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Telman W, Dietz KJ. Thiol redox-regulation for efficient adjustment of sulfur metabolism in acclimation to abiotic stress. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4223-4236. [PMID: 30868161 DOI: 10.1093/jxb/erz118] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2018] [Accepted: 03/07/2019] [Indexed: 06/09/2023]
Abstract
Sulfur assimilation and sulfur metabolism are tightly controlled at the transcriptional, post-transcriptional, and post-translational levels in order to meet the demand for reduced sulfur in growth and metabolism. These regulatory mechanisms coordinate the cellular sulfhydryl supply with carbon and nitrogen assimilation in particular. Redox homeostasis is an important cellular parameter intimately connected to sulfur by means of multiple thiol modifications. Post-translational thiol modifications such as disulfide formation, sulfenylation, S-nitrosylation, persulfidation, and S-glutathionylation allow for versatile switching and adjustment of protein functions. This review focuses on redox-regulation of enzymes involved in the sulfur assimilation pathway, namely adenosine 5´-phosphosulfate reductase (APR), adenosine 5´-phosphosulfate kinase (APSK), and γ-glutamylcysteine ligase (GCL). The activity of these enzymes is adjusted at the transcriptional and post-translational level depending on physiological requirements and the state of the redox and reactive oxygen species network, which are tightly linked to abiotic stress conditions. Hormone-dependent fine-tuning contributes to regulation of sulfur assimilation. Thus, the link between oxylipin signalling and sulfur assimilation has been substantiated by identification of the so-called COPS module in the chloroplast with its components cyclophilin 20-3, O-acetylserine thiol lyase, 2-cysteine peroxiredoxin, and serine acetyl transferase. We now have a detailed understanding of how regulation enables the fine-tuning of sulfur assimilation under both normal and abiotic stress conditions.
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Affiliation(s)
- Wilena Telman
- Department of Biochemistry and Physiology of Plants, Faculty of Biology, Bielefeld University, Universitätsstr. 25, Bielefeld, Germany
| | - Karl-Josef Dietz
- Department of Biochemistry and Physiology of Plants, Faculty of Biology, Bielefeld University, Universitätsstr. 25, Bielefeld, Germany
- Center for Biotechnology-CeBiTec, Bielefeld University, Universitätsstr. 27, Bielefeld, Germany
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52
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Alrifai O, Hao X, Marcone MF, Tsao R. Current Review of the Modulatory Effects of LED Lights on Photosynthesis of Secondary Metabolites and Future Perspectives of Microgreen Vegetables. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019; 67:6075-6090. [PMID: 31021630 DOI: 10.1021/acs.jafc.9b00819] [Citation(s) in RCA: 57] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Light-emitting diode (LED) lights have recently been applied in controlled environment agriculture toward growing vegetables of various assortments, including microgreens. Spectral qualities of LED light on photosynthesis in microgreens are currently being studied for their ease of spectral optimization and high photosynthetic efficiency. This review aims to summarize the most recent discoveries and advances in specific phytochemical biosyntheses modulated by LED and other conventional lighting, to identify research gaps, and to provide future perspectives in this emerging multidisciplinary field of research and development. Specific emphasis was made on the effect of light spectral qualities on the biosynthesis of phenolics, carotenoids, and glucosinolates, as these phytochemicals are known for their antioxidant, anti-inflammatory effects, and many health benefits. Future perspectives on enhancing biosynthesis of these bioactives using the rapidly progressing LED light technology are further discussed.
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Affiliation(s)
- Oday Alrifai
- Guelph Research & Development Center , Agriculture and Agri-Food Canada , 93 Stone Road West , Guelph , Ontario N1G 5C9 , Canada
- Department of Food Science, Ontario Agricultural College , University of Guelph , Guelph , Ontario N1G 2W1 , Canada
| | - Xiuming Hao
- Harrow Research & Development Center , Agriculture and Agri-Food Canada , 2585 County Road 20 , Harrow , Ontario N0R 1G0 , Canada
| | - Massimo F Marcone
- Department of Food Science, Ontario Agricultural College , University of Guelph , Guelph , Ontario N1G 2W1 , Canada
| | - Rong Tsao
- Guelph Research & Development Center , Agriculture and Agri-Food Canada , 93 Stone Road West , Guelph , Ontario N1G 5C9 , Canada
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Anoman AD, Flores-Tornero M, Benstein RM, Blau S, Rosa-Téllez S, Bräutigam A, Fernie AR, Muñoz-Bertomeu J, Schilasky S, Meyer AJ, Kopriva S, Segura J, Krueger S, Ros R. Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation. PLANT PHYSIOLOGY 2019; 180:153-170. [PMID: 30787133 PMCID: PMC6501105 DOI: 10.1104/pp.18.01549] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2018] [Accepted: 02/05/2019] [Indexed: 05/19/2023]
Abstract
Although the plant Phosphorylated Pathway of l-Ser Biosynthesis (PPSB) is essential for embryo and pollen development, and for root growth, its metabolic implications have not been fully investigated. A transcriptomics analysis of Arabidopsis (Arabidopsis thaliana) PPSB-deficient mutants at night, when PPSB activity is thought to be more important, suggested interaction with the sulfate assimilation process. Because sulfate assimilation occurs mainly in the light, we also investigated it in PPSB-deficient lines in the day. Key genes in the sulfate starvation response, such as the adenosine 5'phosphosulfate reductase genes, along with sulfate transporters, especially those involved in sulfate translocation in the plant, were induced in the PPSB-deficient lines. However, sulfate content was not reduced in these lines as compared with wild-type plants; besides the glutathione (GSH) steady-state levels in roots of PPSB-deficient lines were even higher than in wild type. This suggested that PPSB deficiency perturbs the sulfate assimilation process between tissues/organs. Alteration of thiol distribution in leaves from different developmental stages, and between aerial parts and roots in plants with reduced PPSB activity, provided evidence supporting this idea. Diminished PPSB activity caused an enhanced flux of 35S into thiol biosynthesis, especially in roots. GSH turnover also accelerated in the PPSB-deficient lines, supporting the notion that not only biosynthesis, but also transport and allocation, of thiols were perturbed in the PPSB mutants. Our results suggest that PPSB is required for sulfide assimilation in specific heterotrophic tissues and that a lack of PPSB activity perturbs sulfur homeostasis between photosynthetic and nonphotosynthetic tissues.
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Affiliation(s)
- Armand D Anoman
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
| | - María Flores-Tornero
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
| | - Ruben M Benstein
- Biocenter - Botanical Institute II, University of Cologne, 50674 Cologne, Germany
- Umeå Plant Science Centre, Department of Plant Physiology, Umeå University, SE-901 87 Umeå, Sweden
| | - Samira Blau
- Biocenter - Botanical Institute II, University of Cologne, 50674 Cologne, Germany
| | - Sara Rosa-Téllez
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
| | - Andrea Bräutigam
- Fakultät für Biologie Gebäude G (CebiTec), Bielefeld University, 33615 Bielefeld, Germany
| | - Alisdair R Fernie
- Max Planck Institut für Molekulare Pflanzenphysiologie, 14476 Potsdam-Golm, Germany
| | - Jesús Muñoz-Bertomeu
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
| | - Sören Schilasky
- INRES-Chemical Signalling, University Bonn, 53113 Bonn, Germany
| | - Andreas J Meyer
- INRES-Chemical Signalling, University Bonn, 53113 Bonn, Germany
| | - Stanislav Kopriva
- Biocenter - Botanical Institute II, University of Cologne, 50674 Cologne, Germany
- Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, 50674 Cologne, Germany
| | - Juan Segura
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
| | - Stephan Krueger
- Biocenter - Botanical Institute II, University of Cologne, 50674 Cologne, Germany
| | - Roc Ros
- Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, 46010 València, Spain
- Estructura de Recerca Interdisciplinar en Biotecnologia i Biomedicina (ERI BIOTECMED), Universitat de València, 46100 Burjassot, Spain
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54
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Höll J, Lindner S, Walter H, Joshi D, Poschet G, Pfleger S, Ziegler T, Hell R, Bogs J, Rausch T. Impact of pulsed UV-B stress exposure on plant performance: How recovery periods stimulate secondary metabolism while reducing adaptive growth attenuation. PLANT, CELL & ENVIRONMENT 2019; 42:801-814. [PMID: 30049021 DOI: 10.1111/pce.13409] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Revised: 07/13/2018] [Accepted: 07/15/2018] [Indexed: 05/20/2023]
Abstract
Upon continuous stress exposure, plants display attenuated metabolic stress responses due to regulatory feedback loops. Here, we have tested the hypothesis that pulsed stress exposure with intervening recovery periods should affect these feedback loops, thereby causing increased accumulation of stress-induced metabolites. The response of Arabidopsis plantlets to continuous UV-B exposure (Cuv ) was compared with that of pulsed UV-B exposure (Puv ). The differential responses to Puv versus Cuv were monitored at the level of gene expression and metabolite accumulation, using wild type (WT) and different mutant lines. In comparison with Cuv , Puv increased sinapyl and flavonol (S + F) content, whereas adaptive growth attenuation was reduced. Furthermore, in a myb4 mutant (AtMYB4, repressor-type R2R3-MYB transcription factor), the S + F content was increased only for Cuv , but not beyond the level for Puv observed in WT. These observations and the ability of AtMYB4 to repress AtMYB12/AtMYB111-mediated activation of target gene promoters (pCHS and pFLS) indicate that the increase of S + F content after Puv observed in WT plants results from reduced feedback inhibition by AtMYB4. The results support the notion that stress-induced metabolic changes not necessarily cause a growth penalty. Furthermore, the observed Puv -induced increase in flavonol accumulation may stimulate reevaluation of commercial plant production practices.
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Affiliation(s)
- Janine Höll
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Sonja Lindner
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Hannah Walter
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Drishti Joshi
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Gernot Poschet
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
- Metabolomics Core Technology Platform, Heidelberg University, Heidelberg, Germany
| | - Sina Pfleger
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Tobias Ziegler
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
| | - Rüdiger Hell
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
- Metabolomics Core Technology Platform, Heidelberg University, Heidelberg, Germany
| | - Jochen Bogs
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
- Dienstleistungszentrum Ländlicher Raum Rheinpfalz, Viticulture and Enology Group, Neustadt, Germany
- Fachhochschule Bingen, Bingen am Rhein, Germany
| | - Thomas Rausch
- Centre for Organismal Studies Heidelberg, Heidelberg University, Heidelberg, Germany
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55
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Transcriptome Analysis of Diurnal Gene Expression in Chinese Cabbage. Genes (Basel) 2019; 10:genes10020130. [PMID: 30754711 PMCID: PMC6409912 DOI: 10.3390/genes10020130] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2018] [Revised: 01/31/2019] [Accepted: 02/04/2019] [Indexed: 12/17/2022] Open
Abstract
Plants have developed timing mechanisms that enable them to maintain synchrony with daily environmental events. These timing mechanisms, i.e., circadian clocks, include transcriptional/translational feedback loops that drive 24 h transcriptional rhythms, which underlie oscillations in protein abundance, thus mediating circadian rhythms of behavior, physiology, and metabolism. Circadian clock genes have been investigated in the diploid model plant Arabidopsis thaliana. Crop plants with polyploid genomes—such as Brassica species—have multiple copies of some clock-related genes. Over the last decade, numerous studies have been aimed at identifying and understanding the function of paralogous genes with conserved sequences, or those that diverged during evolution. Brassica rapa’s triplicate genomes retain sequence-level collinearity with Arabidopsis. In this study, we used RNA sequencing (RNAseq) to profile the diurnal transcriptome of Brassica rapa seedlings. We identified candidate paralogs of circadian clock-related genes and assessed their expression levels. These genes and their related traits that modulate the diurnal rhythm of gene expression contribute to the adaptation of crop cultivars. Our findings will contribute to the mechanistic study of circadian clock regulation inherent in polyploidy genome crops, which differ from those of model plants, and thus will be useful for future breeding studies using clock genes.
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56
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Gallé Á, Czékus Z, Bela K, Horváth E, Ördög A, Csiszár J, Poór P. Plant Glutathione Transferases and Light. FRONTIERS IN PLANT SCIENCE 2019; 9:1944. [PMID: 30687349 PMCID: PMC6333738 DOI: 10.3389/fpls.2018.01944] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Accepted: 12/13/2018] [Indexed: 05/09/2023]
Abstract
The activity and expression of glutathione transferases (GSTs) depend on several less-known endogenous and well-described exogenous factors, such as the developmental stage, presence, and intensity of different stressors, as well as on the absence or presence and quality of light, which to date have received less attention. In this review, we focus on discussing the role of circadian rhythm, light quality, and intensity in the regulation of plant GSTs. Recent studies demonstrate that diurnal regulation can be recognized in GST activity and gene expression in several plant species. In addition, the content of one of their co-substrates, reduced glutathione (GSH), also shows diurnal changes. Darkness, low light or shade mostly reduces GST activity, while high or excess light significantly elevates both the activity and expression of GSTs and GSH levels. Besides the light-regulated induction and dark inactivation of GSTs, these enzymes can also participate in the signal transduction of visible and UV light. For example, red light may alleviate the harmful effects of pathogens and abiotic stressors by increasing GST activity and expression, as well as GSH content in leaves of different plant species. Based on this knowledge, further research on plants (crops and weeds) or organs and temporal regulation of GST activity and gene expression is necessary for understanding the complex regulation of plant GSTs under various light conditions in order to increase the yield and stress tolerance of plants in the changing environment.
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Affiliation(s)
- Ágnes Gallé
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Zalán Czékus
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Krisztina Bela
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Edit Horváth
- Biological Research CentreInstitute of Plant Biology, Szeged, Hungary
| | - Attila Ördög
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Jolán Csiszár
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
| | - Péter Poór
- Department of Plant Biology, Faculty of Science and InformaticsUniversity of Szeged, Szeged, Hungary
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57
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Jeschke V, Weber K, Moore SS, Burow M. Coordination of Glucosinolate Biosynthesis and Turnover Under Different Nutrient Conditions. FRONTIERS IN PLANT SCIENCE 2019; 10:1560. [PMID: 31867028 PMCID: PMC6909823 DOI: 10.3389/fpls.2019.01560] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2019] [Accepted: 11/07/2019] [Indexed: 05/19/2023]
Abstract
Dynamically changing environmental conditions promote a complex regulation of plant metabolism and balanced resource investments to development and defense. Plants of the Brassicales order constitutively allocate carbon, nitrogen, and sulfur to synthesize glucosinolates as their primary defense metabolites. Previous findings support a model in which steady-state levels of glucosinolates in intact tissues are determined by biosynthesis and turnover through a yet uncharacterized turnover pathway. To investigate glucosinolate turnover in the absence of tissue damage, we quantified exogenously applied allyl glucosinolate and endogenous glucosinolates under different nutrient conditions. Our data shows that, in seedlings of Arabidopsis thaliana accession Columbia-0, glucosinolate biosynthesis and turnover are coordinated according to nutrient availability. Whereas exogenous carbon sources had general quantitative effects on glucosinolate accumulation, sulfur or nitrogen limitation resulted in distinct changes in glucosinolate profiles, indicating that these macronutrients provide different regulatory inputs. Raphanusamic acid, a breakdown product that can potentially be formed from all glucosinolate structures appears not to reflect in planta turnover rates, but instead correlates with increased accumulation of endogenous glucosinolates. Thus, raphanusamic acid could represent a metabolic checkpoint that allows glucosinolate-producing plants to measure the flux through the biosynthetic and/or turnover pathways and thereby to dynamically adjust glucosinolate accumulation in response to internal and external signals.
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58
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Trejo-Téllez LI, Estrada-Ortiz E, Gómez-Merino FC, Becker C, Krumbein A, Schwarz D. Flavonoid, Nitrate and Glucosinolate Concentrations in Brassica Species Are Differentially Affected by Photosynthetically Active Radiation, Phosphate and Phosphite. FRONTIERS IN PLANT SCIENCE 2019; 10:371. [PMID: 30972096 PMCID: PMC6445887 DOI: 10.3389/fpls.2019.00371] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Accepted: 03/11/2019] [Indexed: 05/20/2023]
Abstract
We evaluated the effects of phosphate (Pi-deficiency: 0.1 mM; Pi-sufficiency: 0.5 mM), phosphite (low-Phi: 0.1 mM; medium-Phi: 0.5 mM; and high-Phi: 2.5 mM), and two mean daily photosynthetically active radiations (lower PAR: 22.2 mol ⋅ m-2 ⋅ d-1; higher PAR: 29.7 mol ⋅ m-2 ⋅ d-1), as well as their interactions, on flavonoid, nitrate and glucosinolate (GL) concentrations and growth characteristics in hydroponically grown Brassica campestris cv. Mibuna Early and Brassica juncea cv. Red Giant. As expected, higher PAR increased dry matter and contrariwise decreased number of leaves but only in B. campestris. Total flavonoid and individual flavonoid compounds increased with the higher PAR value in B. campestris. Pi-sufficiency resulted in a lower quercetin concentration in both species, the isorhamnetin and total flavonoid concentrations in B. campestris, and the cyanidin concentration in B. juncea, in comparison to Pi-deficiency. Similarly, Pi-sufficient plants exhibited lower GL concentration, especially alkyl-GLs in B. campestris and alkenyl-GLs and an aryl-GL in B. juncea. Pi did not affect the nitrate concentration in either species, and nor did Phi influence the flavonoid concentrations in either species. In B. campestris, medium Phi (0.5 mM) increased the 1-methoxyindol-3-ylmethyl GL concentration by 28.3%, as compared to that observed at low Phi. In B. juncea, high Phi level increased the but-3-enyl-GL concentration by 18.9%, in comparison to values recorded at medium Phi. B. campestris plants exposed to higher PAR increased total flavonoids concentration. In both Brassica species, higher PAR stimulated the alkyl-, alkenyl-, and indole-GLs. The interaction of lower PAR and increasing Phi significantly decreased flavonoid concentration in B. juncea, whereas increasing Phi at higher PAR increased such concentration in this species. The same combination reduced the concentration of 2-phenylethyl- and indol-3-ylmethyl-GL in B. juncea. The highest indol-3-ylmethyl-GL concentration was observed when Pi was deficient combined with medium Phi in B. juncea. Thus, PAR, Pi and Phi may modulate flavonoid, GL and nitrate concentrations in Brassica species, which may be a useful tool to improve the nutraceutical quality of these leafy vegetables if properly managed.
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Affiliation(s)
| | | | | | - Christine Becker
- Department of Crop Protection, Hochschule Geisenheim University, Geisenheim, Germany
| | - Angelika Krumbein
- Leibniz Institute of Vegetable and Ornamental Crops, Großbeeren, Germany
| | - Dietmar Schwarz
- Leibniz Institute of Vegetable and Ornamental Crops, Großbeeren, Germany
- *Correspondence: Dietmar Schwarz,
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Folta KM. Breeding new varieties for controlled environments. PLANT BIOLOGY (STUTTGART, GERMANY) 2019; 21 Suppl 1:6-12. [PMID: 0 DOI: 10.1111/plb.12914] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2018] [Accepted: 09/13/2018] [Indexed: 05/15/2023]
Abstract
Agricultural production in controlled environments is increasingly feasible, and may play an important role in providing nutrition and choice to growing urban centres. New technologies in lighting, ventilation, robotics and irrigation are just a few of the innovations that enable production of high-value specialty crops outside of a traditional field setting. However, despite all of the advances in the hardware within the plant factory operation, innovation of the most complex machine has been neglected - the plant itself. Indoor agricultural operations typically rely on legacy varieties, plants selected and bred for field conditions. In the field, phenotypic stability is paramount, as production must be consistent in an unpredictable and changing environment. However, the controlled environment affords focus on different breeding priorities as environmental flux, pests, pathogens and post-harvest quality are less formidable barriers to production. On the contrary, breeding for controlled environments shifts the focus to a completely different set of plant traits, such as rapid growth, performance in low light environments and active manipulation of plant stature. Instead of breeding for phenotypic stability, plants may be bred to maximise genetic plasticity, allowing specific traits to be presented as a function of the quality of the ambient light spectrum. In this scenario plant varieties may be grown with optimal size, supporting a focus on consumer traits like flavour or accumulation of health-related compounds. Gene editing may be a central technology in the production of designer plants for controlled environments. This review considers the opportunity for breeding for controlled environments, with a focus on a revision of priorities for controlled-environment breeders.
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Affiliation(s)
- K M Folta
- Horticultural Sciences Department, 1251 Fifield Hall, University of Florida, Gainesville, FL, USA
- Graduate Program in Plant Molecular and Cellular Biology, University of Florida, Gainesville, FL, USA
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60
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Sugiyama R, Hirai MY. Atypical Myrosinase as a Mediator of Glucosinolate Functions in Plants. FRONTIERS IN PLANT SCIENCE 2019; 10:1008. [PMID: 31447873 PMCID: PMC6691170 DOI: 10.3389/fpls.2019.01008] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Accepted: 07/18/2019] [Indexed: 05/04/2023]
Abstract
Glucosinolates (GLSs) are a well-known class of specialized plant metabolites, distributed mostly in the order Brassicales. A vast research field in basic and applied sciences has grown up around GLSs owing to their presence in important agricultural crops and the model plant Arabidopsis thaliana, and their broad range of bioactivities beneficial to human health. The major purpose of GLSs in plants has been considered their function as a chemical defense against predators. GLSs are physically separated from a specialized class of beta-thioglucosidases called myrosinases, at the tissue level or at the single-cell level. They are brought together as a consequence of tissue damage, primarily triggered by herbivores, and their interaction results in the release of toxic volatile chemicals including isothiocyanates. In addition, recent studies have suggested that plants may adopt other strategies independent of tissue disruption for initiating GLS breakdown to cope with certain biotic/abiotic stresses. This hypothesis has been further supported by the discovery of an atypical class of GLS-hydrolyzing enzymes possessing features that are distinct from those of the classical myrosinases. Nevertheless, there is only little information on the physiological importance of atypical myrosinases. In this review, we focus on the broad diversity of the beta-glucosidase subclasses containing known atypical myrosinases in A. thaliana to discuss the hypothesis that numerous members of these subclasses can hydrolyze GLSs to regulate their diverse functions in plants. Also, the increasingly broadening functional repertoires of known atypical/classical myrosinases are described with reference to recent findings. Assessment of independent insights gained from A. thaliana with respect to (1) the phenotype of mutants lacking genes in the GLS metabolic/breakdown pathways, (2) fluctuation in GLS contents/metabolism under specific conditions, and (3) the response of plants to exogenous GLSs or their hydrolytic products, will enable us to reconsider the physiological importance of GLS breakdown in particular situations, which is likely to be regulated by specific beta-glucosidases.
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61
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Samuilov S, Rademacher N, Brilhaus D, Flachbart S, Arab L, Kopriva S, Weber APM, Mettler-Altmann T, Rennenberg H. Knock-Down of the Phosphoserine Phosphatase Gene Effects Rather N- Than S-Metabolism in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2018; 9:1830. [PMID: 30619403 PMCID: PMC6297848 DOI: 10.3389/fpls.2018.01830] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Accepted: 11/26/2018] [Indexed: 05/24/2023]
Abstract
The aim of present study was to elucidate the significance of the phosphorylated pathway of Ser production for Cys biosynthesis in leaves at day and night and upon cadmium (Cd) exposure. For this purpose, Arabidopsis wildtype plants as control and its psp mutant knocked-down in phosphoserine phosphatase (PSP) were used to test if (i) photorespiratory Ser is the dominant precursor of Cys synthesis in autotrophic tissue in the light, (ii) the phosphorylated pathway of Ser production can take over Ser biosynthesis in leaves at night, and (iii) Cd exposure stimulates Cys and glutathione (GSH) biosynthesis and effects the crosstalk of S and N metabolism, irrespective of the Ser source. Glycine (Gly) and Ser contents were not affected by reduction of the psp transcript level confirming that the photorespiratory pathway is the main route of Ser synthesis. The reduction of the PSP transcript level in the mutant did not affect day/night regulation of sulfur fluxes while day/night fluctuation of sulfur metabolite amounts were no longer observed, presumably due to slower turnover of sulfur metabolites in the mutant. Enhanced contents of non-protein thiols in both genotypes and of GSH only in the psp mutant were observed upon Cd treatment. Mutation of the phosphorylated pathway of Ser biosynthesis caused an accumulation of alanine, aspartate, lysine and a decrease of branched-chain amino acids. Knock-down of the PSP gene induced additional defense mechanisms against Cd toxicity that differ from those of WT plants.
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Affiliation(s)
- Sladjana Samuilov
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany
| | - Nadine Rademacher
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Dominik Brilhaus
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Samantha Flachbart
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Leila Arab
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany
| | - Stanislav Kopriva
- Botanical Institute, Cluster of Excellence on Plant Sciences, University of Cologne, Cologne, Germany
| | - Andreas P. M. Weber
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Tabea Mettler-Altmann
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany
- College of Science, King Saud University, Riyadh, Saudi Arabia
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Samuilov S, Brilhaus D, Rademacher N, Flachbart S, Arab L, Alfarraj S, Kuhnert F, Kopriva S, Weber APM, Mettler-Altmann T, Rennenberg H. The Photorespiratory BOU Gene Mutation Alters Sulfur Assimilation and Its Crosstalk With Carbon and Nitrogen Metabolism in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2018; 9:1709. [PMID: 30559749 PMCID: PMC6284229 DOI: 10.3389/fpls.2018.01709] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/07/2018] [Accepted: 11/02/2018] [Indexed: 05/24/2023]
Abstract
This study was aimed at elucidating the significance of photorespiratory serine (Ser) production for cysteine (Cys) biosynthesis. For this purpose, sulfur (S) metabolism and its crosstalk with nitrogen (N) and carbon (C) metabolism were analyzed in wildtype Arabidopsis and its photorespiratory bou-2 mutant with impaired glycine decarboxylase (GDC) activity. Foliar glycine and Ser contents were enhanced in the mutant at day and night. The high Ser levels in the mutant cannot be explained by transcript abundances of genes of the photorespiratory pathway or two alternative pathways of Ser biosynthesis. Despite enhanced foliar Ser, reduced GDC activity mediated a decline in sulfur flux into major sulfur pools in the mutant, as a result of deregulation of genes of sulfur reduction and assimilation. Still, foliar Cys and glutathione contents in the mutant were enhanced. The use of Cys for methionine and glucosinolates synthesis was reduced in the mutant. Reduced GDC activity in the mutant downregulated Calvin Cycle and nitrogen assimilation genes, upregulated key enzymes of glycolysis and the tricarboxylic acid (TCA) pathway and modified accumulation of sugars and TCA intermediates. Thus, photorespiratory Ser production can be replaced by other metabolic Ser sources, but this replacement deregulates the cross-talk between S, N, and C metabolism.
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Affiliation(s)
- Sladjana Samuilov
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg im Breisgau, Germany
| | - Dominik Brilhaus
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Nadine Rademacher
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Samantha Flachbart
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Leila Arab
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg im Breisgau, Germany
| | - Saleh Alfarraj
- College of Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Franziska Kuhnert
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Stanislav Kopriva
- Botanical Institute, Cluster of Excellence on Plant Sciences, University of Cologne, Cologne, Germany
| | - Andreas P. M. Weber
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Tabea Mettler-Altmann
- Institute of Plant Biochemistry, Cluster of Excellence on Plant Sciences, Heinrich Heine University, Düsseldorf, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg im Breisgau, Germany
- College of Sciences, King Saud University, Riyadh, Saudi Arabia
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Brandt S, Fachinger S, Tohge T, Fernie AR, Braun HP, Hildebrandt TM. Extended darkness induces internal turnover of glucosinolates in Arabidopsis thaliana leaves. PLoS One 2018; 13:e0202153. [PMID: 30092103 PMCID: PMC6084957 DOI: 10.1371/journal.pone.0202153] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2018] [Accepted: 07/27/2018] [Indexed: 11/20/2022] Open
Abstract
Prolonged darkness leads to carbohydrate starvation, and as a consequence plants degrade proteins and lipids to oxidize amino acids and fatty acids as alternative substrates for mitochondrial ATP production. We investigated, whether the internal breakdown of glucosinolates, a major class of sulfur-containing secondary metabolites, might be an additional component of the carbohydrate starvation response in Arabidopsis thaliana (A. thaliana). The glucosinolate content of A. thaliana leaves was strongly reduced after seven days of darkness. We also detected a significant increase in the activity of myrosinase, the enzyme catalyzing the initial step in glucosinolate breakdown, coinciding with a strong induction of the main leaf myrosinase isoforms TGG1 and TGG2. In addition, nitrilase activity was increased suggesting a turnover via nitriles and carboxylic acids. Internal degradation of glucosinolates might also be involved in diurnal or developmental adaptations of the glucosinolate profile. We observed a diurnal rhythm for myrosinase activity in two-week-old plants. Furthermore, leaf myrosinase activity and protein abundance of TGG2 varied during plant development, whereas leaf protein abundance of TGG1 remained stable indicating regulation at the transcriptional as well as post-translational level.
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Affiliation(s)
- Saskia Brandt
- Institut für Pflanzengenetik, Leibniz Universität Hannover, Hannover, Germany
| | - Sara Fachinger
- Institut für Pflanzengenetik, Leibniz Universität Hannover, Hannover, Germany
| | - Takayuki Tohge
- Max-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
| | - Alisdair R. Fernie
- Max-Planck-Institute of Molecular Plant Physiology, Potsdam-Golm, Germany
| | - Hans-Peter Braun
- Institut für Pflanzengenetik, Leibniz Universität Hannover, Hannover, Germany
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64
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Doheny-Adams T, Lilley CJ, Barker A, Ellis S, Wade R, Atkinson HJ, Urwin PE, Redeker K, Hartley SE. Constant Isothiocyanate-Release Potentials across Biofumigant Seeding Rates. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2018; 66:5108-5116. [PMID: 29624055 DOI: 10.1021/acs.jafc.7b04610] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Biofumigation is an integrated pest-management method involving the mulching of a glucosinolate-containing cover crop into a field in order to generate toxic isothiocyanates (ITCs), which are effective soil-borne-pest-control compounds. Variation in biofumigation efficacy demonstrates a need to better understand the factors affecting pest-control outcomes and develop best practices for choosing biofumigants, growth conditions, and mulching methods that allow the greatest potential isothiocyanate release. We measured the glucosinolate concentrations of six different commercial varieties of three biofumigant plant species: Brassica juncea (ISCI99, Vitasso, and Scala) Raphanus sativus (Diablo and Bento), and Sinapis alba (Ida Gold). The plants were grown in the range of commercially appropriate seeding rates and sampled at three growth stages (early development, mature, and 50% flowering). Within biofumigant species, the highest ITC-release potentials were achieved with B. juncea cv. ISCI99 and R. sativus cv. Bento. The highest ITC-release potential occurred at the 50% flowering growth stage across the species. The seeding rate had a minor impact on the ITC-release potential of R. sativus but had no significant effects on the ITC-release potentials of the B. juncea or S. alba cultivars.
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Affiliation(s)
- T Doheny-Adams
- Department of Biology , University of York , York YO10 5DD , England
| | - C J Lilley
- Faculty of Biological Sciences , University of Leeds , Leeds LS2 9JT , England
| | - A Barker
- Barworth Agriculture Ltd. , Sleaford NG34 9NB , England
| | - S Ellis
- Department of Biology , University of York , York YO10 5DD , England
| | - R Wade
- Department of Biology , University of York , York YO10 5DD , England
| | - H J Atkinson
- Faculty of Biological Sciences , University of Leeds , Leeds LS2 9JT , England
| | - P E Urwin
- Faculty of Biological Sciences , University of Leeds , Leeds LS2 9JT , England
| | - K Redeker
- Department of Biology , University of York , York YO10 5DD , England
| | - S E Hartley
- Department of Biology , University of York , York YO10 5DD , England
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Comparison of the Relative Potential for Epigenetic and Genetic Variation To Contribute to Trait Stability. G3-GENES GENOMES GENETICS 2018; 8:1733-1746. [PMID: 29563187 PMCID: PMC5940164 DOI: 10.1534/g3.118.200127] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
The theoretical ability of epigenetic variation to influence the heritable variation of complex traits is gaining traction in the study of adaptation. This theory posits that epigenetic marks can control adaptive phenotypes but the relative potential of epigenetic variation in comparison to genetic variation in these traits is not presently understood. To compare the potential of epigenetic and genetic variation in adaptive traits, we analyzed the influence of DNA methylation variation on the accumulation of chemical defense compounds glucosinolates from the order Brassicales. Several decades of work on glucosinolates has generated extensive knowledge about their synthesis, regulation, genetic variation and contribution to fitness establishing this pathway as a model pathway for complex adaptive traits. Using high-throughput phenotyping with a randomized block design of ddm1 derived Arabidopsis thaliana epigenetic Recombinant Inbred Lines, we measured the correlation between DNA methylation variation and mean glucosinolate variation and within line stochastic variation. Using this information, we identified epigenetic Quantitative Trait Loci that contained specific Differentially Methylated Regions associated with glucosinolate traits. This showed that variation in DNA methylation correlates both with levels and variance of glucosinolates and flowering time with trait-specific loci. By conducting a meta-analysis comparing the results to different genetically variable populations, we conclude that the influence of DNA methylation variation on these adaptive traits is much lower than the corresponding impact of standing genetic variation. As such, selective pressure on these traits should mainly affect standing genetic variation to lead to adaptation.
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Mølmann JA, Hagen SF, Bengtsson GB, Johansen TJ. Influence of high latitude light conditions on sensory quality and contents of health and sensory-related compounds in swede roots (Brassica napus L. ssp. rapifera Metzg.). JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2018; 98:1117-1123. [PMID: 28732144 DOI: 10.1002/jsfa.8562] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2016] [Revised: 06/05/2017] [Accepted: 07/15/2017] [Indexed: 06/07/2023]
Abstract
BACKGROUND Vegetable growers in Arctic areas must increasingly rely on market strategies based on regional origin and product quality. Swede roots (rutabaga) were grown in a phytotron to investigate the effect of high latitude light conditions on sensory quality and some health and sensory-related compounds. Experimental treatments included modifications of 24 h natural day length (69° 39' N) by moving plants at daily intervals to dark chambers with either no light, fluorescent growth light and/or low intensity photoperiod extension. RESULTS Shortening the photosynthetic light period to 12 h produced smaller roots than 15.7 h and 18 h, with highest scores for bitter and sulfur taste, and lowest scores for sweetness, acidic taste and fibrousness. The photoperiod in combination with the photosynthetic light period also had an influence on glucosinolate (GLS) contents, with lowest concentrations in 24 h natural light and highest in 12 h natural light. Concentrations of vitamin C, glucose, fructose and sucrose were not significantly influenced by any of the treatments. CONCLUSION High latitude light conditions, with long photosynthetic light periods and 24 h photoperiod, can enhance sweet/less bitter taste and reduce GLS contents in swede roots, compared to growth under short day conditions. This influence of light conditions on eating quality may benefit marketing of regional products from high latitudes. © 2017 Society of Chemical Industry.
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Affiliation(s)
| | - Sidsel Fiskaa Hagen
- Nofima - Norwegian Institute for Food, Fisheries and Aquaculture Research, Ås, Norway
| | - Gunnar B Bengtsson
- Nofima - Norwegian Institute for Food, Fisheries and Aquaculture Research, Ås, Norway
| | - Tor J Johansen
- NIBIO - Norwegian Institute of Bioeconomy Research, Ås, Norway
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67
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Sørensen M, Neilson EHJ, Møller BL. Oximes: Unrecognized Chameleons in General and Specialized Plant Metabolism. MOLECULAR PLANT 2018; 11:95-117. [PMID: 29275165 DOI: 10.1016/j.molp.2017.12.014] [Citation(s) in RCA: 72] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2017] [Revised: 12/11/2017] [Accepted: 12/14/2017] [Indexed: 05/19/2023]
Abstract
Oximes (R1R2C=NOH) are nitrogen-containing chemical constituents that are formed in species representing all kingdoms of life. In plants, oximes are positioned at important metabolic bifurcation points between general and specialized metabolism. The majority of plant oximes are amino acid-derived metabolites formed by the action of a cytochrome P450 from the CYP79 family. Auxin, cyanogenic glucosides, glucosinolates, and a number of other bioactive specialized metabolites including volatiles are produced from oximes. Oximes with the E configuration have high biological activity compared with Z-oximes. Oximes or their derivatives have been demonstrated or proposed to play roles in growth regulation, plant defense, pollinator attraction, and plant communication with the surrounding environment. In addition, oxime-derived products may serve as quenchers of reactive oxygen species and storage compounds for reduced nitrogen that may be released on demand by the activation of endogenous turnover pathways. As highly bioactive molecules, chemically synthesized oximes have found versatile uses in many sectors of society, especially in the agro- and medical sectors. This review provides an update on the structural diversity, occurrence, and biosynthesis of oximes in plants and discusses their role as key players in plant general and specialized metabolism.
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Affiliation(s)
- Mette Sørensen
- Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, Copenhagen, Denmark; VILLUM Center for Plant Plasticity, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, Copenhagen, Denmark
| | - Elizabeth H J Neilson
- Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, Copenhagen, Denmark; VILLUM Center for Plant Plasticity, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, Copenhagen, Denmark
| | - Birger Lindberg Møller
- Plant Biochemistry Laboratory, Department of Plant and Environmental Sciences, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, Copenhagen, Denmark; VILLUM Center for Plant Plasticity, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, Copenhagen, Denmark; Center for Synthetic Biology, University of Copenhagen, Thorvaldsensvej 40, Frederiksberg C, Copenhagen, Denmark.
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68
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The Importance of Experimental Design, Quality Assurance, and Control in Plant Metabolomics Experiments. Methods Mol Biol 2018; 1778:3-17. [PMID: 29761427 DOI: 10.1007/978-1-4939-7819-9_1] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
The output of metabolomics relies to a great extent upon the methods and instrumentation to identify, quantify, and access spatial information on as many metabolites as possible. However, the most modern machines and sophisticated tools for data analysis cannot compensate for inappropriate harvesting and/or sample preparation procedures that modify metabolic composition and can lead to erroneous interpretation of results. In addition, plant metabolism has a remarkable degree of complexity, and the number of identified compounds easily surpasses the number of samples in metabolomics analyses, increasing false discovery risk. These aspects pose a large challenge when carrying out plant metabolomics experiments. In this chapter, we address the importance of a proper experimental design taking into consideration preventable complications and unavoidable factors to achieve success in metabolomics analysis. We also focus on quality control and standardized procedures during the metabolomics workflow.
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69
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Ciska E, Horbowicz M, Rogowska M, Kosson R, Drabińska N, Honke J. Evaluation of Seasonal Variations in the Glucosinolate Content in Leaves and Roots of Four European Horseradish (Armoracia rusticana) Landraces. POL J FOOD NUTR SCI 2017. [DOI: 10.1515/pjfns-2016-0029] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
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70
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Miao HY, Wang MY, Chang JQ, Tao H, Sun B, Wang QM. Effects of glucose and gibberellic acid on glucosinolate content and antioxidant properties of Chinese kale sprouts. J Zhejiang Univ Sci B 2017; 18:1093-1100. [PMID: 29204989 PMCID: PMC5742292 DOI: 10.1631/jzus.b1700308] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2017] [Accepted: 08/14/2017] [Indexed: 01/04/2023]
Abstract
Glucosinolates, anthocyanins, total phenols, and vitamin C, as well as antioxidant capacity, were investigated in Chinese kale sprouts treated with both glucose and gibberellic acid (GA3). The combination of 3% (0.03 g/ml) glucose and 5 μmol/L GA3 treatment was effective in increasing glucosinolate content while glucose or GA3 treatment alone did not influence significantly almost all individual glucosinolates or total glucosinolates. The total phenolic content and antioxidant activity of Chinese kale sprouts were enhanced by combined treatment with glucose and GA3, which could be useful in improving the main health-promoting compounds and antioxidant activity in Chinese kale sprouts.
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Affiliation(s)
- Hui-ying Miao
- Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Department of Horticulture, Zhejiang University, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, Hangzhou 310058, China
| | - Meng-yu Wang
- Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Department of Horticulture, Zhejiang University, Hangzhou 310058, China
| | - Jia-qi Chang
- Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Department of Horticulture, Zhejiang University, Hangzhou 310058, China
| | - Han Tao
- Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Department of Horticulture, Zhejiang University, Hangzhou 310058, China
| | - Bo Sun
- College of Horticulture, Sichuan Agricultural University, Chengdu 611130, China
| | - Qiao-mei Wang
- Key Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Department of Horticulture, Zhejiang University, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Horticultural Plant Integrative Biology, Hangzhou 310058, China
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71
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Cui ML, Yang HY, He GQ. Apoptosis induction of colorectal cancer cells HTL-9 in vitro by the transformed products of soybean isoflavones by Ganoderma lucidum. J Zhejiang Univ Sci B 2017; 18:1101-1112. [PMID: 29204990 PMCID: PMC5742293 DOI: 10.1631/jzus.b1700189] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2017] [Accepted: 06/08/2017] [Indexed: 12/15/2022]
Abstract
Soybean isoflavones have been one of the potential preventive candidates for antitumor research in recent years. In this paper, we first studied the transformation of soybean isoflavones with the homogenized slurry of Ganoderma lucidum. The resultant transformed products (TSI) contained (703.21±4.35) mg/g of genistein, with transformed rates of 96.63% and 87.82% of daidzein and genistein, respectively, and TSI also could enrich the bioactive metabolites of G. lucidum. The antitumor effects of TSI on human colorectal cancer cell line HTL-9, human breast cancer cell line MCF-7, and human immortalized gastric epithelial cell line GES-1 were also studied. The 3-(4,5-dimethyl-2-thiazolyl)-2,5-diphenyl-2-H-tetrazolium bromide (MTT) assay showed that TSI could dramatically reduce the viability rates of HTL-9 cells and MCF-7 cells without detectable cytotoxicity on GES-1 normal cells when the TSI concentration was lower than 100 μg/ml. With 100 μg/ml of TSI, HTL-9 cells were arrested in the G1 phase, and late-apoptosis was primarily induced, accompanied with partial early-apoptosis. TSI could induce primarily early-apoptosis by arresting cells in the G1 phase of MCF-7 cells. For HTL-9 cells, Western-blot and reverse-transcriptase polymerase chain reaction (RT-PCR) analysis showed that TSI (100 μg/ml) can up-regulate the expression of Bax, Caspase-3, Caspase-8, and cytochrome c (Cyto-c), indicating that TSI could induce cell apoptosis mainly through the mitochondrial pathway. In addition, the expression of p53 was up-regulated, while the expression of Survivin and nuclear factor κB (NF-κB) was down-regulated. All these results showed that TSI could induce apoptosis of HTL-9 cells by the regulation of multiple apoptosis-related genes.
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Affiliation(s)
- Mei-lin Cui
- College of Food Science, Shanxi Normal University, Linfen 041004, China
| | - Huan-yi Yang
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Food Microbiology, Zhejiang University, Hangzhou 310058, China
| | - Guo-qing He
- College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou 310058, China
- Zhejiang Provincial Key Laboratory of Food Microbiology, Zhejiang University, Hangzhou 310058, China
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Bell L, Wagstaff C. Enhancement Of Glucosinolate and Isothiocyanate Profiles in Brassicaceae Crops: Addressing Challenges in Breeding for Cultivation, Storage, and Consumer-Related Traits. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2017; 65:9379-9403. [PMID: 28968493 DOI: 10.1021/acs.jafc.7b03628] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Glucosinolates (GSLs) and isothiocyanates (ITCs) produced by Brassicaceae plants are popular targets for analysis due to the health benefits associated with them. Breeders aim to increase the concentrations in commercial varieties; however, there are few examples of this. The most well-known is Beneforté broccoli, which has increased glucoraphanin/sulforaphane concentrations compared to those of conventional varieties. It was developed through traditional breeding methods with considerations for processing, consumption, and health made throughout this process. Many studies presented in the literature do not take a holistic approach, and key points about breeding, cultivation methods, postharvest storage, sensory attributes, and consumer preferences are not properly taken into account. In this review, we draw together data for multiple species and address how such factors can influence GSL profiles. We encourage researchers and institutions to engage with industry and consumers to produce research that can be utilized in the improvement of Brassicaceae crops.
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Affiliation(s)
- Luke Bell
- Department of Food & Nutritional Sciences, University of Reading , Whiteknights, Reading, Berkshire RG6 6AP, United Kingdom
| | - Carol Wagstaff
- Department of Food & Nutritional Sciences, University of Reading , Whiteknights, Reading, Berkshire RG6 6AP, United Kingdom
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73
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Seo MS, Kim JS. Understanding of MYB Transcription Factors Involved in Glucosinolate Biosynthesis in Brassicaceae. Molecules 2017; 22:molecules22091549. [PMID: 28906468 PMCID: PMC6151624 DOI: 10.3390/molecules22091549] [Citation(s) in RCA: 47] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2017] [Revised: 09/08/2017] [Accepted: 09/12/2017] [Indexed: 02/06/2023] Open
Abstract
Glucosinolates (GSLs) are widely known secondary metabolites that have anticarcinogenic and antioxidative activities in humans and defense roles in plants of the Brassicaceae family. Some R2R3-type MYB (myeloblastosis) transcription factors (TFs) control GSL biosynthesis in Arabidopsis. However, studies on the MYB TFs involved in GSL biosynthesis in Brassica species are limited because of the complexity of the genome, which includes an increased number of paralog genes as a result of genome duplication. The recent completion of the genome sequencing of the Brassica species permits the identification of MYB TFs involved in GSL biosynthesis by comparative genome analysis with A. thaliana. In this review, we describe various findings on the regulation of GSL biosynthesis in Brassicaceae. Furthermore, we identify 63 orthologous copies corresponding to five MYB TFs from Arabidopsis, except MYB76 in Brassica species. Fifty-five MYB TFs from the Brassica species possess a conserved amino acid sequence in their R2R3 MYB DNA-binding domain, and share close evolutionary relationships. Our analysis will provide useful information on the 55 MYB TFs involved in the regulation of GSL biosynthesis in Brassica species, which have a polyploid genome.
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Affiliation(s)
- Mi-Suk Seo
- Genomics Division, Department of Agricultural Bio-Resources, National Institute of Agricultural Sciences, Rural Development Administration, Wansan-gu, Jeonju 54874, Korea.
| | - Jung Sun Kim
- Genomics Division, Department of Agricultural Bio-Resources, National Institute of Agricultural Sciences, Rural Development Administration, Wansan-gu, Jeonju 54874, Korea.
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van Tol N, Rolloos M, Pinas JE, Henkel CV, Augustijn D, Hooykaas PJJ, van der Zaal BJ. Enhancement of Arabidopsis growth characteristics using genome interrogation with artificial transcription factors. PLoS One 2017; 12:e0174236. [PMID: 28358915 PMCID: PMC5373528 DOI: 10.1371/journal.pone.0174236] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2016] [Accepted: 03/06/2017] [Indexed: 11/18/2022] Open
Abstract
The rapidly growing world population has a greatly increasing demand for plant biomass, thus creating a great interest in the development of methods to enhance the growth and biomass accumulation of crop species. In this study, we used zinc finger artificial transcription factor (ZF-ATF)-mediated genome interrogation to manipulate the growth characteristics and biomass of Arabidopsis plants. We describe the construction of two collections of Arabidopsis lines expressing fusions of three zinc fingers (3F) to the transcriptional repressor motif EAR (3F-EAR) or the transcriptional activator VP16 (3F-VP16), and the characterization of their growth characteristics. In total, six different 3F-ATF lines with a consistent increase in rosette surface area (RSA) of up to 55% were isolated. For two lines we demonstrated that 3F-ATF constructs function as dominant in trans acting causative agents for an increase in RSA and biomass, and for five larger plant lines we have investigated 3F-ATF induced transcriptomic changes. Our results indicate that genome interrogation can be used as a powerful tool for the manipulation of plant growth and biomass and that it might supply novel cues for the discovery of genes and pathways involved in these properties.
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Affiliation(s)
- Niels van Tol
- Institute of Biology Leiden, Faculty of Science, Leiden University, Leiden, The Netherlands
- BioSolar Cells, Wageningen, The Netherlands
| | - Martijn Rolloos
- Institute of Biology Leiden, Faculty of Science, Leiden University, Leiden, The Netherlands
| | - Johan E. Pinas
- Institute of Biology Leiden, Faculty of Science, Leiden University, Leiden, The Netherlands
| | - Christiaan V. Henkel
- Institute of Biology Leiden, Faculty of Science, Leiden University, Leiden, The Netherlands
| | - Dieuwertje Augustijn
- Leiden Institute of Chemistry, Faculty of Science, Leiden University, Leiden, The Netherlands
| | - Paul J. J. Hooykaas
- Institute of Biology Leiden, Faculty of Science, Leiden University, Leiden, The Netherlands
| | - Bert J. van der Zaal
- Institute of Biology Leiden, Faculty of Science, Leiden University, Leiden, The Netherlands
- * E-mail:
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Augustine R, Bisht NC. Regulation of Glucosinolate Metabolism: From Model Plant Arabidopsis thaliana to Brassica Crops. REFERENCE SERIES IN PHYTOCHEMISTRY 2017. [DOI: 10.1007/978-3-319-25462-3_3] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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Misra BB, Yin Z, Geng S, de Armas E, Chen S. Metabolomic Responses of Arabidopsis Suspension Cells to Bicarbonate under Light and Dark Conditions. Sci Rep 2016; 6:35778. [PMID: 27762345 PMCID: PMC5071901 DOI: 10.1038/srep35778] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2016] [Accepted: 10/05/2016] [Indexed: 11/25/2022] Open
Abstract
Global CO2 level presently recorded at 400 ppm is expected to reach 550 ppm in 2050, an increment likely to impact plant growth and productivity. Using targeted LC-MS and GC-MS platforms we quantified 229 and 29 metabolites, respectively in a time-course study to reveal short-term responses to different concentrations (1, 3, and 10 mM) of bicarbonate (HCO3−) under light and dark conditions. Results indicate that HCO3− treatment responsive metabolomic changes depend on the HCO3− concentration, time of treatment, and light/dark. Interestingly, 3 mM HCO3− concentration treatment induced more significantly changed metabolites than either lower or higher concentrations used. Flavonoid biosynthesis and glutathione metabolism were common to both light and dark-mediated responses in addition to showing concentration-dependent changes. Our metabolomics results provide insights into short-term plant cellular responses to elevated HCO3− concentrations as a result of ambient increases in CO2 under light and dark.
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Affiliation(s)
- Biswapriya B Misra
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA
| | - Zepeng Yin
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA.,Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China
| | - Sisi Geng
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA
| | - Evaldo de Armas
- Training Institute, Thermo Fisher Scientific, 1400 North point Parkway, Ste 10., West Palm Beach, FL 33407, USA
| | - Sixue Chen
- Department of Biology, Genetics Institute, Plant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL 32610, USA.,Interdisciplinary Center for Biotechnology Research, University of Florida, Gainesville, FL 32610, USA
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Baek SA, Jung YH, Lim SH, Park SU, Kim JK. Metabolic Profiling in Chinese Cabbage (Brassica rapa L. subsp. pekinensis) Cultivars Reveals that Glucosinolate Content Is Correlated with Carotenoid Content. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2016; 64:4426-4434. [PMID: 27172980 DOI: 10.1021/acs.jafc.6b01323] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
A total of 38 bioactive compounds, including glucosinolates, carotenoids, tocopherols, sterols, and policosanols, were characterized from nine varieties of Chinese cabbage (Brassica rapa L. subsp. pekinensis) to determine their phytochemical diversity and analyze their abundance relationships. The metabolite profiles were evaluated with principal component analysis (PCA), Pearson correlation analysis, and hierarchical clustering analysis (HCA). PCA and HCA identified two distinct varieties of Chinese cabbage (Cheonsangcheonha and Waldongcheonha) with higher levels of glucosinolates and carotenoids. Pairwise comparisons of the 38 metabolites were calculated using Pearson correlation coefficients. The HCA, which used the correlation coefficients, clustered metabolites that are derived from closely related biochemical pathways. Significant correlations were discovered between chlorophyll and carotenoids. Additionally, aliphatic glucosinolate and carotenoid levels were positively correlated. The Cheonsangcheonha and Waldongcheonha varieties appear to be good candidates for breeding because they have high glucosinolate and carotenoid levels.
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Affiliation(s)
- Seung-A Baek
- Division of Life Sciences, College of Life Sciences and Bioengineering, Incheon National University , Incheon 22012, Republic of Korea
| | - Young-Ho Jung
- Biotechnology Institute, Nongwoo Bio Company, Limited , Yeoju, Gyeonggi 12655, Republic of Korea
| | - Sun-Hyung Lim
- National Academy of Agricultural Science, Rural Development Administration , Jeonju 54874, Republic of Korea
| | - Sang Un Park
- Department of Crop Science, Chungnam National University , 99 Daehak-Ro, Yuseong-gu, Daejeon 34134, Republic of Korea
| | - Jae Kwang Kim
- Division of Life Sciences, College of Life Sciences and Bioengineering, Incheon National University , Incheon 22012, Republic of Korea
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78
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Ermert AL, Mailliet K, Hughes J. Holophytochrome-Interacting Proteins in Physcomitrella: Putative Actors in Phytochrome Cytoplasmic Signaling. FRONTIERS IN PLANT SCIENCE 2016; 7:613. [PMID: 27242820 PMCID: PMC4867686 DOI: 10.3389/fpls.2016.00613] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/01/2016] [Accepted: 04/21/2016] [Indexed: 05/26/2023]
Abstract
Phytochromes are the principle photoreceptors in light-regulated plant development, primarily acting via translocation of the light-activated photoreceptor into the nucleus and subsequent gene regulation. However, several independent lines of evidence indicate unambiguously that an additional cytoplasmic signaling mechanism must exist. Directional responses in filament tip cells of the moss Physcomitrella patens are steered by phy4 which has been shown to interact physically with the blue light receptor phototropin at the plasma membrane. This complex might perceive and transduce vectorial information leading to cytoskeleton reorganization and finally a directional growth response. We developed yeast two-hybrid procedures using photochemically functional, full-length phy4 as bait in Physcomitrella cDNA library screens and growth assays under different light conditions, revealing Pfr-dependent interactions possibly associated with phytochrome cytoplasmic signaling. Candidate proteins were then expressed in planta with fluorescent protein tags to determine their intracellular localization in darkness and red light. Of 14 candidates, 12 were confirmed to interact with phy4 in planta using bimolecular fluorescence complementation. We also used database information to study their expression patterns relative to those of phy4. We discuss the likely functional characteristics of these holophytochrome-interacting proteins (HIP's) and their possible roles in signaling.
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79
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Marino D, Ariz I, Lasa B, Santamaría E, Fernández-Irigoyen J, González-Murua C, Aparicio Tejo PM. Quantitative proteomics reveals the importance of nitrogen source to control glucosinolate metabolism in Arabidopsis thaliana and Brassica oleracea. JOURNAL OF EXPERIMENTAL BOTANY 2016; 67:3313-23. [PMID: 27085186 PMCID: PMC4892723 DOI: 10.1093/jxb/erw147] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Accessing different nitrogen (N) sources involves a profound adaptation of plant metabolism. In this study, a quantitative proteomic approach was used to further understand how the model plant Arabidopsis thaliana adjusts to different N sources when grown exclusively under nitrate or ammonium nutrition. Proteome data evidenced that glucosinolate metabolism was differentially regulated by the N source and that both TGG1 and TGG2 myrosinases were more abundant under ammonium nutrition, which is generally considered to be a stressful situation. Moreover, Arabidopsis plants displayed glucosinolate accumulation and induced myrosinase activity under ammonium nutrition. Interestingly, these results were also confirmed in the economically important crop broccoli (Brassica oleracea var. italica). Moreover, these metabolic changes were correlated in Arabidopsis with the differential expression of genes from the aliphatic glucosinolate metabolic pathway. This study underlines the importance of nitrogen nutrition and the potential of using ammonium as the N source in order to stimulate glucosinolate metabolism, which may have important applications not only in terms of reducing pesticide use, but also for increasing plants' nutritional value.
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Affiliation(s)
- Daniel Marino
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Apdo. 644, E-48080 Bilbao, Spain Ikerbasque, Basque Foundation for Science, E-48011 Bilbao, Spain
| | - Idoia Ariz
- Departamento de Ciencias del Medio Natural, Universidad Pública de Navarra, Pamplona, Spain Faculdade de Ciências, Centro Ecologia Evolução e Alterações Ambientais, Universidade de Lisboa, Lisboa, Portugal
| | - Berta Lasa
- Departamento de Ciencias del Medio Natural, Universidad Pública de Navarra, Pamplona, Spain
| | - Enrique Santamaría
- Proteomics Unit, Navarrabiomed, Fundación Miguel Servet, Proteored-ISCIII, Instituto de investigación Sanitaria de Navarra (IdiSNA), Pamplona, Spain
| | - Joaquín Fernández-Irigoyen
- Proteomics Unit, Navarrabiomed, Fundación Miguel Servet, Proteored-ISCIII, Instituto de investigación Sanitaria de Navarra (IdiSNA), Pamplona, Spain
| | - Carmen González-Murua
- Department of Plant Biology and Ecology, University of the Basque Country (UPV/EHU), Apdo. 644, E-48080 Bilbao, Spain
| | - Pedro M Aparicio Tejo
- Departamento de Ciencias del Medio Natural, Universidad Pública de Navarra, Pamplona, Spain
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80
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Steindal ALH, Johansen TJ, Bengtsson GB, Hagen SF, Mølmann JAB. Impact of pre-harvest light spectral properties on health- and sensory-related compounds in broccoli florets. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2016; 96:1974-1981. [PMID: 26084542 DOI: 10.1002/jsfa.7307] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/28/2015] [Revised: 06/12/2015] [Accepted: 06/13/2015] [Indexed: 06/04/2023]
Abstract
BACKGROUND Plants grown at different latitudes experience differences in light spectral composition. Broccoli (Brassica oleracea L. var italica) plants were grown in climate-controlled chambers under supplemental wavelengths (red, far-red, red + far-red or blue) from light-emitting diodes (LEDs). The light treatments were combined with two cold climate temperatures (12 and 15 °C) during broccoli head formation to investigate the effects on morphology and content of health- and sensory-related compounds: glucosinolates, flavonols, ascorbic acid and soluble sugars. RESULTS Supplemental far-red and red + far-red light led to elongated plants and the lowest total glucosinolate content in broccoli florets. The content of quercetin was highest with supplemental red light. Vitamin C was not significantly affected by the light treatments, but 12 °C gave a higher content than 15 °C. CONCLUSION The effects of supplemental red and far-red light suggest an involvement of phytochromes in the regulation of glucosinolates and flavonols. A shift in red:far-red ratio could cause changes in their content besides altering the morphology. The sugar and vitamin C content appears to be unaffected by these light conditions. Supplemental blue light had little effect on plant morphology and content of the health- and sensory related compounds.
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Affiliation(s)
| | - Tor J Johansen
- Bioforsk - Norwegian Institute for Agricultural and Environmental Research, NO-9269, Tromsø, Norway
| | - Gunnar B Bengtsson
- Bioforsk - Norwegian Institute for Agricultural and Environmental Research, NO-9269, Tromsø, Norway
| | - Sidsel F Hagen
- Nofima - Norwegian Institute of Food, Fisheries and Aquaculture Research, NO-1431, Ås, Norway
| | - Jørgen A B Mølmann
- Bioforsk - Norwegian Institute for Agricultural and Environmental Research, NO-9269, Tromsø, Norway
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81
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Multifunctionality of plastid nucleoids as revealed by proteome analyses. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2016; 1864:1016-38. [PMID: 26987276 DOI: 10.1016/j.bbapap.2016.03.009] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2015] [Revised: 02/25/2016] [Accepted: 03/09/2016] [Indexed: 01/08/2023]
Abstract
Protocols aimed at the isolation of nucleoids and transcriptionally active chromosomes (TACs) from plastids of higher plants have been established already decades ago, but only recent improvements in the mass spectrometry methods enabled detailed proteomic characterization of their components. Here we present a comprehensive analysis of the protein compositions obtained from two proteomic studies of TAC fractions isolated from Arabidopsis/mustard and spinach chloroplasts, respectively, as well as nucleoid fractions from Arabidopsis, maize and pea. Interestingly, different approaches as well as the use of diverse starting materials resulted in the detection of varying protein catalogues with a number of shared proteins. Possible reasons for the discrepancies between the protein repertoires and for missing out some of the nucleoid proteins that have been identified previously by other means than mass spectrometry as well as the repeated identification of "unexpected" proteins indicating potential links between DNA/RNA-associated nucleoid core functions and energy metabolism as well as biosynthetic activities of plastids will be discussed. In accordance with the nucleoid association of proteins involved in key functions of plastids including photosynthesis, the phenotypes of mutants lacking one or the other plastid nucleoid-associated protein (ptNAP) show the importance of nucleoid proteins for overall plant development and growth. This article is part of a Special Issue entitled: Plant Proteomics--a bridge between fundamental processes and crop production, edited by Dr. Hans-Peter Mock.
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82
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Effects of light quality on main health-promoting compounds and antioxidant capacity of Chinese kale sprouts. Food Chem 2015; 196:1232-8. [PMID: 26593611 DOI: 10.1016/j.foodchem.2015.10.055] [Citation(s) in RCA: 81] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2015] [Revised: 09/02/2015] [Accepted: 10/12/2015] [Indexed: 01/10/2023]
Abstract
The effects of different light qualities, including white, red and blue lights, on main health-promoting compounds and antioxidant capacity of Chinese kale sprouts were investigated using light-emitting diodes (LEDs) as a light source. Our results showed that blue light treatment significantly decreased the content of gluconapin, the primary compound for bitter flavor in shoots, while increased the glucoraphanin content in roots. Moreover, the maximum content of vitamin C was detected in the white-light grown sprouts and the highest levels of total phenolic and anthocyanins, as well as the strongest antioxidant capacity were observed in blue-light grown sprouts. Taken together, the application of a colorful light source is a good practice for improvement of the consumers' acceptance and the nutritional phtyochemicals of Chinese kale sprouts.
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83
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Moon J, Jeong MJ, Lee SI, Lee JG, Hwang H, Yu J, Kim YR, Park SW, Kim JA. Effect of LED mixed light conditions on the glucosinolate pathway in brassica rapa. ACTA ACUST UNITED AC 2015. [DOI: 10.5010/jpb.2015.42.3.245] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Affiliation(s)
- Junghyun Moon
- Functional Biomaterial Division, National Academy of Agricultural Science, Rural Development Administration, Suwon, 441-707, Republic of Korea
| | - Mi Jeong Jeong
- Functional Biomaterial Division, National Academy of Agricultural Science, Rural Development Administration, Suwon, 441-707, Republic of Korea
| | - Soo In Lee
- Functional Biomaterial Division, National Academy of Agricultural Science, Rural Development Administration, Suwon, 441-707, Republic of Korea
| | - Jun Gu Lee
- Department of Horticulture, Chonbuk National University, Jeonju 561-756, Korea
| | - Hyunseung Hwang
- Department of Plant Science, College of Agriculture and Life Sciences, Seoul National University, San 56-1, Sillim-dong, Gwanak-gu, Seoul, 151-744 Korea
| | - Jaewoong Yu
- Department of Molecular Biotechnology, Konkuk University, Seoul 143-701, Korea
| | - Yong-Rok Kim
- Department of Chemistry, Yonsei University, Shinchon-Dong 134, Seodaemun-Gu, Seoul 120 749, Republic of Korea
| | - Se Won Park
- Department of Molecular Biotechnology, Konkuk University, Seoul 143-701, Korea
| | - Jin A Kim
- Functional Biomaterial Division, National Academy of Agricultural Science, Rural Development Administration, Suwon, 441-707, Republic of Korea
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84
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Burow M, Atwell S, Francisco M, Kerwin RE, Halkier BA, Kliebenstein DJ. The Glucosinolate Biosynthetic Gene AOP2 Mediates Feed-back Regulation of Jasmonic Acid Signaling in Arabidopsis. MOLECULAR PLANT 2015; 8:1201-12. [PMID: 25758208 DOI: 10.1016/j.molp.2015.03.001] [Citation(s) in RCA: 45] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2014] [Revised: 03/01/2015] [Accepted: 03/02/2015] [Indexed: 05/02/2023]
Abstract
Survival in changing and challenging environments requires an organism to efficiently obtain and use its resources. Due to their sessile nature, it is particularly critical for plants to dynamically optimize their metabolism. In plant primary metabolism, metabolic fine-tuning involves feed-back mechanisms whereby the output of a pathway controls its input to generate a precise and robust response to environmental changes. By contrast, few studies have addressed the potential for feed-back regulation of secondary metabolism. In Arabidopsis, accumulation of the defense compounds glucosinolates has previously been linked to genetic variation in the glucosinolate biosynthetic gene AOP2. AOP2 expression can increase the transcript levels of two known regulators (MYB28 and MYB29) of the pathway, suggesting that AOP2 plays a role in positive feed-back regulation controlling glucosinolate biosynthesis. We generated mutants affecting AOP2, MYB28/29, or both. Transcriptome analysis of these mutants identified a so far unrecognized link between AOP2 and jasmonic acid (JA) signaling independent of MYB28 and MYB29. Thus, AOP2 is part of a regulatory feed-back loop linking glucosinolate biosynthesis and JA signaling and thereby allows the glucosinolate pathway to influence JA sensitivity. The discovery of this regulatory feed-back loop provides insight into how plants optimize the use of resources for defensive metabolites.
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Affiliation(s)
- Meike Burow
- DynaMo Center of Excellence, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark; Copenhagen Plant Science Centre, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark.
| | - Susanna Atwell
- Department of Plant Sciences, University of California at Davis, Davis, CA 95616, USA
| | - Marta Francisco
- Department of Plant Sciences, University of California at Davis, Davis, CA 95616, USA; Misión Biológica de Galicia, (MBG-CSIC), PO Box 28, 36080 Pontevedra, Spain
| | - Rachel E Kerwin
- Department of Plant Sciences, University of California at Davis, Davis, CA 95616, USA
| | - Barbara A Halkier
- DynaMo Center of Excellence, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark; Copenhagen Plant Science Centre, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark
| | - Daniel J Kliebenstein
- DynaMo Center of Excellence, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark; Department of Plant Sciences, University of California at Davis, Davis, CA 95616, USA
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85
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Effects of temperature and photoperiod on sensory quality and contents of glucosinolates, flavonols and vitamin C in broccoli florets. Food Chem 2015; 172:47-55. [DOI: 10.1016/j.foodchem.2014.09.015] [Citation(s) in RCA: 50] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/10/2014] [Revised: 09/04/2014] [Accepted: 09/05/2014] [Indexed: 11/22/2022]
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86
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Weese A, Pallmann P, Papenbrock J, Riemenschneider A. Brassica napus L. cultivars show a broad variability in their morphology, physiology and metabolite levels in response to sulfur limitations and to pathogen attack. FRONTIERS IN PLANT SCIENCE 2015; 6:9. [PMID: 25699060 PMCID: PMC4313603 DOI: 10.3389/fpls.2015.00009] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Accepted: 01/06/2015] [Indexed: 05/26/2023]
Abstract
Under adequate sulfur supply, plants accumulate sulfate in the vacuoles and use sulfur-containing metabolites as storage compounds. Under sulfur-limiting conditions, these pools of stored sulfur-compounds are depleted in order to balance the nitrogen to sulfur ratio for protein synthesis. Stress conditions like sulfur limitation and/or pathogen attack induce changes in the sulfate pool and the levels of sulfur-containing metabolites, which often depend on the ecotypes or cultivars. We are interested in investigating the influence of the genetic background of canola (Brassica napus) cultivars in sulfur-limiting conditions on the resistance against Verticillium longisporum. Therefore, four commercially available B. napus cultivars were analyzed. These high-performing cultivars differ in some characteristics described in their cultivar pass, such as several agronomic traits, differences in the size of the root system, and resistance to certain pathogens, such as Phoma and Verticillium. The objectives of the study were to examine and explore the patterns of morphological, physiological and metabolic diversity in these B. napus cultivars at different sulfur concentrations and in the context of plant defense. Results indicate that the root systems are influenced differently by sulfur deficiency in the cultivars. Total root dry mass and length of root hairs differ not only among the cultivars but also vary in their reaction to sulfur limitation and pathogen attack. As a sensitive indicator of stress, several parameters of photosynthetic activity determined by PAM imaging showed a broad variability among the treatments. These results were supported by thermographic analysis. Levels of sulfur-containing metabolites also showed large variations. The data were interrelated to predict the specific behavior during sulfur limitation and/or pathogen attack. Advice for farming are discussed.
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Affiliation(s)
| | - Philip Pallmann
- Institute of Biostatistics, Leibniz University HannoverHannover, Germany
| | - Jutta Papenbrock
- Institute of Botany, Leibniz University HannoverHannover, Germany
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87
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Anjum NA, Gill R, Kaushik M, Hasanuzzaman M, Pereira E, Ahmad I, Tuteja N, Gill SS. ATP-sulfurylase, sulfur-compounds, and plant stress tolerance. FRONTIERS IN PLANT SCIENCE 2015; 6:210. [PMID: 25904923 PMCID: PMC4387935 DOI: 10.3389/fpls.2015.00210] [Citation(s) in RCA: 81] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2014] [Accepted: 03/16/2015] [Indexed: 05/18/2023]
Abstract
Sulfur (S) stands fourth in the list of major plant nutrients after N, P, and K. Sulfate (SO4 (2-)), a form of soil-S taken up by plant roots is metabolically inert. As the first committed step of S-assimilation, ATP-sulfurylase (ATP-S) catalyzes SO4 (2-)-activation and yields activated high-energy compound adenosine-5(')-phosphosulfate that is reduced to sulfide (S(2-)) and incorporated into cysteine (Cys). In turn, Cys acts as a precursor or donor of reduced S for a range of S-compounds such as methionine (Met), glutathione (GSH), homo-GSH (h-GSH), and phytochelatins (PCs). Among S-compounds, GSH, h-GSH, and PCs are known for their involvement in plant tolerance to varied abiotic stresses, Cys is a major component of GSH, h-GSH, and PCs; whereas, several key stress-metabolites such as ethylene, are controlled by Met through its first metabolite S-adenosylmethionine. With the major aim of briefly highlighting S-compound-mediated role of ATP-S in plant stress tolerance, this paper: (a) overviews ATP-S structure/chemistry and occurrence, (b) appraises recent literature available on ATP-S roles and regulations, and underlying mechanisms in plant abiotic and biotic stress tolerance, (c) summarizes ATP-S-intrinsic regulation by major S-compounds, and (d) highlights major open-questions in the present context. Future research in the current direction can be devised based on the discussion outcomes.
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Affiliation(s)
- Naser A. Anjum
- Centre for Environmental and Marine Studies & Department of Chemistry, University of Aveiro, AveiroPortugal
| | - Ritu Gill
- Stress Physiology and Molecular Biology Lab, Centre for Biotechnology, Maharshi Dayanand University, RohtakIndia
| | - Manjeri Kaushik
- Stress Physiology and Molecular Biology Lab, Centre for Biotechnology, Maharshi Dayanand University, RohtakIndia
| | - Mirza Hasanuzzaman
- Department of Agronomy, Faculty of Agriculture, Sher-e-Bangla Agricultural University, DhakaBangladesh
| | - Eduarda Pereira
- Centre for Environmental and Marine Studies & Department of Chemistry, University of Aveiro, AveiroPortugal
| | - Iqbal Ahmad
- Centre for Environmental and Marine Studies & Department of Chemistry, University of Aveiro, AveiroPortugal
- Centre for Environmental and Marine Studies & Department of Biology, University of Aveiro, AveiroPortugal
| | - Narendra Tuteja
- Plant Molecular Biology Group, International Centre for Genetic Engineering and Biotechnology, New DelhiIndia
| | - Sarvajeet S. Gill
- Stress Physiology and Molecular Biology Lab, Centre for Biotechnology, Maharshi Dayanand University, RohtakIndia
- *Correspondence: Sarvajeet S. Gill, Stress Physiology and Molecular Biology Lab, Centre for Biotechnology, Maharshi Dayanand University, Rohtak 124 001, India
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88
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Calderwood A, Morris RJ, Kopriva S. Predictive sulfur metabolism - a field in flux. FRONTIERS IN PLANT SCIENCE 2014; 5:646. [PMID: 25477892 PMCID: PMC4235266 DOI: 10.3389/fpls.2014.00646] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2014] [Accepted: 11/02/2014] [Indexed: 05/08/2023]
Abstract
The key role of sulfur metabolites in response to biotic and abiotic stress in plants, as well as their importance in diet and health has led to a significant interest and effort in trying to understand and manipulate the production of relevant compounds. Metabolic engineering utilizes a set of theoretical tools to help rationally design modifications that enhance the production of a desired metabolite. Such approaches have proven their value in bacterial systems, however, the paucity of success stories to date in plants, suggests that challenges remain. Here, we review the most commonly used methods for understanding metabolic flux, focusing on the sulfur assimilatory pathway. We highlight known issues with both experimental and theoretical approaches, as well as presenting recent methods for integrating different modeling strategies, and progress toward an understanding of flux at the whole plant level.
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Affiliation(s)
| | - Richard J. Morris
- Department of Computational and Systems Biology, John Innes CentreNorwich, UK
| | - Stanislav Kopriva
- Botanical Institute and Cluster of Excellence on Plant Sciences, University of Cologne, Cologne BiocenterCologne, Germany
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89
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Rennenberg H, Herschbach C. A detailed view on sulphur metabolism at the cellular and whole-plant level illustrates challenges in metabolite flux analyses. JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:5711-24. [PMID: 25124317 DOI: 10.1093/jxb/eru315] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
Understanding the dynamics of physiological process in the systems biology era requires approaches at the genome, transcriptome, proteome, and metabolome levels. In this context, metabolite flux experiments have been used in mapping metabolite pathways and analysing metabolic control. In the present review, sulphur metabolism was taken to illustrate current challenges of metabolic flux analyses. At the cellular level, restrictions in metabolite flux analyses originate from incomplete knowledge of the compartmentation network of metabolic pathways. Transport of metabolites through membranes is usually not considered in flux experiments but may be involved in controlling the whole pathway. Hence, steady-state and snapshot readings need to be expanded to time-course studies in combination with compartment-specific metabolite analyses. Because of species-specific differences, differences between tissues, and stress-related responses, the quantitative significance of different sulphur sinks has to be elucidated; this requires the development of methods for whole-sulphur metabolome approaches. Different cell types can contribute to metabolite fluxes to different extents at the tissue and organ level. Cell type-specific analyses are needed to characterize these contributions. Based on such approaches, metabolite flux analyses can be expanded to the whole-plant level by considering long-distance transport and, thus, the interaction of roots and the shoot in metabolite fluxes. However, whole-plant studies need detailed empirical and mathematical modelling that have to be validated by experimental analyses.
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Affiliation(s)
- Heinz Rennenberg
- Institute of Forest Sciences, Chair of Tree Physiology, University of Freiburg, Georges-Koehler-Allee 53, 79110 Freiburg, Germany Centre for Biosystems Analysis (ZBSA), University of Freiburg, Habsburgerstrasse 49, 79104 Freiburg, Germany
| | - Cornelia Herschbach
- Institute of Forest Sciences, Chair of Tree Physiology, University of Freiburg, Georges-Koehler-Allee 53, 79110 Freiburg, Germany
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90
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Steindal ALH, Rødven R, Hansen E, Mølmann J. Effects of photoperiod, growth temperature and cold acclimatisation on glucosinolates, sugars and fatty acids in kale. Food Chem 2014; 174:44-51. [PMID: 25529650 DOI: 10.1016/j.foodchem.2014.10.129] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2014] [Revised: 09/22/2014] [Accepted: 10/23/2014] [Indexed: 10/24/2022]
Abstract
Curly kale is a robust, cold tolerant plant with a high content of health-promoting compounds, grown at a range of latitudes. To assess the effects of temperature, photoperiod and cold acclimatisation on levels of glucosinolates, fatty acids and soluble sugars in kale, an experiment was set up under controlled conditions. Treatments consisted of combinations of the temperatures 15/9 or 21/15 °C, and photoperiods of 12 or 24h, followed by a cold acclimatisation period. Levels of glucosinolates and fatty acid types in leaves were affected by growth conditions and cold acclimatisation, being generally highest before acclimatisation. The effects of growth temperature and photoperiod on freezing tolerance were most pronounced in plants grown without cold acclimatisation. The results indicate that cold acclimatisation can increase the content of soluble sugar and can thereby improve the taste, whilst the content of unsaturated fatty and glucosinolates acids may decrease.
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Affiliation(s)
- Anne Linn Hykkerud Steindal
- Norwegian Institute for Agricultural and Environmental Research, Bioforsk Nord Holt, Box 2284, NO-9269 Tromsø, Norway.
| | - Rolf Rødven
- Norwegian Institute for Agricultural and Environmental Research, Bioforsk Nord Holt, Box 2284, NO-9269 Tromsø, Norway
| | - Espen Hansen
- Marbio, UiT The Arctic University of Norway, NO-9037 Tromsø, Norway
| | - Jørgen Mølmann
- Norwegian Institute for Agricultural and Environmental Research, Bioforsk Nord Holt, Box 2284, NO-9269 Tromsø, Norway
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91
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Hirschmann F, Krause F, Papenbrock J. The multi-protein family of sulfotransferases in plants: composition, occurrence, substrate specificity, and functions. FRONTIERS IN PLANT SCIENCE 2014; 5:556. [PMID: 25360143 PMCID: PMC4199319 DOI: 10.3389/fpls.2014.00556] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2014] [Accepted: 09/28/2014] [Indexed: 05/20/2023]
Abstract
All members of the sulfotransferase (SOT, EC 2.8.2.-) protein family transfer a sulfuryl group from the donor 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to an appropriate hydroxyl group of several classes of substrates. The primary structure of these enzymes is characterized by a histidine residue in the active site, defined PAPS binding sites and a longer SOT domain. Proteins with this SOT domain occur in all organisms from all three domains, usually as a multi-protein family. Arabidopsis thaliana SOTs, the best characterized SOT multi-protein family, contains 21 members. The substrates for several plant enzymes have already been identified, such as glucosinolates, brassinosteroids, jasmonates, flavonoids, and salicylic acid. Much information has been gathered on desulfo-glucosinolate (dsGl) SOTs in A. thaliana. The three cytosolic dsGl SOTs show slightly different expression patterns. The recombinant proteins reveal differences in their affinity to indolic and aliphatic dsGls. Also the respective recombinant dsGl SOTs from different A. thaliana ecotypes differ in their kinetic properties. However, determinants of substrate specificity and the exact reaction mechanism still need to be clarified. Probably, the three-dimensional structures of more plant proteins need to be solved to analyze the mode of action and the responsible amino acids for substrate binding. In addition to A. thaliana, more plant species from several families need to be investigated to fully elucidate the diversity of sulfated molecules and the way of biosynthesis catalyzed by SOT enzymes.
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Affiliation(s)
| | | | - Jutta Papenbrock
- Institute of Botany, Leibniz University HannoverHannover, Germany
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92
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Kim YB, Chun JH, Kim HR, Kim SJ, Lim YP, Park SU. Variation of Glucosinolate Accumulation and Gene Expression of Transcription Factors at Different Stages of Chinese Cabbage Seedlings under Light and Dark Conditions. Nat Prod Commun 2014. [DOI: 10.1177/1934578x1400900428] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Chinese cabbage is one of the most important leafy vegetables widely used in East Asian cuisines. The glucosinolate (GSL) accumulation and transcript levels of 7 transcription factors (Dofl.l, IQD1-1, MYB28, MYB29, MYB34, MYB51, and MYB122, and their isoforms) involved in the biosynthesis of aliphatic and indolic glucosinolates (GSLs) were analyzed at different stages of Chinese cabbage (Brassica rapa ssp. pekinensis) seedlings under light and dark conditions using high performance liquid chromatography and quantitative real time PCR. During seedling development, transcription of almost all transcription factors under light conditions was higher expressed than under dark conditions. Five aliphatic GSLs (progoitrin, sinigrin, glucoalyssin, gluconapin, and glucobrassicanapin) and four indolic GSLs (4-hydroxyglucobrassicin, glucobrassicin, 4-methoxyglucobrassicin, and neoglucobrasscin) were detected. Total GSL contents under light conditions 6, 8, and 10 days after sowing (DAS) were 3.2-, 3.9-, and 6.9-fold higher, respectively than those of dark conditions. Interestingly, total GSL contents 2 {85.4 μmol/g dry weight (DW)} to 10 (7.74 μmol/g DW) DAS under dark conditions were gradually decreased. In this study, our results suggest that light affects the levels of GSL in Chinese cabbage seedlings. These results could be useful for obtaining cabbage varieties rich in GSLs.
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Affiliation(s)
- Yeon Bok Kim
- Department of Crop Science, Chungnam National University, 99 Daehak-Ro, Yuseong-Gu, Daejeon, 305-754, Korea
| | - Jin-Hyuk Chun
- Department of Bio-Environmental Chemistry, Chungnam National University, 99 Daehak-Ro, Yuseong-Gu, Daejeon 305-764, Korea
| | - Hye Ran Kim
- Green Bio Research Center, Cabbage Genomics Assisted Breeding Supporting Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 305-806, Korea
| | - Sun-Ju Kim
- Department of Bio-Environmental Chemistry, Chungnam National University, 99 Daehak-Ro, Yuseong-Gu, Daejeon 305-764, Korea
| | - Yong Pyo Lim
- Department of Horticultural Science, Chungnam National University, 99 Daehak-Ro, Yuseong-Gu, Daejeon, 305-754, Korea
| | - Sang Un Park
- Department of Crop Science, Chungnam National University, 99 Daehak-Ro, Yuseong-Gu, Daejeon, 305-754, Korea
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93
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Trotta A, Rahikainen M, Konert G, Finazzi G, Kangasjärvi S. Signalling crosstalk in light stress and immune reactions in plants. Philos Trans R Soc Lond B Biol Sci 2014; 369:20130235. [PMID: 24591720 DOI: 10.1098/rstb.2013.0235] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
The evolutionary history of plants is tightly connected with the evolution of microbial pathogens and herbivores, which use photosynthetic end products as a source of life. In these interactions, plants, as the stationary party, have evolved sophisticated mechanisms to sense, signal and respond to the presence of external stress agents. Chloroplasts are metabolically versatile organelles that carry out fundamental functions in determining appropriate immune reactions in plants. Besides photosynthesis, chloroplasts host key steps in the biosynthesis of amino acids, stress hormones and secondary metabolites, which have a great impact on resistance against pathogens and insect herbivores. Changes in chloroplast redox signalling pathways and reactive oxygen species metabolism also mediate local and systemic signals, which modulate plant resistance to light stress and disease. Moreover, interplay among chloroplastic signalling networks and plasma membrane receptor kinases is emerging as a key mechanism that modulates stress responses in plants. This review highlights the central role of chloroplasts in the signalling crosstalk that essentially determines the outcome of plant-pathogen interactions in plants.
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Affiliation(s)
- Andrea Trotta
- Molecular Plant Biology, University of Turku, , Turku 20014, Finland
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94
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Falk KL, Kästner J, Bodenhausen N, Schramm K, Paetz C, Vassão DG, Reichelt M, von Knorre D, Bergelson J, Erb M, Gershenzon J, Meldau S. The role of glucosinolates and the jasmonic acid pathway in resistance of Arabidopsis thaliana against molluscan herbivores. Mol Ecol 2014; 23:1188-1203. [PMID: 24313595 DOI: 10.1111/mec.12610] [Citation(s) in RCA: 52] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2013] [Revised: 10/07/2013] [Accepted: 10/11/2013] [Indexed: 11/27/2022]
Abstract
Although slugs and snails play important roles in terrestrial ecosystems and cause considerable damage on a variety of crop plants, knowledge about the mechanisms of plant immunity to molluscs is limited. We found slugs to be natural herbivores of Arabidopsis thaliana and therefore investigated possible resistance mechanisms of this species against several molluscan herbivores. Treating wounded leaves with the mucus residue ('slime trail') of the Spanish slug Arion lusitanicus increased wound-induced jasmonate levels, suggesting the presence of defence elicitors in the mucus. Plants deficient in jasmonate biosynthesis and signalling suffered more damage by molluscan herbivores in the laboratory and in the field, demonstrating that JA-mediated defences protect A. thaliana against slugs and snails. Furthermore, experiments using A. thaliana mutants with altered levels of specific glucosinolate classes revealed the importance of aliphatic glucosinolates in defending leaves and reproductive structures against molluscs. The presence in mollusc faeces of known and novel metabolites arising from glutathione conjugation with glucosinolate hydrolysis products suggests that molluscan herbivores actively detoxify glucosinolates. Higher levels of aliphatic glucosinolates were found in plants during the night compared to the day, which correlated well with the nocturnal activity rhythms of slugs and snails. Our data highlight the function of well-known antiherbivore defence pathways in resistance against slugs and snails and suggest an important role for the diurnal regulation of defence metabolites against nocturnal molluscan herbivores.
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Affiliation(s)
- Kimberly L Falk
- Department of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Julia Kästner
- Biodiversity project group, Department of Molecular Ecology, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Natacha Bodenhausen
- Department of Ecology and Evolution, University of Chicago, 1101 East 57 Street, Chicago, Illinois, 60637, USA
| | - Katharina Schramm
- Department of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Christian Paetz
- Research Group Biosynthesis/NMR, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Daniel Giddings Vassão
- Department of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Michael Reichelt
- Department of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Dietrich von Knorre
- Phyletisches Museum, Friedrich-Schiller-Universität Jena, Vor dem Neutor 1, 07743 Jena
| | - Joy Bergelson
- Root-Herbivore Interactions Group, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Matthias Erb
- Research Group Biosynthesis/NMR, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Jonathan Gershenzon
- Department of Biochemistry, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
| | - Stefan Meldau
- Biodiversity project group, Department of Molecular Ecology, Max-Planck-Institute for Chemical Ecology, Hans-Knöll-Str.8, 07745 Jena, Germany
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95
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Frerigmann H, Gigolashvili T. Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency. FRONTIERS IN PLANT SCIENCE 2014; 5:626. [PMID: 25426131 PMCID: PMC4224069 DOI: 10.3389/fpls.2014.00626] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/22/2014] [Accepted: 10/22/2014] [Indexed: 05/19/2023]
Abstract
To balance the flux of sulfur (S) into glucosinolates (GSL) and primary metabolites plants exploit various regulatory mechanisms particularly important upon S deficiency (-S). The role of MYB34, MYB51 and MYB122 controlling the production of indolic glucosinolates (IGs) and MYB28, MYB29, and MYB76 regulating the biosynthesis of aliphatic glucosinolates (AGs) in Arabidopsis thaliana has not been fully addressed at -S conditions yet. We show that the decline in the concentrations of GSL during S depletion does not coincide with the globally decreased transcription of R2R3-MYBs. Whereas the levels of GSL are diminished, the expression of MYB34, MYB51, MYB122, and MYB28 is hardly changed in early phase of S limitation. Furthermore, the mRNA levels of these MYBs start to raise under prolonged S starvation. In parallel, we found that SLIM1 can downregulate the MYBs in vitro as demonstrated in trans-activation assays in cultured Arabidopsis cells with SLIM1 as effector and ProMYB51:uidA as a reporter construct. However, in vivo, only the mRNA of MYB29 and MYB76 correlated with the levels of GSL at -S. We propose that the negative effect of SLIM1 on GSL regulatory genes can be overridden by a "low GSL signal" inducing the transcription of MYBs in a feedback regulatory loop. In accordance with this hypothesis, the expression of MYB34, MYB51, MYB122, and CYP83B1 was further induced in cyp79b2 cyp79b3 mutant exposed to -S conditions vs. cyp79b2 cyp79b3 plants grown on control medium. In addition, the possible role of MYBs in the regulation of essential S assimilation enzymes, in the regulation of GSL biosynthesis upon accelerated termination of life cycles, in the mobilization of auxin and lateral root formation at S deficiency is discussed.
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Affiliation(s)
| | - Tamara Gigolashvili
- *Correspondence: Tamara Gigolashvili, Biozentrum Köln, Botanisches Institut, Universität zu Köln, Zülpicher Str. 47 B, 50674 Köln, Germany e-mail:
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96
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Steindal ALH, Mølmann J, Bengtsson GB, Johansen TJ. Influence of day length and temperature on the content of health-related compounds in broccoli (Brassica oleracea L. var. italica). JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2013; 61:10779-86. [PMID: 24168154 DOI: 10.1021/jf403466r] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
Vegetables grown at different latitudes are exposed to various temperatures and day lengths, which can affect the content of health- and sensory-related compounds in broccoli florets. A 2 × 2 factorial experiment was conducted under controlled growth conditions, with contrasting temperatures (15/9 and 21/15 °C) and day lengths (12 and 24 h), to investigate the effect on glucosinolates, vitamin C, flavonols, and soluble sugars. Aliphatic glucosinolates, quercetin, and kaempferol were at their highest levels at high temperatures combined with a 12 h day. Levels of total glucosinolates, d-glucose, and d-fructose were elevated by high temperatures. Conversely, the content of vitamin C was highest with a 12 h day length combined with 15/9 °C. Our results indicate that temperature and day length influence the contents of health-related compounds in broccoli florets in a complex way, suggesting no general superiority of any of the contrasting growth conditions.
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Affiliation(s)
- Anne Linn Hykkerud Steindal
- Norwegian Institute for Agricultural and Environmental Research , Bioforsk Nord Holt, P.O. Box 2284, N-9269 Tromsø, Norway
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97
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del Carmen Martínez-Ballesta M, Moreno DA, Carvajal M. The physiological importance of glucosinolates on plant response to abiotic stress in Brassica. Int J Mol Sci 2013; 14:11607-25. [PMID: 23722664 PMCID: PMC3709749 DOI: 10.3390/ijms140611607] [Citation(s) in RCA: 161] [Impact Index Per Article: 14.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2013] [Revised: 05/14/2013] [Accepted: 05/20/2013] [Indexed: 11/30/2022] Open
Abstract
Glucosinolates, a class of secondary metabolites, mainly found in Brassicaceae, are affected by the changing environment. This review is focusing on the physiological significance of glucosinolates and their hydrolysis products in the plant response to different abiotic stresses. Special attention is paid to the crosstalk between some of the physiological processes involved in stress response and glucosinolate metabolism, with the resulting connection between both pathways in which signaling mechanisms glucosinolate may act as signals themselves. The function of glucosinolates, further than in defense switching, is discussed in terms of alleviating pathogen attack under abiotic stress. The fact that the exogenous addition of glucosinolate hydrolysis products may alleviate certain stress conditions through its effect on specific proteins is described in light of the recent reports, but the molecular mechanisms involved in this response merit further research. Finally, the transient allocation and re-distribution of glucosinolates as a response to environmental changes is summarized.
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Affiliation(s)
- María del Carmen Martínez-Ballesta
- Plant Nutrition Department, Centre of Edaphology and Applied Biology of Segura (CEBAS-CSIC), Campus of Espinardo, Building 25, Murcia E-30100, Spain; E-Mail:
| | - Diego A. Moreno
- Phytochemistry Lab, Food Science and Technology Department, Centre of Edaphology and Applied Biology of Segura (CEBAS-CSIC), Campus of Espinardo, Building 25, Murcia E-30100, Spain; E-Mail:
| | - Micaela Carvajal
- Plant Nutrition Department, Centre of Edaphology and Applied Biology of Segura (CEBAS-CSIC), Campus of Espinardo, Building 25, Murcia E-30100, Spain; E-Mail:
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