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Adem GD, Chen G, Shabala L, Chen ZH, Shabala S. GORK Channel: A Master Switch of Plant Metabolism? TRENDS IN PLANT SCIENCE 2020; 25:434-445. [PMID: 31964604 DOI: 10.1016/j.tplants.2019.12.012] [Citation(s) in RCA: 59] [Impact Index Per Article: 14.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Revised: 11/23/2019] [Accepted: 12/10/2019] [Indexed: 05/18/2023]
Abstract
Potassium regulates a plethora of metabolic and developmental response in plants, and upon exposure to biotic and abiotic stresses a substantial K+ loss occurs from plant cells. The outward-rectifying potassium efflux GORK channels are central to this stress-induced K+ loss from the cytosol. In the mammalian systems, signaling molecules such as gamma-aminobutyric acid, G-proteins, ATP, inositol, and protein phosphatases were shown to operate as ligands controlling many K+ efflux channels. Here we present the evidence that the same molecules may also regulate GORK channels in plants. This mechanism enables operation of the GORK channels as a master switch of the cell metabolism, thus adjusting intracellular K+ homeostasis to altered environmental conditions, to maximize plant adaptive potential.
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Affiliation(s)
- Getnet D Adem
- Tasmanian Institute for Agriculture, University of Tasmania, Hobart, TAS 7001, Australia
| | - Guang Chen
- Collaborative Innovation Centre for Grain Industry, College of Agriculture, Yangtze University, Jingzhou 434025, China; College of Agriculture and Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Lana Shabala
- Tasmanian Institute for Agriculture, University of Tasmania, Hobart, TAS 7001, Australia
| | - Zhong-Hua Chen
- School of Science and Health, Western Sydney University, Penrith, NSW 2751, Australia; Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW 2751, Australia.
| | - Sergey Shabala
- Tasmanian Institute for Agriculture, University of Tasmania, Hobart, TAS 7001, Australia; International Research Centre for Environmental Membrane Biology, Foshan University, Foshan 528000, China.
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Sun Y, Gao M, Kang S, Yang C, Meng H, Yang Y, Zhao X, Gao Z, Xu Y, Jin Y, Zhao X, Zhang Z, Han J. Molecular Mechanism Underlying Mechanical Wounding-Induced Flavonoid Accumulation in Dalbergia odorifera T. Chen, an Endangered Tree That Produces Chinese Rosewood. Genes (Basel) 2020; 11:genes11050478. [PMID: 32353985 PMCID: PMC7291145 DOI: 10.3390/genes11050478] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Revised: 04/13/2020] [Accepted: 04/24/2020] [Indexed: 01/27/2023] Open
Abstract
Dalbergia odorifera, a critically endangered tree species, produces heartwood containing a vast variety of flavonoids. This heartwood, also known as Chinese rosewood, has high economic and medicinal value, but its formation takes several decades. In this study, we showed that discolored wood induced by pruning displays similar color, structure, and flavonoids content to those of natural heartwood, suggesting that wounding is an efficient method for inducing flavonoid production in D. odorifera. Transcriptome analysis was performed to investigate the mechanism underlying wounding-induced flavonoids production in D. odorifera heartwood. Wounding upregulated the expression of 90 unigenes, which covered 19 gene families of the phenylpropanoid and flavonoid pathways, including PAL, C4H, 4CL, CHS, CHI, 6DCS, F3’5’H, F3H, FMO, GT, PMAT, CHOMT, IFS, HI4’OMT, HID, IOMT, I2’H, IFR, and I3’H. Furthermore, 47 upregulated unigenes were mapped to the biosynthesis pathways for five signal molecules (ET, JA, ABA, ROS, and SA). Exogenous application of these signal molecules resulted in the accumulation of flavonoids in cell suspensions of D. odorifera, supporting their role in wounding-induced flavonoid production. Insights from this study will help develop new methods for rapidly inducing the formation of heartwood with enhanced medicinal value.
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Affiliation(s)
- Ying Sun
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
| | - Mei Gao
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
| | - Seogchan Kang
- Department of Plant Pathology and Environmental Microbiology, The Pennsylvania State University, University Park, PA 16802, USA;
| | - Chengmin Yang
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
| | - Hui Meng
- Hainan Branch Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Haikou 570311, China; (H.M.); (Y.Y.); (X.Z.)
| | - Yun Yang
- Hainan Branch Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Haikou 570311, China; (H.M.); (Y.Y.); (X.Z.)
| | - Xiangsheng Zhao
- Hainan Branch Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Haikou 570311, China; (H.M.); (Y.Y.); (X.Z.)
| | - Zhihui Gao
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
| | - Yanhong Xu
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
| | - Yue Jin
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
| | - Xiaohong Zhao
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
| | - Zheng Zhang
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
- Hainan Branch Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Haikou 570311, China; (H.M.); (Y.Y.); (X.Z.)
- Correspondence: (Z.Z.); (J.H.); Tel.: +86-10-57833363 (Z.Z.); +86-10-57833198 (J.H.)
| | - Jianping Han
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Chinese Peking Union Medical College, Beijing 100193, China; (Y.S.); (M.G.); (C.Y.); (Z.G.); (Y.X.); (Y.J.); (X.Z.)
- Correspondence: (Z.Z.); (J.H.); Tel.: +86-10-57833363 (Z.Z.); +86-10-57833198 (J.H.)
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Zhu R, Dong X, Xue Y, Xu J, Zhang A, Feng M, Zhao Q, Xia S, Yin Y, He S, Li Y, Liu T, Kang E, Shang Z. Redox-Responsive Transcription Factor 1 (RRFT1) Is Involved in Extracellular ATP-Regulated Arabidopsis thaliana Seedling Growth. PLANT & CELL PHYSIOLOGY 2020; 61:685-698. [PMID: 32049334 DOI: 10.1093/pcp/pcaa014] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2019] [Accepted: 01/31/2020] [Indexed: 05/21/2023]
Abstract
Extracellular adenosine triphosphate (eATP) is an apoplastic signaling molecule that plays an essential role in the growth and development of plants. Arabidopsis seedlings have been reported to respond to eATP; however, the downstream signaling components are still not well understood. In this study, we report that an ethylene-responsive factor, Redox-Responsive Transcription Factor 1 (RRTF1), is involved in eATP-regulated Arabidopsis thaliana seedling growth. Exogenous adenosine triphosphate inhibited green seedling root growth and induced hypocotyl bending of etiolated seedlings. RRTF1 loss-of-function mutant (rrtf1) seedlings showed decreased responses to eATP, while its complementation or overexpression led to recovered or increased eATP responsiveness. RRTF1 was expressed rapidly after eATP stimulation and then migrated into the nuclei of root tip cells. eATP-induced auxin accumulation in root tip or hypocotyl cells was impaired in rrtf1. Chromatin immunoprecipitation and high-throughput sequencing results indicated that eATP induced some genes related to cell growth and development in wild type but not in rrtf1 cells. These results suggest that RRTF1 may be involved in eATP signaling by regulating functional gene expression and cell metabolism in Arabidopsis seedlings.
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Affiliation(s)
- Ruojia Zhu
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
- College of Pharmacy, Hebei University of Chinese Medicine, Shijiazhuang 050200, Hebei, China
| | - Xiaoxia Dong
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
- Department of Chemistry Engineering and Biological Technology, Xingtai University, Xingtai 054001, Hebei, China
| | - Yingying Xue
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Jiawei Xu
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Aiqi Zhang
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Meng Feng
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Qing Zhao
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Shuyan Xia
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Yahong Yin
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Shihua He
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Yuke Li
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Ting Liu
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Erfang Kang
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
| | - Zhonglin Shang
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang 050024, Hebei, China
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Li Q, Wang C, Mou Z. Perception of Damaged Self in Plants. PLANT PHYSIOLOGY 2020; 182:1545-1565. [PMID: 31907298 PMCID: PMC7140957 DOI: 10.1104/pp.19.01242] [Citation(s) in RCA: 38] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2019] [Accepted: 12/16/2019] [Indexed: 05/04/2023]
Abstract
Plants use specific receptor proteins on the cell surface to detect host-derived danger signals released in response to attacks by pathogens or herbivores and activate immune responses against them.
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Affiliation(s)
- Qi Li
- Department of Microbiology and Cell Science, University of Florida, Gainesville, Florida 32611
| | - Chenggang Wang
- Department of Microbiology and Cell Science, University of Florida, Gainesville, Florida 32611
| | - Zhonglin Mou
- Department of Microbiology and Cell Science, University of Florida, Gainesville, Florida 32611
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55
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Hu CH, Wang PQ, Zhang PP, Nie XM, Li BB, Tai L, Liu WT, Li WQ, Chen KM. NADPH Oxidases: The Vital Performers and Center Hubs during Plant Growth and Signaling. Cells 2020; 9:E437. [PMID: 32069961 PMCID: PMC7072856 DOI: 10.3390/cells9020437] [Citation(s) in RCA: 55] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2020] [Revised: 02/08/2020] [Accepted: 02/10/2020] [Indexed: 12/14/2022] Open
Abstract
NADPH oxidases (NOXs), mostly known as respiratory burst oxidase homologs (RBOHs), are the key producers of reactive oxygen species (ROS) in plants. A lot of literature has addressed ROS signaling in plant development regulation and stress responses as well as on the enzyme's structure, evolution, function, regulation and associated mechanisms, manifesting the role of NOXs/RBOHs as the vital performers and center hubs during plant growth and signaling. This review focuses on recent advances of NOXs/RBOHs on cell growth, hormone interaction, calcium signaling, abiotic stress responses, and immunity. Several primary particles, including Ca2+, CDPKs, BIK1, ROPs/RACs, CERK, FER, ANX, SnRK and SIK1-mediated regulatory mechanisms, are fully summarized to illustrate the signaling behavior of NOXs/RBOHs and their sophisticated and dexterous crosstalks. Diverse expression and activation regulation models endow NOXs/RBOHs powerful and versatile functions in plants to maintain innate immune homeostasis and development integrity. NOXs/RBOHs and their related regulatory items are the ideal targets for crop improvement in both yield and quality during agricultural practices.
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Affiliation(s)
- Chun-Hong Hu
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, Shaanxi, China
- College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou 466000, Henan, China
| | - Peng-Qi Wang
- School of Life Sciences, Tsinghua University, Beijing 100084, China
| | - Peng-Peng Zhang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Xiu-Min Nie
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Bin-Bin Li
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Li Tai
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Wen-Ting Liu
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Wen-Qiang Li
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, Shaanxi, China
| | - Kun-Ming Chen
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling 712100, Shaanxi, China
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Extracellular ATP affects cell viability, respiratory O2 uptake, and intracellular ATP production of tobacco cell suspension culture in response to hydrogen peroxide-induced oxidative stress. Biologia (Bratisl) 2020. [DOI: 10.2478/s11756-020-00442-w] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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57
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Pietrowska-Borek M, Dobrogojski J, Sobieszczuk-Nowicka E, Borek S. New Insight into Plant Signaling: Extracellular ATP and Uncommon Nucleotides. Cells 2020; 9:E345. [PMID: 32024306 PMCID: PMC7072326 DOI: 10.3390/cells9020345] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2020] [Revised: 01/27/2020] [Accepted: 01/30/2020] [Indexed: 12/15/2022] Open
Abstract
New players in plant signaling are described in detail in this review: extracellular ATP (eATP) and uncommon nucleotides such as dinucleoside polyphosphates (NpnN's), adenosine 5'-phosphoramidate (NH2-pA), and extracellular NAD+ and NADP+ (eNAD(P)+). Recent molecular, physiological, and biochemical evidence implicating concurrently the signaling role of eATP, NpnN's, and NH2-pA in plant biology and the mechanistic events in which they are involved are discussed. Numerous studies have shown that they are often universal signaling messengers, which trigger a signaling cascade in similar reactions and processes among different kingdoms. We also present here, not described elsewhere, a working model of the NpnN' and NH2-pA signaling network in a plant cell where these nucleotides trigger induction of the phenylpropanoid and the isochorismic acid pathways yielding metabolites protecting the plant against various types of stresses. Through these signals, the plant responds to environmental stimuli by intensifying the production of various compounds, such as anthocyanins, lignin, stilbenes, and salicylic acid. Still, more research needs to be performed to identify signaling networks that involve uncommon nucleotides, followed by omic experiments to define network elements and processes that are controlled by these signals.
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Affiliation(s)
- Małgorzata Pietrowska-Borek
- Department of Biochemistry and Biotechnology, Faculty of Agronomy and Bioengineering, Poznań University of Life Sciences, Dojazd 11, 60-632 Poznań, Poland;
| | - Jędrzej Dobrogojski
- Department of Biochemistry and Biotechnology, Faculty of Agronomy and Bioengineering, Poznań University of Life Sciences, Dojazd 11, 60-632 Poznań, Poland;
| | - Ewa Sobieszczuk-Nowicka
- Department of Plant Physiology, Faculty of Biology, Adam Mickiewicz University, Poznań, Uniwersytetu Poznańskiego 6, 61-614 Poznań, Poland; (E.S.-N.); (S.B.)
| | - Sławomir Borek
- Department of Plant Physiology, Faculty of Biology, Adam Mickiewicz University, Poznań, Uniwersytetu Poznańskiego 6, 61-614 Poznań, Poland; (E.S.-N.); (S.B.)
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Matthus E, Sun J, Wang L, Bhat MG, Mohammad-Sidik AB, Wilkins KA, Leblanc-Fournier N, Legué V, Moulia B, Stacey G, Davies JM. DORN1/P2K1 and purino-calcium signalling in plants: making waves with extracellular ATP. ANNALS OF BOTANY 2020; 124:1227-1242. [PMID: 31904093 PMCID: PMC6943698 DOI: 10.1093/aob/mcz135] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Indexed: 05/03/2023]
Abstract
BACKGROUND AND AIMS Extracellular ATP governs a range of plant functions, including cell viability, adaptation and cross-kingdom interactions. Key functions of extracellular ATP in leaves and roots may involve an increase in cytosolic free calcium as a second messenger ('calcium signature'). The main aim here was to determine to what extent leaf and root calcium responses require the DORN1/P2K1 extracellular ATP receptor in Arabidopsis thaliana. The second aim was to test whether extracellular ATP can generate a calcium wave in the root. METHODS Leaf and root responses to extracellular ATP were reviewed for their possible links to calcium signalling and DORN1/P2K1. Leaves and roots of wild type and dorn1 plants were tested for cytosolic calcium increase in response to ATP, using aequorin. The spatial abundance of DORN1/P2K1 in the root was estimated using green fluorescent protein. Wild type roots expressing GCaMP3 were used to determine the spatial variation of cytosolic calcium increase in response to extracellular ATP. KEY RESULTS Leaf and root ATP-induced calcium signatures differed markedly. The leaf signature was only partially dependent on DORN1/P2K1, while the root signature was fully dependent. The distribution of DORN1/P2K1 in the root supports a key role in the generation of the apical calcium signature. Root apical and sub-apical calcium signatures may operate independently of each other but an apical calcium increase can drive a sub-apical increase, consistent with a calcium wave. CONCLUSION DORN1 could underpin several calcium-related responses but it may not be the only receptor for extracellular ATP in Arabidopsis. The root has the capacity for a calcium wave, triggered by extracellular ATP at the apex.
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Affiliation(s)
- Elsa Matthus
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | - Jian Sun
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
- Institute of Integrative Plant Biology, School of Life Science, Jiangsu Normal University, Xuzhou, China
| | - Limin Wang
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | - Madhura G Bhat
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | | | - Katie A Wilkins
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
| | | | - Valérie Legué
- Université Clermont Auvergne, INRA, PIAF, Clermont-Ferrand, France
| | - Bruno Moulia
- Université Clermont Auvergne, INRA, PIAF, Clermont-Ferrand, France
| | - Gary Stacey
- Divisions of Plant Science and Biochemistry, University of Missouri, Columbia, MO, USA
| | - Julia M Davies
- Department of Plant Sciences, University of Cambridge, Cambridge, UK
- For correspondence. E-mail
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Tanveer M, Shabala S. Neurotransmitters in Signalling and Adaptation to Salinity Stress in Plants. NEUROTRANSMITTERS IN PLANT SIGNALING AND COMMUNICATION 2020. [DOI: 10.1007/978-3-030-54478-2_3] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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60
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Cold plasma treatment induces phenolic accumulation and enhances antioxidant activity in fresh-cut pitaya (Hylocereus undatus) fruit. Lebensm Wiss Technol 2019. [DOI: 10.1016/j.lwt.2019.108447] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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61
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Liu W, Ni J, Shah FA, Ye K, Hu H, Wang Q, Wang D, Yao Y, Huang S, Hou J, Liu C, Wu L. Genome-wide identification, characterization and expression pattern analysis of APYRASE family members in response to abiotic and biotic stresses in wheat. PeerJ 2019; 7:e7622. [PMID: 31565565 PMCID: PMC6744936 DOI: 10.7717/peerj.7622] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2019] [Accepted: 08/05/2019] [Indexed: 12/16/2022] Open
Abstract
APYRASEs, which directly regulate intra- and extra-cellular ATP homeostasis, play a pivotal role in the regulation of various stress adaptations in mammals, bacteria and plants. In the present study, we identified and characterized wheat APYRASE family members at the genomic level in wheat. The results identified a total of nine APY homologs with conserved ACR domains. The sequence alignments, phylogenetic relations and conserved motifs of wheat APYs were bioinformatically analyzed. Although they share highly conserved secondary and tertiary structures, the wheat APYs could be mainly categorized into three groups, according to phylogenetic and structural analysis. Additionally, these APYs exhibited similar expression patterns in the root and shoot, among which TaAPY3-1, TaAPY3-3 and TaAPY3-4 had the highest expression levels. The time-course expression patterns of the eight APYs in response to biotic and abiotic stress in the wheat seedlings were also investigated. TaAPY3-2, TaAPY3-3, TaAPY3-4 and TaAPY6 exhibited strong sensitivity to all kinds of stresses in the leaves. Some APYs showed specific expression responses, such as TaAPY6 to heavy metal stress, and TaAPY7 to heat and salt stress. These results suggest that the stress-inducible APYs could have potential roles in the regulation of environmental stress adaptations. Moreover, the catalytic activity of TaAPY3-1 was further analyzed in the in vitro system. The results showed that TaAPY3-1 protein exhibited high catalytic activity in the degradation of ATP and ADP, but with low activity in degradation of TTP and GTP. It also has an extensive range of temperature adaptability, but preferred relatively acidic pH conditions. In this study, the genome-wide identification and characterization of APYs in wheat were suggested to be useful for further genetic modifications in the generation of high-stress-tolerant wheat cultivars.
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Affiliation(s)
- Wenbo Liu
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China.,University of Science and Technology of China, Hefei, China
| | - Jun Ni
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Faheem Afzal Shah
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Kaiqin Ye
- Anhui Province Key Laboratory of Medical Physics and Technology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Hao Hu
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Qiaojian Wang
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Dongdong Wang
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Yuanyuan Yao
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Shengwei Huang
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Jinyan Hou
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
| | - Chenghong Liu
- Biotechnology Research Institute, Shanghai Academy of Agricultural Sciences, Shanghai, China
| | - Lifang Wu
- Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China
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Yalak G, Shiu JY, Schoen I, Mitsi M, Vogel V. Phosphorylated fibronectin enhances cell attachment and upregulates mechanical cell functions. PLoS One 2019; 14:e0218893. [PMID: 31291285 PMCID: PMC6619657 DOI: 10.1371/journal.pone.0218893] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2019] [Accepted: 06/11/2019] [Indexed: 01/29/2023] Open
Abstract
A large number of extracellular matrix proteins have been found in phosphorylated states, yet little is known about how the phosphorylation of extracellular matrix proteins might affect cell functions. We thus tested the hypothesis whether the phosphorylation of fibronectin, a major adhesion protein, affects cell behavior. Controlled in vitro phosphorylation of fibronectin by a casein kinase II (CKII) significantly upregulated cell traction forces and total strain energy generated by fibroblasts on nanopillar arrays, and consequently other elementary cell functions including cell spreading and metabolic activity. Mass spectrometry of plasma fibronectin from healthy human donors then identified a constitutively phosphorylated site in the C-terminus, and numerous other residues that became phosphorylated by the CKII kinase in vitro. Our findings open up novel strategies for translational applications including targeting diseased ECM, or to develop assays that probe the phosphorylation state of the ECM or blood as potential cancer markers.
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Affiliation(s)
- Garif Yalak
- Laboratory of Applied Mechanobiology, Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zürich, Zurich, Switzerland
| | - Jau-Ye Shiu
- Laboratory of Applied Mechanobiology, Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zürich, Zurich, Switzerland
| | - Ingmar Schoen
- Laboratory of Applied Mechanobiology, Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zürich, Zurich, Switzerland
| | - Maria Mitsi
- Laboratory of Applied Mechanobiology, Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zürich, Zurich, Switzerland
| | - Viola Vogel
- Laboratory of Applied Mechanobiology, Institute of Translational Medicine, Department of Health Sciences and Technology, ETH Zürich, Zurich, Switzerland
- * E-mail:
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63
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Scheerer U, Trube N, Netzer F, Rennenberg H, Herschbach C. ATP as Phosphorus and Nitrogen Source for Nutrient Uptake by Fagus sylvatica and Populus x canescens Roots. FRONTIERS IN PLANT SCIENCE 2019; 10:378. [PMID: 31019519 PMCID: PMC6458296 DOI: 10.3389/fpls.2019.00378] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Accepted: 03/12/2019] [Indexed: 05/08/2023]
Abstract
The present study elucidated whether roots of temperate forest trees can take up organic phosphorus in the form of ATP. Detached non-mycorrhizal roots of beech (Fagus sylvatica) and gray poplar (Populus x canescens) were exposed under controlled conditions to 33P-ATP and/or 13C/15N labeled ATP in the presence and absence of the acid phosphatase inhibitor MoO4 2-. Accumulation of the respective label in the roots was used to calculate 33P, 13C and 15N uptake rates in ATP equivalents for comparison reason. The present data shown that a significant part of ATP was cleaved outside the roots before phosphate (Pi) was taken up. Furthermore, nucleotide uptake seems more reasonable after cleavage of at least one Pi unit as ADP, AMP and/or as the nucleoside adenosine. Similar results were obtained when still attached mycorrhizal roots of adult beech trees and their natural regeneration of two forest stands were exposed to ATP in the presence or absence of MoO4 2-. Cleavage of Pi from ATP by enzymes commonly present in the rhizosphere, such as extracellular acid phosphatases, ecto-apyrase and/or nucleotidases, prior ADP/AMP/adenosine uptake is highly probable but depended on the soil type and the pH of the soil solution. Although uptake of ATP/ADP/AMP cannot be excluded, uptake of the nucleoside adenosine without breakdown into its constituents ribose and adenine is highly evident. Based on the 33P, 13C, and 15N uptake rates calculated as equivalents of ATP the 'pro and contra' for the uptake of nucleotides and nucleosides is discussed. Short Summary Roots take up phosphorus from ATP as Pi after cleavage but might also take up ADP and/or AMP by yet unknown nucleotide transporter(s) because at least the nucleoside adenosine as N source is taken up without cleavage into its constituents ribose and adenine.
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Affiliation(s)
- Ursula Scheerer
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Niclas Trube
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Florian Netzer
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
- Chair of Ecosystem Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Heinz Rennenberg
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
| | - Cornelia Herschbach
- Chair of Tree Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
- Chair of Ecosystem Physiology, Institute of Forest Sciences, Albert-Ludwigs-University Freiburg, Freiburg, Germany
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64
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Matthus E, Wilkins KA, Swarbreck SM, Doddrell NH, Doccula FG, Costa A, Davies JM. Phosphate Starvation Alters Abiotic-Stress-Induced Cytosolic Free Calcium Increases in Roots. PLANT PHYSIOLOGY 2019; 179:1754-1767. [PMID: 30696750 PMCID: PMC6446763 DOI: 10.1104/pp.18.01469] [Citation(s) in RCA: 36] [Impact Index Per Article: 7.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2018] [Accepted: 01/17/2019] [Indexed: 05/08/2023]
Abstract
Phosphate (Pi) deficiency strongly limits plant growth, and plant roots foraging the soil for nutrients need to adapt to optimize Pi uptake. Ca2+ is known to signal in root development and adaptation but has to be tightly controlled, as it is highly toxic to Pi metabolism. Under Pi starvation and the resulting decreased cellular Pi pool, the use of cytosolic free Ca2+ ([Ca2+]cyt) as a signal transducer may therefore have to be altered. Employing aequorin-expressing Arabidopsis (Arabidopsis thaliana), we show that Pi starvation, but not nitrogen starvation, strongly dampens the [Ca2+]cyt increases evoked by mechanical, salt, osmotic, and oxidative stress as well as by extracellular nucleotides. The altered root [Ca2+]cyt response to extracellular ATP manifests during seedling development under chronic Pi deprivation but can be reversed by Pi resupply. Employing ratiometric imaging, we delineate that Pi-starved roots have a normal response to extracellular ATP at the apex but show a strongly dampened [Ca2+]cyt response in distal parts of the root tip, correlating with high reactive oxygen species levels induced by Pi starvation. Excluding iron, as well as Pi, rescues this altered [Ca2+]cyt response and restores reactive oxygen species levels to those seen under nutrient-replete conditions. These results indicate that, while Pi availability does not seem to be signaled through [Ca2+]cyt, Pi starvation strongly affects stress-induced [Ca2+]cyt signatures. These data reveal how plants can integrate nutritional and environmental cues, adding another layer of complexity to the use of Ca2+ as a signal transducer.
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Affiliation(s)
- Elsa Matthus
- Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom
| | - Katie A Wilkins
- Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom
| | - Stéphanie M Swarbreck
- Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom
| | - Nicholas H Doddrell
- Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom
| | | | - Alex Costa
- Department of Biosciences, University of Milan, 20133 Milan, Italy
- Institute of Biophysics, Consiglio Nazionale delle Ricerche, 20133 Milan, Italy
| | - Julia M Davies
- Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, United Kingdom
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Cui Z, Yang Z, Xu D. Synergistic Roles of Biphasic Ethylene and Hydrogen Peroxide in Wound-Induced Vessel Occlusions and Essential Oil Accumulation in Dalbergia odorifera. FRONTIERS IN PLANT SCIENCE 2019; 10:250. [PMID: 30906305 PMCID: PMC6418037 DOI: 10.3389/fpls.2019.00250] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/07/2018] [Accepted: 02/15/2019] [Indexed: 06/09/2023]
Abstract
The heartwood of Dalbergia odorifera (D. odorifera), named "Jiang Xiang" in traditional Chinese medicine, is highly valuable. Mechanical wounding induced the production of "Jiang Xiang" in D. odorifera. Ethylene and hydrogen peroxide (H2O2) are proposed to play vital roles in wound signaling. However, little is known about the role of ethylene or H2O2 in the wound-induced formation of vessel occlusions and biosynthesis of "Jiang Xiang" in D. odorifera. In this study, the pruning of D. odorifera saplings resulted in the synergistic biosynthesis of biphasic ethylene and H2O2, which was followed by formation of vessel occlusions and "Jiang Xiang" in the pruned stems. In this process, the H2O2 production stimulated higher biosynthesis of ethylene. Treatments with aminoethoxyvinylglycine (AVG), an inhibitor for ethylene biosynthesis and ascorbate acid (AsA), a scavenger of H2O2, markedly reduced the production of ethylene and H2O2, respectively, and the corresponding the percentage of vessels with occlusions (PVO), oil content, and the amount of "Jiang Xiang" formed. These results indicate that ethylene and H2O2 might be important wound signals in D. odorifera that induce vessel occlusions and formation of "Jiang Xiang," and thus ethylene and H2O2 might play vital roles in "Jiang Xiang" formation in pruned stems of D. odorifera.
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Affiliation(s)
| | | | - Daping Xu
- Research Institute of Tropical Forestry, Chinese Academy of Forestry, Guangzhou, China
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66
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Jia LY, Bai JY, Sun K, Wang RF, Feng HQ. Extracellular ATP released by copper stress could act as diffusible signal in alleviating the copper stress-induced cell death. PROTOPLASMA 2019; 256:491-501. [PMID: 30251212 DOI: 10.1007/s00709-018-1309-y] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Accepted: 09/10/2018] [Indexed: 06/08/2023]
Abstract
In the present work, by using tobacco cell suspension and wheat seedlings, we studied that eATP (extracellular ATP) released by copper (Cu) stress could act as diffusible signal in alleviating the Cu stress-induced cell death. A semipermeable membrane was fixed in the middle of a plastic box to divide the box into two equal compartments (A and B, respectively). This semipermeable membrane can prevent direct cell-to-cell (or seedling-to-seedling) contact and the diffusion of the macromolecules [such as ATPase (adenosine 5'-triphosphatase)] between these two compartments. The cell suspension directly stressed with CuCl2 was placed in compartment A and was incubated with the untreated cell suspension in compartment B. Such treatment significantly increased the levels of cell death and eATP content of the cell suspension in these two compartments. In contrast, addition of ATPase into the cell suspension directly stressed with CuCl2 decreased the eATP level in these two compartments but further increased the level of cell death in compartment B, compared to no addition of ATPase. Similar results were obtained when tobacco cell suspension was replaced by wheat seedlings. These observations indicate that when Cu stress from compartment A induced the plant cell death in compartment B, ATP transferred from compartment A could play a role in alleviating this cell death. Thus, it is suggested that eATP released by copper stress could act as diffusible signal in alleviating the Cu stress-induced cell death.
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Affiliation(s)
- Ling-Yun Jia
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China
| | - Jing-Yue Bai
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China
| | - Kun Sun
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China
| | - Rong-Fang Wang
- Institute of Chemical Engineering, Qingdao University of Science and Technology, Qingdao, 266042, China
| | - Han-Qing Feng
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China.
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67
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Lv F, Li S, Feng J, Liu P, Gao Z, Yang Y, Xu Y, Wei J. Hydrogen peroxide burst triggers accumulation of jasmonates and salicylic acid inducing sesquiterpene biosynthesis in wounded Aquilaria sinesis. JOURNAL OF PLANT PHYSIOLOGY 2019; 234-235:167-175. [PMID: 30818186 DOI: 10.1016/j.jplph.2019.02.006] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/11/2018] [Revised: 02/16/2019] [Accepted: 02/17/2019] [Indexed: 05/26/2023]
Abstract
Agarwood, a non-timber fragrant wood, is produced in wounded Aquilaria trees and widely used in perfume, incense, and medicine. Sesquiterpene is one of its main active compounds. It has been demonstrated that hydrogen peroxide (H2O2) plays a role in promoting agarwood sesquiterpene biosynthesis, but little is known about its signaling pathway. In this study, the pruning of actively growing saplings of A. sinensis resulted in an H2O2 burst and the accumulation of jasmonic acid (JA), salicylic acid (SA), and ethylene (ET), which was followed by the up-regulation of sesquiterpene synthase and the production of sesquiterpene in the pruned stems. This process could be enhanced by absorbed H2O2 and inhibited by an H2O2 scavenger (ascorbate, AsA) in pruned stems, although the concentration of ET and transcription of ET-related synthase genes remained unaffected. These results confirmed that the H2O2 burst in wounded stems triggered JA and SA accumulation to promote agarwood sesquiterpene biosynthesis. ET was also activated by injury that was independent with H2O2. All results excavated a full-scale signaling transduction nets among multiple stress signals during wound-induced agarwood production in A. sinensis and provide a new insight into improving the artificial technology of agarwood production.
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Affiliation(s)
- Feifei Lv
- Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College (Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine & Key Laboratory of State Administration of Traditional Chinese Medicine for Agarwood Sustainable Utilization), Haikou, 570311, China
| | - Shanshan Li
- Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College (Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine & Key Laboratory of State Administration of Traditional Chinese Medicine for Agarwood Sustainable Utilization), Haikou, 570311, China; Hainan Medical University, Haikou, 570102, China
| | - Jian Feng
- Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College (Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine & Key Laboratory of State Administration of Traditional Chinese Medicine for Agarwood Sustainable Utilization), Haikou, 570311, China
| | - Peiwei Liu
- Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College (Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine & Key Laboratory of State Administration of Traditional Chinese Medicine for Agarwood Sustainable Utilization), Haikou, 570311, China
| | - Zhihui Gao
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China
| | - Yun Yang
- Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College (Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine & Key Laboratory of State Administration of Traditional Chinese Medicine for Agarwood Sustainable Utilization), Haikou, 570311, China
| | - Yanhong Xu
- Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China
| | - Jianhe Wei
- Hainan Branch of the Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College (Hainan Provincial Key Laboratory of Resources Conservation and Development of Southern Medicine & Key Laboratory of State Administration of Traditional Chinese Medicine for Agarwood Sustainable Utilization), Haikou, 570311, China; Institute of Medicinal Plant Development, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing, 100193, China.
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68
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Jewell JB, Sowders JM, He R, Willis MA, Gang DR, Tanaka K. Extracellular ATP Shapes a Defense-Related Transcriptome Both Independently and along with Other Defense Signaling Pathways. PLANT PHYSIOLOGY 2019; 179:1144-1158. [PMID: 30630869 PMCID: PMC6393801 DOI: 10.1104/pp.18.01301] [Citation(s) in RCA: 60] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2018] [Accepted: 01/04/2019] [Indexed: 05/20/2023]
Abstract
ATP is not only an essential metabolite of cellular biochemistry but also acts as a signal in the extracellular milieu. In plants, extracellular ATP is monitored by the purinergic receptor P2K1. Recent studies have revealed that extracellular ATP acts as a damage-associated molecular pattern in plants, and its signaling through P2K1 is important for mounting an effective defense response against various pathogenic microorganisms. Biotrophic and necrotrophic pathogens attack plants using different strategies, to which plants respond accordingly with salicylate-based or jasmonate/ethylene-based defensive signaling, respectively. Interestingly, defense mediated by P2K1 is effective against pathogens of both lifestyles, raising the question of the level of interplay between extracellular ATP signaling and that of jasmonate, ethylene, and salicylate. To address this issue, we analyzed ATP-induced transcriptomes in wild-type Arabidopsis (Arabidopsis thaliana) seedlings and mutant seedlings defective in essential components in the signaling pathways of jasmonate, ethylene, and salicylate (classic defense hormones) as well as a mutant and an overexpression line of the P2K1 receptor. We found that P2K1 function is crucial for faithful ATP-induced transcriptional changes and that a subset of genes is more responsive in the P2K1 overexpression line. We also found that more than half of the ATP-responsive genes required signaling by one or more of the pathways for the classical defense hormones, with the jasmonate-based signaling being more critical than others. By contrast, the other ATP-responsive genes were unaffected by deficiencies in signaling for any of the classical defense hormones. These ATP-responsive genes were highly enriched for defense-related Gene Ontology terms. We further tested the ATP-induced genes in knockout mutants of transcription factors, demonstrating that MYCs acting downstream of the jasmonate receptor complex and calmodulin-binding transcription activators are nuclear transducers of P2K1-mediated extracellular ATP signaling.
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Affiliation(s)
- Jeremy B Jewell
- Department of Plant Pathology, Washington State University, Pullman, Washington 99164
| | - Joel M Sowders
- Department of Plant Pathology, Washington State University, Pullman, Washington 99164
- Molecular Plant Sciences Program, Washington State University, Pullman, Washington 99164
| | - Ruifeng He
- Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164
| | - Mark A Willis
- Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164
| | - David R Gang
- Molecular Plant Sciences Program, Washington State University, Pullman, Washington 99164
- Institute of Biological Chemistry, Washington State University, Pullman, Washington 99164
| | - Kiwamu Tanaka
- Department of Plant Pathology, Washington State University, Pullman, Washington 99164
- Molecular Plant Sciences Program, Washington State University, Pullman, Washington 99164
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69
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Nizam S, Qiang X, Wawra S, Nostadt R, Getzke F, Schwanke F, Dreyer I, Langen G, Zuccaro A. Serendipita indica E5'NT modulates extracellular nucleotide levels in the plant apoplast and affects fungal colonization. EMBO Rep 2019; 20:embr.201847430. [PMID: 30642845 PMCID: PMC6362346 DOI: 10.15252/embr.201847430] [Citation(s) in RCA: 46] [Impact Index Per Article: 9.2] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Revised: 12/13/2018] [Accepted: 12/14/2018] [Indexed: 12/13/2022] Open
Abstract
Extracellular adenosine 5′‐triphosphate (eATP) is an essential signaling molecule that mediates different cellular processes through its interaction with membrane‐associated receptor proteins in animals and plants. eATP regulates plant growth, development, and responses to biotic and abiotic stresses. Its accumulation in the apoplast induces ROS production and cytoplasmic calcium increase mediating a defense response to invading microbes. We show here that perception of extracellular nucleotides, such as eATP, is important in plant–fungus interactions and that during colonization by the beneficial root endophyte Serendipita indica eATP accumulates in the apoplast at early symbiotic stages. Using liquid chromatography–tandem mass spectrometry, and cytological and functional analysis, we show that S. indica secrets SiE5′NT, an enzymatically active ecto‐5′‐nucleotidase capable of hydrolyzing nucleotides in the apoplast. Arabidopsis thaliana lines producing extracellular SiE5′NT are significantly better colonized, have reduced eATP levels, and altered responses to biotic stresses, indicating that SiE5′NT functions as a compatibility factor. Our data suggest that extracellular bioactive nucleotides and their perception play an important role in fungus–root interactions and that fungal‐derived enzymes can modify apoplastic metabolites to promote fungal accommodation.
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Affiliation(s)
- Shadab Nizam
- Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.,Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), Cologne Biocenter, University of Cologne, Cologne, Germany
| | - Xiaoyu Qiang
- Max Planck Institute for Terrestrial Microbiology, Marburg, Germany.,Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), Cologne Biocenter, University of Cologne, Cologne, Germany
| | - Stephan Wawra
- Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), Cologne Biocenter, University of Cologne, Cologne, Germany
| | - Robin Nostadt
- Max Planck Institute for Terrestrial Microbiology, Marburg, Germany
| | - Felix Getzke
- Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), Cologne Biocenter, University of Cologne, Cologne, Germany
| | - Florian Schwanke
- Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), Cologne Biocenter, University of Cologne, Cologne, Germany
| | - Ingo Dreyer
- Centro de Bioinformática y Simulación Molecular (CBSM), Universidad de Talca, Talca, Chile
| | - Gregor Langen
- Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), Cologne Biocenter, University of Cologne, Cologne, Germany
| | - Alga Zuccaro
- Max Planck Institute for Terrestrial Microbiology, Marburg, Germany .,Botanical Institute, Cluster of Excellence on Plant Sciences (CEPLAS), Cologne Biocenter, University of Cologne, Cologne, Germany
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70
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Wang L, Stacey G, Leblanc-Fournier N, Legué V, Moulia B, Davies JM. Early Extracellular ATP Signaling in Arabidopsis Root Epidermis: A Multi-Conductance Process. FRONTIERS IN PLANT SCIENCE 2019; 10:1064. [PMID: 31552068 PMCID: PMC6737080 DOI: 10.3389/fpls.2019.01064] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2019] [Accepted: 08/06/2019] [Indexed: 05/13/2023]
Abstract
Adenosine 5'-triphosphate (ATP) is an important extracellular signaling agent, operating in growth regulation, stomatal conductance, and wound response. With the first receptor for extracellular ATP now identified in plants (P2K1/DORN1) and a plasma membrane NADPH oxidase revealed as its target, the search continues for the components of the signaling cascades they command. The Arabidopsis root elongation zone epidermal plasma membrane has recently been shown to contain cation transport pathways (channel conductances) that operate downstream of P2K1 and could contribute to extracellular ATP (eATP) signaling. Here, patch clamp electrophysiology has been used to delineate two further conductances from the root elongation zone epidermal plasma membrane that respond to eATP, including one that would permit chloride transport. This perspective addresses how these conductances compare to those previously characterized in roots and how they might operate together to enable early events in eATP signaling, including elevation of cytosolic-free calcium as a second messenger. The role of the reactive oxygen species (ROS) that could arise from eATP's activation of NADPH oxidases is considered in a qualitative model that also considers the regulation of plasma membrane potential by the concerted action of the various cation and anion conductances. The molecular identities of the channel conductances in eATP signaling remain enigmatic but may yet be found in the multigene families of glutamate receptor-like channels, cyclic nucleotide-gated channels, annexins, and aluminum-activated malate transporters.
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Affiliation(s)
- Limin Wang
- Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom
| | - Gary Stacey
- Divisions of Plant Science and Biochemistry, University of Missouri, Columbia, MO, United States
| | | | - Valérie Legué
- Université Clermont Auvergne, INRA, PIAF, Clermont-Ferrand, France
| | - Bruno Moulia
- Université Clermont Auvergne, INRA, PIAF, Clermont-Ferrand, France
| | - Julia M. Davies
- Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom
- *Correspondence: Julia M. Davies,
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71
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Wu Y, Qin B, Feng K, Yan R, Kang E, Liu T, Shang Z. Extracellular ATP promoted pollen germination and tube growth of Nicotiana tabacum through promoting K + and Ca 2+ absorption. PLANT REPRODUCTION 2018; 31:399-410. [PMID: 29934740 DOI: 10.1007/s00497-018-0341-6] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/22/2017] [Accepted: 06/15/2018] [Indexed: 05/15/2023]
Abstract
Extracellular ATP (eATP) plays an essential role in plant growth, development, and stress tolerance. Here, we report that eATP participated in Nicotiana tabacum pollen germination (PG) and pollen tube growth (PTG) by regulating K+ and Ca2+ influx. Exogenous ATP or ADP effectively promoted PG and PTG in a dose-dependent manner; weakly hydrolysable ATP analog (ATPγS) showed a similar effect. AMP, adenosine, adenine, and phosphate did not affect PG or PTG. Within a certain range, higher concentrations of K+ or Ca2+ in the medium increased the effect of ATP in promoting PG and PTG. However, in mediums containing K+ or Ca2+ concentrations above this range, the effect of ATP was reversed, resulting in PG and PTG inhibition. Ca2+ chelators (EGTA), Ca2+ channel blockers, and K+ channel blockers suppressed ATP-promoted PG and PTG. Results from a patch clamp showed that ATP activated a K+ and Ca2+ influx in pollen protoplasts. These results suggest that, as an apoplastic signal, eATP may be involved in PG and PTG via regulating Ca2+ and K+ absorption.
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Affiliation(s)
- Yansheng Wu
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang, 050024, Hebei, China
- Department of Chemistry Engineering and Biological Technology, Xingtai University, Xingtai, 054001, Hebei, China
| | - Baozhi Qin
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang, 050024, Hebei, China
| | - Kaili Feng
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang, 050024, Hebei, China
| | - Ruolin Yan
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang, 050024, Hebei, China
| | - Erfang Kang
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang, 050024, Hebei, China
| | - Ting Liu
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang, 050024, Hebei, China
| | - Zhonglin Shang
- Hebei Key Laboratory of Molecular and Cellular Biology, Key Laboratory of Molecular and Cellular Biology of the Ministry of Education, College of Life Sciences, Hebei Normal University, Shijiazhuang, 050024, Hebei, China.
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72
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Wang QW, Jia LY, Shi DL, Wang RF, Lu LN, Xie JJ, Sun K, Feng HQ, Li X. Effects of extracellular ATP on local and systemic responses of bean (Phaseolus vulgaris L) leaves to wounding. Biosci Biotechnol Biochem 2018; 83:417-428. [PMID: 30458666 DOI: 10.1080/09168451.2018.1547623] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Wounding increased the extracellular Adenosine 5'-triphosphate (eATP) level of kidney bean leaves. Treatment with wounding or exogenous ATP increased the hydrogen peroxide (H2O2) content, activities of catalase and polyphenol oxidase, and malondialdehyde content in both the treated and systemic leaves. Pre-treatment with ATP-degrading enzyme, apyrase, to the wounded leaves reduced the wound-induced local and systemic increases in H2O2 content, activities of catalase and polyphenol oxidase, and malondialdehyde content. Application of dimethylthiourea (DMTU) and diphenylene iodonium (DPI) to the wounded and ATP-treated leaves, respectively, reduced the wound- and ATP-induced local and systemic increases in H2O2 content, activities of catalase and polyphenol oxidase, and malondialdehyde content. Moreover, the wound- and ATP-induced systemic increases of these physiological parameters were suppressed when DMTU or DPI applied to leaf petiole of the wounded and ATP-treated leaves. These results suggest that eATP at wounded sites could mediate the wound-induced local and systemic responses by H2O2-dependent signal transduction.
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Affiliation(s)
- Qing-Wen Wang
- a Department of Biology Science, College of Life Sciences , Northwest Normal University , Lanzhou , China
| | - Lin-Yun Jia
- a Department of Biology Science, College of Life Sciences , Northwest Normal University , Lanzhou , China
| | - Dai-Long Shi
- a Department of Biology Science, College of Life Sciences , Northwest Normal University , Lanzhou , China
| | - Rong-Fang Wang
- b Institute of Chemical Engineering , Qingdao University of Science and Technology , Qingdao , China
| | - Li-Na Lu
- a Department of Biology Science, College of Life Sciences , Northwest Normal University , Lanzhou , China
| | - Jia-Jia Xie
- a Department of Biology Science, College of Life Sciences , Northwest Normal University , Lanzhou , China
| | - Kun Sun
- a Department of Biology Science, College of Life Sciences , Northwest Normal University , Lanzhou , China
| | - Han-Qing Feng
- a Department of Biology Science, College of Life Sciences , Northwest Normal University , Lanzhou , China
| | - Xin Li
- c Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations , Lanzhou University , Lanzhou , China
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73
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Clark G, Roux SJ. Role of Ca 2+ in Mediating Plant Responses to Extracellular ATP and ADP. Int J Mol Sci 2018; 19:E3590. [PMID: 30441766 PMCID: PMC6274673 DOI: 10.3390/ijms19113590] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2018] [Accepted: 11/08/2018] [Indexed: 12/30/2022] Open
Abstract
Among the most recently discovered chemical regulators of plant growth and development are extracellular nucleotides, especially extracellular ATP (eATP) and extracellular ADP (eADP). Plant cells release ATP into their extracellular matrix under a variety of different circumstances, and this eATP can then function as an agonist that binds to a specific receptor and induces signaling changes, the earliest of which is an increase in the concentration of cytosolic calcium ([Ca2+]cyt). This initial change is then amplified into downstream-signaling changes that include increased levels of reactive oxygen species and nitric oxide, which ultimately lead to major changes in the growth rate, defense responses, and leaf stomatal apertures of plants. This review presents and discusses the evidence that links receptor activation to increased [Ca2+]cyt and, ultimately, to growth and diverse adaptive changes in plant development. It also discusses the evidence that increased [Ca2+]cyt also enhances the activity of apyrase (nucleoside triphosphate diphosphohydrolase) enzymes that function in multiple subcellular locales to hydrolyze ATP and ADP, and thus limit or terminate the effects of these potent regulators.
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Affiliation(s)
- Greg Clark
- Department of Molecular Biosciences, University of Texas, Austin, TX 78712, USA.
| | - Stanley J Roux
- Department of Molecular Biosciences, University of Texas, Austin, TX 78712, USA.
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74
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Elagamey E, Narula K, Sinha A, Ghosh S, Abdellatef MAE, Chakraborty N, Chakraborty S. Quantitative Extracellular Matrix Proteomics Suggests Cell Wall Reprogramming in Host-Specific Immunity During Vascular Wilt Caused by Fusarium oxysporum in Chickpea. Proteomics 2018; 17. [PMID: 29144021 DOI: 10.1002/pmic.201600374] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2017] [Revised: 10/25/2017] [Indexed: 01/27/2023]
Abstract
Extracellular matrix (ECM) is the unique organelle that perceives stress signals and reprograms molecular events of host cell during patho-stress. However, our understanding of how ECM dictates plant immunity is largely unknown. Vascular wilt caused by the soil borne filamentous fungus Fusarium oxysporum is a major impediment for global crop productivity. To elucidate the role of ECM proteins and molecular mechanism associated with cell wall mediated immunity, the temporal changes of ECM proteome was studied in vascular wilt resistant chickpea cultivar upon F. oxysporum infection. The 2DE protein profiling coupled with mass spectrometric analysis identified 166 immune responsive proteins (IRPs) involved in variety of functions. Our data suggest that wall remodeling; protein translocation, stabilization, and chitin triggered immunity; and extracellular ATP signaling are major players in early, middle, and later phases of ECM signaling during fungal attack. Furthermore, we interrogated the proteome data using network analysis that identified modules enriched in known and novel immunity-related prognostic proteins centered around nascent aminopolypeptide complex (NAC), amine oxidase, thioredoxin, and chaperonin. This study for the first time provides an insight into the complex network operating in the ECM and impinges on the surveillance mechanism of innate immunity during patho-stress in crop plant.
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Affiliation(s)
- Eman Elagamey
- National Institute of Plant Genome Research, New Delhi, India.,Plant Pathology Research Institute, Agricultural Research Center (ARC), Giza, Egypt
| | - Kanika Narula
- National Institute of Plant Genome Research, New Delhi, India
| | - Arunima Sinha
- National Institute of Plant Genome Research, New Delhi, India
| | - Sudip Ghosh
- National Institute of Plant Genome Research, New Delhi, India
| | - Magdi A E Abdellatef
- National Institute of Plant Genome Research, New Delhi, India.,Plant Pathology Research Institute, Agricultural Research Center (ARC), Giza, Egypt
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75
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Molecular Mechanism of Plant Recognition of Extracellular ATP. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2018; 1051:233-253. [PMID: 29064066 DOI: 10.1007/5584_2017_110] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Adenosine 5'-triphosphate (ATP), a ubiquitously dispersed biomolecule, is not only a major source of biochemical energy for living cells, but also acts as a critical signaling molecule through inter-cellular communication. Recent studies have clearly shown that extracellular ATP is involved in various physiological processes in plants, including root growth, stomata movement, pollen tube development, gravitropism, and abiotic/biotic stress responses. The first plant purinergic receptor for extracellular ATP, DORN1 (the founding member of the P2K family of purinergic receptors), was identified in Arabidopsis thaliana by a forward genetic screen. DORN1 consists of an extracellular lectin domain, transmembrane domain, and serine/threonine kinase, intracellular domain. The predicted structure of the DORN1 extracellular domain revealed putative key ATP binding residues but an apparent lack of sugar binding. In this chapter, we summarize recent studies on the molecular mechanism of plant recognition of extracellular ATP with specific reference to the role of DORN1.
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76
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Tripathi D, Tanaka K. A crosstalk between extracellular ATP and jasmonate signaling pathways for plant defense. PLANT SIGNALING & BEHAVIOR 2018; 13:e1432229. [PMID: 29370573 PMCID: PMC6103277 DOI: 10.1080/15592324.2018.1432229] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2018] [Accepted: 01/22/2018] [Indexed: 05/24/2023]
Abstract
Damage-associated molecular patterns (DAMPs), such as extracellular ATP, act as danger signals in response to biotic and abiotic stresses. Extracellular ATP is perceived by a plant purinoceptor, P2 receptor kinase 1 (P2K1), inducing downstream signaling for defense responses. How ATP induces these defense responses has not been well studied. A recent study by Tripathi et al. (Plant Physiology, 176: 511-523, 2018) revealed a synergistic interaction between extracellular ATP and jasmonate (JA) signaling during plant defense responses. This signaling crosstalk requires the formation of secondary messengers, i.e., cytosolic calcium, reactive oxygen species, and nitric oxide. This finding has given a new direction towards understanding the defense signals activated by DAMPs. In this addendum, we discuss possible insights into how extracellular ATP signaling interacts with the JA signaling pathway for plant defense responses.
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Affiliation(s)
- Diwaker Tripathi
- Department of Plant Pathology, Washington State University, Pullman, WA, USA
| | - Kiwamu Tanaka
- Department of Plant Pathology, Washington State University, Pullman, WA, USA
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77
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Tripathi D, Zhang T, Koo AJ, Stacey G, Tanaka K. Extracellular ATP Acts on Jasmonate Signaling to Reinforce Plant Defense. PLANT PHYSIOLOGY 2018; 176:511-523. [PMID: 29180381 PMCID: PMC6108377 DOI: 10.1104/pp.17.01477] [Citation(s) in RCA: 91] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Accepted: 11/22/2017] [Indexed: 05/20/2023]
Abstract
Damaged cells send various signals to stimulate defense responses. Recent identification and genetic studies of the plant purinoceptor, P2K1 (also known as DORN1), have demonstrated that extracellular ATP is a signal involved in plant stress responses, including wounding, perhaps to evoke plant defense. However, it remains largely unknown how extracellular ATP induces plant defense responses. Here, we demonstrate that extracellular ATP induces plant defense mediated through activation of the intracellular signaling of jasmonate (JA), a well-characterized defense hormone. In Arabidopsis (Arabidopsis thaliana) leaves, ATP pretreatment induced resistance against the necrotrophic fungus, Botrytis cinerea The induced resistance was enhanced in the P2K1 receptor overexpression line, but reduced in the receptor mutant, dorn1-3 Mining the transcriptome data revealed that ATP induces a set of JA-induced genes. In addition, the P2K1-associated coexpression network contains defense-related genes, including those encoding jasmonate ZIM-domain (JAZ) proteins, which play key roles as repressors of JA signaling. We examined whether extracellular ATP impacts the stability of JAZ1 in Arabidopsis. The results showed that the JAZ1 stability decreased in response to ATP addition in a proteasome-dependent manner. This reduction required intracellular signaling via second messengers-cytosolic calcium, reactive oxygen species, and nitric oxide. Interestingly, the ATP-induced JAZ1 degradation was attenuated in the JA receptor mutant, coi1, but not in the JA biosynthesis mutant, aos, or upon addition of JA biosynthesis inhibitors. Immunoprecipitation analysis demonstrated that ATP increases the interaction between COI1 and JAZ1, suggesting direct cross talk between extracellular ATP and JA in intracellular signaling events. Taken together, these results suggest that extracellular ATP signaling directly impacts the JA signaling pathway to maximize plant defense responses.
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Affiliation(s)
- Diwaker Tripathi
- Department of Plant Pathology, Washington State University, Pullman, Washington 99164
| | - Tong Zhang
- Divisions of Plant Sciences and Biochemistry, University of Missouri, Columbia, Missouri 65211
| | - Abraham J Koo
- Divisions of Plant Sciences and Biochemistry, University of Missouri, Columbia, Missouri 65211
| | - Gary Stacey
- Divisions of Plant Sciences and Biochemistry, University of Missouri, Columbia, Missouri 65211
| | - Kiwamu Tanaka
- Department of Plant Pathology, Washington State University, Pullman, Washington 99164
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Hu CH, Wei XY, Yuan B, Yao LB, Ma TT, Zhang PP, Wang X, Wang PQ, Liu WT, Li WQ, Meng LS, Chen KM. Genome-Wide Identification and Functional Analysis of NADPH Oxidase Family Genes in Wheat During Development and Environmental Stress Responses. FRONTIERS IN PLANT SCIENCE 2018; 9:906. [PMID: 30083172 PMCID: PMC6065054 DOI: 10.3389/fpls.2018.00906] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/26/2018] [Accepted: 06/08/2018] [Indexed: 05/06/2023]
Abstract
As the key producers of reactive oxygen species (ROS), NADPH oxidases (NOXs), also known as respiratory burst oxidase homologs (RBOHs), play crucial roles in various biological processes in plants with considerable evolutionary selection and functional diversity in the entire terrestrial plant kingdom. However, only limited resources are available on the phylogenesis and functions of this gene family in wheat. Here, a total of 46 NOX family genes were identified in the wheat genome, and these NOXs could be classified into three subgroups: typical TaNOXs, TaNOX-likes, and ferric reduction oxidases (TaFROs). Phylogenetic analysis indicated that the typical TaNOXs might originate from TaFROs during evolution, and the TaFROs located on Chr 2 might be the most ancient forms of TaNOXs. TaNOXs are highly expressed in wheat with distinct tissue or organ-specificity and stress-inducible diversity. A large-scale expression and/or coexpression analysis demonstrated that TaNOXs can be divided into four functional groups with different expression patterns under a broad range of environmental stresses. Different TaNOXs are coexpressed with different sets of other genes, which widely participate in several important intracellular processes such as cell wall biosynthesis, defence response, and signal transduction, suggesting their vital but diversity of roles in plant growth regulation and stress responses of wheat.
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Affiliation(s)
- Chun-Hong Hu
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
- Department of General Biology, College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, China
| | - Xiao-Yong Wei
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Bo Yuan
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Lin-Bo Yao
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Tian-Tian Ma
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Peng-Peng Zhang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Xiang Wang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Peng-Qi Wang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Wen-Ting Liu
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Wen-Qiang Li
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
| | - Lai-Sheng Meng
- The Key Laboratory of Biotechnology for Medicinal Plant of Jiangsu Province, School of Life Sciences, Jiangsu Normal University, Xuzhou, China
| | - Kun-Ming Chen
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, China
- *Correspondence: Kun-Ming Chen ;
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79
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Hou QZ, Ye GJ, Wang RF, Jia LY, Liang JY, Feng HQ, Wen J, Shi DL, Wang QW. Changes by cadmium stress in lipid peroxidation and activities of lipoxygenase and antioxidant enzymes in Arabidopsis are associated with extracellular ATP. Biologia (Bratisl) 2017. [DOI: 10.1515/biolog-2017-0176] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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80
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Extracellular ATP elicits DORN1-mediated RBOHD phosphorylation to regulate stomatal aperture. Nat Commun 2017; 8:2265. [PMID: 29273780 PMCID: PMC5741621 DOI: 10.1038/s41467-017-02340-3] [Citation(s) in RCA: 118] [Impact Index Per Article: 16.9] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2017] [Accepted: 11/21/2017] [Indexed: 02/05/2023] Open
Abstract
In addition to acting as a cellular energy source, ATP can also act as a damage-associated molecular pattern in both animals and plants. Stomata are leaf pores that control gas exchange and, therefore, impact critical functions such as photosynthesis, drought tolerance, and also are the preferred entry point for pathogens. Here we show the addition of ATP leads to the rapid closure of leaf stomata and enhanced resistance to the bacterial pathogen Psuedomonas syringae. This response is mediated by ATP recognition by the receptor DORN1, followed by direct phosphorylation of the NADPH oxidase RBOHD, resulting in elevated production of reactive oxygen species and stomatal closure. Mutation of DORN1 phosphorylation sites on RBOHD eliminates the ability of ATP to induce stomatal closure. The data implicate purinergic signaling via DORN1 in the control of stomatal aperture with important implications for the control of plant photosynthesis, water homeostasis, pathogen resistance, and ultimately yield. Extracellular ATP acts as a damage-associated molecular pattern that triggers signaling responses to wounding and environmental stimuli in plants. Here Chen et al. show that ATP perception by DORN1 can trigger stomatal closure mediated via RBOHD phosphorylation and ROS production.
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81
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Kwak SY, Giraldo JP, Wong MH, Koman VB, Lew TTS, Ell J, Weidman MC, Sinclair RM, Landry MP, Tisdale WA, Strano MS. A Nanobionic Light-Emitting Plant. NANO LETTERS 2017; 17:7951-7961. [PMID: 29148804 DOI: 10.1021/acs.nanolett.7b04369] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
The engineering of living plants for visible light emission and sustainable illumination is compelling because plants possess independent energy generation and storage mechanisms and autonomous self-repair. Herein, we demonstrate a plant nanobionic approach that enables exceptional luminosity and lifetime utilizing four chemically interacting nanoparticles, including firefly luciferase conjugated silica (SNP-Luc), d-luciferin releasing poly(lactic-co-glycolic acid) (PLGA-LH2), coenzyme A functionalized chitosan (CS-CoA) and semiconductor nanocrystal phosphors for longer wavelength modulation. An in vitro kinetic model incorporating the release rates of the nanoparticles is developed to maximize the chemiluminescent lifetimes to exceed 21.5 h. In watercress (Nasturtium officinale) and other species, the nanoparticles circumvent limitations such as luciferin toxicity above 400 μM and colocalization of enzymatic reactions near high adenosine triphosphate (ATP) production. Pressurized bath infusion of nanoparticles (PBIN) is introduced to deliver a mixture of nanoparticles to the entire living plant, well described using a nanofluidic mathematical model. We rationally design nanoparticle size and charge to control localization within distinct tissues compartments with 10 nm nanoparticles localizing within the leaf mesophyll and stomata guard cells, and those larger than 100 nm segregated in the leaf mesophyll. The results are mature watercress plants that emit greater than 1.44 × 1012 photons/sec or 50% of 1 μW commercial luminescent diodes and modulate "off" and "on" states by chemical addition of dehydroluciferin and coenzyme A, respectively. We show that CdSe nanocrystals can shift the chemiluminescent emission to 760 nm enabling near-infrared (nIR) signaling. These results advance the viability of nanobionic plants as self-powered photonics, direct and indirect light sources.
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Affiliation(s)
- Seon-Yeong Kwak
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
| | - Juan Pablo Giraldo
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
- Department of Botany and Plant Sciences, University of California , 3401 Watkins Drive, Riverside, California United States
| | - Min Hao Wong
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
| | - Volodymyr B Koman
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
| | - Tedrick Thomas Salim Lew
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
| | - Jon Ell
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
| | - Mark C Weidman
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
| | - Rosalie M Sinclair
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
| | - Markita P Landry
- Department of Chemical and Biomolecular Engineering, University of California , 201 Gilman Hall, Berkeley, California United States
| | - William A Tisdale
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
| | - Michael S Strano
- Department of Chemical Engineering, Massachusetts Institute of Technology , 77 Massachusetts Aveue, Cambridge, Massachusetts United States
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82
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Cacas JL, Gerbeau-Pissot P, Fromentin J, Cantrel C, Thomas D, Jeannette E, Kalachova T, Mongrand S, Simon-Plas F, Ruelland E. Diacylglycerol kinases activate tobacco NADPH oxidase-dependent oxidative burst in response to cryptogein. PLANT, CELL & ENVIRONMENT 2017; 40:585-598. [PMID: 27272019 DOI: 10.1111/pce.12771] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2016] [Revised: 05/23/2016] [Accepted: 05/24/2016] [Indexed: 05/20/2023]
Abstract
Cryptogein is a 10 kDa protein secreted by the oomycete Phytophthora cryptogea that activates defence mechanisms in tobacco plants. Among early signalling events triggered by this microbial-associated molecular pattern is a transient apoplastic oxidative burst which is dependent on the nicotinamide adenine dinucleotide phosphate (NADPH) oxidase activity of the RESPIRATORY BURST OXIDASE HOMOLOG isoform D (RBOHD). Using radioactive [33 P]-orthophosphate labelling of tobacco Bright Yellow-2 suspension cells, we here provide in vivo evidence for a rapid accumulation of phosphatidic acid (PA) in response to cryptogein because of the coordinated onset of phosphoinositide-dependent phospholipase C and diacylglycerol kinase (DGK) activities. Both enzyme specific inhibitors and silencing of the phylogenetic cluster III of the tobacco DGK family were found to reduce PA production upon elicitation and to strongly decrease the RBOHD-mediated oxidative burst. Therefore, it appears that PA originating from DGK controls NADPH-oxidase activity. Amongst cluster III DGKs, the expression of DGK5-like was up-regulated in response to cryptogein. Besides DGK5-like is likely to be the main cluster III DGK isoform silenced in one of our mutant lines, making it a strong candidate for the observed response to cryptogein. The relevance of these results is discussed with regard to early signalling lipid-mediated events in plant immunity.
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Affiliation(s)
- Jean-Luc Cacas
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Patricia Gerbeau-Pissot
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Jérôme Fromentin
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Catherine Cantrel
- UPMC UnivParis06, UR5, Physiologie Cellulaire et Moléculaire des Plantes, 4 place Jussieu, 75252, Paris cedex 05, France
| | - Dominique Thomas
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Emmanuelle Jeannette
- UPMC UnivParis06, UR5, Physiologie Cellulaire et Moléculaire des Plantes, 4 place Jussieu, 75252, Paris cedex 05, France
| | - Tetiana Kalachova
- UPE, UPEC, Institut d'Ecologie et des Sciences de l'Environnement de Paris, 61 avenue du général de Gaulle, 94010, Créteil, France
- CNRS, UMR7618, Institut d'Ecologie et des Sciences de l'Environnement de Paris, 61 avenue du général de Gaulle, 94010, Créteil, France
| | - Sébastien Mongrand
- CNRS, UMR 5200 Laboratoire de Biogenèse Membranaire, INRA Bordeaux Aquitaine, BP81, F-33883, Villenave d'Ornon, France
| | - Françoise Simon-Plas
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Eric Ruelland
- UPMC UnivParis06, UR5, Physiologie Cellulaire et Moléculaire des Plantes, 4 place Jussieu, 75252, Paris cedex 05, France
- UPE, UPEC, Institut d'Ecologie et des Sciences de l'Environnement de Paris, 61 avenue du général de Gaulle, 94010, Créteil, France
- CNRS, UMR7618, Institut d'Ecologie et des Sciences de l'Environnement de Paris, 61 avenue du général de Gaulle, 94010, Créteil, France
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83
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Zhang L, Zhang F, Melotto M, Yao J, He SY. Jasmonate signaling and manipulation by pathogens and insects. JOURNAL OF EXPERIMENTAL BOTANY 2017; 68:1371-1385. [PMID: 28069779 PMCID: PMC6075518 DOI: 10.1093/jxb/erw478] [Citation(s) in RCA: 117] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2016] [Accepted: 12/01/2016] [Indexed: 05/18/2023]
Abstract
Plants synthesize jasmonates (JAs) in response to developmental cues or environmental stresses, in order to coordinate plant growth, development or defense against pathogens and herbivores. Perception of pathogen or herbivore attack promotes synthesis of jasmonoyl-L-isoleucine (JA-Ile), which binds to the COI1-JAZ receptor, triggering the degradation of JAZ repressors and induction of transcriptional reprogramming associated with plant defense. Interestingly, some virulent pathogens have evolved various strategies to manipulate JA signaling to facilitate their exploitation of plant hosts. In this review, we focus on recent advances in understanding the mechanism underlying the enigmatic switch between transcriptional repression and hormone-dependent transcriptional activation of JA signaling. We also discuss various strategies used by pathogens and insects to manipulate JA signaling and how interfering with this could be used as a novel means of disease control.
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Affiliation(s)
- Li Zhang
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824
- Department of Plant Biology, Michigan State University, East Lansing, MI 48824
| | - Feng Zhang
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824
- Laboratory of Structural Sciences and Laboratory of Structural Biology and Biochemistry, Van Andel Research Institute, Grand Rapids, MI 49503
- College of Plant Protection, Nanjing Agricultural University, No. 1 Weigang, 210095, Nanjing, Jiangsu Province, China
| | - Maeli Melotto
- Department of Plant Sciences, University of California, Davis, CA 95616
| | - Jian Yao
- Department of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008
| | - Sheng Yang He
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI 48824
- Department of Plant Biology, Michigan State University, East Lansing, MI 48824
- Plant Resilience Institute, Michigan State University, East Lansing, MI 48824
- Howard Hughes Medical Institute, Michigan State University, East Lansing, MI 48824
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84
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Jacobo-Velázquez DA, Cuéllar-Villarreal MDR, Welti-Chanes J, Cisneros-Zevallos L, Ramos-Parra PA, Hernández-Brenes C. Nonthermal processing technologies as elicitors to induce the biosynthesis and accumulation of nutraceuticals in plant foods. Trends Food Sci Technol 2017. [DOI: 10.1016/j.tifs.2016.10.021] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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85
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Podgórska A, Burian M, Szal B. Extra-Cellular But Extra-Ordinarily Important for Cells: Apoplastic Reactive Oxygen Species Metabolism. FRONTIERS IN PLANT SCIENCE 2017; 8:1353. [PMID: 28878783 PMCID: PMC5572287 DOI: 10.3389/fpls.2017.01353] [Citation(s) in RCA: 63] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Accepted: 07/20/2017] [Indexed: 05/18/2023]
Abstract
Reactive oxygen species (ROS), by their very nature, are highly reactive, and it is no surprise that they can cause damage to organic molecules. In cells, ROS are produced as byproducts of many metabolic reactions, but plants are prepared for this ROS output. Even though extracellular ROS generation constitutes only a minor part of a cell's total ROS level, this fraction is of extraordinary importance. In an active apoplastic ROS burst, it is mainly the respiratory burst oxidases and peroxidases that are engaged, and defects of these enzymes can affect plant development and stress responses. It must be highlighted that there are also other less well-known enzymatic or non-enzymatic ROS sources. There is a need for ROS detoxification in the apoplast, and almost all cellular antioxidants are present in this space, but the activity of antioxidant enzymes and the concentration of low-mass antioxidants is very low. The low antioxidant efficiency in the apoplast allows ROS to accumulate easily, which is a condition for ROS signaling. Therefore, the apoplastic ROS/antioxidant homeostasis is actively engaged in the reception and reaction to many biotic and abiotic stresses.
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Affiliation(s)
| | | | - Bożena Szal
- *Correspondence: Bożena Szal, Anna Podgórska,
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86
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Zhu R, Dong X, Hao W, Gao W, Zhang W, Xia S, Liu T, Shang Z. Heterotrimeric G Protein-Regulated Ca 2+ Influx and PIN2 Asymmetric Distribution Are Involved in Arabidopsis thaliana Roots' Avoidance Response to Extracellular ATP. FRONTIERS IN PLANT SCIENCE 2017; 8:1522. [PMID: 28919907 PMCID: PMC5585194 DOI: 10.3389/fpls.2017.01522] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 08/18/2017] [Indexed: 05/04/2023]
Abstract
Extracellular ATP (eATP) has been reported to be involved in plant growth as a primary messenger in the apoplast. Here, roots of Arabidopsis thaliana seedlings growing in jointed medium bent upon contact with ATP-containing medium to keep away from eATP, showing a marked avoidance response. Roots responded similarly to ADP and bz-ATP but did not respond to AMP and GTP. The eATP avoidance response was reduced in loss-of-function mutants of heterotrimeric G protein α subunit (Gα) (gpa1-1 and gpa1-2) and enhanced in Gα-over-expression (OE) lines (wGα and cGα). Ethylenebis(oxyethylenenitrilo) tetraacetic acid (EGTA) and Gd3+ remarkably suppressed eATP-induced root bending. ATP-stimulated Ca2+ influx was impaired in Gα null mutants and increased in its OE lines. DR5-GFP and PIN2 were asymmetrically distributed in ATP-stimulated root tips, this effect was strongly suppressed by EGTA and diminished in Gα null mutants. In addition, some eATP-induced genes' expression was also impaired in Gα null mutants. Based on these results, we propose that heterotrimeric Gα-regulated Ca2+ influx and PIN2 distribution may be key signaling events in eATP sensing and avoidance response in Arabidopsis thaliana roots.
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87
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Choi HW, Klessig DF. DAMPs, MAMPs, and NAMPs in plant innate immunity. BMC PLANT BIOLOGY 2016. [PMID: 27782807 DOI: 10.1186/s12870-016-0921-232] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
BACKGROUND Multicellular organisms have evolved systems/mechanisms to detect various forms of danger, including attack by microbial pathogens and a variety of pests, as well as tissue and cellular damage. Detection via cell-surface receptors activates an ancient and evolutionarily conserved innate immune system. RESULT Potentially harmful microorganisms are recognized by the presence of molecules or parts of molecules that have structures or chemical patterns unique to microbes and thus are perceived as non-self/foreign. They are referred to as Microbe-Associated Molecular Patterns (MAMPs). Recently, a class of small molecules that is made only by nematodes, and that functions as pheromones in these organisms, was shown to be recognized by a wide range of plants. In the presence of these molecules, termed Nematode-Associated Molecular Patterns (NAMPs), plants activate innate immune responses and display enhanced resistance to a broad spectrum of microbial and nematode pathogens. In addition to pathogen attack, the relocation of various endogenous molecules or parts of molecules, generally to the extracellular milieu, as a result of tissue or cellular damage is perceived as a danger signal, and it leads to the induction of innate immune responses. These relocated endogenous inducers are called Damage-Associated Molecular Patterns (DAMPs). CONCLUSIONS This mini-review is focused on plant DAMPs, including the recently discovered Arabidopsis HMGB3, which is the counterpart of the prototypic animal DAMP HMGB1. The plant DAMPs will be presented in the context of plant MAMPs and NAMPs, as well as animal DAMPs.
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Affiliation(s)
- Hyong Woo Choi
- Boyce Thompson Institute, Cornell University, 533 Tower Road, Ithaca, NY, 14853, USA
| | - Daniel F Klessig
- Boyce Thompson Institute, Cornell University, 533 Tower Road, Ithaca, NY, 14853, USA.
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88
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Choi HW, Klessig DF. DAMPs, MAMPs, and NAMPs in plant innate immunity. BMC PLANT BIOLOGY 2016; 16:232. [PMID: 27782807 PMCID: PMC5080799 DOI: 10.1186/s12870-016-0921-2] [Citation(s) in RCA: 160] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2016] [Accepted: 10/19/2016] [Indexed: 05/13/2023]
Abstract
BACKGROUND Multicellular organisms have evolved systems/mechanisms to detect various forms of danger, including attack by microbial pathogens and a variety of pests, as well as tissue and cellular damage. Detection via cell-surface receptors activates an ancient and evolutionarily conserved innate immune system. RESULT Potentially harmful microorganisms are recognized by the presence of molecules or parts of molecules that have structures or chemical patterns unique to microbes and thus are perceived as non-self/foreign. They are referred to as Microbe-Associated Molecular Patterns (MAMPs). Recently, a class of small molecules that is made only by nematodes, and that functions as pheromones in these organisms, was shown to be recognized by a wide range of plants. In the presence of these molecules, termed Nematode-Associated Molecular Patterns (NAMPs), plants activate innate immune responses and display enhanced resistance to a broad spectrum of microbial and nematode pathogens. In addition to pathogen attack, the relocation of various endogenous molecules or parts of molecules, generally to the extracellular milieu, as a result of tissue or cellular damage is perceived as a danger signal, and it leads to the induction of innate immune responses. These relocated endogenous inducers are called Damage-Associated Molecular Patterns (DAMPs). CONCLUSIONS This mini-review is focused on plant DAMPs, including the recently discovered Arabidopsis HMGB3, which is the counterpart of the prototypic animal DAMP HMGB1. The plant DAMPs will be presented in the context of plant MAMPs and NAMPs, as well as animal DAMPs.
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Affiliation(s)
- Hyong Woo Choi
- Boyce Thompson Institute, Cornell University, 533 Tower Road, Ithaca, NY 14853 USA
| | - Daniel F. Klessig
- Boyce Thompson Institute, Cornell University, 533 Tower Road, Ithaca, NY 14853 USA
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89
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Nguyen CT, Tanaka K, Cao Y, Cho SH, Xu D, Stacey G. Computational Analysis of the Ligand Binding Site of the Extracellular ATP Receptor, DORN1. PLoS One 2016; 11:e0161894. [PMID: 27583834 PMCID: PMC5008829 DOI: 10.1371/journal.pone.0161894] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2016] [Accepted: 08/12/2016] [Indexed: 12/29/2022] Open
Abstract
DORN1 (also known as P2K1) is a plant receptor for extracellular ATP, which belongs to a large gene family of legume-type (L-type) lectin receptor kinases. Extracellular ATP binds to DORN1 with strong affinity through its lectin domain, and the binding triggers a variety of intracellular activities in response to biotic and abiotic stresses. However, information on the tertiary structure of the ligand binding site of DORN1is lacking, which hampers efforts to fully elucidate the mechanism of receptor action. Available data of the crystal structures from more than 50 L-type lectins enable us to perform an in silico study of molecular interaction between DORN1 and ATP. In this study, we employed a computational approach to develop a tertiary structure model of the DORN1 lectin domain. A blind docking analysis demonstrated that ATP binds to a cavity made by four loops (defined as loops A B, C and D) of the DORN1 lectin domain with high affinity. In silico target docking of ATP to the DORN1 binding site predicted interaction with 12 residues, located on the four loops, via hydrogen bonds and hydrophobic interactions. The ATP binding pocket is structurally similar in location to the carbohydrate binding pocket of the canonical L-type lectins. However, four of the residues predicted to interact with ATP are not conserved between DORN1 and the other carbohydrate-binding lectins, suggesting that diversifying selection acting on these key residues may have led to the ATP binding activity of DORN1. The in silico model was validated by in vitro ATP binding assays using the purified extracellular lectin domain of wild-type DORN1, as well as mutated DORN1 lacking key ATP binding residues.
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Affiliation(s)
- Cuong The Nguyen
- Division of Plant Sciences and Biochemistry, Christopher S. Bond Life Sciences Center, University of Missouri Columbia, Missouri, 65211, United States of America
| | - Kiwamu Tanaka
- Department of Plant Pathology, Washington State University, Pullman, Washington, 646430, United States of America
| | - Yangrong Cao
- Division of Plant Sciences and Biochemistry, Christopher S. Bond Life Sciences Center, University of Missouri Columbia, Missouri, 65211, United States of America
| | - Sung-Hwan Cho
- Division of Plant Sciences and Biochemistry, Christopher S. Bond Life Sciences Center, University of Missouri Columbia, Missouri, 65211, United States of America
| | - Dong Xu
- Department of Computer Science, Informatics Institute, Christopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, 65211, United States of America
| | - Gary Stacey
- Division of Plant Sciences and Biochemistry, Christopher S. Bond Life Sciences Center, University of Missouri Columbia, Missouri, 65211, United States of America
- * E-mail:
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90
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Liu Y, He C. Regulation of plant reactive oxygen species (ROS) in stress responses: learning from AtRBOHD. PLANT CELL REPORTS 2016; 35:995-1007. [PMID: 26883222 DOI: 10.1007/s00299-016-1950-x] [Citation(s) in RCA: 115] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2015] [Accepted: 02/02/2016] [Indexed: 05/18/2023]
Abstract
Reactive oxygen species (ROS) are constantly produced in plants, as the metabolic by-products or as the signaling components in stress responses. High levels of ROS are harmful to plants. In contrast, ROS play important roles in plant physiology, including abiotic and biotic tolerance, development, and cellular signaling. Therefore, ROS production needs to be tightly regulated to balance their function. Respiratory burst oxidase homologue (RBOH) proteins, also known as plant nicotinamide adenine dinucleotide phosphate oxidases, are well studied enzymatic ROS-generating systems in plants. The regulatory mechanisms of RBOH-dependent ROS production in stress responses have been intensively studied. This has greatly advanced our knowledge of the mechanisms that regulate plant ROS production. This review attempts to integrate the regulatory mechanisms of RBOHD-dependent ROS production by discussing the recent advance. AtRBOHD-dependent ROS production could provide a valuable reference for studying ROS production in plant stress responses.
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Affiliation(s)
- Yukun Liu
- Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, College of Forestry, Southwest Forestry University, 300 Bailong Si, Kunming, 650224, Yunnan, People's Republic of China.
- Key Laboratory for Forest Genetic and Tree Improvement and Propagation in Universities of Yunnan Province, College of Forestry, Southwest Forestry University, 300 Bailong Si, Kunming, 650224, Yunnan, People's Republic of China.
| | - Chengzhong He
- Key Laboratory for Forest Genetic and Tree Improvement and Propagation in Universities of Yunnan Province, College of Forestry, Southwest Forestry University, 300 Bailong Si, Kunming, 650224, Yunnan, People's Republic of China
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91
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Wang X, Zhang MM, Wang YJ, Gao YT, Li R, Wang GF, Li WQ, Liu WT, Chen KM. The plasma membrane NADPH oxidase OsRbohA plays a crucial role in developmental regulation and drought-stress response in rice. PHYSIOLOGIA PLANTARUM 2016; 156:421-43. [PMID: 26400148 DOI: 10.1111/ppl.12389] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2015] [Revised: 07/19/2015] [Accepted: 07/30/2015] [Indexed: 05/20/2023]
Abstract
Plasma membrane NADPH oxidases are major producers of reactive oxygen species (ROS) in plant cells under normal growth and stress conditions. In the present study the total activity of rice NADPH oxidases and the transcription of OsRbohA, which encodes an Oryza sativa plasma membrane NADPH oxidase, were stimulated by drought. OsRbohA was expressed in all tissues examined throughout development. Its mRNA was upregulated by a number of factors, including heat, drought, salt, oxidative stress and methyl jasmonate treatment. Compared with wild-type (WT), the OsRbohA-knockout mutant osrbohA exhibited upregulated expression of other respiratory burst oxidase homolog genes and multiple abnormal agronomic traits, including reduced biomass, low germination rate and decreased pollen viability and seed fertility. However, OsRbohA-overexpressing transgenic plants showed no differences in these traits compared with WT. Although osrbohA leaves and roots produced more ROS than WT, the mutant had lesser intracellular ROS. In contrast, OsRbohA-overexpressing transgenic plants exhibited higher ROS production at the intracellular level and in tissues. Ablation of OsRbohA impaired the tolerance of plants to various water stresses, whereas its overexpression enhanced the tolerance. In addition, a number of genes related to energy supply, substrate transport, stress response and transcriptional regulation were differentially expressed in osrbohA plants even under normal growth conditions, suggesting that OsRbohA has fundamental and broad functions in rice. These results indicate that OsRbohA-mediated processes are governed by complex signaling pathways that function during the developmental regulation and drought-stress response in rice.
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Affiliation(s)
- Xiang Wang
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Mao-Mao Zhang
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Ya-Jing Wang
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Yin-Tao Gao
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Ri Li
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Gang-Feng Wang
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Wen-Qiang Li
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Wen-Ting Liu
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Kun-Ming Chen
- State Key Laboratory of Crop Stress Biology in Arid Area/College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
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92
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Chang YL, Li WY, Miao H, Yang SQ, Li R, Wang X, Li WQ, Chen KM. Comprehensive Genomic Analysis and Expression Profiling of the NOX Gene Families under Abiotic Stresses and Hormones in Plants. Genome Biol Evol 2016; 8:791-810. [PMID: 26907500 PMCID: PMC4824067 DOI: 10.1093/gbe/evw035] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023] Open
Abstract
Plasma membrane NADPH oxidases (NOXs) are key producers of reactive oxygen species under both normal and stress conditions in plants and they form functional subfamilies. Studies of these subfamilies indicated that they show considerable evolutionary selection. We performed a comparative genomic analysis that identified 50 ferric reduction oxidases (FRO) and 77 NOX gene homologs from 20 species representing the eight major plant lineages within the supergroup Plantae: glaucophytes, rhodophytes, chlorophytes, bryophytes, lycophytes, gymnosperms, monocots, and eudicots. Phylogenetic and structural analysis classified these FRO and NOX genes into four well-conserved groups represented as NOX, FRO I, FRO II, and FRO III. Further analysis of NOXs of phylogenetic and exon/intron structures showed that single intron loss and gain had occurred, yielding the diversified gene structures during the evolution of NOXs family genes and which were classified into four conserved subfamilies which are represented as Sub.I, Sub.II, Sub.III, and Sub.IV. Additionally, both available global microarray data analysis and quantitative real-time PCR experiments revealed that the NOX genes in Arabidopsis and rice (Oryza sativa) have different expression patterns in different developmental stages, various abiotic stresses and hormone treatments. Finally, coexpression network analysis of NOX genes in Arabidopsis and rice revealed that NOXs have significantly correlated expression profiles with genes which are involved in plants metabolic and resistance progresses. All these results suggest that NOX family underscores the functional diversity and divergence in plants. This finding will facilitate further studies of the NOX family and provide valuable information for functional validation of this family in plants.
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Affiliation(s)
- Yan-Li Chang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, P. R. China
| | - Wen-Yan Li
- Guangdong Academy of Agricultural Sciences, Argo-Biological Gene Research Center, Guangzhou, Guangdong, P. R. China
| | - Hai Miao
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, P. R. China
| | - Shuai-Qi Yang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, P. R. China
| | - Ri Li
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, P. R. China
| | - Xiang Wang
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, P. R. China
| | - Wen-Qiang Li
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, P. R. China
| | - Kun-Ming Chen
- State Key Laboratory of Crop Stress Biology in Arid Areas, College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, P. R. China
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93
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Guiguet A, Dubreuil G, Harris MO, Appel HM, Schultz JC, Pereira MH, Giron D. Shared weapons of blood- and plant-feeding insects: Surprising commonalities for manipulating hosts. JOURNAL OF INSECT PHYSIOLOGY 2016; 84:4-21. [PMID: 26705897 DOI: 10.1016/j.jinsphys.2015.12.006] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2015] [Revised: 12/14/2015] [Accepted: 12/15/2015] [Indexed: 05/04/2023]
Abstract
Insects that reprogram host plants during colonization remind us that the insect side of plant-insect story is just as interesting as the plant side. Insect effectors secreted by the salivary glands play an important role in plant reprogramming. Recent discoveries point to large numbers of salivary effectors being produced by a single herbivore species. Since genetic and functional characterization of effectors is an arduous task, narrowing the field of candidates is useful. We present ideas about types and functions of effectors from research on blood-feeding parasites and their mammalian hosts. Because of their importance for human health, blood-feeding parasites have more tools from genomics and other - omics than plant-feeding parasites. Four themes have emerged: (1) mechanical damage resulting from attack by blood-feeding parasites triggers "early danger signals" in mammalian hosts, which are mediated by eATP, calcium, and hydrogen peroxide, (2) mammalian hosts need to modulate their immune responses to the three "early danger signals" and use apyrases, calreticulins, and peroxiredoxins, respectively, to achieve this, (3) blood-feeding parasites, like their mammalian hosts, rely on some of the same "early danger signals" and modulate their immune responses using the same proteins, and (4) blood-feeding parasites deploy apyrases, calreticulins, and peroxiredoxins in their saliva to manipulate the "danger signals" of their mammalian hosts. We review emerging evidence that plant-feeding insects also interfere with "early danger signals" of their hosts by deploying apyrases, calreticulins and peroxiredoxins in saliva. Given emerging links between these molecules, and plant growth and defense, we propose that these effectors interfere with phytohormone signaling, and therefore have a special importance for gall-inducing and leaf-mining insects, which manipulate host-plants to create better food and shelter.
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Affiliation(s)
- Antoine Guiguet
- Institut de Recherche sur la Biologie de l'Insecte, UMR 7261 CNRS - Université François-Rabelais de Tours, 37200 Tours, France; Département de Biologie, École Normale Supérieure de Lyon, 69007 Lyon, France
| | - Géraldine Dubreuil
- Institut de Recherche sur la Biologie de l'Insecte, UMR 7261 CNRS - Université François-Rabelais de Tours, 37200 Tours, France
| | - Marion O Harris
- Department of Entomology, North Dakota State University, Fargo, ND 58105, USA; Le Studium Loire Valley Institute for Advanced Studies, 45000 Orléans, France
| | - Heidi M Appel
- Life Science Center, University of Missouri, Columbia, MO 65211, USA
| | - Jack C Schultz
- Life Science Center, University of Missouri, Columbia, MO 65211, USA
| | - Marcos H Pereira
- Le Studium Loire Valley Institute for Advanced Studies, 45000 Orléans, France; Laboratório de Fisiologia de Insectos Hematófagos, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - David Giron
- Institut de Recherche sur la Biologie de l'Insecte, UMR 7261 CNRS - Université François-Rabelais de Tours, 37200 Tours, France.
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94
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Jiménez-Quesada MJ, Traverso JÁ, Alché JDD. NADPH Oxidase-Dependent Superoxide Production in Plant Reproductive Tissues. FRONTIERS IN PLANT SCIENCE 2016; 7:359. [PMID: 27066025 PMCID: PMC4815025 DOI: 10.3389/fpls.2016.00359] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2015] [Accepted: 03/07/2016] [Indexed: 05/02/2023]
Abstract
In the life cycle of a flowering plant, the male gametophyte (pollen grain) produced in the anther reaches the stigmatic surface and initiates the pollen-pistil interaction, an important step in plant reproduction, which ultimately leads to the delivery of two sperm cells to the female gametophyte (embryo sac) inside the ovule. The pollen tube undergoes a strictly apical expansion characterized by a high growth rate, whose targeting should be tightly regulated. A continuous exchange of signals therefore takes place between the haploid pollen and diploid tissue of the pistil until fertilization. In compatible interactions, theses processes result in double fertilization to form a zygote (2n) and the triploid endosperm. Among the large number of signaling mechanisms involved, the redox network appears to be particularly important. Respiratory burst oxidase homologs (Rbohs) are superoxide-producing enzymes involved in a broad range of processes in plant physiology. In this study, we review the latest findings on understanding Rboh activity in sexual plant reproduction, with a particular focus on the male gametophyte from the anther development stages to the crowning point of fertilization. Rboh isoforms have been identified in both the male and female gametophyte and have proven to be tightly regulated. Their role at crucial points such as proper growth of pollen tube, self-incompatibility response and eventual fertilization is discussed.
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Affiliation(s)
- María J. Jiménez-Quesada
- Plant Reproductive Biology Laboratory, Department of Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, Spanish National Research Council (CSIC)Granada, Spain
| | - José Á. Traverso
- Department of Cell Biology, Faculty of Sciences, University of GranadaGranada, Spain
| | - Juan de Dios Alché
- Plant Reproductive Biology Laboratory, Department of Biochemistry, Cell and Molecular Biology of Plants, Estación Experimental del Zaidín, Spanish National Research Council (CSIC)Granada, Spain
- *Correspondence: Juan de Dios Alché,
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95
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Shabala S, Wu H, Bose J. Salt stress sensing and early signalling events in plant roots: Current knowledge and hypothesis. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2015; 241:109-19. [PMID: 26706063 DOI: 10.1016/j.plantsci.2015.10.003] [Citation(s) in RCA: 107] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/05/2015] [Revised: 10/05/2015] [Accepted: 10/06/2015] [Indexed: 05/20/2023]
Abstract
Soil salinity is a major environmental constraint to crop production. While the molecular identity and functional expression of Na(+) transport systems mediating Na(+) exclusion from the cytosol has been studied in detail, far less is known about the mechanisms by which plants sense high Na(+) levels in the soil and the rapid signalling events that optimise plant performance under saline conditions. This review aims to fill this gap. We first discuss the nature of putative salt stress sensors, candidates which include Na(+) transport systems, mechanosensory proteins, proteins with regulatory Na(+) binding sites, sensing mediated by cyclic nucleotide-gated channels, purine receptors, annexin and voltage gating. We suggest that several transport proteins may be clustered together to form a microdomain in a lipid raft, allowing rapid changes in the activity of an individual protein to be translated into stress-induced Ca(2+) and H2O2 signatures. The pathways of stress signalling to downstream targets are discussed, and the kinetics and specificity of salt stress signalling between glycophytes and halophytes is compared. We argue that these sensing mechanisms operate in parallel, providing plants with a robust system for decoding information about the specific nature and severity of the imposed salt stress.
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Affiliation(s)
- Sergey Shabala
- School of Land and Food, University of Tasmania, Private Bag 54, Hobart, Tasmania 7001, Australia.
| | - Honghong Wu
- School of Land and Food, University of Tasmania, Private Bag 54, Hobart, Tasmania 7001, Australia
| | - Jayakumar Bose
- School of Land and Food, University of Tasmania, Private Bag 54, Hobart, Tasmania 7001, Australia; ARC Centre of Excellence in Plant Energy Biology and School of Agriculture, Food and Wine, University of Adelaide, PMB 1, Glen Osmond, SA 5064, Australia
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96
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Becerra-Moreno A, Redondo-Gil M, Benavides J, Nair V, Cisneros-Zevallos L, Jacobo-Velázquez DA. Combined effect of water loss and wounding stress on gene activation of metabolic pathways associated with phenolic biosynthesis in carrot. FRONTIERS IN PLANT SCIENCE 2015; 6:837. [PMID: 26528305 PMCID: PMC4606068 DOI: 10.3389/fpls.2015.00837] [Citation(s) in RCA: 48] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2015] [Accepted: 09/23/2015] [Indexed: 05/22/2023]
Abstract
The application of postharvest abiotic stresses is an effective strategy to activate the primary and secondary metabolism of plants inducing the accumulation of antioxidant phenolic compounds. In the present study, the effect of water stress applied alone and in combination with wounding stress on the activation of primary (shikimic acid) and secondary (phenylpropanoid) metabolic pathways related with the accumulation of phenolic compound in plants was evaluated. Carrot (Daucus carota) was used as model system for this study, and the effect of abiotic stresses was evaluated at the gene expression level and on the accumulation of metabolites. As control of the study, whole carrots were stored under the same conditions. Results demonstrated that water stress activated the primary and secondary metabolism of carrots, favoring the lignification process. Likewise, wounding stress induced higher activation of the primary and secondary metabolism of carrots as compared to water stress alone, leading to higher accumulation of shikimic acid, phenolic compounds, and lignin. Additional water stress applied on wounded carrots exerted a synergistic effect on the wound-response at the gene expression level. For instance, when wounded carrots were treated with water stress, the tissue showed 20- and 14-fold increases in the relative expression of 3-deoxy-D-arabino-heptulosanate synthase and phenylalanine ammonia-lyase genes, respectively. However, since lignification was increased, lower accumulation of phenolic compounds was detected. Indicatively, at 48 h of storage, wounded carrots treated with water stress showed ~31% lower levels of phenolic compounds and ~23% higher lignin content as compared with wounded controls. In the present study, it was demonstrated that water stress is one of the pivotal mechanism of the wound-response in carrot. Results allowed the elucidation of strategies to induce the accumulation of specific primary or secondary metabolites when plants are treated with water stress alone or when additional water stress is applied on wounded tissue. If the accumulation of a specific primary or secondary metabolite were desirable, it would be recommended to apply both stresses to accelerate their biosynthesis. However, strategies such as the use of enzymatic inhibitors to block the carbon flux and enhance the accumulation of specific compounds should be designed.
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Affiliation(s)
- Alejandro Becerra-Moreno
- Department of Biotechnology and Food Engineering, Centro de Biotecnologia-FEMSA, School of Engineering and Sciences, Tecnologico de Monterrey-Campus MonterreyMonterrey, Mexico
| | - Mónica Redondo-Gil
- Department of Biotechnology and Food Engineering, Centro de Biotecnologia-FEMSA, School of Engineering and Sciences, Tecnologico de Monterrey-Campus MonterreyMonterrey, Mexico
| | - Jorge Benavides
- Department of Biotechnology and Food Engineering, Centro de Biotecnologia-FEMSA, School of Engineering and Sciences, Tecnologico de Monterrey-Campus MonterreyMonterrey, Mexico
| | - Vimal Nair
- Department of Horticultural Sciences, Texas A&M UniversityCollege Station, TX, USA
| | | | - Daniel A. Jacobo-Velázquez
- Department of Biotechnology and Food Engineering, Centro de Biotecnologia-FEMSA, School of Engineering and Sciences, Tecnologico de Monterrey-Campus MonterreyMonterrey, Mexico
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97
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Biochemical characterization of Arabidopsis APYRASE family reveals their roles in regulating endomembrane NDP/NMP homoeostasis. Biochem J 2015; 472:43-54. [PMID: 26338998 DOI: 10.1042/bj20150235] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2015] [Accepted: 09/03/2015] [Indexed: 12/27/2022]
Abstract
Plant apyrases are nucleoside triphosphate (NTP) diphosphohydrolases (NTPDases) and have been implicated in an array of functions within the plant including the regulation of extracellular ATP. Arabidopsis encodes a family of seven membrane bound apyrases (AtAPY1-7) that comprise three distinct clades, all of which contain the five conserved apyrase domains. With the exception of AtAPY1 and AtAPY2, the biochemical and the sub-cellular characterization of the other members are currently unavailable. In this research, we have shown all seven Arabidopsis apyrases localize to internal membranes comprising the cis-Golgi, endoplasmic reticulum (ER) and endosome, indicating an endo-apyrase classification for the entire family. In addition, all members, with the exception of AtAPY7, can function as endo-apyrases by complementing a yeast double mutant (Δynd1Δgda1) which lacks apyrase activity. Interestingly, complementation of the mutant yeast using well characterized human apyrases could only be accomplished by using a functional ER endo-apyrase (NTPDase6), but not the ecto-apyrase (NTPDase1). Furthermore, the substrate specificity analysis for the Arabidopsis apyrases AtAPY1-6 indicated that each member has a distinct set of preferred substrates covering various NDPs (nucleoside diphosphates) and NTPs. Combining the biochemical analysis and sub-cellular localization of the Arabidopsis apyrases family, the data suggest their possible roles in regulating endomembrane NDP/NMP (nucleoside monophosphate) homoeostasis.
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98
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Polle A, Chen S. On the salty side of life: molecular, physiological and anatomical adaptation and acclimation of trees to extreme habitats. PLANT, CELL & ENVIRONMENT 2015; 38:1794-816. [PMID: 25159181 DOI: 10.1111/pce.12440] [Citation(s) in RCA: 66] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2014] [Revised: 08/11/2014] [Accepted: 08/17/2014] [Indexed: 05/04/2023]
Abstract
Saline and sodic soils that cannot be used for agriculture occur worldwide. Cultivating stress-tolerant trees to obtain biomass from salinized areas has been suggested. Various tree species of economic importance for fruit, fibre and timber production exhibit high salinity tolerance. Little is known about the mechanisms enabling tree crops to cope with high salinity for extended periods. Here, the molecular, physiological and anatomical adjustments underlying salt tolerance in glycophytic and halophytic model tree species, such as Populus euphratica in terrestrial habitats, and mangrove species along coastlines are reviewed. Key mechanisms that have been identified as mediating salt tolerance are discussed at scales from the genetic to the morphological level, including leaf succulence and structural adjustments of wood anatomy. The genetic and transcriptomic bases for physiological salt acclimation are salt sensing and signalling networks that activate target genes; the target genes keep reactive oxygen species under control, maintain the ion balance and restore water status. Evolutionary adaptation includes gene duplication in these pathways. Strategies for and limitations to tree improvement, particularly transgenic approaches for increasing salt tolerance by transforming trees with single and multiple candidate genes, are discussed.
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Affiliation(s)
- Andrea Polle
- Forstbotanik und Baumphysiologie, Büsgen-Institut, Georg-August Universität Göttingen, Göttingen, 37077, Germany
| | - Shaoliang Chen
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing, 100083, China
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99
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Deng S, Sun J, Zhao R, Ding M, Zhang Y, Sun Y, Wang W, Tan Y, Liu D, Ma X, Hou P, Wang M, Lu C, Shen X, Chen S. Populus euphratica APYRASE2 Enhances Cold Tolerance by Modulating Vesicular Trafficking and Extracellular ATP in Arabidopsis Plants. PLANT PHYSIOLOGY 2015; 169:530-548. [PMID: 26224801 PMCID: PMC4577398 DOI: 10.1104/pp.15.00581] [Citation(s) in RCA: 61] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2015] [Accepted: 07/28/2015] [Indexed: 05/20/2023]
Abstract
Apyrase and extracellular ATP play crucial roles in mediating plant growth and defense responses. In the cold-tolerant poplar, Populus euphratica, low temperatures up-regulate APYRASE2 (PeAPY2) expression in callus cells. We investigated the biochemical characteristics of PeAPY2 and its role in cold tolerance. We found that PeAPY2 predominantly localized to the plasma membrane, but punctate signals also appeared in the endoplasmic reticulum and Golgi apparatus. PeAPY2 exhibited broad substrate specificity, but it most efficiently hydrolyzed purine nucleotides, particularly ATP. PeAPY2 preferred Mg(2+) as a cofactor, and it was insensitive to various, specific ATPase inhibitors. When PeAPY2 was ectopically expressed in Arabidopsis (Arabidopsis thaliana), cold tolerance was enhanced, based on root growth measurements and survival rates. Moreover, under cold stress, PeAPY2-transgenic plants maintained plasma membrane integrity and showed reduced cold-elicited electrolyte leakage compared with wild-type plants. These responses probably resulted from efficient plasma membrane repair via vesicular trafficking. Indeed, transgenic plants showed accelerated endocytosis and exocytosis during cold stress and recovery. We found that low doses of extracellular ATP accelerated vesicular trafficking, but high extracellular ATP inhibited trafficking and reduced cell viability. Cold stress caused significant increases in root medium extracellular ATP. However, under these conditions, PeAPY2-transgenic lines showed greater control of extracellular ATP levels than wild-type plants. We conclude that Arabidopsis plants that overexpressed PeAPY2 could increase membrane repair by accelerating vesicular trafficking and hydrolyzing extracellular ATP to avoid excessive, cold-elicited ATP accumulation in the root medium and, thus, reduced ATP-induced inhibition of vesicular trafficking.
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Affiliation(s)
- Shurong Deng
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Jian Sun
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Rui Zhao
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Mingquan Ding
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Yinan Zhang
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Yuanling Sun
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Wei Wang
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Yeqing Tan
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Dandan Liu
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Xujun Ma
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Peichen Hou
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Meijuan Wang
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Cunfu Lu
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Xin Shen
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
| | - Shaoliang Chen
- College of Biological Sciences and Technology, Beijing Forestry University, Beijing 100083, People's Republic of China (S.D., R.Z., Y.Z., Y.S., W.W., Y.T., D.L., X.M., M.W., C.L., X.S., S.C.);College of Life Science, Jiangsu Normal University, Xuzhou 221116, People's Republic of China (J.S.);College of Agricultural and Food Science, Zhejiang Agricultural and Forestry University, Hangzhou 311300, People's Republic of China (M.D.); andNational Engineering Research Center for Information Technology in Agriculture, Beijing 100097, People's Republic of China (P.H.)
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100
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Feng H, Guan D, Bai J, Sun K, Jia L. Extracellular ATP: a potential regulator of plant cell death. MOLECULAR PLANT PATHOLOGY 2015; 16:633-9. [PMID: 25395168 PMCID: PMC6638322 DOI: 10.1111/mpp.12219] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Adenosine 5'-triphosphate (ATP) has been regarded as an intracellular energy currency molecule for many years. In recent decades, it has been determined that ATP is released into the extracellular milieu by animal, plant and microbial cells. In animal cells, this extracellular ATP (eATP) functions as a signalling compound to mediate many cellular processes through its interaction with membrane-associated receptor proteins. It has also been reported that eATP is a signalling molecule required for the regulation of plant growth, development and responses to environmental stimuli. Recently, the first plant receptor for eATP was identified in Arabidopsis thaliana. Interestingly, some studies have shown that eATP is of particular importance in the control of plant cell death. In this review article, we summarize and discuss the theoretical and experimental advances that have been made with regard to the roles and mechanisms of eATP in plant cell death. We also make an attempt to address some speculative aspects to help develop and expand future research in this area.
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Affiliation(s)
- Hanqing Feng
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China
| | - Dongdong Guan
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China
| | - Jingyue Bai
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China
| | - Kun Sun
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China
| | - Lingyun Jia
- College of Life Science, Northwest Normal University, Lanzhou, 730070, China
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