- Department of Engineering Physics, Tsinghua University, Beijing, China.
- Key Laboratory of Particle & Radiation Imaging (Tsinghua University) of Ministry of Education, Beijing, China.
- Institute for Precision Medicine, Tsinghua University, Beijing, China.
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10
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Organista C, Tang R, Shi Z, Jefimovs K, Josell D, Romano L, Spindler S, Kibleur P, Blykers B, Stampanoni M, Boone MN. Implementation of a dual-phase grating interferometer for multi-scale characterization of building materials by tunable dark-field imaging. Sci Rep 2024; 14:384. [PMID: 38172504 PMCID: PMC10764912 DOI: 10.1038/s41598-023-50424-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Accepted: 12/19/2023] [Indexed: 01/05/2024] Open
Abstract
The multi-scale characterization of building materials is necessary to understand complex mechanical processes, with the goal of developing new more sustainable materials. To that end, imaging methods are often used in materials science to characterize the microscale. However, these methods compromise the volume of interest to achieve a higher resolution. Dark-field (DF) contrast imaging is being investigated to characterize building materials in length scales smaller than the resolution of the imaging system, allowing a direct comparison of features in the nano-scale range and overcoming the scale limitations of the established characterization methods. This work extends the implementation of a dual-phase X-ray grating interferometer (DP-XGI) for DF imaging in a lab-based setup. The interferometer was developed to operate at two different design energies of 22.0 keV and 40.8 keV and was designed to characterize nanoscale-size features in millimeter-sized material samples. The good performance of the interferometer in the low energy range (LER) is demonstrated by the DF retrieval of natural wood samples. In addition, a high energy range (HER) configuration is proposed, resulting in higher mean visibility and good sensitivity over a wider range of correlation lengths in the nanoscale range. Its potential for the characterization of mineral building materials is illustrated by the DF imaging of a Ketton limestone. Additionally, the capability of the DP-XGI to differentiate features in the nanoscale range is proven with the dark-field of Silica nanoparticles at different correlation lengths of calibrated sizes of 106 nm, 261 nm, and 507 nm.
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Affiliation(s)
- Caori Organista
- Radiation Physics Research group, Department Physics and Astronomy, Ghent University, 9000, Ghent, Belgium.
- Centre for X-ray Tomography, Ghent University, 9000, Ghent, Belgium.
- UGent‑Woodlab, Department of Environment, Faculty of Bioscience Engineering, Ghent University, 9000, Ghent, Belgium.
- Pore-Scale Processes in Geomaterials Research Group (PProGRess), Department of Geology, Ghent University, 9000, Ghent, Belgium.
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland.
| | - Ruizhi Tang
- Radiation Physics Research group, Department Physics and Astronomy, Ghent University, 9000, Ghent, Belgium
- Centre for X-ray Tomography, Ghent University, 9000, Ghent, Belgium
| | - Zhitian Shi
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
- Swiss Light Source, Paul Scherrer Institute, Villigen, 5232, Switzerland
| | | | - Daniel Josell
- Materials Science and Engineering Division, National Institute of Standards and Technology, Gaithersburg, MD, USA
| | - Lucia Romano
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
- Swiss Light Source, Paul Scherrer Institute, Villigen, 5232, Switzerland
| | - Simon Spindler
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
- Swiss Light Source, Paul Scherrer Institute, Villigen, 5232, Switzerland
| | - Pierre Kibleur
- Centre for X-ray Tomography, Ghent University, 9000, Ghent, Belgium
- UGent‑Woodlab, Department of Environment, Faculty of Bioscience Engineering, Ghent University, 9000, Ghent, Belgium
| | - Benjamin Blykers
- Centre for X-ray Tomography, Ghent University, 9000, Ghent, Belgium
- Pore-Scale Processes in Geomaterials Research Group (PProGRess), Department of Geology, Ghent University, 9000, Ghent, Belgium
| | - Marco Stampanoni
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
- Swiss Light Source, Paul Scherrer Institute, Villigen, 5232, Switzerland
| | - Matthieu N Boone
- Radiation Physics Research group, Department Physics and Astronomy, Ghent University, 9000, Ghent, Belgium
- Centre for X-ray Tomography, Ghent University, 9000, Ghent, Belgium
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11
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Savatović S, Zdora MC, De Marco F, Bikis C, Olbinado M, Rack A, Müller B, Thibault P, Zanette I. Multi-resolution X-ray phase-contrast and dark-field tomography of human cerebellum with near-field speckles. BIOMEDICAL OPTICS EXPRESS 2024; 15:142-161. [PMID: 38223169 PMCID: PMC10783905 DOI: 10.1364/boe.502664] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/01/2023] [Revised: 10/30/2023] [Accepted: 11/09/2023] [Indexed: 01/16/2024]
Abstract
In this study, we use synchrotron-based multi-modal X-ray tomography to examine human cerebellar tissue in three dimensions at two levels of spatial resolution (2.3 µm and 11.9 µm). We show that speckle-based imaging (SBI) produces results that are comparable to propagation-based imaging (PBI), a well-established phase-sensitive imaging method. The different SBI signals provide complementary information, which improves tissue differentiation. In particular, the dark-field signal aids in distinguishing tissues with similar average electron density but different microstructural variations. The setup's high resolution and the imaging technique's excellent phase sensitivity enabled the identification of different cellular layers and additionally, different cell types within these layers. We also correlated this high-resolution phase-contrast information with measured dark-field signal levels. These findings demonstrate the viability of SBI and the potential benefit of the dark-field modality for virtual histology of brain tissue.
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Affiliation(s)
- Sara Savatović
- Department of Physics, University of Trieste, Via Valerio 2, 34127 Trieste, Italy
- Elettra-Sincrotrone Trieste, Strada Statale 14 – km 163.5, 34149 Basovizza, Italy
| | - Marie-Christine Zdora
- Department of Biomedical Engineering, ETH Zürich, Gloriastrasse 35, 8092 Zürich, Switzerland
- Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen PSI, Switzerland
| | - Fabio De Marco
- Department of Physics, University of Trieste, Via Valerio 2, 34127 Trieste, Italy
- Elettra-Sincrotrone Trieste, Strada Statale 14 – km 163.5, 34149 Basovizza, Italy
| | - Christos Bikis
- Psychiatric Hospital in Winterthur, Wieshofstrasse 102, 8408 Winterthur, Switzerland
- Biomaterials Science Center, Department of Biomedical Engineering, University of Basel, Hegenheimermattweg 167 B/C, 4123 Allschwil, Switzerland
| | - Margie Olbinado
- Paul Scherrer Institut, Forschungsstrasse 111, 5232 Villigen PSI, Switzerland
| | - Alexander Rack
- ESRF – The European Synchrotron, CS40220, CEDEX 09, 38043 Grenoble, France
| | - Bert Müller
- Biomaterials Science Center, Department of Biomedical Engineering, University of Basel, Hegenheimermattweg 167 B/C, 4123 Allschwil, Switzerland
| | - Pierre Thibault
- Department of Physics, University of Trieste, Via Valerio 2, 34127 Trieste, Italy
- Elettra-Sincrotrone Trieste, Strada Statale 14 – km 163.5, 34149 Basovizza, Italy
| | - Irene Zanette
- Elettra-Sincrotrone Trieste, Strada Statale 14 – km 163.5, 34149 Basovizza, Italy
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12
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Tao S, Tian Z, Bai L, Xu Y, Kuang C, Liu X. Phase retrieval for X-ray differential phase contrast radiography with knowledge transfer learning from virtual differential absorption model. Comput Biol Med 2024; 168:107711. [PMID: 37995534 DOI: 10.1016/j.compbiomed.2023.107711] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 10/31/2023] [Accepted: 11/15/2023] [Indexed: 11/25/2023]
Abstract
Grating-based X-ray phase contrast radiography and computed tomography (CT) are promising modalities for future medical applications. However, the ill-posed phase retrieval problem in X-ray phase contrast imaging has hindered its use for quantitative analysis in biomedical imaging. Deep learning has been proved as an effective tool for image retrieval. However, in practical grating-based X-ray phase contrast imaging system, acquiring the ground truth of phase to form image pairs is challenging, which poses a great obstacle for using deep leaning methods. Transfer learning is widely used to address the problem with knowledge inheritance from similar tasks. In the present research, we propose a virtual differential absorption model and generate a training dataset with differential absorption images and absorption images. The knowledge learned from the training is transferred to phase retrieval with transfer learning techniques. Numerical simulations and experiments both demonstrate its feasibility. Image quality of retrieved phase radiograph and phase CT slices is improved when compared with representative phase retrieval methods. We conclude that this method is helpful in both X-ray 2D and 3D imaging and may find its applications in X-ray phase contrast radiography and X-ray phase CT.
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Affiliation(s)
- Siwei Tao
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Zonghan Tian
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Ling Bai
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China
| | - Yueshu Xu
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China; State Key Laboratory of Extreme Photonics and Instrumentation, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou, 315100, China
| | - Cuifang Kuang
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China; State Key Laboratory of Extreme Photonics and Instrumentation, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou, 315100, China; Collaborative Innovation Center of Extreme Optics, Shanxi University, Taiyuan, 030006, China.
| | - Xu Liu
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou, 310027, China; State Key Laboratory of Extreme Photonics and Instrumentation, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou, 315100, China; Ningbo Research Institute, Zhejiang University, Ningbo, 315100, China.
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13
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Zong F, Yang J, Jiang J, Guo J. The mechanism of moire artifacts in single-grating imaging systems and image quality optimization. JOURNAL OF X-RAY SCIENCE AND TECHNOLOGY 2024; 32:461-473. [PMID: 38189734 DOI: 10.3233/xst-230202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/09/2024]
Abstract
In the X-ray single-grating imaging system, the acquisition of frequency information is the key step of phase-contrast and scattering information recovery. In the process of information extraction, it is easy to lead to the degradation of imaging quality due to the Moire Artifact, thus limiting the development and application of X-ray single-grating imaging system. In order to address the above problems, in this article, based on the theoretical analysis of the generation principle of Moire Artifact in imaging system, the advantages and disadvantages of grating rotation method are analyzed, and a method of suppressing Moire artifacts by adjusting grating projection frequency is proposed. The experimental results show that the method proposed here can suppress the Moire noise in the background noise, resulting in a reduction of more than 50% in the standard deviation of the background noise. High quality phase-contrast and scattering images are obtained experimentally, which is of great value to the development of X-ray single-grating imaging technology.
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Affiliation(s)
- Fangke Zong
- College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen, Guangdong, China
- Institute of Advanced Science Facilities, Shenzhen, Guangdong, China
| | - Jun Yang
- Institute of Advanced Science Facilities, Shenzhen, Guangdong, China
| | - Jun Jiang
- College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen, Guangdong, China
| | - JinChuan Guo
- College of Physics and Optoelectronic Engineering, Shenzhen University, Shenzhen, Guangdong, China
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14
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Cai X, Tan Y, Zhang X, Yang J, Xu J, Zheng H, Liang D, Ge Y. Energy resolving dark-field imaging with dual phase grating interferometer. OPTICS EXPRESS 2023; 31:44273-44282. [PMID: 38178502 DOI: 10.1364/oe.503843] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Accepted: 11/14/2023] [Indexed: 01/06/2024]
Abstract
X-ray dark-filed imaging is a powerful approach to quantify the dimension of micro-structures of the object. Often, a series of dark-filed signals have to be measured under various correlation lengths. For instance, this is often achieved by adjusting the sample positions by multiple times in Talbot-Lau interferometer. Moreover, such multiple measurements can also be collected via adjustments of the inter-space between the phase gratings in dual phase grating interferometer. In this study, the energy resolving capability of the dual phase grating interferometer is explored with the aim to accelerate the data acquisition speed of dark-filed imaging. To do so, both theoretical analyses and numerical simulations are investigated. Specifically, the responses of the dual phase grating interferometer at varied X-ray beam energies are studied. Compared with the mechanical position translation approach, the combination of such energy resolving capability helps to greatly shorten the total dark-field imaging time in dual phase grating interferometer.
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15
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Tang R, Organista C, Romano L, Van Hoorebeke L, Stampanoni M, Aelterman J, Boone MN. Pixel-wise beam-hardening correction for dark-field signal in X-ray dual-phase grating interferometry. OPTICS EXPRESS 2023; 31:40450-40468. [PMID: 38041345 DOI: 10.1364/oe.499397] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Accepted: 09/18/2023] [Indexed: 12/03/2023]
Abstract
The dark-field signal provided by X-ray grating interferometry is an invaluable tool for providing structural information beyond the direct spatial resolution and their variations on a macroscopic scale. However, when using a polychromatic source, the beam-hardening effect in the dark-field signal makes the quantitative sub-resolution structural information inaccessible. Especially, the beam-hardening effect in dual-phase grating interferometry varies with spatial location, inter-grating distance, and diffraction order. In this work, we propose a beam-hardening correction algorithm, taking into account all these factors. The accuracy and robustness of the algorithm are then validated by experimental results. This work contributes a necessary step toward accessing small-angle scattering structural information in dual-phase grating interferometry.
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16
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Magnin C, Quénot L, Bohic S, Mihai Cenda D, Fernández Martínez M, Lantz B, Faure B, Brun E. Dark-field and directional dark-field on low-coherence x ray sources with random mask modulations: validation with SAXS anisotropy measurements. OPTICS LETTERS 2023; 48:5839-5842. [PMID: 37966732 DOI: 10.1364/ol.501716] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2023] [Accepted: 10/15/2023] [Indexed: 11/16/2023]
Abstract
Phase-contrast imaging, dark-field, and directional dark-field imaging are recent x ray imaging modalities that have been demonstrated to reveal different information and contrast from those provided by conventional x ray imaging. Access to these new types of images is currently limited because the acquisitions require coherent sources such as synchrotron radiation or complicated optical setups. This Letter demonstrates the possibility of efficiently performing phase-contrast, dark-field, and directional dark-field imaging on a low-coherence laboratory system equipped with a conventional x ray tube, using a simple, fast, and robust single-mask technique.
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17
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Peiffer C, Brombal L, Maughan Jones CJ, Arfelli F, Astolfo A, Dreossi D, Endrizzi M, Hagen CK, Mazzolani A, Menk R, Rigon L, Olivo A, Munro PRT. On the equivalence of the X-ray scattering retrieval with beam tracking and analyser-based imaging using a synchrotron source. JOURNAL OF PHYSICS D: APPLIED PHYSICS 2023; 56:45LT02. [PMID: 37601626 PMCID: PMC10437003 DOI: 10.1088/1361-6463/acee8c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2023] [Revised: 07/25/2023] [Accepted: 08/09/2023] [Indexed: 08/22/2023]
Abstract
X-ray phase contrast imaging (XPCI) methods give access to contrast mechanisms that are based on the refractive properties of matter on top of the absorption coefficient in conventional x-ray imaging. Ultra small angle x-ray scattering (USAXS) is a phase contrast mechanism that arises due to multiple refraction events caused by physical features of a scale below the physical resolution of the used imaging system. USAXS contrast can therefore give insight into subresolution structural information, which is an ongoing research topic in the vast field of different XPCI techniques. In this study, we quantitatively compare the USAXS signal retrieved by the beam tracking XPCI technique with the gold standard of the analyzer based imaging XPCI technique using a synchrotron x-ray source. We find that, provided certain conditions are met, the two methods measure the same quantity.
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Affiliation(s)
- C Peiffer
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, WC1E 6BT London, United Kingdom
| | - L Brombal
- Department of Physics, University of Trieste, Via Valerio 2, 34127 Trieste, Italy
- Istituto Nazionale di Fisica Nucleare, Sezione di Trieste, Via Valerio 2, 34127 Trieste, Italy
| | - C J Maughan Jones
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, WC1E 6BT London, United Kingdom
| | - F Arfelli
- Department of Physics, University of Trieste, Via Valerio 2, 34127 Trieste, Italy
- Istituto Nazionale di Fisica Nucleare, Sezione di Trieste, Via Valerio 2, 34127 Trieste, Italy
| | - A Astolfo
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, WC1E 6BT London, United Kingdom
| | - D Dreossi
- Elettra Sincrotrone Trieste SCpA, S. S. 14 km 163.5, 34012 Basovizza (TS), Italy
| | - M Endrizzi
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, WC1E 6BT London, United Kingdom
| | - C K Hagen
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, WC1E 6BT London, United Kingdom
| | - A Mazzolani
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, WC1E 6BT London, United Kingdom
| | - R Menk
- Istituto Nazionale di Fisica Nucleare, Sezione di Trieste, Via Valerio 2, 34127 Trieste, Italy
- Elettra Sincrotrone Trieste SCpA, S. S. 14 km 163.5, 34012 Basovizza (TS), Italy
- Department of Computer and Electrical Engineering, Midsweden University, Sundsvall, Sweden
| | - L Rigon
- Department of Physics, University of Trieste, Via Valerio 2, 34127 Trieste, Italy
- Istituto Nazionale di Fisica Nucleare, Sezione di Trieste, Via Valerio 2, 34127 Trieste, Italy
| | - A Olivo
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, WC1E 6BT London, United Kingdom
| | - P R T Munro
- Department of Medical Physics and Biomedical Engineering, University College London, Gower Street, WC1E 6BT London, United Kingdom
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18
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Ge X, Yang P, Wu Z, Luo C, Jin P, Wang Z, Wang S, Huang Y, Niu T. Virtual differential phase-contrast and dark-field imaging of x-ray absorption images via deep learning. Bioeng Transl Med 2023; 8:e10494. [PMID: 38023711 PMCID: PMC10658538 DOI: 10.1002/btm2.10494] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 12/22/2022] [Accepted: 01/04/2023] [Indexed: 01/21/2023] Open
Abstract
Weak absorption contrast in biological tissues has hindered x-ray computed tomography from accessing biological structures. Recently, grating-based imaging has emerged as a promising solution to biological low-contrast imaging, providing complementary and previously unavailable structural information of the specimen. Although it has been successfully applied to work with conventional x-ray sources, grating-based imaging is time-consuming and requires a sophisticated experimental setup. In this work, we demonstrate that a deep convolutional neural network trained with a generative adversarial network can directly convert x-ray absorption images into differential phase-contrast and dark-field images that are comparable to those obtained at both a synchrotron beamline and a laboratory facility. By smearing back all of the virtual projections, high-quality tomographic images of biological test specimens deliver the differential phase-contrast- and dark-field-like contrast and quantitative information, broadening the horizon of x-ray image contrast generation.
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Affiliation(s)
- Xin Ge
- School of Science, Shenzhen Campus of Sun Yat‐sen UniversityShenzhenGuangdongChina
- Institute of Biomedical EngineeringShenzhen Bay LaboratoryShenzhenGuangdongChina
| | - Pengfei Yang
- College of Biomedical Engineering and Instrument Science, Zhejiang UniversityHangzhouZhejiangChina
| | - Zhao Wu
- National Synchrotron Radiation LaboratoryUniversity of Science and Technology of ChinaHefeiAnhuiChina
| | - Chen Luo
- Institute of Biomedical EngineeringShenzhen Bay LaboratoryShenzhenGuangdongChina
| | - Peng Jin
- Institute of Biomedical EngineeringShenzhen Bay LaboratoryShenzhenGuangdongChina
| | - Zhili Wang
- Department of Optical EngineeringSchool of Physics, Hefei University of TechnologyHefeiAnhuiChina
| | - Shengxiang Wang
- Spallation Neutron Source Science CenterDongguanGuangdongChina
- Institute of High Energy Physics, Chinese Academy of SciencesBeijingChina
| | - Yongsheng Huang
- School of Science, Shenzhen Campus of Sun Yat‐sen UniversityShenzhenGuangdongChina
| | - Tianye Niu
- Institute of Biomedical EngineeringShenzhen Bay LaboratoryShenzhenGuangdongChina
- Peking University Aerospace School of Clinical Medicine, Aerospace Center HospitalBeijingChina
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19
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Urban T, Sauter AP, Frank M, Willer K, Noichl W, Bast H, Schick R, Herzen J, Koehler T, Gassert FT, Bodden JH, Fingerle AA, Gleich B, Renger B, Makowski MR, Pfeiffer F, Pfeiffer D. Dark-Field Chest Radiography Outperforms Conventional Chest Radiography for the Diagnosis and Staging of Pulmonary Emphysema. Invest Radiol 2023; 58:775-781. [PMID: 37276130 PMCID: PMC10581407 DOI: 10.1097/rli.0000000000000989] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Accepted: 03/28/2023] [Indexed: 06/07/2023]
Abstract
OBJECTIVES Dark-field chest radiography (dfCXR) has recently reached clinical trials. Here we compare dfCXR to conventional radiography for the detection and staging of pulmonary emphysema. MATERIALS AND METHODS Subjects were included after a medically indicated computed tomography (CT) scan, showing either no lung impairments or different stages of emphysema. To establish a ground truth, all CT scans were assessed by 3 radiologists assigning emphysema severity scores based on the Fleischner Society classification scheme.Participants were imaged at a commercial chest radiography device and at a prototype for dfCXR, yielding both attenuation-based and dark-field images. Three radiologists blinded to CT score independently assessed images from both devices for presence and severity of emphysema (no, mild, moderate, severe).Statistical analysis included evaluation of receiver operating characteristic curves and pairwise comparison of adjacent Fleischner groups using an area under the curve (AUC)-based z test with a significance level of 0.05. RESULTS A total of 88 participants (54 men) with a mean age of 64 ± 12 years were included. Compared with conventional images (AUC = 0.73), readers were better able to identify emphysema with images from the dark-field prototype (AUC = 0.85, P = 0.005). Although ratings of adjacent emphysema severity groups with conventional radiographs differed only for trace and mild emphysema, ratings based on images from the dark-field prototype were different for trace and mild, mild and moderate, and moderate and confluent emphysema. CONCLUSIONS Dark-field chest radiography is superior to conventional chest radiography for emphysema diagnosis and staging, indicating the technique's potential as a low-dose diagnostic tool for emphysema assessment.
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Esposito M, Astolfo A, Cipiccia S, Jones CM, Savvidis S, Ferrara JD, Endrizzi M, Dudhia J, Olivo A. Technical note: Cartilage imaging with sub-cellular resolution using a laboratory-based phase-contrast x-ray microscope. Med Phys 2023; 50:6130-6136. [PMID: 37431640 PMCID: PMC10947188 DOI: 10.1002/mp.16599] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Revised: 05/10/2023] [Accepted: 06/12/2023] [Indexed: 07/12/2023] Open
Abstract
BACKGROUND Microscopic imaging of cartilage is a key tool for the study and development of treatments for osteoarthritis. When cellular and sub-cellular resolution is required, histology remains the gold standard approach, albeit limited by the lack of volumetric information as well as by processing artifacts. Cartilage imaging with the sub-cellular resolution has only been demonstrated in the synchrotron environment. PURPOSE To provide a proof-of-concept demonstration of the capability of a laboratory-based x-ray phase-contrast microscope to resolve sub-cellular features in a cartilage sample. METHODS This work is based on a laboratory-based x-ray microscope using intensity-modulation masks. The structured nature of the beam, resulting from the mask apertures, allows the retrieval of three contrast channels, namely, transmission, refraction and dark-field, with resolution depending only on the mask aperture width. An ex vivo equine cartilage sample was imaged with the x-ray microscope and results were validated with synchrotron tomography and histology. RESULTS Individual chondrocytes, that is, cells responsible for cartilage formation, could be detected with the laboratory-based microscope. The complementarity of the three retrieved contrast channels allowed the detection of sub-cellular features in the chondrocytes. CONCLUSIONS We provide the first proof-of-concept of imaging cartilage tissue with sub-cellular resolution using a laboratory-based x-ray microscope.
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Affiliation(s)
- Michela Esposito
- Department of Medical Physics and Biomedical EngineeringUniversity College LondonLondonUK
| | - Alberto Astolfo
- Department of Medical Physics and Biomedical EngineeringUniversity College LondonLondonUK
| | - Silvia Cipiccia
- Department of Medical Physics and Biomedical EngineeringUniversity College LondonLondonUK
- Diamond Light SourceHarwell Science and Innovation CampusDidcotUK
| | | | - Savvas Savvidis
- Department of Medical Physics and Biomedical EngineeringUniversity College LondonLondonUK
| | | | - Marco Endrizzi
- Department of Medical Physics and Biomedical EngineeringUniversity College LondonLondonUK
| | | | - Alessandro Olivo
- Department of Medical Physics and Biomedical EngineeringUniversity College LondonLondonUK
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21
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Blaskovic S, Anagnostopoulou P, Borisova E, Schittny D, Donati Y, Haberthür D, Zhou-Suckow Z, Mall MA, Schlepütz CM, Stampanoni M, Barazzone-Argiroffo C, Schittny JC. Airspace Diameter Map-A Quantitative Measurement of All Pulmonary Airspaces to Characterize Structural Lung Diseases. Cells 2023; 12:2375. [PMID: 37830589 PMCID: PMC10571657 DOI: 10.3390/cells12192375] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2023] [Revised: 08/21/2023] [Accepted: 09/20/2023] [Indexed: 10/14/2023] Open
Abstract
(1) Background: Stereological estimations significantly contributed to our understanding of lung anatomy and physiology. Taking stereology fully 3-dimensional facilitates the estimation of novel parameters. (2) Methods: We developed a protocol for the analysis of all airspaces of an entire lung. It includes (i) high-resolution synchrotron radiation-based X-ray tomographic microscopy, (ii) image segmentation using the free machine-learning tool Ilastik and ImageJ, and (iii) calculation of the airspace diameter distribution using a diameter map function. To evaluate the new pipeline, lungs from adult mice with cystic fibrosis (CF)-like lung disease (βENaC-transgenic mice) or mice with elastase-induced emphysema were compared to healthy controls. (3) Results: We were able to show the distribution of airspace diameters throughout the entire lung, as well as separately for the conducting airways and the gas exchange area. In the pathobiological context, we observed an irregular widening of parenchymal airspaces in mice with CF-like lung disease and elastase-induced emphysema. Comparable results were obtained when analyzing lungs imaged with μCT, sugges-ting that our pipeline is applicable to different kinds of imaging modalities. (4) Conclusions: We conclude that the airspace diameter map is well suited for a detailed analysis of unevenly distri-buted structural alterations in chronic muco-obstructive lung diseases such as cystic fibrosis and COPD.
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Affiliation(s)
- Sanja Blaskovic
- Institute of Anatomy, University of Bern, 3012 Bern, Switzerland; (S.B.); (E.B.); (D.S.); (D.H.)
| | | | - Elena Borisova
- Institute of Anatomy, University of Bern, 3012 Bern, Switzerland; (S.B.); (E.B.); (D.S.); (D.H.)
| | - Dominik Schittny
- Institute of Anatomy, University of Bern, 3012 Bern, Switzerland; (S.B.); (E.B.); (D.S.); (D.H.)
| | - Yves Donati
- Department of Pediatrics, Gynecology and Obstetrics, Faculty of Medicine, University of Geneva, 4 rue Gabrielle-Perret-Gentil, 1211 Genève, Switzerland; (Y.D.); (C.B.-A.)
- Department of Pathology and Immunology, Faculty of Medicine, University of Geneva, 1211 Geneva, Switzerland
| | - David Haberthür
- Institute of Anatomy, University of Bern, 3012 Bern, Switzerland; (S.B.); (E.B.); (D.S.); (D.H.)
| | - Zhe Zhou-Suckow
- Department of Translational Pulmonology, University Hospital Heidelberg, Translational Lung Research Center (TLRC), A Member of German Center for Lung Research (DZL), 69120 Heidelberg, Germany;
| | - Marcus A. Mall
- Department of Pediatric Respiratory Medicine, Immunology and Critical Care Medicine, Charité-Universitätsmedizin Berlin, 10115 Berlin, Germany;
- Berlin Institute of Health (BIH), Charité-Universitätsmedizin Berlin, 10115 Berlin, Germany
- German Center for Lung Research (DZL), Associated Partner Site, 10115 Berlin, Germany
| | - Christian M. Schlepütz
- Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland; (C.M.S.); (M.S.)
| | - Marco Stampanoni
- Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland; (C.M.S.); (M.S.)
- Institute for Biomedical Engineering, University and ETH Zürich, 8093 Zurich, Switzerland
| | - Constance Barazzone-Argiroffo
- Department of Pediatrics, Gynecology and Obstetrics, Faculty of Medicine, University of Geneva, 4 rue Gabrielle-Perret-Gentil, 1211 Genève, Switzerland; (Y.D.); (C.B.-A.)
- Department of Pathology and Immunology, Faculty of Medicine, University of Geneva, 1211 Geneva, Switzerland
| | - Johannes C. Schittny
- Institute of Anatomy, University of Bern, 3012 Bern, Switzerland; (S.B.); (E.B.); (D.S.); (D.H.)
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22
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Tao S, Tian Z, Bai L, Wang W, Xu Y, Kuang C, Liu X. Tri-directional x-ray phase contrast multimodal imaging using one hexagonal mesh modulator. Phys Med Biol 2023; 68:195017. [PMID: 37652041 DOI: 10.1088/1361-6560/acf5c3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Accepted: 08/31/2023] [Indexed: 09/02/2023]
Abstract
Objective. X-ray phase contrast imaging is a promising technique for future clinical diagnostic as it can provide enhanced contrast in soft tissues compared to traditional x-ray attenuation-contrast imaging. However, the strict requirements on the x-ray coherence and the precise alignment of optical elements limit its applications towards clinical use. To solve this problem, mesh-based x-ray phase contrast imaging method with one hexagonal mesh is proposed for easy alignment and better image visualization.Approach. The mesh produces structured illuminations and the detector captures its distortions to reconstruct the absorption, differential phase contrast (DPC) and dark-field (DF) images of the sample. In this work, we fabricated a hexagonal mesh to simultaneously retrieve DPC and DF signals in three different directions with single shot. A phase retrieval algorithm to obtain artifacts-free phase from DPC images with three different directions is put forward and false color dark-field image is also reconstructed with tri-directional images. Mesh-shifting method based on this hexagonal mesh modulator is also proposed to reconstruct images with better image quality at the expense of increased dose.Main results. In numerical simulations, the proposed hexagonal mesh outperforms the traditional square mesh in image evaluation metrics performance and false color visualization with the same radiation dose. The experimental results demonstrate its feasiblity in real imaging systems and its advantages in quantitive imaging and better visualization. The proposed hexagonal mesh is easy to fabricate and can be successfully applied to x-ray source with it spot size up to 300μm.Significance. This work opens new possibilities for quantitative x-ray non-destructive imaging and may also be instructive for research fields such as x-ray structured illumination microscopy (SIM), x-ray spectral imaging and x-ray phase contrast and dark-field computed tomography (CT).
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Affiliation(s)
- Siwei Tao
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou 310027, People's Republic of China
| | - Zonghan Tian
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou 310027, People's Republic of China
| | - Ling Bai
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou 310027, People's Republic of China
| | - Wei Wang
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou 310027, People's Republic of China
| | - Yueshu Xu
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou 310027, People's Republic of China
- State Key Laboratory of Extreme Photonics and Instrumentation, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou 315100, People's Republic of China
| | - Cuifang Kuang
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou 310027, People's Republic of China
- State Key Laboratory of Extreme Photonics and Instrumentation, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou 315100, People's Republic of China
- Collaborative Innovation Center of Extreme Optics, Shanxi University, Taiyuan 030006, People's Republic of China
| | - Xu Liu
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science and Engineering, Zhejiang University, Hangzhou 310027, People's Republic of China
- State Key Laboratory of Extreme Photonics and Instrumentation, ZJU-Hangzhou Global Scientific and Technological Innovation Center, Zhejiang University, Hangzhou 315100, People's Republic of China
- Ningbo Research Institute, Zhejiang University, Ningbo 315100, People's Republic of China
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Payne K, O'Bryan CA, Marcy JA, Crandall PG. Detection and prevention of foreign material in food: A review. Heliyon 2023; 9:e19574. [PMID: 37809834 PMCID: PMC10558841 DOI: 10.1016/j.heliyon.2023.e19574] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Revised: 08/22/2023] [Accepted: 08/26/2023] [Indexed: 10/10/2023] Open
Abstract
This review highlights the critical concern foreign material contamination poses across the food processing industry and provides information on methods and implementations to minimize the hazards caused by foreign materials. A foreign material is defined as any non-food, foreign bodies that may cause illness or injury to the consumer and are not typically part of the food. Foreign materials can enter the food processing plant as part of the raw materials such as fruit pits, bones, or contaminants like stones, insects, soil, grit, or pieces of harvesting equipment. Over the past 20 years, foreign materials have been responsible for about one out of ten recalls of foods, with plastic fragments being the most common complaint. The goal of this paper is to further the understanding of the risks foreign materials are to consumers and the tools that could be used to minimize the risk of foreign objects in foods.
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Affiliation(s)
- Keila Payne
- Food Safety and Quality Assurance, Tyson Foods, Springdale, AR, USA
| | - Corliss A. O'Bryan
- Department of Food Science, University of Arkansas, Fayetteville, AR, USA
| | - John A. Marcy
- Center of Excellence for Poultry Science, Dept. of Poultry Science, University of Arkansas, Fayetteville, AR, USA
| | - Philip G. Crandall
- Department of Food Science, University of Arkansas, Fayetteville, AR, USA
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24
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Kattau M, Willer K, Noichl W, Urban T, Frank M, De Marco F, Schick R, Koehler T, Maack HI, Renger B, Renz M, Sauter A, Leonhardt Y, Fingerle A, Makowski M, Pfeiffer D, Pfeiffer F. X-ray dark-field chest radiography: a reader study to evaluate the diagnostic quality of attenuation chest X-rays from a dual-contrast scanning prototype. Eur Radiol 2023; 33:5549-5556. [PMID: 36806571 PMCID: PMC10326144 DOI: 10.1007/s00330-023-09477-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2022] [Revised: 12/09/2022] [Accepted: 01/23/2023] [Indexed: 02/21/2023]
Abstract
OBJECTIVES To compare the visibility of anatomical structures and overall quality of the attenuation images obtained with a dark-field X-ray radiography prototype with those from a commercial radiography system. METHODS Each of the 65 patients recruited for this study obtained a thorax radiograph at the prototype and a reference radiograph at the commercial system. Five radiologists independently assessed the visibility of anatomical structures, the level of motion artifacts, and the overall image quality of all attenuation images on a five-point scale, with 5 points being the highest rating. The average scores were compared between the two image types. The differences were evaluated using an area under the curve (AUC) based z-test with a significance level of p ≤ 0.05. To assess the variability among the images, the distributions of the average scores per image were compared between the systems. RESULTS The overall image quality was rated high for both devices, 4.2 for the prototype and 4.6 for the commercial system. The rating scores varied only slightly between both image types, especially for structures relevant to lung assessment, where the images from the commercial system were graded slightly higher. The differences were statistically significant for all criteria except for the bronchial structures, the cardiophrenic recess, and the carina. CONCLUSIONS The attenuation images acquired with the prototype were assigned a high diagnostic quality despite a lower resolution and the presence of motion artifacts. Thus, the attenuation-based radiographs from the prototype can be used for diagnosis, eliminating the need for an additional conventional radiograph. KEY POINTS • Despite a low tube voltage (70 kVp) and comparably long acquisition time, the attenuation images from the dark-field chest radiography system achieved diagnostic quality for lung assessment. • Commercial chest radiographs obtained a mean rating score regarding their diagnostic quality of 4.6 out of 5, and the grating-based images had a slightly lower mean rating score of 4.2 out of 5. • The difference in rating scores for anatomical structures relevant to lung assessment is below 5%.
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Affiliation(s)
- Margarete Kattau
- Chair of Biomedical Physics, Munich Institute of Biomedical Engineering & School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany.
| | - Konstantin Willer
- Chair of Biomedical Physics, Munich Institute of Biomedical Engineering & School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Wolfgang Noichl
- Chair of Biomedical Physics, Munich Institute of Biomedical Engineering & School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
| | - Theresa Urban
- Chair of Biomedical Physics, Munich Institute of Biomedical Engineering & School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Manuela Frank
- Chair of Biomedical Physics, Munich Institute of Biomedical Engineering & School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Fabio De Marco
- Chair of Biomedical Physics, Munich Institute of Biomedical Engineering & School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
| | - Rafael Schick
- Chair of Biomedical Physics, Munich Institute of Biomedical Engineering & School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Thomas Koehler
- Philips Research, 22335, Hamburg, Germany
- Institute for Advanced Study, Technical University of Munich, 85748, Garching, Germany
| | | | - Bernhard Renger
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Martin Renz
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Andreas Sauter
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Yannik Leonhardt
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Alexander Fingerle
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Marcus Makowski
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
| | - Daniela Pfeiffer
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
- Institute for Advanced Study, Technical University of Munich, 85748, Garching, Germany
| | - Franz Pfeiffer
- Chair of Biomedical Physics, Munich Institute of Biomedical Engineering & School of Natural Sciences, Technical University of Munich, 85748, Garching, Germany
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum Rechts Der Isar, Technical University of Munich, 81675, Munich, Germany
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25
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Yao Y, Sun X, Ma Y, Wang T, Wu G, Chen H, Gao B, Wang C, Wu H, Zhang C, Qin Y. Perfect Talbot self-imaging effect of aperiodic gratings. OPTICS EXPRESS 2023; 31:26410-26417. [PMID: 37710503 DOI: 10.1364/oe.493060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2023] [Accepted: 07/02/2023] [Indexed: 09/16/2023]
Abstract
We propose and investigate a class of aperiodic grating structure which can achieve perfect Talbot effect under certain conditions. The aperiodic grating structure is obtained by the superposition of two or more sine terms. In the case of two sine terms, the Talbot effect can be realized when the period ratio of two terms is arbitrary. While in the case of more than two sine terms, the period ratios of each term must meet certain extra conditions. The theory has been further verified by numerical simulations. It expands the field of Talbot effect and is of potential significance for subsequent research applications such as optical imaging and measurement.
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26
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Gassert FT, Urban T, Kufner A, Frank M, Feuerriegel GC, Baum T, Makowski MR, Braun C, Pfeiffer D, Schwaiger BJ, Pfeiffer F, Gersing AS. Dark-field X-ray imaging for the assessment of osteoporosis in human lumbar spine specimens. Front Physiol 2023; 14:1217007. [PMID: 37534364 PMCID: PMC10393038 DOI: 10.3389/fphys.2023.1217007] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Accepted: 07/05/2023] [Indexed: 08/04/2023] Open
Abstract
Background: Dark-field imaging is a novel imaging modality that allows for the assessment of material interfaces by exploiting the wave character of x-ray. While it has been extensively studied in chest imaging, only little is known about the modality for imaging other tissues. Therefore, the purpose of this study was to evaluate whether a clinical X-ray dark-field scanner prototype allows for the assessment of osteoporosis. Materials and methods: In this prospective study we examined human cadaveric lumbar spine specimens (vertebral segments L2 to L4). We used a clinical prototype for dark-field radiography that yields both attenuation and dark-field images. All specimens were scanned in lateral orientation in vertical and horizontal position. All specimens were additionally imaged with CT as reference. Bone mineral density (BMD) values were derived from asynchronously calibrated quantitative CT measurements. Correlations between attenuation signal, dark-field signal and BMD were assessed using Spearman's rank correlation coefficients. The capability of the dark-field signal for the detection of osteoporosis/osteopenia was evaluated with receiver operating characteristics (ROC) curve analysis. Results: A total of 58 vertebrae from 20 human cadaveric spine specimens (mean age, 73 years ±13 [standard deviation]; 11 women) were studied. The dark-field signal was positively correlated with the BMD, both in vertical (r = 0.56, p < .001) and horizontal position (r = 0.43, p < .001). Also, the dark-field signal ratio was positively correlated with BMD (r = 0.30, p = .02). No correlation was found between the signal ratio of attenuation signal and BMD (r = 0.14, p = .29). For the differentiation between specimens with and without osteoporosis/osteopenia, the area under the ROC curve (AUC) was 0.80 for the dark-field signal in vertical position. Conclusion: Dark-field imaging allows for the differentiation between spine specimens with and without osteoporosis/osteopenia and may therefore be a potential biomarker for bone stability.
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Affiliation(s)
- Florian T. Gassert
- Department of Diagnostic and Interventional Radiology, School of Medicine and Klinikum Rechts der Isar, Technical University of Munich, Munich, Germany
| | - Theresa Urban
- Department of Diagnostic and Interventional Radiology, School of Medicine and Klinikum Rechts der Isar, Technical University of Munich, Munich, Germany
- Chair of Biomedical Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany
| | - Alexander Kufner
- Department of Diagnostic and Interventional Radiology, School of Medicine and Klinikum Rechts der Isar, Technical University of Munich, Munich, Germany
| | - Manuela Frank
- Department of Diagnostic and Interventional Radiology, School of Medicine and Klinikum Rechts der Isar, Technical University of Munich, Munich, Germany
- Chair of Biomedical Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany
| | - Georg C. Feuerriegel
- Department of Diagnostic and Interventional Radiology, School of Medicine and Klinikum Rechts der Isar, Technical University of Munich, Munich, Germany
| | - Thomas Baum
- Department of Neuroradiology, Klinikum Rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany
| | - Marcus R. Makowski
- Department of Diagnostic and Interventional Radiology, School of Medicine and Klinikum Rechts der Isar, Technical University of Munich, Munich, Germany
| | - Christian Braun
- Institute of Forensic Medicine, University Hospital of Munich, LMU Munich, Munich, Germany
| | - Daniela Pfeiffer
- Department of Diagnostic and Interventional Radiology, School of Medicine and Klinikum Rechts der Isar, Technical University of Munich, Munich, Germany
- Munich Institute for Advanced Study, Technical University of Munich, Garching, Germany
| | - Benedikt J. Schwaiger
- Department of Neuroradiology, Klinikum Rechts der Isar, School of Medicine, Technical University of Munich, Munich, Germany
| | - Franz Pfeiffer
- Department of Diagnostic and Interventional Radiology, School of Medicine and Klinikum Rechts der Isar, Technical University of Munich, Munich, Germany
- Chair of Biomedical Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, Garching, Germany
- Munich Institute of Biomedical Engineering, Technical University of Munich, Garching, Germany
- Munich Institute for Advanced Study, Technical University of Munich, Garching, Germany
| | - Alexandra S. Gersing
- Department of Neuroradiology, University Hospital of Munich, LMU Munich, Munich, Germany
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27
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Dierks H, Dreier T, Krüger R, Bech M, Wallentin J. Optimization of phase contrast imaging with a nano-focus x-ray tube. APPLIED OPTICS 2023; 62:5502-5507. [PMID: 37706868 DOI: 10.1364/ao.491669] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2023] [Accepted: 05/10/2023] [Indexed: 09/15/2023]
Abstract
Propagation-based phase contrast imaging with a laboratory x-ray source is a valuable tool for studying samples that show only low absorption contrast, either because of low density, elemental composition, or small feature size. If a propagation distance between sample and detector is introduced and the illumination is sufficiently coherent, the phase shift in the sample will cause additional contrast around interfaces, known as edge enhancement fringes. The strength of this effect depends not only on sample parameters and energy but also on the experimental geometry, which can be optimized accordingly. Recently, x-ray lab sources using transmission targets have become available, which provide very small source sizes in the few hundred nanometer range. This allows the use of a high-magnification geometry with a very short source-sample distance, while still achieving sufficient spatial coherence at the sample position. Moreover, the high geometrical magnification makes it possible to use detectors with a larger pixel size without reducing the image resolution. Here, we explore the influence of magnification on the edge enhancement fringes in such a geometry. We find experimentally and theoretically that the fringes become maximal at a magnification that is independent of the total source-detector distance. This optimal magnification only depends on the source size, the steepness of the sample feature, and the detector resolution. A stronger influence of the sample feature on the optimal magnification compared to low-magnification geometries is observed.
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28
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How YY, Paganin DM, Morgan KS. On the quantification of sample microstructure using single-exposure x-ray dark-field imaging via a single-grid setup. Sci Rep 2023; 13:11001. [PMID: 37419926 DOI: 10.1038/s41598-023-37334-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Accepted: 06/20/2023] [Indexed: 07/09/2023] Open
Abstract
The size of the smallest detectable sample feature in an x-ray imaging system is usually restricted by the spatial resolution of the system. This limitation can now be overcome using the diffusive dark-field signal, which is generated by unresolved phase effects or the ultra-small-angle x-ray scattering from unresolved sample microstructures. A quantitative measure of this dark-field signal can be useful in revealing the microstructure size or material for medical diagnosis, security screening and materials science. Recently, we derived a new method to quantify the diffusive dark-field signal in terms of a scattering angle using a single-exposure grid-based approach. In this manuscript, we look at the problem of quantifying the sample microstructure size from this single-exposure dark-field signal. We do this by quantifying the diffusive dark-field signal produced by 5 different sizes of polystyrene microspheres, ranging from 1.0 to 10.8 µm, to investigate how the strength of the extracted dark-field signal changes with the sample microstructure size, [Formula: see text]. We also explore the feasibility of performing single-exposure dark-field imaging with a simple equation for the optimal propagation distance, given microstructure with a specific size and thickness, and show consistency between this model and experimental data. Our theoretical model predicts that the dark-field scattering angle is inversely proportional to [Formula: see text], which is also consistent with our experimental data.
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Affiliation(s)
- Ying Ying How
- School of Physics and Astronomy, Monash University, Clayton, VIC, 3800, Australia.
| | - David M Paganin
- School of Physics and Astronomy, Monash University, Clayton, VIC, 3800, Australia
| | - Kaye S Morgan
- School of Physics and Astronomy, Monash University, Clayton, VIC, 3800, Australia
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Francken N, Sanctorum J, Renders J, Paramonov P, Sijbers J, De Beenhouwer J. A Condensed History Approach to X-Ray Dark Field Effects in Edge Illumination Phase Contrast Simulations. ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY. ANNUAL INTERNATIONAL CONFERENCE 2023; 2023:1-4. [PMID: 38083284 DOI: 10.1109/embc40787.2023.10340826] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2023]
Abstract
X-ray dark field signals, measurable in many x-ray phase contrast imaging (XPCI) setups, stem from unresolvable microstructures in the scanned sample. This makes them ideally suited for the detection of certain pathologies, which correlate with changes in the microstructure of a sample. Simulations of x-ray dark field signals can aid in the design and optimization of XPCI setups, and the development of new reconstruction techniques. Current simulation tools, however, require explicit modelling of the sample microstructures according to their size and spatial distribution. This process is cumbersome, does not translate well between different samples, and considerably slows down simulations. In this work, a condensed history approach to modelling x-ray dark field effects is presented, under the assumption of an isotropic distribution of microstructures, and applied to edge illumination phase contrast simulations. It substantially simplifies the sample model, can be easily ported between samples, and is two orders of magnitude faster than conventional dark field simulations, while showing equivalent results.Clinical relevance- Dark field signal provides information on the microstructure distribution within the investigated sample, which can be applied in areas such as histology and lung x-ray imaging. Efficient simulation tools for this dark field signal aid in optimizing scanning setups, acquisition schemes and reconstruction techniques.
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Zangi P, Ikematsu K, Meyer P, Takano H, Wu Y, Gutekunst J, Börner M, Last A, Korvink JG, Momose A. Parabolic gratings enhance the X-ray sensitivity of Talbot interferograms. Sci Rep 2023; 13:9624. [PMID: 37369747 DOI: 10.1038/s41598-023-36414-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 06/03/2023] [Indexed: 06/29/2023] Open
Abstract
In grating-based X-ray Talbot interferometry, the wave nature of X-ray radiation is exploited to generate phase contrast images of objects that do not generate sufficient contrast in conventional X-ray imaging relying on X-ray absorption. The phase sensitivity of this interferometric technique is proportional to the interferometer length and inversely proportional to the period of gratings. However, the limited spatial coherency of X-rays limits the maximum interferometer length, and the ability to obtain smaller-period gratings is limited by the manufacturing process. Here, we propose a new optical configuration that employs a combination of a converging parabolic micro-lens array and a diverging micro-lens array, instead of a binary phase grating. Without changing the grating period or the interferometer length, the phase signal is enhanced because the beam deflection by a sample is amplified through the array of converging-diverging micro-lens pairs. We demonstrate that the differential phase signal detected by our proposed set-up is twice that of a Talbot interferometer, using the same binary absorption grating, and with the same overall inter-grating distance.
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Affiliation(s)
- Pouria Zangi
- Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Katsumasa Ikematsu
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi, 980-8577, Japan
| | - Pascal Meyer
- Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Hidekazu Takano
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi, 980-8577, Japan
| | - Yanlin Wu
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi, 980-8577, Japan
| | - Josephine Gutekunst
- Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Martin Börner
- Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany.
- Karlsruhe Nano Micro Facility (KNMFi), Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany.
| | - Arndt Last
- Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
- Karlsruhe Nano Micro Facility (KNMFi), Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Jan G Korvink
- Institute of Microstructure Technology, Karlsruhe Institute of Technology, Hermann-von-Helmholtz-Platz 1, 76344, Eggenstein-Leopoldshafen, Germany
| | - Atsushi Momose
- Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi, 980-8577, Japan
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Pfeiffer F, Willer K, Viermetz M, Pfeiffer D. [Dark-field imaging and computed tomography : Novel X-ray-based contrast imaging modality with great promise for pulmonary imaging]. RADIOLOGIE (HEIDELBERG, GERMANY) 2023:10.1007/s00117-023-01161-4. [PMID: 37341743 DOI: 10.1007/s00117-023-01161-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Accepted: 05/03/2023] [Indexed: 06/22/2023]
Abstract
INTRODUCTION The spatial and contrast resolution of conventional planar or computed tomographic X‑ray techniques is not sufficient to investigate microstructures of tissues. Dark-field imaging with X‑rays is an emerging technology that recently provided the first clinical results and makes diagnostic use of interactions of the beams with tissue due to their wave character. APPLICATION Dark-field imaging can provide information about the microscopic structure or porosity of the tissue under investigation that is otherwise inaccessible. This makes it a valuable complement to conventional X‑ray imaging, which can only account for attenuation. Our results demonstrate that X‑ray dark-field imaging provides pictorial information about the underlying microstructure of the lung in humans. Given the close relationship between alveolar structure and the functional state of the lung, this is of great importance for diagnosis and therapy monitoring and may contribute to a better understanding of lung diseases in the future. In the early detection of chronic obstructive pulmonary disease, which is usually associated with structural impairment of the lung, this novel technique could help to facilitate its diagnosis. PERSPECTIVE The application of dark-field imaging to computed tomography is still under development because it is technically difficult. Meanwhile, a prototype for experimental application has been developed and is currently being tested on a variety of materials. Use in humans is conceivable especially for tissues whose microstructure favors characteristic interactions due to the wave nature of the X‑rays.
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Affiliation(s)
- Franz Pfeiffer
- Chair of Biomedical Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, 85748, Garching, Deutschland.
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Deutschland.
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum rechts der Isar, Technical University of Munich, 81675, München, Deutschland.
| | - Konstantin Willer
- Chair of Biomedical Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, 85748, Garching, Deutschland
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Deutschland
| | - Manuel Viermetz
- Chair of Biomedical Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, 85748, Garching, Deutschland
- Munich Institute of Biomedical Engineering, Technical University of Munich, 85748, Garching, Deutschland
| | - Daniela Pfeiffer
- Department of Diagnostic and Interventional Radiology, School of Medicine, Klinikum rechts der Isar, Technical University of Munich, 81675, München, Deutschland
- Institute for Advanced Study, Technical University of Munich, 85748, Garching, Deutschland
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Polikarpov M, Vila-Comamala J, Wang Z, Pereira A, van Gogh S, Gasser C, Jefimovs K, Romano L, Varga Z, Lång K, Schmeltz M, Tessarini S, Rawlik M, Jermann E, Lewis S, Yun W, Stampanoni M. Towards virtual histology with X-ray grating interferometry. Sci Rep 2023; 13:9049. [PMID: 37270642 DOI: 10.1038/s41598-023-35854-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Accepted: 05/24/2023] [Indexed: 06/05/2023] Open
Abstract
Breast cancer is the most common type of cancer worldwide. Diagnosing breast cancer relies on clinical examination, imaging and biopsy. A core-needle biopsy enables a morphological and biochemical characterization of the cancer and is considered the gold standard for breast cancer diagnosis. A histopathological examination uses high-resolution microscopes with outstanding contrast in the 2D plane, but the spatial resolution in the third, Z-direction, is reduced. In the present paper, we propose two high-resolution table-top systems for phase-contrast X-ray tomography of soft-tissue samples. The first system implements a classical Talbot-Lau interferometer and allows to perform ex-vivo imaging of human breast samples with a voxel size of 5.57 μm. The second system with a comparable voxel size relies on a Sigray MAAST X-ray source with structured anode. For the first time, we demonstrate the applicability of the latter to perform X-ray imaging of human breast specimens with ductal carcinoma in-situ. We assessed image quality of both setups and compared it to histology. We showed that both setups made it possible to target internal features of breast specimens with better resolution and contrast than previously achieved, demonstrating that grating-based phase-contrast X-ray CT could be a complementary tool for clinical histopathology.
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Affiliation(s)
- M Polikarpov
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland.
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland.
| | - J Vila-Comamala
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
| | - Z Wang
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
- Department of Engineering Physics, Tsinghua University, Haidian District, Beijing, 100080, China
| | - A Pereira
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
| | - S van Gogh
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
| | - C Gasser
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
| | - K Jefimovs
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
| | - L Romano
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
| | - Z Varga
- Department of Pathology and Molecular Pathology, University Hospital Zürich, 8091, Zurich, Switzerland
| | - K Lång
- Department of Diagnostic Radiology, Translational Medicine, Lund University, Lund, Sweden
- Unilabs Mammography Unit, Skåne University Hospital, Malmö, Sweden
| | - M Schmeltz
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
| | - S Tessarini
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
| | - M Rawlik
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
| | | | - S Lewis
- Sigray Inc., Concord, CA, 94520, USA
| | - W Yun
- Sigray Inc., Concord, CA, 94520, USA
| | - M Stampanoni
- Swiss Light Source, Paul Scherrer Institut, 5232, Villigen-PSI, Switzerland
- Institute for Biomedical Engineering, ETH Zurich, 8092, Zurich, Switzerland
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Vijayakumar J, Goudarzi NM, Eeckhaut G, Schrijnemakers K, Cnudde V, Boone MN. Characterization of Pharmaceutical Tablets by X-ray Tomography. Pharmaceuticals (Basel) 2023; 16:ph16050733. [PMID: 37242516 DOI: 10.3390/ph16050733] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2023] [Revised: 05/07/2023] [Accepted: 05/08/2023] [Indexed: 05/28/2023] Open
Abstract
Solid dosage forms such as tablets are extensively used in drug administration for their simplicity and large-scale manufacturing capabilities. High-resolution X-ray tomography is one of the most valuable non-destructive techniques to investigate the internal structure of the tablets for drug product development as well as for a cost effective production process. In this work, we review the recent developments in high-resolution X-ray microtomography and its application towards different tablet characterizations. The increased availability of powerful laboratory instrumentation, as well as the advent of high brilliance and coherent 3rd generation synchrotron light sources, combined with advanced data processing techniques, are driving the application of X-ray microtomography forward as an indispensable tool in the pharmaceutical industry.
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Affiliation(s)
- Jaianth Vijayakumar
- Centre for X-ray Tomography (UGCT), Ghent University, Proeftuinstraat 86/N3, 9000 Gent, Belgium
- Department of Physics and Astronomy, Radiation Physics, Ghent University, Proeftuinstraat 86/N12, 9000 Gent, Belgium
| | - Niloofar Moazami Goudarzi
- Centre for X-ray Tomography (UGCT), Ghent University, Proeftuinstraat 86/N3, 9000 Gent, Belgium
- Department of Physics and Astronomy, Radiation Physics, Ghent University, Proeftuinstraat 86/N12, 9000 Gent, Belgium
| | - Guy Eeckhaut
- Janssen Pharmaceutica, Turnhoutseweg 30, 2340 Beerse, Belgium
| | | | - Veerle Cnudde
- Centre for X-ray Tomography (UGCT), Ghent University, Proeftuinstraat 86/N3, 9000 Gent, Belgium
- Pore-Scale Processes in Geomaterials Research (PProGRess), Department of Geology, Ghent University, Krijgslaan 281/S8, 9000 Gent, Belgium
- Environmental Hydrogeology, Department of Earth Sciences, Faculty of Geosciences, Utrecht University, Princetonlaan 8A, 3584 CD Utrecht, The Netherlands
| | - Matthieu N Boone
- Centre for X-ray Tomography (UGCT), Ghent University, Proeftuinstraat 86/N3, 9000 Gent, Belgium
- Department of Physics and Astronomy, Radiation Physics, Ghent University, Proeftuinstraat 86/N12, 9000 Gent, Belgium
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Yang X, Shi L, Li A, Gao F, Sun W, Li Z. Phase-contrast imaging with synchrotron hard X-ray reveals the effect of icariin on bone tissue morphology and microstructure in rabbits with early glucocorticoid-induced osteonecrosis of the femoral head. Front Cell Dev Biol 2023; 11:1155532. [PMID: 37215078 PMCID: PMC10192577 DOI: 10.3389/fcell.2023.1155532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 04/20/2023] [Indexed: 05/24/2023] Open
Abstract
Background: Phase-contrast imaging (PCI) with synchrotron hard X-ray was used to observe the changes in bone tissue morphology and microstructure in rabbit models of early glucocorticoid-induced osteonecrosis of the femoral head (ONFH), and to evaluate the intervention effect of Icariin. Methods: Fifty mature New Zealand rabbits (weighing 2.5-3.0 kg) were randomly divided into a control group (n = 10), a glucocorticoid group (n = 20), and an Icariin group (n = 20). The glucocorticoid group and the Icariin group were sequentially injected with lipopolysaccharide (LPS) and methylprednisolone (MPS) to establish a glucocorticoid-induced ONFH animal model. The Icariin group was given Icariin solution when methylprednisolone was injected for the first time, and the control group and glucocorticoid group were given the same amount of normal saline. Animals were sacrificed after 6 weeks, and bilateral femoral head specimens were taken for research. The right femoral head was observed by PCI with synchrotron hard X-ray technology, and the left femoral head was verified by Micro-CT scanning and HE staining. Results: Forty-three animals (nine in the control group, sixteen in the glucocorticoid group, and eighteen in the Icariin group) were included in the study. PCI with synchrotron hard X-ray revealed that the trabecular bone in the glucocorticoid group was thinned, broken, and structurally damaged, whereas the trabecular bone in the Icariin group had normal volume, thickness, and a relatively intact structure. Micro-CT scan reconstruction and HE staining were used to verify the reliability of this technique in identifying osteonecrosis. Conclusion: The effects of Icariin were observed in an early glucocorticoid-induced ONFH rabbit model using PCI with synchrotron hard X-ray. Icariin weakens the destructive effect of glucocorticoids on bone tissue structure, improves bone tissue morphology, and stabilizes bone microstructure. This technique may provide a definitive, non-invasive alternative to histological examination for the diagnosis of early ONFH.
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Affiliation(s)
- Xu Yang
- Department of Orthopedics, Peking University China-Japan Friendship Clinical Hospital, Beijing, China
- Health Science Centre, Peking University, Beijing, China
| | - Lijun Shi
- Department of Orthopedic Surgery, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, Henan, China
| | - Aifeng Li
- Department of Nephrology, Xiyuan Hospital, China Academy of Chinese Medical Sciences, Beijing, China
| | - Fuqiang Gao
- Centre for Osteonecrosis and Joint-Preserving & Reconstruction, Orthopaedic Department, China-Japan Friendship Hospital, Beijing, China
| | - Wei Sun
- Centre for Osteonecrosis and Joint-Preserving & Reconstruction, Orthopaedic Department, China-Japan Friendship Hospital, Beijing, China
- Department of Orthopaedic Surgery, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, United States
| | - Zirong Li
- Centre for Osteonecrosis and Joint-Preserving & Reconstruction, Orthopaedic Department, China-Japan Friendship Hospital, Beijing, China
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Ren K, Gu Y, Luo M, Chen H, Wang Z. Deep-learning-based denoising of X-ray differential phase and dark-field images. Eur J Radiol 2023; 163:110835. [PMID: 37098281 DOI: 10.1016/j.ejrad.2023.110835] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2022] [Revised: 03/27/2023] [Accepted: 04/07/2023] [Indexed: 04/27/2023]
Abstract
PURPOSE Statistical photon noise has always been a common problem in X-ray multi-contrast imaging and significantly influenced the quality of retrieved differential phase and dark-field images. We intend to develop a deep learning-based denoising algorithm to reduce the noise of retrieved X-ray differential phase and dark-field images. METHODS A novel deep learning based image noise suppression algorithm (named DnCNN-P) is presented. We proposed two different denoising modes: Retrieval-Denoising mode (R-D mode) and Denoising-Retrieval mode (D-R mode). While the R-D mode denoises the retrieved images, the D-R mode denoises the raw phase stepping data. The two denoising modes are evaluated under different photon counts and visibilities. RESULTS Experimental results show that with the algorithm DnCNN-P used, the D-R mode always exhibits a better noise reduction under diverse experimental conditions, even in the case of a low photon count and/or a low visibility. With a detected photon count of 1800 and a visibility of 0.3, compared to the differential phase images without denoising, the standard deviation is reduced by 89.1% and 16.4% in the D-R and R-D modes. Compared to the dark-field images without denoising, the standard deviation is reduced by 83.7% and 12.6% in the D-R and R-D modes, respectively. CONCLUSIONS The novel supervised DnCNN-P algorithm can significantly reduce the noise in retrieved X-ray differential phase and dark-field images. We believe this novel algorithm can be a promising approach to improve the quality of X-ray differential phase and dark-field images, and therefore dose efficiency in future biomedical applications.
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Affiliation(s)
- Kun Ren
- School of Microelectronics, Hefei University of Technology, Hefei 230009, China
| | - Yao Gu
- School of Physics, Hefei University of Technology, Hefei 230009, China
| | - Mengsi Luo
- School of Physics, Hefei University of Technology, Hefei 230009, China
| | - Heng Chen
- School of Physics, Hefei University of Technology, Hefei 230009, China
| | - Zhili Wang
- School of Physics, Hefei University of Technology, Hefei 230009, China.
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36
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Alloo SJ, Morgan KS, Paganin DM, Pavlov KM. Multimodal intrinsic speckle-tracking (MIST) to extract images of rapidly-varying diffuse X-ray dark-field. Sci Rep 2023; 13:5424. [PMID: 37012270 PMCID: PMC10070351 DOI: 10.1038/s41598-023-31574-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 03/14/2023] [Indexed: 04/05/2023] Open
Abstract
Speckle-based phase-contrast X-ray imaging (SB-PCXI) can reconstruct high-resolution images of weakly-attenuating materials that would otherwise be indistinguishable in conventional attenuation-based X-ray imaging. The experimental setup of SB-PCXI requires only a sufficiently coherent X-ray source and spatially random mask, positioned between the source and detector. The technique can extract sample information at length scales smaller than the imaging system's spatial resolution; this enables multimodal signal reconstruction. "Multimodal Intrinsic Speckle-Tracking" (MIST) is a rapid and deterministic formalism derived from the paraxial-optics form of the Fokker-Planck equation. MIST simultaneously extracts attenuation, refraction, and small-angle scattering (diffusive dark-field) signals from a sample and is more computationally efficient compared to alternative speckle-tracking approaches. Hitherto, variants of MIST have assumed the diffusive dark-field signal to be spatially slowly varying. Although successful, these approaches have been unable to well-describe unresolved sample microstructure whose statistical form is not spatially slowly varying. Here, we extend the MIST formalism such that this restriction is removed, in terms of a sample's rotationally-isotropic diffusive dark-field signal. We reconstruct multimodal signals of two samples, each with distinct X-ray attenuation and scattering properties. The reconstructed diffusive dark-field signals have superior image quality-as measured by the naturalness image quality evaluator, signal-to-noise ratio, and azimuthally averaged power-spectrum-compared to our previous approaches which assume the diffusive dark-field to be a slowly varying function of transverse position. Our generalisation may assist increased adoption of SB-PCXI in applications such as engineering and biomedical disciplines, forestry, and palaeontology, and is anticipated to aid the development of speckle-based diffusive dark-field tensor tomography.
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Affiliation(s)
- Samantha J Alloo
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch, New Zealand.
| | - Kaye S Morgan
- School of Physics and Astronomy, Monash University, Clayton, VIC, Australia
| | - David M Paganin
- School of Physics and Astronomy, Monash University, Clayton, VIC, Australia
| | - Konstantin M Pavlov
- School of Physical and Chemical Sciences, University of Canterbury, Christchurch, New Zealand
- School of Physics and Astronomy, Monash University, Clayton, VIC, Australia
- School of Science and Technology, University of New England, Armidale, NSW, Australia
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Viermetz M, Gustschin N, Schmid C, Haeusele J, Gleich B, Renger B, Koehler T, Pfeiffer F. Initial Characterization of Dark-Field CT on a Clinical Gantry. IEEE TRANSACTIONS ON MEDICAL IMAGING 2023; 42:1035-1045. [PMID: 36395124 DOI: 10.1109/tmi.2022.3222839] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
X-ray computed tomography (CT) is an important non-destructive imaging technique, particularly in clinical diagnostics. Even with the latest innovations like dual-energy and photon-counting CT, the image contrast is solely generated from attenuation in the tissue. An extension - fully compatible with these novelties - is dark-field CT, which retrieves an additional, so-called dark-field contrast. Unlike the attenuation channel, the dark-field channel is sensitive to tissue microstructure and porosity below the resolution of the imaging system, which allows additional insights into the health of the lung tissue or the structure of calcifications. The potential clinical value has been demonstrated in several preclinical studies and recently also in radiography patient studies. Just recently the first dark-field CT for the human body was established at the Technical University of Munich and in this paper, we discuss the performance of this prototype. We evaluate the interferometer components and the imposed challenges that the integration into the CT gantry brings by comparing the results to simulations and measurements at a laboratory setup. The influence of the clinical X-ray source on the Talbot-Lau interferometer and the impact of vibrations, which are immanent on the clinical CT gantry, are analyzed in detail to reveal their characteristic frequencies and origin. A beam hardening correction is introduced as an important step to adapt to the poly-chromatic spectrum and make quantitative dark-field imaging possible. We close with an analysis of the image resolution and the applied patient dose, and conclude that the performance is sufficient to suggest initial patient studies using the presented dark-field CT system.
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Croughan MK, How YY, Pennings A, Morgan KS. Directional dark-field retrieval with single-grid x-ray imaging. OPTICS EXPRESS 2023; 31:11578-11597. [PMID: 37155790 DOI: 10.1364/oe.480031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Directional dark-field imaging is an emerging x-ray modality that is sensitive to unresolved anisotropic scattering from sub-pixel sample microstructures. A single-grid imaging setup can be used to capture dark-field images by looking at changes in a grid pattern projected upon the sample. By creating analytical models for the experiment, we have developed a single-grid directional dark-field retrieval algorithm that can extract dark-field parameters such as the dominant scattering direction, and the semi-major and -minor scattering angles. We show that this method is effective even in the presence of high image noise, allowing for low-dose and time-sequence imaging.
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Dou LY, Cao DZ, Gao L, Song XB. Sub-Rayleigh dark-field imaging via speckle illumination. OPTICS LETTERS 2023; 48:1347-1350. [PMID: 36946924 DOI: 10.1364/ol.483612] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Accepted: 02/03/2023] [Indexed: 06/18/2023]
Abstract
We demonstrate sub-Rayleigh dark-field imaging via speckle illumination. Imaging is achieved with second-order autocorrelated measurement by illuminating objects with hollow conical pseudothermal light. Our scheme can work well for highly transparent amplitude objects, pure phase objects, and even more complex transparent objects. The autocorrelated dark-field images show better resolution than intensity-averaged images and an ability in filtering out low-frequency noises.
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40
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Brombal L, Arfelli F, Menk RH, Rigon L, Brun F. PEPI Lab: a flexible compact multi-modal setup for X-ray phase-contrast and spectral imaging. Sci Rep 2023; 13:4206. [PMID: 36918574 PMCID: PMC10014955 DOI: 10.1038/s41598-023-30316-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2022] [Accepted: 02/21/2023] [Indexed: 03/15/2023] Open
Abstract
This paper presents a new flexible compact multi-modal imaging setup referred to as PEPI (Photon-counting Edge-illumination Phase-contrast imaging) Lab, which is based on the edge-illumination (EI) technique and a chromatic detector. The system enables both X-ray phase-contrast (XPCI) and spectral (XSI) imaging of samples on the centimeter scale. This work conceptually follows all the stages in its realization, from the design to the first imaging results. The setup can be operated in four different modes, i.e. photon-counting/conventional, spectral, double-mask EI, and single-mask EI, whereby the switch to any modality is fast, software controlled, and does not require any hardware modification or lengthy re-alignment procedures. The system specifications, ranging from the X-ray tube features to the mask material and aspect ratio, have been quantitatively studied and optimized through a dedicated Geant4 simulation platform, guiding the choice of the instrumentation. The realization of the imaging setup, both in terms of hardware and control software, is detailed and discussed with a focus on practical/experimental aspects. Flexibility and compactness (66 cm source-to-detector distance in EI) are ensured by dedicated motion stages, whereas spectral capabilities are enabled by the Pixirad-1/Pixie-III detector in combination with a tungsten anode X-ray source operating in the range 40-100 kVp. The stability of the system, when operated in EI, has been verified, and drifts leading to mask misalignment of less than 1 [Formula: see text]m have been measured over a period of 54 h. The first imaging results, one for each modality, demonstrate that the system fulfills its design requirements. Specifically, XSI tomographic images of an iodine-based phantom demonstrate the system's quantitativeness and sensibility to concentrations in the order of a few mg/ml. Planar XPCI images of a carpenter bee specimen, both in single and double-mask modes, demonstrate that refraction sensitivity (below 0.6 [Formula: see text]rad in double-mask mode) is comparable with other XPCI systems based on microfocus sources. Phase CT capabilities have also been tested on a dedicated plastic phantom, where the phase channel yielded a 15-fold higher signal-to-noise ratio with respect to attenuation.
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Affiliation(s)
- Luca Brombal
- Department of Physics, University of Trieste, 34127, Trieste, Italy.,Division of Trieste, National Institute for Nuclear Physics (INFN), 34127, Trieste, Italy
| | - Fulvia Arfelli
- Department of Physics, University of Trieste, 34127, Trieste, Italy.,Division of Trieste, National Institute for Nuclear Physics (INFN), 34127, Trieste, Italy
| | - Ralf Hendrik Menk
- Division of Trieste, National Institute for Nuclear Physics (INFN), 34127, Trieste, Italy. .,Elettra Sincrotrone Trieste S.C.p.A., 34149, Basovizza, TS, Italy.
| | - Luigi Rigon
- Department of Physics, University of Trieste, 34127, Trieste, Italy.,Division of Trieste, National Institute for Nuclear Physics (INFN), 34127, Trieste, Italy
| | - Francesco Brun
- Division of Trieste, National Institute for Nuclear Physics (INFN), 34127, Trieste, Italy.,Department of Engineering and Architecture, University of Trieste, 34127, Trieste, Italy
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41
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Schmid C, Viermetz M, Gustschin N, Noichl W, Haeusele J, Lasser T, Koehler T, Pfeiffer F. Modeling Vibrations of a Tiled Talbot-Lau Interferometer on a Clinical CT. IEEE TRANSACTIONS ON MEDICAL IMAGING 2023; 42:774-784. [PMID: 36301786 DOI: 10.1109/tmi.2022.3217662] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
X-ray computed tomography (CT) is an invaluable imaging technique for non-invasive medical diagnosis. However, for soft tissue in the human body the difference in attenuation is inherently small. Grating-based X-ray phase-contrast is a relatively novel imaging method which detects additional interaction mechanisms between photons and matter, namely refraction and small-angle scattering, to generate additional images with different contrast. The experimental setup involves a Talbot-Lau interferometer whose susceptibility to mechanical vibrations hindered acquisition schemes suitable for clinical routine in the past. We present a processing pipeline to identify spatially and temporally variable fluctuations occurring in an interferometer installed on a continuously rotating clinical CT gantry. The correlations of the vibrations in the modular grating setup are exploited to identify a small number of relevant fluctuation modes, allowing for a sample reconstruction free of vibration artifacts.
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42
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Spindler S, Etter D, Rawlik M, Polikarpov M, Romano L, Shi Z, Jefimovs K, Wang Z, Stampanoni M. The choice of an autocorrelation length in dark-field lung imaging. Sci Rep 2023; 13:2731. [PMID: 36792717 PMCID: PMC9932147 DOI: 10.1038/s41598-023-29762-y] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2022] [Accepted: 02/09/2023] [Indexed: 02/17/2023] Open
Abstract
Respiratory diseases are one of the most common causes of death, and their early detection is crucial for prompt treatment. X-ray dark-field radiography (XDFR) is a promising tool to image objects with unresolved micro-structures such as lungs. Using Talbot-Lau XDFR, we imaged inflated porcine lungs together with Polymethylmethacrylat (PMMA) microspheres (in air) of diameter sizes between 20 and 500 [Formula: see text] over an autocorrelation range of 0.8-5.2 [Formula: see text]. The results indicate that the dark-field extinction coefficient of porcine lungs is similar to that of densely-packed PMMA spheres with diameter of [Formula: see text], which is approximately the mean alveolar structure size. We evaluated that, in our case, the autocorrelation length would have to be limited to [Formula: see text] in order to image [Formula: see text]-thick lung tissue without critical visibility reduction (signal saturation). We identify the autocorrelation length to be the critical parameter of an interferometer that allows to avoid signal saturation in clinical lung dark-field imaging.
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Affiliation(s)
- Simon Spindler
- Swiss Light Source, Paul Scherrer Institute, 5232, Villigen, Switzerland. .,Institute for Biomedical Engineering, ETH Zürich, 8092, Zürich, Switzerland.
| | - Dominik Etter
- grid.5991.40000 0001 1090 7501Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland ,grid.482286.2Institute for Biomedical Engineering, ETH Zürich, 8092 Zürich, Switzerland
| | - Michał Rawlik
- grid.5991.40000 0001 1090 7501Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland ,grid.482286.2Institute for Biomedical Engineering, ETH Zürich, 8092 Zürich, Switzerland
| | - Maxim Polikarpov
- grid.5991.40000 0001 1090 7501Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland ,grid.482286.2Institute for Biomedical Engineering, ETH Zürich, 8092 Zürich, Switzerland
| | - Lucia Romano
- grid.5991.40000 0001 1090 7501Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland ,grid.482286.2Institute for Biomedical Engineering, ETH Zürich, 8092 Zürich, Switzerland
| | - Zhitian Shi
- grid.5991.40000 0001 1090 7501Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland ,grid.482286.2Institute for Biomedical Engineering, ETH Zürich, 8092 Zürich, Switzerland
| | - Konstantins Jefimovs
- grid.5991.40000 0001 1090 7501Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland
| | - Zhentian Wang
- grid.482286.2Institute for Biomedical Engineering, ETH Zürich, 8092 Zürich, Switzerland ,grid.12527.330000 0001 0662 3178Department of Engineering Physics, Tsinghua University, Haidian District, 100080 Beijing, China ,grid.419897.a0000 0004 0369 313XKey Laboratory of Particle & Radiation Imaging, (Tsinghua University) Ministry of Education, Haidian District, 100080 Beijing, China
| | - Marco Stampanoni
- grid.5991.40000 0001 1090 7501Swiss Light Source, Paul Scherrer Institute, 5232 Villigen, Switzerland ,grid.482286.2Institute for Biomedical Engineering, ETH Zürich, 8092 Zürich, Switzerland
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43
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Tang R, Organista C, Goethals W, Stolp W, Stampanoni M, Aelterman J, Boone MN. Detailed analysis of the interference patterns measured in lab-based X-ray dual-phase grating interferometry through wave propagation simulation. OPTICS EXPRESS 2023; 31:1677-1691. [PMID: 36785198 DOI: 10.1364/oe.477964] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/13/2022] [Accepted: 11/17/2022] [Indexed: 06/18/2023]
Abstract
In this work, we analyze the interference patterns measured in lab-based dual-phase grating interferometry and for the first time explain the spatial dependencies of the measured interference patterns and the large visibility deviations between the theoretical prediction and the experimental results. To achieve this, a simulator based on wave propagation is developed. This work proves that the experimental results can be simulated with high accuracy by including the effective grating thickness profile induced by the cone-beam geometry, the measured detector response function and a non-ideal grating shape. With the comprehensive understanding of dual-phase grating interferometry, this provides the foundations for a more efficient and accurate algorithm to retrieve sample's structure information, and the realistic simulator is a useful tool for optimizing the set-up.
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44
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Taphorn K, Kaster L, Sellerer T, Hötger A, Herzen J. Spectral X-ray dark-field signal characterization from dual-energy projection phase-stepping data with a Talbot-Lau interferometer. Sci Rep 2023; 13:767. [PMID: 36641492 PMCID: PMC9840630 DOI: 10.1038/s41598-022-27155-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Accepted: 12/27/2022] [Indexed: 01/16/2023] Open
Abstract
Material-selective analysis of spectral X-ray imaging data requires prior knowledge of the energy dependence of the observed signal. Contrary to conventional X-ray imaging, where the material-specific attenuation coefficient is usually precisely known, the linear diffusion coefficient of the X-ray dark-field contrast does not only depend on the material and its microstructure, but also on the setup geometry and is difficult to access. Here, we present an optimization approach to retrieve the energy dependence of the X-ray dark-field signal quantitatively on the example of closed-cell foams from projection data without the need for additional hardware to a standard grating-based X-ray dark-field imaging setup. A model for the visibility is used to determine the linear diffusion coefficient with a least-squares optimization. The comparison of the results to spectrometer measurements of the linear diffusion coefficient suggests the proposed method to provide a good estimate for the energydependent dark-field signal.
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Affiliation(s)
- Kirsten Taphorn
- grid.6936.a0000000123222966Research Group Biomedical imaging Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, 85748 Garching, Germany ,grid.6936.a0000000123222966Munich Institute of Biomedical Engineering (MIBE), Technical University of Munich, 85748 Garching, Germany
| | - Lennard Kaster
- grid.6936.a0000000123222966Research Group Biomedical imaging Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, 85748 Garching, Germany ,grid.6936.a0000000123222966Munich Institute of Biomedical Engineering (MIBE), Technical University of Munich, 85748 Garching, Germany
| | - Thorsten Sellerer
- grid.6936.a0000000123222966Research Group Biomedical imaging Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, 85748 Garching, Germany ,grid.6936.a0000000123222966Munich Institute of Biomedical Engineering (MIBE), Technical University of Munich, 85748 Garching, Germany
| | - Alexander Hötger
- grid.6936.a0000000123222966Walter Schottky Institute and Physics Department, School of Natural Sciences, Technical University of Munich, 85748 Garching, Germany ,grid.510972.80000 0005 0774 4499Munich Center for Quantum Science and Technology (MCQST), 80799 Munich, Germany
| | - Julia Herzen
- grid.6936.a0000000123222966Research Group Biomedical imaging Physics, Department of Physics, School of Natural Sciences, Technical University of Munich, 85748 Garching, Germany ,grid.6936.a0000000123222966Munich Institute of Biomedical Engineering (MIBE), Technical University of Munich, 85748 Garching, Germany
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45
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De Marco F, Savatović S, Smith R, Di Trapani V, Margini M, Lautizi G, Thibault P. High-speed processing of X-ray wavefront marking data with the Unified Modulated Pattern Analysis (UMPA) model. OPTICS EXPRESS 2023; 31:635-650. [PMID: 36606998 DOI: 10.1364/oe.474794] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Accepted: 12/04/2022] [Indexed: 06/17/2023]
Abstract
Wavefront-marking X-ray imaging techniques use e.g., sandpaper or a grating to generate intensity fluctuations, and analyze their distortion by the sample in order to retrieve attenuation, phase-contrast, and dark-field information. Phase contrast yields an improved visibility of soft-tissue specimens, while dark-field reveals small-angle scatter from sub-resolution structures. Both have found many biomedical and engineering applications. The previously developed Unified Modulated Pattern Analysis (UMPA) model extracts these modalities from wavefront-marking data. We here present a new UMPA implementation, capable of rapidly processing large datasets and featuring capabilities to greatly extend the field of view. We also discuss possible artifacts and additional new features.
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46
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Dierks H, Stjärneblad P, Wallentin J. A versatile laboratory setup for high resolution X-ray phase contrast tomography and scintillator characterization. JOURNAL OF X-RAY SCIENCE AND TECHNOLOGY 2023; 31:1-12. [PMID: 36404526 PMCID: PMC9912733 DOI: 10.3233/xst-221294] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 10/11/2022] [Accepted: 10/30/2022] [Indexed: 06/16/2023]
Abstract
BACKGROUND X-ray micro-tomography (μCT) is a powerful non-destructive 3D imaging method applied in many scientific fields. In combination with propagation-based phase-contrast, the method is suitable for samples with low absorption contrast. Phase contrast tomography has become available in the lab with the ongoing development of micro-focused tube sources, but it requires sensitive and high-resolution X-ray detectors. The development of novel scintillation detectors, particularly for microscopy, requires more flexibility than available in commercial tomography systems. OBJECTIVE We aim to develop a compact, flexible, and versatile μCT laboratory setup that combines absorption and phase contrast imaging as well as the option to use it for scintillator characterization. Here, we present details on the design and implementation of the setup. METHODS We used the setup for μCT in absorption and propagation-based phase-contrast mode, as well as to study a perovskite scintillator. RESULTS We show the 2D and 3D performance in absorption and phase contrast mode, as well as how the setup can be used for testing new scintillator materials in a realistic imaging environment. A spatial resolution of around 1.3μm is measured in 2D and 3D. CONCLUSIONS The setup meets the needs for common absorption μCT applications and offers increased contrast in phase contrast mode. The availability of a versatile laboratory μCT setup allows not only for easy access to tomographic measurements, but also enables a prompt monitoring and feedback beneficial for advances in scintillator fabrication.
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Affiliation(s)
- Hanna Dierks
- Lund University, Synchrotron Radiation Research and NanoLund, Lund, Sweden
| | - Philip Stjärneblad
- Lund University, Synchrotron Radiation Research and NanoLund, Lund, Sweden
| | - Jesper Wallentin
- Lund University, Synchrotron Radiation Research and NanoLund, Lund, Sweden
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47
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Viermetz M, Gustschin N, Schmid C, Haeusele J, Noel PB, Proksa R, Loscher S, Koehler T, Pfeiffer F. Technical Design Considerations of a Human-Scale Talbot-Lau Interferometer for Dark-Field CT. IEEE TRANSACTIONS ON MEDICAL IMAGING 2023; 42:220-232. [PMID: 36112565 DOI: 10.1109/tmi.2022.3207579] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
Computed tomography (CT) as an important clinical diagnostics method can profit from extension with dark-field imaging, as it is currently restricted to X-rays' attenuation contrast only. Dark-field imaging allows access to more tissue properties, such as micro-structural texture or porosity. The up-scaling process to clinical scale is complex because several design constraints must be considered. The two most important ones are that the finest grating is limited by current manufacturing technology to a [Formula: see text] period and that the interferometer should fit into the CT gantry with minimal modifications only. In this work we discuss why an inverse interferometer and a triangular G1 profile are advantageous and make a compact and sensitive interferometer implementation feasible. Our evaluation of the triangular grating profile reveals a deviation in the interference pattern compared to standard grating profiles, which must be considered in the subsequent data processing. An analysis of the grating orientation demonstrates that currently only a vertical layout can be combined with cylindrical bending of the gratings. We also provide an in-depth discussion, including a new simulation approach, of the impact of the extended X-ray source spot which can lead to large performance loss and present supporting experimental results. This analysis reveals a vastly increased sensitivity to geometry and grating period deviations, which must be considered early in the system design process.
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48
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Tian Z, Tao S, Bai L, Xu Y, Liu X, Kuang C. A novel fusion method for X-ray phase contrast imaging based on fast adaptive bidimensional empirical mode decomposition. JOURNAL OF X-RAY SCIENCE AND TECHNOLOGY 2023; 31:1341-1362. [PMID: 37840465 DOI: 10.3233/xst-230180] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/17/2023]
Abstract
BACKGROUNDS X-ray phase contrast imaging (XPCI) can separate the attenuation, refraction, and scattering signals of the object. The application of image fusion enables the concentration of distinctive information into a single image. Some methods have been applied in XPCI field, but wavelet-based decomposition approaches often result in loss of original data. OBJECTIVE To explore the application value of a novel image fusion method for XPCI system and computed tomography (CT) system. METHODS The means of fast adaptive bidimensional empirical mode decomposition (FABEMD) is considered for image decomposition to avoid unnecessary information loss. A parameter δ is proposed to guide the fusion of bidimensional intrinsic mode functions which contain high-frequency information, using a pulse coupled neural network with morphological gradients (MGPCNN). The residual images are fused by the energy attribute fusion strategy. Image preprocessing and enhancement are performed on the result to ensure its quality. The effectiveness of other image fusion methods has been compared, such as discrete wavelet transforms and anisotropic diffusion fusion. RESULTS The δ-guided FABEMD-MGPCNN method achieved either the first or second position in objective evaluation metrics with biological samples, as compared to other image fusion methods. Moreover, comparisons are made with other fusion methods used for XPCI. Finally, the proposed method applied in CT show expected results to retain the feature information. CONCLUSIONS The proposed δ-guided FABEMD-MGPCNN method shows potential feasibility and superiority over traditional and recent image fusion methods for X-ray differential phase contrast imaging and computed tomography systems.
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Affiliation(s)
- Zonghan Tian
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science & Engineering, Zhejiang University, Hangzhou, China
| | - Siwei Tao
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science & Engineering, Zhejiang University, Hangzhou, China
| | - Ling Bai
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science & Engineering, Zhejiang University, Hangzhou, China
| | - Yueshu Xu
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science & Engineering, Zhejiang University, Hangzhou, China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China
| | - Xu Liu
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science & Engineering, Zhejiang University, Hangzhou, China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China
- Ningbo Research Institute, Zhejiang University, Ningbo, China
- Collaborative Innovation Center of Extreme Optics, Shanxi University, Taiyuan, China
| | - Cuifang Kuang
- State Key Laboratory of Extreme Photonics and Instrumentation, College of Optical Science & Engineering, Zhejiang University, Hangzhou, China
- ZJU-Hangzhou Global Scientific and Technological Innovation Center, Hangzhou, China
- Ningbo Research Institute, Zhejiang University, Ningbo, China
- Collaborative Innovation Center of Extreme Optics, Shanxi University, Taiyuan, China
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Yang JS, Jeon SY, Choi JH. Acquisition of a single grid-based phase-contrast X-ray image using instantaneous frequency and noise filtering. Biomed Eng Online 2022; 21:92. [PMID: 36575491 PMCID: PMC9793636 DOI: 10.1186/s12938-022-01061-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 12/20/2022] [Indexed: 12/28/2022] Open
Abstract
BACKGROUND To obtain phase-contrast X-ray images, single-grid imaging systems are effective, but Moire artifacts remain a significant issue. The solution for removing Moire artifacts from an image is grid rotation, which can distinguish between these artifacts and sample information within the Fourier space. However, the mechanical movement of grid rotation is slower than the real-time change in Moire artifacts. Thus, Moire artifacts generated during real-time imaging cannot be removed using grid rotation. To overcome this problem, we propose an effective method to obtain phase-contrast X-ray images using instantaneous frequency and noise filtering. RESULT The proposed phase-contrast X-ray image using instantaneous frequency and noise filtering effectively suppressed noise with Moire patterns. The proposed method also preserved the clear edge of the inner and outer boundaries and internal anatomical information from the biological sample, outperforming conventional Fourier analysis-based methods, including absorption, scattering, and phase-contrast X-ray images. In particular, when comparing the phase information for the proposed method with the x-axis gradient image from the absorption image, the proposed method correctly distinguished two different types of soft tissue and the detailed information, while the latter method did not. CONCLUSION This study successfully achieved a significant improvement in image quality for phase-contrast X-ray images using instantaneous frequency and noise filtering. This study can provide a foundation for real-time bio-imaging research using three-dimensional computed tomography.
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Affiliation(s)
- Jae-Suk Yang
- grid.255649.90000 0001 2171 7754Division of Mechanical and Biomedical Engineering, Graduate Program in System Health Science and Engineering, Ewha Womans University, Seoul, 03760 Republic of Korea
| | - Sun-Young Jeon
- grid.255649.90000 0001 2171 7754Division of Mechanical and Biomedical Engineering, Graduate Program in System Health Science and Engineering, Ewha Womans University, Seoul, 03760 Republic of Korea
| | - Jang-Hwan Choi
- grid.255649.90000 0001 2171 7754Division of Mechanical and Biomedical Engineering, Graduate Program in System Health Science and Engineering, Ewha Womans University, Seoul, 03760 Republic of Korea
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50
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Gassert FT, Frank M, De Marco F, Willer K, Urban T, Herzen J, Fingerle AA, Sauter AP, Makowski MR, Kriner F, Fischer F, Braun C, Pfeiffer F, Pfeiffer D. Assessment of Inflation in a Human Cadaveric Lung with Dark-Field Chest Radiography. Radiol Cardiothorac Imaging 2022; 4:e220093. [PMID: 36601456 PMCID: PMC9806722 DOI: 10.1148/ryct.220093] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Revised: 09/14/2022] [Accepted: 11/08/2022] [Indexed: 12/16/2022]
Abstract
Dark-field chest radiography signal intensity appeared to correlate with inflation status in a cadaveric lung.
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