51
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Dnyaneshwar Veer S, Chandrakant Wakchaure V, Asokan K, Dixit R, Goswami T, Saha R, Gonnade R, Ghosh HN, Santhosh Babu S. Oligothiophene-Ring-Strapped Perylene Bisimides: Functionalizable Coaxial Donor-Acceptor Macrocycles. Angew Chem Int Ed Engl 2023; 62:e202212934. [PMID: 36266975 DOI: 10.1002/anie.202212934] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Revised: 10/20/2022] [Accepted: 10/20/2022] [Indexed: 12/14/2022]
Abstract
Aesthetic designs from nature enable new knowledge to be gained and, at the same time, inspire scientific models. In this context, multicomponent macrocycles embody the advantage of precisely positioning the structural units to achieve efficient communication between them. However, the construction of a functionalizable macrocycle for ultrafast charge separation and stabilization has not been attempted. Herein, we report the synthesis, crystal structure, and transient absorption of a new functionalizable macrocycle consisting of an oligothiophene-ring-strapped perylene bisimide. Transient absorption results point to a sequential improvement in charge separation and stabilization from the macrocycle to the corresponding linear dimer and 2D polymer due to the unique design. Our macrocycle design with a supportive spatial arrangement of the donor and acceptor units will inspire the development of more complex synthetic systems with exciting electron-transfer and charge-separation features.
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Affiliation(s)
- Sairam Dnyaneshwar Veer
- Organic Chemistry Division, National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune, 411 008, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002, India
| | - Vivek Chandrakant Wakchaure
- Organic Chemistry Division, National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune, 411 008, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002, India
| | - Kiran Asokan
- Organic Chemistry Division, National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune, 411 008, India
| | - Ruchi Dixit
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002, India.,Physical and Materials Chemistry Division, National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune, 411 008, India
| | - Tanmay Goswami
- Institute of Nanoscience and Nanotechnology (INST), Sector 81, Mohali, 411008, Punjab, India
| | - Ramchandra Saha
- Institute of Nanoscience and Nanotechnology (INST), Sector 81, Mohali, 411008, Punjab, India
| | - Rajesh Gonnade
- Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002, India.,Physical and Materials Chemistry Division, National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune, 411 008, India
| | - Hirendra N Ghosh
- Institute of Nanoscience and Nanotechnology (INST), Sector 81, Mohali, 411008, Punjab, India.,Radiation and Photochemistry Division, Bhabha Atomic Research Centre, Mumbai, 400085, India
| | - Sukumaran Santhosh Babu
- Organic Chemistry Division, National Chemical Laboratory (CSIR-NCL), Dr. Homi Bhabha Road, Pune, 411 008, India.,Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201 002, India
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52
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Schneider H, Lai B, Krömer J. Utilizing Cyanobacteria in Biophotovoltaics: An Emerging Field in Bioelectrochemistry. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2023; 183:281-302. [PMID: 36441187 DOI: 10.1007/10_2022_212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Anthropogenic global warming is driven by the increasing energy demand and the still dominant use of fossil energy carriers to meet these needs. New carbon-neutral energy sources are urgently needed to solve this problem. Biophotovoltaics, a member of the so-called bioelectrochemical systems family, will provide an important piece of the energy puzzle. It aims to harvest the electrons from sunlight-driven water splitting using the natural oxygenic photosystem (e.g., of cyanobacteria) and utilize them in the form of, e.g., electricity or hydrogen. Several key aspects of biophotovoltaics have been intensively studied in recent years like physicochemical properties of electrodes or efficient wiring of microorganisms to electrodes. Yet, the exact mechanisms of electron transfer between the biocatalyst and the electrode remain unresolved today. Most research is conducted on microscale reactors generating small currents over short time-scales, but multiple experiments have shown biophotovoltaics great potential with lab-scale reactors producing currents over weeks to months. Although biophotovoltaics is still in its infancy with many open research questions to be addressed, new promising results from various labs around the world suggest an important opportunity for biophotovoltaics in the decades to come. In this chapter, we will introduce the concept of biophotovoltaics, summarize its recent key progress, and finally critically discuss the potentials and challenges for future rational development of biophotovoltaics.
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Affiliation(s)
- Hans Schneider
- Department of Solar Materials, Helmholtz Center for Environmental Research, Leipzig, Germany.
| | - Bin Lai
- Department of Solar Materials, Helmholtz Center for Environmental Research, Leipzig, Germany
| | - Jens Krömer
- Department of Solar Materials, Helmholtz Center for Environmental Research, Leipzig, Germany
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53
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Siegbahn PEM. Computational modeling of redox enzymes. FEBS Lett 2023; 597:38-44. [PMID: 36254111 DOI: 10.1002/1873-3468.14512] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2022] [Revised: 09/26/2022] [Accepted: 09/29/2022] [Indexed: 01/14/2023]
Abstract
A computational methodology is briefly described, which appears to be able to accurately describe the mechanisms of redox active enzymes. The method is built on hybrid density functional theory where the inclusion of a fraction of exact exchange is critical. Two examples of where the methodology has been applied are described. The first example is the mechanism for water oxidation in photosystem II, and the second one is the mechanism for N2 activation by nitrogenase. The mechanism for PSII has obtained very strong support from subsequent experiments. For nitrogenase, the calculations suggest that there should be an activation process prior to catalysis, which is still strongly debated.
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Affiliation(s)
- Per E M Siegbahn
- Department of Organic Chemistry, Arrhenius Laboratory, Stockholm University, Sweden
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54
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Amela-Cortes M, Wilmet M, Le Person S, Khlifi S, Lebastard C, Molard Y, Cordier S. From Solid-State Cluster Compounds to Functional PMMA-Based Composites with UV and NIR Blocking Properties, and Tuned Hues. NANOMATERIALS (BASEL, SWITZERLAND) 2022; 13:144. [PMID: 36616054 PMCID: PMC9824331 DOI: 10.3390/nano13010144] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/25/2022] [Revised: 12/20/2022] [Accepted: 12/23/2022] [Indexed: 06/17/2023]
Abstract
New nanocomposite materials with UV-NIR blocking properties and hues ranging from green to brown were prepared by integrating inorganic tantalum octahedral cluster building blocks prepared via solid-state chemistry in a PMMA matrix. After the synthesis by the solid-state chemical reaction of the K4[{Ta6Bri12}Bra6] ternary halide, built-up from [{Ta6Bri12}Bra6]4- anionic building blocks, and potassium cations, the potassium cations were replaced by functional organic cations (Kat+) bearing a methacrylate function. The resulting intermediate, (Kat)2[{Ta6Bri12}Bra6], was then incorporated homogeneously by copolymerization with MMA into transparent PMMA matrices to form a brown transparent hybrid composite Ta@PMMAbrown. The color of the composites was tuned by controlling the charge and consequently the oxidation state of the cluster building block. Ta@PMMAgreen was obtained through the two-electron reduction of the [{Ta6Bri12}Bra6]2- building blocks from Ta@PMMAbrown in solution. Indeed, the control of the oxidation state of the Ta6 cluster inorganic building blocks occurred inside the copolymer, which not only allowed the tuning of the optical properties of the composite in the visible region but also allowed the tuning of its UV and NIR blocking properties.
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Affiliation(s)
| | - Maxence Wilmet
- CNRS-Saint Gobain-NIMS, IRL3629, Laboratory for Innovative Key Materials ans Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba 305-0044, Japan
| | | | - Soumaya Khlifi
- Univ. Rennes, CNRS, ISCR, UMR6226, F-35000 Rennes, France
| | - Clément Lebastard
- Univ. Rennes, CNRS, ISCR, UMR6226, F-35000 Rennes, France
- CNRS-Saint Gobain-NIMS, IRL3629, Laboratory for Innovative Key Materials ans Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba 305-0044, Japan
| | - Yann Molard
- Univ. Rennes, CNRS, ISCR, UMR6226, F-35000 Rennes, France
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55
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Fan S, Takada T, Maruyama A, Fujitsuka M, Kawai K. Large Heterogeneity Observed in Single Molecule Measurements of Intramolecular Electron Transfer Rates through DNA. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2022. [DOI: 10.1246/bcsj.20220220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Shuya Fan
- SANKEN (The Institute of Scientific and Industrial Research), Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka 567-0047, Japan
| | - Tadao Takada
- Department of Applied Chemistry, Graduate School of Engineering, University of Hyogo, 2167 Shosha, Himeji, Hyogo 671-2280, Japan
| | - Atsushi Maruyama
- Department of Life Science and Technology, Tokyo Institute of Technology, 4259 B-57 Nagatsuta, Midori-ku, Yokohama, Kanagawa 226-8501, Japan
| | - Mamoru Fujitsuka
- SANKEN (The Institute of Scientific and Industrial Research), Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka 567-0047, Japan
| | - Kiyohiko Kawai
- SANKEN (The Institute of Scientific and Industrial Research), Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka 567-0047, Japan
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56
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Hong YH, Lee YM, Nam W, Fukuzumi S. Reaction Intermediates in Artificial Photosynthesis with Molecular Catalysts. ACS Catal 2022. [DOI: 10.1021/acscatal.2c05033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Affiliation(s)
- Young Hyun Hong
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul03760, Korea
| | - Yong-Min Lee
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul03760, Korea
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul03760, Korea
| | - Shunichi Fukuzumi
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul03760, Korea
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57
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Tang B, Yang G, Du J, Xie L, Wang J, Pan L, Luo Y, Shan Q, Zou X, Xiong C, Liu F. Analysis of the response regulatory network of pepper genes under hydrogen peroxide stress. FRONTIERS IN PLANT SCIENCE 2022; 13:1018991. [PMID: 36570911 PMCID: PMC9772053 DOI: 10.3389/fpls.2022.1018991] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/14/2022] [Accepted: 11/15/2022] [Indexed: 06/17/2023]
Abstract
Hydrogen peroxide (H2O2) is a regulatory component related to plant signal transduction. To better understand the genome-wide gene expression response to H2O2 stress in pepper plants, a regulatory network of H2O2 stress-gene expression in pepper leaves and roots was constructed in the present study. We collected the normal tissues of leaves and roots of pepper plants after 40 days of H2O2 treatment and obtained the RNA-seq data of leaves and roots exposed to H2O2 for 0.5-24 h. By comparing the gene responses of pepper leaves and roots exposed to H2O2 stress for different time periods, we found that the response in roots reached the peak at 3 h, whereas the response in leaves reached the peak at 24 h after treatment, and the response degree in the roots was higher than that in the leaves. We used all datasets for K-means analysis and network analysis identified the clusters related to stress response and related genes. In addition, CaEBS1, CaRAP2, and CabHLH029 were identified through a co-expression analysis and were found to be strongly related to several reactive oxygen species-scavenging enzyme genes; their homologous genes in Arabidopsis showed important functions in response to hypoxia or iron uptake. This study provides a theoretical basis for determining the dynamic response process of pepper plants to H2O2 stress in leaves and roots, as well as for determining the critical time and the molecular mechanism of H2O2 stress response in leaves and roots. The candidate transcription factors identified in this study can be used as a reference for further experimental verification.
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Affiliation(s)
- Bingqian Tang
- College of Horticulture, Hunan Agricultural University, Changsha, Hunan, China
- Longping Branch, Graduate School of Hunan University, Changsha, Hunan, China
- Engineering Research Center for Germplasm Innovation and New Varieties Breeding of Horticultural Crops, Key Laboratory for Vegetable Biology of Hunan Province, College of Horticulture, Hunan Agricultural University, Changsha, China
| | - Guangbin Yang
- Longping Branch, Graduate School of Hunan University, Changsha, Hunan, China
| | - Juan Du
- Longping Branch, Graduate School of Hunan University, Changsha, Hunan, China
| | - Lingling Xie
- Engineering Research Center for Germplasm Innovation and New Varieties Breeding of Horticultural Crops, Key Laboratory for Vegetable Biology of Hunan Province, College of Horticulture, Hunan Agricultural University, Changsha, China
| | - Jin Wang
- College of Horticulture, Hunan Agricultural University, Changsha, Hunan, China
| | - Luzhao Pan
- College of Horticulture, Hunan Agricultural University, Changsha, Hunan, China
| | - Yin Luo
- Longping Branch, Graduate School of Hunan University, Changsha, Hunan, China
| | - Qingyun Shan
- College of Horticulture, Hunan Agricultural University, Changsha, Hunan, China
| | - Xuexiao Zou
- College of Horticulture, Hunan Agricultural University, Changsha, Hunan, China
- Longping Branch, Graduate School of Hunan University, Changsha, Hunan, China
- Engineering Research Center for Germplasm Innovation and New Varieties Breeding of Horticultural Crops, Key Laboratory for Vegetable Biology of Hunan Province, College of Horticulture, Hunan Agricultural University, Changsha, China
- Laboratory of Lingnan Modern Agriculture, Guangzhou, Guangdong, China
| | - Cheng Xiong
- College of Horticulture, Hunan Agricultural University, Changsha, Hunan, China
- Engineering Research Center for Germplasm Innovation and New Varieties Breeding of Horticultural Crops, Key Laboratory for Vegetable Biology of Hunan Province, College of Horticulture, Hunan Agricultural University, Changsha, China
| | - Feng Liu
- College of Horticulture, Hunan Agricultural University, Changsha, Hunan, China
- Longping Branch, Graduate School of Hunan University, Changsha, Hunan, China
- Engineering Research Center for Germplasm Innovation and New Varieties Breeding of Horticultural Crops, Key Laboratory for Vegetable Biology of Hunan Province, College of Horticulture, Hunan Agricultural University, Changsha, China
- Laboratory of Lingnan Modern Agriculture, Guangzhou, Guangdong, China
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58
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Sirohiwal A, Pantazis DA. Functional Water Networks in Fully Hydrated Photosystem II. J Am Chem Soc 2022; 144:22035-22050. [PMID: 36413491 PMCID: PMC9732884 DOI: 10.1021/jacs.2c09121] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Water channels and networks within photosystem II (PSII) of oxygenic photosynthesis are critical for enzyme structure and function. They control substrate delivery to the oxygen-evolving center and mediate proton transfer at both the oxidative and reductive endpoints. Current views on PSII hydration are derived from protein crystallography, but structural information may be compromised by sample dehydration and technical limitations. Here, we simulate the physiological hydration structure of a cyanobacterial PSII model following a thorough hydration procedure and large-scale unconstrained all-atom molecular dynamics enabled by massively parallel simulations. We show that crystallographic models of PSII are moderately to severely dehydrated and that this problem is particularly acute for models derived from X-ray free electron laser (XFEL) serial femtosecond crystallography. We present a fully hydrated representation of cyanobacterial PSII and map all water channels, both static and dynamic, associated with the electron donor and acceptor sides. Among them, we describe a series of transient channels and the attendant conformational gating role of protein components. On the acceptor side, we characterize a channel system that is absent from existing crystallographic models but is likely functionally important for the reduction of the terminal electron acceptor plastoquinone QB. The results of the present work build a foundation for properly (re)evaluating crystallographic models and for eliciting new insights into PSII structure and function.
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59
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Najafpour MM, Shen JR, Allakhverdiev SI. Natural and artificial photosynthesis: fundamentals, progress, and challenges. PHOTOSYNTHESIS RESEARCH 2022; 154:229-231. [PMID: 36376763 DOI: 10.1007/s11120-022-00982-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Affiliation(s)
- Mohammad Mahdi Najafpour
- Department of Chemistry, Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan, 45137-66731, Iran.
- Center of Climate Change and Global Warming, Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan, 45137-66731, Iran.
- Research Center for Basic Sciences & Modern Technologies (RBST), Institute for Advanced Studies in Basic Sciences (IASBS), Zanjan, 45137-66731, Iran.
| | - Jian-Ren Shen
- Research Institute for Interdisciplinary Science and Graduate School of Natural Science and Technology, Okayama University, Okayama, 700-8530, Japan.
| | - Suleyman I Allakhverdiev
- K. A. Timiryazev Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya Street 35, Moscow, 127276, Russia.
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60
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Goswami S, Singha S, Khanra B, Chakraborty P, Saha R, Benmansour S, Kumar Dey S, Gómez García CJ, Kumar S. Double dicyanamide decorated double phenoxide bridged MnIII dimer with Single–Molecule Magnetic behaviour and bio-catalytic activity. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2022.121370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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61
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Yamaguchi K, Miyagawa K, Shoji M, Isobe H, Kawakami T. Elucidation of a multiple S3 intermediates model for water oxidation in the oxygen evolving complex of photosystem II. Calcium-assisted concerted O O bond formation. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.140042] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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62
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Yamaguchi K, Shoji M, Isobe H, Kawakami T, Miyagawa K, Suga M, Akita F, Shen JR. Geometric, electronic and spin structures of the CaMn4O5 catalyst for water oxidation in oxygen-evolving photosystem II. Interplay between experiments and theoretical computations. Coord Chem Rev 2022. [DOI: 10.1016/j.ccr.2022.214742] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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63
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Xiao H, Zhang Q, Ahmad M, Dong S, Zhang Y, Fang D, Wang X, Peng H, Lei Y, Wu G, Bai Y, Deng S, Ye F, Zeng Z. Carbonate Mediated Hole Transfer Boosting the Photocatalytic Degradation of Organic Pollutants over Carbon Nitride Nanosheets. Sep Purif Technol 2022. [DOI: 10.1016/j.seppur.2022.122580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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64
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Khan MA, Sen UR, Khan S, Sengupta S, Shruti S, Naskar S. Manganese based Molecular Water Oxidation Catalyst: From Natural to Artificial Photosynthesis. COMMENT INORG CHEM 2022. [DOI: 10.1080/02603594.2022.2130273] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
| | | | - Sahanwaj Khan
- Department of Chemistry, Birla Institute of Technology-Mesra, Ranchi, India
| | - Swaraj Sengupta
- Department of Chemical Engineering, Birla Institute of Technology-Mesra, Ranchi, India
| | - Sonal Shruti
- Department of Chemistry, Birla Institute of Technology-Mesra, Ranchi, India
| | - Subhendu Naskar
- Department of Chemistry, Birla Institute of Technology-Mesra, Ranchi, India
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65
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Nguyen NTK, Lebastard C, Wilmet M, Dumait N, Renaud A, Cordier S, Ohashi N, Uchikoshi T, Grasset F. A review on functional nanoarchitectonics nanocomposites based on octahedral metal atom clusters (Nb 6, Mo 6, Ta 6, W 6, Re 6): inorganic 0D and 2D powders and films. SCIENCE AND TECHNOLOGY OF ADVANCED MATERIALS 2022; 23:547-578. [PMID: 36212682 PMCID: PMC9542349 DOI: 10.1080/14686996.2022.2119101] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/19/2022] [Revised: 08/10/2022] [Accepted: 08/24/2022] [Indexed: 05/29/2023]
Abstract
This review is dedicated to various functional nanoarchitectonic nanocomposites based on molecular octahedral metal atom clusters (Nb6, Mo6, Ta6, W6, Re6). Powder and film nanocomposites with two-dimensional, one-dimensional and zero-dimensional morphologies are presented, as well as film matrices from organic polymers to inorganic layered oxides. The high potential and synergetic effects of these nanocomposites for biotechnology applications, photovoltaic, solar control, catalytic, photonic and sensor applications are demonstrated. This review also provides a basic level of understanding how nanocomposites are characterized and processed using different techniques and methods. The main objective of this review would be to provide guiding significance for the design of new high-performance nanocomposites based on transition metal atom clusters.
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Affiliation(s)
- Ngan T. K. Nguyen
- CNRS-Saint Gobain-NIMS, IRL3629, Laboratory for Innovative Key Materials and Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba, Japan
- International Center for Young Scientists, ICYS-Sengen, Global Networking Division, NIMS, Tsukuba, Japan
| | - Clément Lebastard
- CNRS-Saint Gobain-NIMS, IRL3629, Laboratory for Innovative Key Materials and Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba, Japan
- Université Rennes, CNRS, ISCR, UMR6226, Rennes, France
| | - Maxence Wilmet
- CNRS-Saint Gobain-NIMS, IRL3629, Laboratory for Innovative Key Materials and Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba, Japan
- Université Rennes, CNRS, ISCR, UMR6226, Rennes, France
- Saint Gobain Research Paris, Aubervilliers, France
| | - Noée Dumait
- Université Rennes, CNRS, ISCR, UMR6226, Rennes, France
| | - Adèle Renaud
- Université Rennes, CNRS, ISCR, UMR6226, Rennes, France
| | | | - Naoki Ohashi
- CNRS-Saint Gobain-NIMS, IRL3629, Laboratory for Innovative Key Materials and Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba, Japan
- Research Center for Functional Materials, NIMS, Tsukuba, Japan
| | - Tetsuo Uchikoshi
- CNRS-Saint Gobain-NIMS, IRL3629, Laboratory for Innovative Key Materials and Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba, Japan
- Research Center for Functional Materials, NIMS, Tsukuba, Japan
| | - Fabien Grasset
- CNRS-Saint Gobain-NIMS, IRL3629, Laboratory for Innovative Key Materials and Structures (LINK), National Institute for Materials Science (NIMS), Tsukuba, Japan
- Université Rennes, CNRS, ISCR, UMR6226, Rennes, France
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66
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Chen Y, Seo JK, Sun Y, Wynn TA, Olguin M, Zhang M, Wang J, Xi S, Du Y, Yuan K, Chen W, Fisher AC, Wang M, Feng Z, Gracia J, Huang L, Du S, Gao HJ, Meng YS, Xu ZJ. Enhanced oxygen evolution over dual corner-shared cobalt tetrahedra. Nat Commun 2022; 13:5510. [PMID: 36127321 PMCID: PMC9489709 DOI: 10.1038/s41467-022-33000-w] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Accepted: 08/25/2022] [Indexed: 11/30/2022] Open
Abstract
Developing efficient catalysts is of paramount importance to oxygen evolution, a sluggish anodic reaction that provides essential electrons and protons for various electrochemical processes, such as hydrogen generation. Here, we report that the oxygen evolution reaction (OER) can be efficiently catalyzed by cobalt tetrahedra, which are stabilized over the surface of a Swedenborgite-type YBCo4O7 material. We reveal that the surface of YBaCo4O7 possesses strong resilience towards structural amorphization during OER, which originates from its distinctive structural evolution toward electrochemical oxidation. The bulk of YBaCo4O7 composes of corner-sharing only CoO4 tetrahedra, which can flexibly alter their positions to accommodate the insertion of interstitial oxygen ions and mediate the stress during the electrochemical oxidation. The density functional theory calculations demonstrate that the OER is efficiently catalyzed by a binuclear active site of dual corner-shared cobalt tetrahedra, which have a coordination number switching between 3 and 4 during the reaction. We expect that the reported active structural motif of dual corner-shared cobalt tetrahedra in this study could enable further development of compounds for catalyzing the OER. Efficient oxygen evolution relies on the development of promising catalysts. Herein, the authors demonstrate that cobalt tetrahedra, stabilized over the surface of YBCo4O7 material, can catalyze oxygen evolution reaction efficiently.
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Affiliation(s)
- Yubo Chen
- School of Material Science and Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore.,The Cambridge Centre for Advanced Research and Education in Singapore, 1 CREATE way, Singapore, 138602, Singapore.,Solar Fuels Laboratory, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore.,Energy Research Institute @ Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore
| | - Joon Kyo Seo
- Department of Nano Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.,Materials Science and Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.,Gwangju Clean Energy Research Center, Korea Institute of Energy Research, Gwangju, 61003, Republic of Korea
| | - Yuanmiao Sun
- School of Material Science and Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore
| | - Thomas A Wynn
- Department of Nano Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.,Materials Science and Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA
| | - Marco Olguin
- Department of Nano Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.,Materials Science and Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA
| | - Minghao Zhang
- Department of Nano Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA.,Materials Science and Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA
| | - Jingxian Wang
- School of Material Science and Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore
| | - Shibo Xi
- Institute of Chemical and Engineering Sciences, A*STAR, 1 Pesek Road, Singapore, 627833, Singapore
| | - Yonghua Du
- Institute of Chemical and Engineering Sciences, A*STAR, 1 Pesek Road, Singapore, 627833, Singapore
| | - Kaidi Yuan
- Department of Physics, National University of Singapore, 2 Science Drive 3, Singapore, 117542, Singapore
| | - Wei Chen
- Department of Physics, National University of Singapore, 2 Science Drive 3, Singapore, 117542, Singapore
| | - Adrian C Fisher
- The Cambridge Centre for Advanced Research and Education in Singapore, 1 CREATE way, Singapore, 138602, Singapore.,Department of Chemical Engineering, University of Cambridge, Cambridge, CB2 3RA, UK
| | - Maoyu Wang
- School of Chemical, Biological, and Environmental Engineering, Oregon State University, Corvallis, OR, 97331, USA
| | - Zhenxing Feng
- School of Chemical, Biological, and Environmental Engineering, Oregon State University, Corvallis, OR, 97331, USA
| | - Jose Gracia
- MagnetoCat SL, General Polavieja 9 3I, Alicante, 03012, Spain
| | - Li Huang
- Beijing National Laboratory for Condensed Matter Physics and Institute of Physics, Chinese Academy of Science, Beijing, 100190, China
| | - Shixuan Du
- Beijing National Laboratory for Condensed Matter Physics and Institute of Physics, Chinese Academy of Science, Beijing, 100190, China
| | - Hong-Jun Gao
- Beijing National Laboratory for Condensed Matter Physics and Institute of Physics, Chinese Academy of Science, Beijing, 100190, China
| | - Ying Shirley Meng
- Department of Nano Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA. .,Materials Science and Engineering, University of California San Diego, 9500 Gilman Drive, La Jolla, CA, 92093, USA. .,Pritzker School of Molecular Engineering, University of Chicago, Chicago, IL, 60637, USA.
| | - Zhichuan J Xu
- School of Material Science and Engineering, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore. .,The Cambridge Centre for Advanced Research and Education in Singapore, 1 CREATE way, Singapore, 138602, Singapore. .,Solar Fuels Laboratory, Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore. .,Energy Research Institute @ Nanyang Technological University, 50 Nanyang Avenue, Singapore, 639798, Singapore.
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67
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The Investigation of the Impact of Toxicity of Metals on Oxygen-Evolving Complex in Spinacia oleracea. Antioxidants (Basel) 2022; 11:antiox11091802. [PMID: 36139876 PMCID: PMC9495821 DOI: 10.3390/antiox11091802] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Revised: 08/17/2022] [Accepted: 08/24/2022] [Indexed: 11/21/2022] Open
Abstract
The current article reported the investigation of metal toxicity on the oxygen-evolving complex (OEC) in Spinacia oleracea related to depletion in chloride ion concentration, an essential part of the photosystem (II). The greenhouse experiment was conducted where S. oleracea was cultivated in three replicates with control plants (plants “a”) treated with tap water. Moreover, 30 ppm of Cu2+ ion solution and Pb2+ ion solution was used to irrigate the rest of the plants, labeled as plants “b” and “c”, respectively, on alternative days. Advanced technologies such as Atomic Absorption Spectrophotometry (AAS), Scanning Electron Microscopy (SEM), Energy Dispersive Spectroscopy (EDS), and UV-visible Spectrophotometry were used to monitor the essential nutrients in leaves to validate the function of the photosystem (I and II). Reduced Cl− ions contents showed that both metals (Cu2+ and Pb2+) altered the essential elements of the oxygen-evolving complex (OEC) of photosystem (II), required to maintain the coordination structure of the Mn4CaO5 cluster. SEM analysis revealed the modified leaf structure of the S. oleracea under Cu2+ and Pb2+ accumulation due to which distorted cellular structure, reduced surface area, and the (shattered) stomatal opening compared to the plants “a” were observed. The EDS analysis of plants “b” and “c” showed high oxygen contents followed by reduced chloride contents over plants “a”, reflecting the infirmity of OEC to push out oxygen, which leads to generating oxidative stress. The lower pigment concentration in leaves of metal-contaminated plants “b” and “c” impacts carbon assimilation, which is linked to the reduced stomatal opening and influences the gaseous exchange rates. Additionally, increased contents of K+ and Ca2+ may be due to self-defense mechanisms under low chloride contents to speed up oxygen evolution to protect plants against oxidative stress. It was concluded that Cu2+ and Pb2+ metal toxicity influences essential Cl− and K+ contents, which modify the photosystem II system; subsequently, a reduced growth rate was observed.
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68
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Yoon S, Seo H, Jin K, Kim HG, Lee SY, Jo J, Cho KH, Ryu J, Yoon A, Kim YW, Zuo JM, Kwon YK, Nam KT, Kim M. Atomic Reconstruction and Oxygen Evolution Reaction of Mn 3O 4 Nanoparticles. J Phys Chem Lett 2022; 13:8336-8343. [PMID: 36040956 DOI: 10.1021/acs.jpclett.2c01638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
Understanding the chemical states of individual surface atoms and their arrangements is essential for addressing several current issues such as catalysis, energy stroage/conversion, and environmental protection. Here, we exploit a profile imaging technique to understand the correlation between surface atomic structures and the oxygen evolution reaction (OER) in Mn3O4 nanoparticles. We image surface structures of Mn3O4 nanoparticles and observe surface reconstructions in the (110) and (101) planes. Mn3+ ions at the surface, which are commonly considered as the active sites in OER, disappear from the reconstructed planes, whereas Mn3+ ions are still exposed at the edges of nanoparticles. Our observations suggest that surface reconstructions can deactivate low-index surfaces of Mn oxides in OER. These structural and chemical observations are further validated by density functional theory calculations. This work shows why atomic-scale characterization of surface structures is crucial for a molecular-level understanding of a chemical reaction in oxide nanoparticles.
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Affiliation(s)
- Sangmoon Yoon
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
- Department of Physics, Gachon University, Seongnam, Gyeonggi-do13120, Republic of Korea
| | - Hongmin Seo
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
| | - Kyoungsuk Jin
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
- Department of Chemistry and Research Institute for Natural Sciences, Korea University, Seoul02841, Republic of Korea
| | - Hyoung Gyun Kim
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
| | - Seung-Yong Lee
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
- Division of Materials Science and Engineering, Hanyang University, Seoul04763, Republic of Korea
| | - Janghyun Jo
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
| | - Kang Hee Cho
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
| | - Jinseok Ryu
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
| | - Aram Yoon
- Department of Materials Science and Engineering, University of Illinois, Urbana-Champaign, Illinois61801, United States
| | - Young-Woon Kim
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
| | - Jian-Min Zuo
- Department of Materials Science and Engineering, University of Illinois, Urbana-Champaign, Illinois61801, United States
| | - Young-Kyun Kwon
- Department of Physics, Department of Information Display, and Research Institute for Basic Sciences, Kyung Hee University, Seoul02447, Republic of Korea
| | - Ki Tae Nam
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
| | - Miyoung Kim
- Department of Materials Science and Engineering, Seoul National University, Seoul08826, Republic of Korea
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69
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Sugo Y, Ishikita H. Proton-mediated photoprotection mechanism in photosystem II. FRONTIERS IN PLANT SCIENCE 2022; 13:934736. [PMID: 36161009 PMCID: PMC9490181 DOI: 10.3389/fpls.2022.934736] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Accepted: 08/08/2022] [Indexed: 06/16/2023]
Abstract
Photo-induced charge separation, which is terminated by electron transfer from the primary quinone QA to the secondary quinone QB, provides the driving force for O2 evolution in photosystem II (PSII). However, the backward charge recombination using the same electron-transfer pathway leads to the triplet chlorophyll formation, generating harmful singlet-oxygen species. Here, we investigated the molecular mechanism of proton-mediated QA ⋅- stabilization. Quantum mechanical/molecular mechanical (QM/MM) calculations show that in response to the loss of the bicarbonate ligand, a low-barrier H-bond forms between D2-His214 and QA ⋅-. The migration of the proton from D2-His214 toward QA ⋅- stabilizes QA ⋅-. The release of the bicarbonate ligand from the binding Fe2+ site is an energetically uphill process, whereas the bidentate-to-monodentate reorientation is almost isoenergetic. These suggest that the bicarbonate protonation and decomposition may be a basis of the mechanism of photoprotection via QA ⋅-/QAH⋅ stabilization, increasing the QA redox potential and activating a charge-recombination pathway that does not generate the harmful singlet oxygen.
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Affiliation(s)
- Yu Sugo
- Department of Applied Chemistry, The University of Tokyo, Tokyo, Japan
| | - Hiroshi Ishikita
- Department of Applied Chemistry, The University of Tokyo, Tokyo, Japan
- Research Center for Advanced Science and Technology, The University of Tokyo, Tokyo, Japan
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70
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Abstract
Overall seawater electrolysis is an important direction for the development of hydrogen energy conversion. The key issues include how to achieve high selectivity, activity, and stability in seawater electrolysis reactions. In this report, the heterostructures of graphdiyne-RhOx-graphdiyne (GDY/RhOx/GDY) were constructed by in situ-controlled growth of GDY on RhOx nanocrystals. A double layer interface of sp-hybridized carbon-oxide-Rhodium (sp-C∼O-Rh) was formed in this system. The microstructures at the interface are composed of active sites of sp-C∼O-Rh. The obvious electron-withdrawing surface enhances the catalytic activity with orders of magnitude, while the GDY outer of the metal oxides guarantees the stability. The electron-donating and withdrawing sp-C∼O-Rh structures enhance the catalytic activity, achieving high-performance overall seawater electrolysis with very small cell voltages of 1.42 and 1.52 V at large current densities of 10 and 500 mA cm-2 at room temperatures and ambient pressures, respectively. The compositional and structural superiority of the GDY-derived sp-C-metal-oxide active center offers great opportunities to engineer tunable redox properties and catalytic performance for seawater electrolysis and beyond. This is a typical successful example of the rational design of catalytic systems.
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71
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Ślesak I, Mazur Z, Ślesak H. Genes encoding the photosystem II proteins are under purifying selection: an insight into the early evolution of oxygenic photosynthesis. PHOTOSYNTHESIS RESEARCH 2022; 153:163-175. [PMID: 35648248 DOI: 10.1007/s11120-022-00917-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2022] [Accepted: 03/28/2022] [Indexed: 06/15/2023]
Abstract
The molecular evolution concerns coding sequences (CDSs) of genes and may affect the structure and function of proteins. Non-uniform use of synonymous codons during translation, known as codon usage bias (CUB), depends on the balance between mutations bias and natural selection. We estimated different CUB indices, i.e. the effective number of codons (ENC), G + C content in the 3rd codon positions (GC3), and codon adaptation index for CDSs of intrinsic proteins of photosystem II (PSII), such as psbA (D1), psbD (D2), psbB (CP47), psbC (CP43), and CDSs of the extrinsic protein psbO (PsbO). These genes occur in all organisms that perform oxygenic photosynthesis (OP) on Earth: cyanobacteria, algae and plants. Comparatively, a similar analysis of codon bias for CDSs of L and M subunits that constitute the core proteins of the type II reaction centre (RCII) in anoxygenic bacteria was performed. Analysis of CUB indices and determination of the number of synonymous (dS) and nonsynonymous substitutions (dN) in all analysed CDSs indicated that the crucial PSII and RCII proteins were under strong purifying (negative) selection in course of evolution. Purifying selection was also estimated for CDSs of atpA, the α subunit of ATP synthase, an enzyme that was most likely already present in the last universal common ancestor (LUCA). The data obtained point to an ancient origin of OP, even in the earliest stages of the evolution of life on Earth.
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Affiliation(s)
- Ireneusz Ślesak
- The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland.
| | - Zofia Mazur
- The Franciszek Górski Institute of Plant Physiology, Polish Academy of Sciences, Niezapominajek 21, 30-239, Kraków, Poland
| | - Halina Ślesak
- Institute of Botany, Faculty of Biology, Jagiellonian University, Gronostajowa 9, 30-387, Kraków, Poland
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72
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Imaizumi K, Ifuku K. Binding and functions of the two chloride ions in the oxygen-evolving center of photosystem II. PHOTOSYNTHESIS RESEARCH 2022; 153:135-156. [PMID: 35698013 DOI: 10.1007/s11120-022-00921-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Accepted: 05/02/2022] [Indexed: 06/15/2023]
Abstract
Light-driven water oxidation in photosynthesis occurs at the oxygen-evolving center (OEC) of photosystem II (PSII). Chloride ions (Cl-) are essential for oxygen evolution by PSII, and two Cl- ions have been found to specifically bind near the Mn4CaO5 cluster in the OEC. The retention of these Cl- ions within the OEC is critically supported by some of the membrane-extrinsic subunits of PSII. The functions of these two Cl- ions and the mechanisms of their retention both remain to be fully elucidated. However, intensive studies performed recently have advanced our understanding of the functions of these Cl- ions, and PSII structures from various species have been reported, aiding the interpretation of previous findings regarding Cl- retention by extrinsic subunits. In this review, we summarize the findings to date on the roles of the two Cl- ions bound within the OEC. Additionally, together with a short summary of the functions of PSII membrane-extrinsic subunits, we discuss the mechanisms of Cl- retention by these extrinsic subunits.
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Affiliation(s)
- Ko Imaizumi
- Division of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Kyoto, 606-8502, Japan
| | - Kentaro Ifuku
- Division of Applied Life Sciences, Graduate School of Agriculture, Kyoto University, Kyoto, 606-8502, Japan.
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73
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Yang F, Wei Z, Long L. Response mechanisms to ocean warming exposure in Effrenium voratum (Symbiodiniaceae). MARINE POLLUTION BULLETIN 2022; 182:114032. [PMID: 35969902 DOI: 10.1016/j.marpolbul.2022.114032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2022] [Revised: 07/31/2022] [Accepted: 08/02/2022] [Indexed: 06/15/2023]
Abstract
Ocean warming is an extreme environment event that has profound and lasting impacts on Symbiodiniaceae. However, their response mechanisms to elevated temperature exposure are poorly understood. In this study, the physiological and transcriptional responses of Effrenium voratum (Symbiodiniaceae) to ocean warming were examined. After exposure to 30 °C, no significant variations in growth, chlorophyll a, or photosynthetic and respiration rates were observed, while a higher temperature (34 °C) significantly reduced these physiological measurements. Meanwhile, lipid content and fatty acid composition were altered at high temperature (i.e., elevated degree of fatty acid saturation). Such biochemical constituents likely contributed to the mitigation of the negative effects of elevated temperatures. Furthermore, higher expression levels of genes related to the synthesis and elongation of fatty acids were detected at high temperature. The adjustment of lipids and fatty acid composition may be a potential mechanism by which E. voratum may survive under future global warming. ONE SENTENCE SUMMARY: The adjustment of lipids and fatty acid composition may be a potential mechanism by which E. voratum acclimate to future global warming.
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Affiliation(s)
- Fangfang Yang
- Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China; Southern Marine Science and Engineering Guangdong Laboratory, Guangzhou 511458, China
| | - Zhangliang Wei
- Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China
| | - Lijuan Long
- Key Laboratory of Tropical Marine Bio-Resources and Ecology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou 510301, China; Southern Marine Science and Engineering Guangdong Laboratory, Guangzhou 511458, China.
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74
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Yu JC, Lu JZ, Cui XY, Guo L, Wang ZJ, Liu YD, Wang F, Qi MF, Liu YF, Li TL. Melatonin mediates reactive oxygen species homeostasis via SlCV to regulate leaf senescence in tomato plants. J Pineal Res 2022; 73:e12810. [PMID: 35620796 DOI: 10.1111/jpi.12810] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Revised: 05/08/2022] [Accepted: 05/21/2022] [Indexed: 11/28/2022]
Abstract
Melatonin (MT) functions in removing reactive oxygen species (ROS) and delaying plant senescence, thereby acting as an antioxidant; however, the molecular mechanism underlying the specific action of MT is unclear. Herein, we used the mutant plants carrying the MT decomposition gene melatonin 3-hydroxylase (M3H) in tomato to elucidate the specific mechanism of action of MT. SlM3H-OE accelerated senescence by decreasing the content of endogenous MT in plants. SlM3H is a senescence-related gene that positively regulates aging. MT inhibited the expression of the senescence-related gene SlCV to scavenge ROS, induced stable chloroplast structure, and delayed leaf senescence. Simultaneously, MT weakened the interaction between SlCV and SlPsbO/SlCAT3, reduced ROS production in photosystem II, and promoted ROS elimination. In conclusion, MT regulates ROS homeostasis and delays leaf aging in tomato plants through SlCV expression modulation.
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Affiliation(s)
- Jun-Chi Yu
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
| | - Jia-Zhi Lu
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
| | - Xiao-Yu Cui
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
| | - Lei Guo
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
| | - Zhi-Jun Wang
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
| | - Yu-Dong Liu
- Agricultural Department, Shihezi University, Shihezi, People's Republic of China
| | - Feng Wang
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
| | - Ming-Fang Qi
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
| | - Yu-Feng Liu
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
| | - Tian-Lai Li
- College of Horticulture, Shenyang Agricultural University, Shenyang, People's Republic of China
- Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, Shenyang, People's Republic of China
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75
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Insight into the huge difference in redox potential between the structural OEC analogues Mn3CaO4 and Mn4CaO4. Inorganica Chim Acta 2022. [DOI: 10.1016/j.ica.2022.121023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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76
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Kobayashi A, Takizawa SY, Hirahara M. Photofunctional molecular assembly for artificial photosynthesis: Beyond a simple dye sensitization strategy. Coord Chem Rev 2022. [DOI: 10.1016/j.ccr.2022.214624] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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77
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Lang SM, Helzel I, Bernhardt TM, Barnett RN, Landman U. Spin-Gated Selectivity of the Water Oxidation Reaction Mediated by Free Pentameric Ca xMn 5-xO 5+ Clusters. J Am Chem Soc 2022; 144:15339-15347. [PMID: 35943864 DOI: 10.1021/jacs.2c06562] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
We report on the first preparation of isolated ligand-free CaMn4O5+ gas-phase clusters, as well as other pentameric CaxMn5-xO5+ (x = 0-4) clusters with varying Ca contents, which serve as molecular models of the natural CaMn4O5 inorganic cluster in photosystem II. Ion trap reactivity studies with D2O and H218O reveal a pronounced cluster composition-dependent ability to mediate the oxidation of water to hydrogen peroxide. First-principles density functional theory simulations elucidate the mechanism of water oxidation, proceeding via formation of a terminal oxyl radical followed by oxyl/hydroxy (O/OH) coupling. The critical coupling reaction step entails a single electron transfer from the oxyl radical to the accommodating cluster core with a concurrent O/OH coupling forming an adsorbed OOH intermediate group. The spin-conserving electron transfer step takes place when the spin of the transferred electron is aligned with the spins of the d-electrons of the Mn atoms in the cuboidal high-spin cluster isomer. The d-electrons provide a ferromagnetically ordered environment that facilitates the spin-gated selective electron transfer process, resulting in parallel-spin-exchange stabilization and a lowered transition state barrier for the coupling reaction involving the frontier orbitals of the oxyl and hydroxy reactant intermediates.
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Affiliation(s)
- Sandra M Lang
- Institute of Surface Chemistry and Catalysis, University of Ulm, Albert-Einstein-Allee 47, 89069 Ulm, Germany
| | - Irene Helzel
- Institute of Surface Chemistry and Catalysis, University of Ulm, Albert-Einstein-Allee 47, 89069 Ulm, Germany
| | - Thorsten M Bernhardt
- Institute of Surface Chemistry and Catalysis, University of Ulm, Albert-Einstein-Allee 47, 89069 Ulm, Germany
| | - Robert N Barnett
- School of Physics, Georgia Institute of Technology, Atlanta, Georgia 30332-0430, United States
| | - Uzi Landman
- School of Physics, Georgia Institute of Technology, Atlanta, Georgia 30332-0430, United States
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78
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Li M, Liao RZ. Water Oxidation Catalyzed by a Bioinspired Tetranuclear Manganese Complex: Mechanistic Study and Prediction. CHEMSUSCHEM 2022; 15:e202200187. [PMID: 35610183 DOI: 10.1002/cssc.202200187] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 05/23/2022] [Indexed: 06/15/2023]
Abstract
Density functional theory calculations were utilized to elucidate the water oxidation mechanism catalyzed by polyanionic tetramanganese complex a [MnIII 3 MnIV O3 (CH3 COO)3 (A-α-SiW9 O34 )]6- . Theoretical results indicated that catalytic active species 1 (Mn4 III,III,IV,IV ) was formed after O2 formation in the first turnover. From 1, three sequential proton-coupled electron transfer (PCET) oxidations led to the MnIV -oxyl radical 4 (Mn4 IV,IV,IV,IV -O⋅). Importantly, 4 had an unusual butterfly-shaped Mn2 O2 core for the two substrate-coordinated Mn sites, which facilitated O-O bond formation via direct coupling of the oxyl radical and the adjacent MnIV -coordinated hydroxide to produce the hydroperoxide intermediate Int1 (Mn4 III,IV,IV,IV -OOH). This step had an overall energy barrier of 24.9 kcal mol-1 . Subsequent PCET oxidation of Int1 to Int2 (Mn4 III,IV,IV,IV -O2 ⋅) enabled the O2 release in a facile process. Furthermore, apart from the Si-centered complex, computational study suggested that tetramanganese polyoxometalates with Ge, P, and S could also catalyze the water oxidation process, where those bearing P and S likely present higher activities.
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Affiliation(s)
- Man Li
- Key Laboratory of Material Chemistry for Energy Conversion and Storage, Ministry of Education, Hubei Key Laboratory of Bioinorganic Chemistry and Materia Medica, Hubei Key Laboratory of Materials Chemistry and Service Failure, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology, Wuhan, 430074, P. R. China
| | - Rong-Zhen Liao
- Key Laboratory of Material Chemistry for Energy Conversion and Storage, Ministry of Education, Hubei Key Laboratory of Bioinorganic Chemistry and Materia Medica, Hubei Key Laboratory of Materials Chemistry and Service Failure, School of Chemistry and Chemical Engineering, Huazhong University of Science and Technology, Wuhan, 430074, P. R. China
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79
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Ariga K. Materials nanoarchitectonics in a two-dimensional world within a nanoscale distance from the liquid phase. NANOSCALE 2022; 14:10610-10629. [PMID: 35838591 DOI: 10.1039/d2nr02513b] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Promoted understanding of nanotechnology has enabled the construction of functional materials with nanoscale-regulated structures. Accordingly, materials science requires one-step further innovation by coupling nanotechnology with the other materials sciences. As a post-nanotechnology concept, nanoarchitectonics has recently been proposed. It is a methodology to architect functional material systems using atomic, molecular, and nanomaterial unit-components. One of the attractive methodologies would be to develop nanoarchitectonics in a defined dimensional environment with certain dynamism, such as liquid interfaces. However, nanoarchitectonics at liquid interfaces has not been fully explored because of difficulties in direct observations and evaluations with high-resolutions. This unsatisfied situation in the nanoscale understanding of liquid interfaces may keep liquid interfaces as unexplored and attractive frontiers in nanotechnology and nanoarchitectonics. Research efforts related to materials nanoarchitectonics on liquid interfaces have been continuously made. As exemplified in this review paper, a wide range of materials can be organized and functionalized on liquid interfaces, including organic molecules, inorganic nanomaterials, hybrids, organic semiconductor thin films, proteins, and stem cells. Two-dimensional nanocarbon sheets have been fabricated by molecular reactions at dynamically moving interfaces, and metal-organic frameworks and covalent organic frameworks have been fabricated by specific interactions and reactions at liquid interfaces. Therefore, functions such as sensors, devices, energy-related applications, and cell control are being explored. In fact, the potential for the nanoarchitectonics of functional materials in two-dimensional nanospaces at liquid surfaces is sufficiently high. On the basis of these backgrounds, this short review article describes recent approaches to materials nanoarchitectonics in a liquid-based two-dimensional world, i.e., interfacial regions within a nanoscale distance from the liquid phase.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
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80
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Nixon PJ, Telfer A. Remembering James Barber (1940-2020). PHOTOSYNTHESIS RESEARCH 2022; 153:1-20. [PMID: 35534741 PMCID: PMC9522743 DOI: 10.1007/s11120-022-00919-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/02/2022] [Accepted: 03/31/2022] [Indexed: 06/14/2023]
Abstract
James Barber, known to colleagues and friends as Jim, passed away in January 2020 after a long battle against cancer. During his long and distinguished career in photosynthesis research, Jim made many outstanding contributions with the pinnacle achieving his dream of determining the first detailed structure of the Mn cluster involved in photosynthetic water oxidation. Here, colleagues and friends remember Jim and reflect upon his scientific career and the impact he had on their lives and the scientific community.
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Affiliation(s)
- Peter J Nixon
- Sir Ernst Chain Building - Wolfson Laboratories, Department of Life Sciences, Imperial College London, S. Kensington Campus, London, SW7 2AZ, UK.
| | - Alison Telfer
- Sir Ernst Chain Building - Wolfson Laboratories, Department of Life Sciences, Imperial College London, S. Kensington Campus, London, SW7 2AZ, UK.
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81
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Imaizumi K, Nishimura T, Nagao R, Saito K, Nakano T, Ishikita H, Noguchi T, Ifuku K. D139N mutation of PsbP enhances the oxygen-evolving activity of photosystem II through stabilized binding of a chloride ion. PNAS NEXUS 2022; 1:pgac136. [PMID: 36741451 PMCID: PMC9896922 DOI: 10.1093/pnasnexus/pgac136] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/24/2021] [Accepted: 07/19/2022] [Indexed: 02/07/2023]
Abstract
Photosystem II (PSII) is a multisubunit membrane protein complex that catalyzes light-driven oxidation of water to molecular oxygen. The chloride ion (Cl-) has long been known as an essential cofactor for oxygen evolution by PSII, and two Cl- ions (Cl-1 and Cl-2) have been found to specifically bind near the Mn4CaO5 cluster within the oxygen-evolving center (OEC). However, despite intensive studies on these Cl- ions, little is known about the function of Cl-2, the Cl- ion that is associated with the backbone nitrogens of D1-Asn338, D1-Phe339, and CP43-Glu354. In green plant PSII, the membrane extrinsic subunits-PsbP and PsbQ-are responsible for Cl- retention within the OEC. The Loop 4 region of PsbP, consisting of highly conserved residues Thr135-Gly142, is inserted close to Cl-2, but its importance has not been examined to date. Here, we investigated the importance of PsbP-Loop 4 using spinach PSII membranes reconstituted with spinach PsbP proteins harboring mutations in this region. Mutations in PsbP-Loop 4 had remarkable effects on the rate of oxygen evolution by PSII. Moreover, we found that a specific mutation, PsbP-D139N, significantly enhances the oxygen-evolving activity in the absence of PsbQ, but not significantly in its presence. The D139N mutation increased the Cl- retention ability of PsbP and induced a unique structural change in the OEC, as indicated by light-induced Fourier transform infrared (FTIR) difference spectroscopy and theoretical calculations. Our findings provide insight into the functional significance of Cl-2 in the water-oxidizing reaction of PSII.
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Affiliation(s)
- Ko Imaizumi
- Division of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan
| | - Taishi Nishimura
- Division of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan
| | - Ryo Nagao
- Division of Material Science, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan,Research Institute for Interdisciplinary Science, Okayama University, Okayama 700-8530, Japan
| | - Keisuke Saito
- Research Center for Advanced Science and Technology, The University of Tokyo, Tokyo 153-8904, Japan,Department of Applied Chemistry, The University of Tokyo, Tokyo 113-8654 , Japan
| | - Takeshi Nakano
- Division of Integrated Life Science, Graduate School of Biostudies, Kyoto University, Kyoto 606-8502, Japan
| | - Hiroshi Ishikita
- Research Center for Advanced Science and Technology, The University of Tokyo, Tokyo 153-8904, Japan,Department of Applied Chemistry, The University of Tokyo, Tokyo 113-8654 , Japan
| | - Takumi Noguchi
- Division of Material Science, Graduate School of Science, Nagoya University, Nagoya 464-8602, Japan
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82
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Macromolecular conformational changes in photosystem II: interaction between structure and function. Biophys Rev 2022; 14:871-886. [DOI: 10.1007/s12551-022-00979-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Accepted: 07/02/2022] [Indexed: 01/08/2023] Open
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83
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Gao X, Fan H. The Role of Redox-Inactive Metals in Modulating the Redox Potential of the Mn 4CaO 4 Model Complex. Inorg Chem 2022; 61:11539-11549. [PMID: 35839298 DOI: 10.1021/acs.inorgchem.2c00243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Photosynthetic oxygen-evolving center (OEC), the "engine of life", is a unique Mn4CaO5 cluster catalyzing the water oxidation. The role of redox-inactive component Ca2+, which can only be functionally replaced by Sr2+ in a biological environment, has been under debate for a long time. Recently, its modulating effect on the redox potential of native OEC and artificial structural OEC model complex has received great attention, and linear relationship between the potential and the Lewis acidity of the redox-inactive metal has been proposed for the MMn3O4 model complex. In this work, the modulating effect has been studied in detail using the Mn4CaO4 model complex, which is the closest structural model to OEC to date and has a similar redox potential at the S1-S2 transition. We found the redox-inactive metal only has a weak modulating effect on the potential, which is comparable in strength to that of the ligand environments. Meanwhile, the net charge of the complex, which could be changed along with the redox-inactive metal, has a high impact on the potential and can be unified by protonation, deprotonation, or ligand modification. Although the modulating effect of the redox-inactive metal is not very strong, the linear relationship between the potential and the Lewis acidity is still valid for Mn4MO4 complexes. Our results of strong modulating effects for net charge and weak modulating effects for redox-inactive metal fit with the previous experimental observations on Mn4MO4 (M = Ca2+, Y3+, and Gd3+) model complexes, and suggest that Ca2+ can be structurally and electrochemically replaced with other metal cations, together with proper ligand modifications.
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Affiliation(s)
- Xianrui Gao
- Shenyang University of Chemical Technology, Shenyang 110142, China.,State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
| | - Hongjun Fan
- Shenyang University of Chemical Technology, Shenyang 110142, China.,State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Science, Dalian 116023, China
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84
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Chen Y, Xu B, Yao R, Chen C, Zhang C. Mimicking the Oxygen-Evolving Center in Photosynthesis. FRONTIERS IN PLANT SCIENCE 2022; 13:929532. [PMID: 35874004 PMCID: PMC9302449 DOI: 10.3389/fpls.2022.929532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Accepted: 06/20/2022] [Indexed: 06/15/2023]
Abstract
The oxygen-evolving center (OEC) in photosystem II (PSII) of oxygenic photosynthetic organisms is a unique heterometallic-oxide Mn4CaO5-cluster that catalyzes water splitting into electrons, protons, and molecular oxygen through a five-state cycle (Sn, n = 0 ~ 4). It serves as the blueprint for the developing of the man-made water-splitting catalysts to generate solar fuel in artificial photosynthesis. Understanding the structure-function relationship of this natural catalyst is a great challenge and a long-standing issue, which is severely restricted by the lack of a precise chemical model for this heterometallic-oxide cluster. However, it is a great challenge for chemists to precisely mimic the OEC in a laboratory. Recently, significant advances have been achieved and a series of artificial Mn4XO4-clusters (X = Ca/Y/Gd) have been reported, which closely mimic both the geometric structure and the electronic structure, as well as the redox property of the OEC. These new advances provide a structurally well-defined molecular platform to study the structure-function relationship of the OEC and shed new light on the design of efficient catalysts for the water-splitting reaction in artificial photosynthesis.
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Affiliation(s)
- Yang Chen
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Boran Xu
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Ruoqing Yao
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, China
- University of Chinese Academy of Sciences, Beijing, China
| | - Changhui Chen
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, China
| | - Chunxi Zhang
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, China
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85
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Guo Y, Messinger J, Kloo L, Sun L. Reversible Structural Isomerization of Nature's Water Oxidation Catalyst Prior to O-O Bond Formation. J Am Chem Soc 2022; 144:11736-11747. [PMID: 35748306 PMCID: PMC9264352 DOI: 10.1021/jacs.2c03528] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
![]()
Photosynthetic water
oxidation is catalyzed by a manganese–calcium
oxide cluster, which experiences five “S-states” during
a light-driven reaction cycle. The unique “distorted chair”-like
geometry of the Mn4CaO5(6) cluster shows structural
flexibility that has been frequently proposed to involve “open”
and “closed”-cubane forms from the S1 to
S3 states. The isomers are interconvertible in the S1 and S2 states, while in the S3 state,
the open-cubane structure is observed to dominate inThermosynechococcus elongatus (cyanobacteria) samples.
In this work, using density functional theory calculations, we go
beyond the S3+Yz state to the S3nYz• → S4+Yz step, and report for the first time
that the reversible isomerism, which is suppressed in the S3+Yz state, is fully recovered
in the ensuing S3nYz• state due to the proton release
from a manganese-bound water ligand. The altered coordination strength
of the manganese–ligand facilitates formation of the closed-cubane
form, in a dynamic equilibrium with the open-cubane form. This tautomerism
immediately preceding dioxygen formation may constitute the rate limiting
step for O2 formation, and exert a significant influence
on the water oxidation mechanism in photosystem II.
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Affiliation(s)
- Yu Guo
- Center of Artificial Photosynthesis for Solar Fuels and Department of Chemistry, School of Science, Westlake University, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China
| | - Johannes Messinger
- Department of Chemistry, Umeå University, Linnaeus väg 6 (KBC huset), SE-90187 Umeå, Sweden.,Molecular Biomimetics, Department of Chemistry─Ångström Laboratory, Uppsala University, SE-75120 Uppsala, Sweden
| | - Lars Kloo
- Department of Chemistry, School of Engineering Sciences in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, SE-10044 Stockholm, Sweden
| | - Licheng Sun
- Center of Artificial Photosynthesis for Solar Fuels and Department of Chemistry, School of Science, Westlake University, Hangzhou 310024, China.,Institute of Natural Sciences, Westlake Institute for Advanced Study, Hangzhou 310024, China
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86
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Controlling the Deposition Process of Nanoarchitectonic Nanocomposites Based on {Nb 6-xTa xX i12} n+ Octahedral Cluster-Based Building Blocks (X i = Cl, Br; 0 ≤ x ≤ 6, n = 2, 3, 4) for UV-NIR Blockers Coating Applications. NANOMATERIALS 2022; 12:nano12122052. [PMID: 35745391 PMCID: PMC9227475 DOI: 10.3390/nano12122052] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Revised: 05/30/2022] [Accepted: 06/03/2022] [Indexed: 12/20/2022]
Abstract
The antagonism between global energy needs and the obligation to slow global warming is a current challenge. In order to ensure sufficient thermal comfort, the automotive, housing and agricultural building sectors are major energy consumers. Solar control materials and more particularly, selective glazing are part of the solutions proposed to reduce global energy consumption and tackle global warming. In this context, these works are focused on developing new highly ultraviolet (UV) and near-infrared (NIR) absorbent nanocomposite coatings based on K4[{Nb6-xTaxXi12}Xa6]. (X = Cl, Br, 0 ≤ x ≤ 6) transition metal cluster compounds. These compounds contain cluster-based active species that are characterized by their strong absorption of UV and NIR radiations as well as their good transparency in the visible range, which makes them particularly attractive for window applications. Their integration, by solution processes, into a silica-polyethylene glycol or polyvinylpyrrolidone matrices is discussed. Of particular interest is the control and the tuning of their optical properties during the integration and shaping processes. The properties of the solutions and films were investigated by complementary techniques (UV-Vis-NIR spectrometry, ESI-MS, SEM, HRTEM, etc.). Results of these works have led to the development of versatile solar control coatings whose optical properties are competitive with commercialized material.
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87
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Chatenet M, Pollet BG, Dekel DR, Dionigi F, Deseure J, Millet P, Braatz RD, Bazant MZ, Eikerling M, Staffell I, Balcombe P, Shao-Horn Y, Schäfer H. Water electrolysis: from textbook knowledge to the latest scientific strategies and industrial developments. Chem Soc Rev 2022; 51:4583-4762. [PMID: 35575644 PMCID: PMC9332215 DOI: 10.1039/d0cs01079k] [Citation(s) in RCA: 176] [Impact Index Per Article: 88.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2022] [Indexed: 12/23/2022]
Abstract
Replacing fossil fuels with energy sources and carriers that are sustainable, environmentally benign, and affordable is amongst the most pressing challenges for future socio-economic development. To that goal, hydrogen is presumed to be the most promising energy carrier. Electrocatalytic water splitting, if driven by green electricity, would provide hydrogen with minimal CO2 footprint. The viability of water electrolysis still hinges on the availability of durable earth-abundant electrocatalyst materials and the overall process efficiency. This review spans from the fundamentals of electrocatalytically initiated water splitting to the very latest scientific findings from university and institutional research, also covering specifications and special features of the current industrial processes and those processes currently being tested in large-scale applications. Recently developed strategies are described for the optimisation and discovery of active and durable materials for electrodes that ever-increasingly harness first-principles calculations and machine learning. In addition, a technoeconomic analysis of water electrolysis is included that allows an assessment of the extent to which a large-scale implementation of water splitting can help to combat climate change. This review article is intended to cross-pollinate and strengthen efforts from fundamental understanding to technical implementation and to improve the 'junctions' between the field's physical chemists, materials scientists and engineers, as well as stimulate much-needed exchange among these groups on challenges encountered in the different domains.
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Affiliation(s)
- Marian Chatenet
- University Grenoble Alpes, University Savoie Mont Blanc, CNRS, Grenoble INP (Institute of Engineering and Management University Grenoble Alpes), LEPMI, 38000 Grenoble, France
| | - Bruno G Pollet
- Hydrogen Energy and Sonochemistry Research group, Department of Energy and Process Engineering, Faculty of Engineering, Norwegian University of Science and Technology (NTNU) NO-7491, Trondheim, Norway
- Green Hydrogen Lab, Institute for Hydrogen Research (IHR), Université du Québec à Trois-Rivières (UQTR), 3351 Boulevard des Forges, Trois-Rivières, Québec G9A 5H7, Canada
| | - Dario R Dekel
- The Wolfson Department of Chemical Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel
- The Nancy & Stephen Grand Technion Energy Program (GTEP), Technion - Israel Institute of Technology, Haifa 3200003, Israel
| | - Fabio Dionigi
- Department of Chemistry, Chemical Engineering Division, Technical University Berlin, 10623, Berlin, Germany
| | - Jonathan Deseure
- University Grenoble Alpes, University Savoie Mont Blanc, CNRS, Grenoble INP (Institute of Engineering and Management University Grenoble Alpes), LEPMI, 38000 Grenoble, France
| | - Pierre Millet
- Paris-Saclay University, ICMMO (UMR 8182), 91400 Orsay, France
- Elogen, 8 avenue du Parana, 91940 Les Ulis, France
| | - Richard D Braatz
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Martin Z Bazant
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
- Department of Mathematics, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, Massachusetts 02139, USA
| | - Michael Eikerling
- Chair of Theory and Computation of Energy Materials, Division of Materials Science and Engineering, RWTH Aachen University, Intzestraße 5, 52072 Aachen, Germany
- Institute of Energy and Climate Research, IEK-13: Modelling and Simulation of Materials in Energy Technology, Forschungszentrum Jülich GmbH, 52425 Jülich, Germany
| | - Iain Staffell
- Centre for Environmental Policy, Imperial College London, London, UK
| | - Paul Balcombe
- Division of Chemical Engineering and Renewable Energy, School of Engineering and Material Science, Queen Mary University of London, London, UK
| | - Yang Shao-Horn
- Research Laboratory of Electronics and Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, USA
| | - Helmut Schäfer
- Institute of Chemistry of New Materials, The Electrochemical Energy and Catalysis Group, University of Osnabrück, Barbarastrasse 7, 49076 Osnabrück, Germany.
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88
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Yuan S, Peng J, Cai B, Huang Z, Garcia-Esparza AT, Sokaras D, Zhang Y, Giordano L, Akkiraju K, Zhu YG, Hübner R, Zou X, Román-Leshkov Y, Shao-Horn Y. Tunable metal hydroxide-organic frameworks for catalysing oxygen evolution. NATURE MATERIALS 2022; 21:673-680. [PMID: 35210585 DOI: 10.1038/s41563-022-01199-0] [Citation(s) in RCA: 61] [Impact Index Per Article: 30.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2020] [Accepted: 01/13/2022] [Indexed: 05/10/2023]
Abstract
The oxygen evolution reaction is central to making chemicals and energy carriers using electrons. Combining the great tunability of enzymatic systems with known oxide-based catalysts can create breakthrough opportunities to achieve both high activity and stability. Here we report a series of metal hydroxide-organic frameworks (MHOFs) synthesized by transforming layered hydroxides into two-dimensional sheets crosslinked using aromatic carboxylate linkers. MHOFs act as a tunable catalytic platform for the oxygen evolution reaction, where the π-π interactions between adjacent stacked linkers dictate stability, while the nature of transition metals in the hydroxides modulates catalytic activity. Substituting Ni-based MHOFs with acidic cations or electron-withdrawing linkers enhances oxygen evolution reaction activity by over three orders of magnitude per metal site, with Fe substitution achieving a mass activity of 80 A [Formula: see text] at 0.3 V overpotential for 20 h. Density functional theory calculations correlate the enhanced oxygen evolution reaction activity with the MHOF-based modulation of Ni redox and the optimized binding of oxygenated intermediates.
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Affiliation(s)
- Shuai Yuan
- Research Laboratory of Electronics, Massachusetts Institute of Technology, Cambridge, MA, USA
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
- State Key Laboratory of Coordination Chemistry, School of Chemistry and Chemical Engineering, Nanjing University, Nanjing, China
| | - Jiayu Peng
- Department of Materials Science and Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Bin Cai
- Research Laboratory of Electronics, Massachusetts Institute of Technology, Cambridge, MA, USA
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
- School of Chemistry and Chemical Engineering, Shandong University, Jinan, China
| | - Zhehao Huang
- Department of Materials and Environmental Chemistry, Stockholm University, Stockholm, Sweden
| | - Angel T Garcia-Esparza
- Stanford Synchrotron Radiation Light Source, SLAC National Accelerator Laboratory, Menlo Park, CA, USA
| | - Dimosthenis Sokaras
- Stanford Synchrotron Radiation Light Source, SLAC National Accelerator Laboratory, Menlo Park, CA, USA
| | - Yirui Zhang
- Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Livia Giordano
- Research Laboratory of Electronics, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Karthik Akkiraju
- Department of Materials Science and Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - Yun Guang Zhu
- Research Laboratory of Electronics, Massachusetts Institute of Technology, Cambridge, MA, USA
- Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA
| | - René Hübner
- Institute of Ion Beam Physics and Materials Research, Helmholtz-Zentrum Dresden-Rossendorf, Dresden, Germany
| | - Xiaodong Zou
- Department of Materials and Environmental Chemistry, Stockholm University, Stockholm, Sweden
| | - Yuriy Román-Leshkov
- Department of Chemical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.
| | - Yang Shao-Horn
- Research Laboratory of Electronics, Massachusetts Institute of Technology, Cambridge, MA, USA.
- Department of Materials Science and Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.
- Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, MA, USA.
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89
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Kılıç M, Gollan PJ, Lepistö A, Isojärvi J, Sakurai I, Aro E, Mulo P. Gene expression and organization of thylakoid protein complexes in the PSII-less mutant of Synechocystis sp. PCC 6803. PLANT DIRECT 2022; 6:e409. [PMID: 35774619 PMCID: PMC9219013 DOI: 10.1002/pld3.409] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/27/2022] [Revised: 05/13/2022] [Accepted: 05/16/2022] [Indexed: 06/15/2023]
Abstract
Photosystems I and II (PSI and PSII) are the integral components of the photosynthetic electron transport chain that utilize light to provide chemical energy for CO2 fixation. In this study, we investigated how the deficiency of PSII affects the gene expression, accumulation, and organization of thylakoid protein complexes as well as physiological characteristics of Synechocystis sp. PCC 6803 by combining biochemical, biophysical, and transcriptomic approaches. RNA-seq analysis showed upregulated expression of genes encoding the PSII core proteins, and downregulation of genes associated with interaction between light-harvesting phycobilisomes and PSI. Two-dimensional separation of thylakoid protein complexes confirmed the lack of PSII complexes, yet unassembled PSII subunits were detected. The content of PsaB representing PSI was lower, while the content of cytochrome b6f complexes was higher in the PSII-less strain as compared with control (CS). Application of oxygraph measurements revealed higher rates of dark respiration and lower PSI activity in the mutant. The latter likely resulted from the detected decrease in the accumulation of PSI, PSI monomerization, increased proportion of energetically decoupled phycobilisomes in PSII-less cultures, and low abundance of phycocyanin. Merging the functional consequences of PSII depletion with differential protein and transcript accumulation in the mutant, in comparison to CS, identified signal transduction from the photosynthetic apparatus to the genome level.
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Affiliation(s)
- Mehmet Kılıç
- Molecular Plant Biology, Department of Life TechnologiesUniversity of TurkuTurkuFinland
| | - Peter J. Gollan
- Molecular Plant Biology, Department of Life TechnologiesUniversity of TurkuTurkuFinland
| | - Anniina Lepistö
- Molecular Plant Biology, Department of Life TechnologiesUniversity of TurkuTurkuFinland
| | - Janne Isojärvi
- Molecular Plant Biology, Department of Life TechnologiesUniversity of TurkuTurkuFinland
- Present address:
Turku PET CentreUniversity of TurkuTurkuFinland
| | - Isamu Sakurai
- Molecular Plant Biology, Department of Life TechnologiesUniversity of TurkuTurkuFinland
| | - Eva‐Mari Aro
- Molecular Plant Biology, Department of Life TechnologiesUniversity of TurkuTurkuFinland
| | - Paula Mulo
- Molecular Plant Biology, Department of Life TechnologiesUniversity of TurkuTurkuFinland
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90
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Raj M, Padhi SK. Water Oxidation by a Neoteric Dinuclear Mn(II) Electrocatalyst in Aqueous Medium. Eur J Inorg Chem 2022. [DOI: 10.1002/ejic.202200238] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Manaswini Raj
- Indian Institute of Technology (Indian School of Mines): Indian Institute of Technology Chemistry and Chemical Biology INDIA
| | - Sumanta Kumar Padhi
- Indian Institute of Technology (Indian School of Mines), Dhanbad Department of Chemistry and Chemical Biology Science BlockDepartment of Chemistry and Chemical Biology 826004 Dhanbad INDIA
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91
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Spatiotemporal Distribution Pattern of Phytoplankton Community and Its Main Driving Factors in Dongting Lake, China—A Seasonal Study from 2017 to 2019. WATER 2022. [DOI: 10.3390/w14111674] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
As it is the second-largest freshwater lake downstream of the Three Gorges Dam and an important international wetland for migratory birds, there have been concerns about the ecological water health of Dongting Lake for a long time. In the present study, we studied the evolutionary characteristics of water quality in Dongting Lake in three recent years. Moreover, the evolution rules and dominant groups of the phytoplankton community were explored, and the major influencing factors of phytoplankton and their distribution were assessed based on the field survey and detection data from 2017 to 2019. The results indicated that the water quality of Dongting Lake improved in recent years. The concentration of dissolved oxygen (DO) increased by 6.91%, whereas the concentrations of the five-day biochemical oxygen demand (BOD5), chemical oxygen demand (CODCr), ammonia nitrogen (NH4+–N), total phosphorus (TP), and total nitrogen (TN) decreased by 17.5%, 13.0%, 33.8%, 7.6%, and 13.3%, respectively. The mean phytoplankton density reached 4.15 × 105 cells·L−1 in September 2017, whereas it was only 1.62 × 105 cells·L−1 in December 2018. There were 15 dominant species belonging to Cyanobacteria, Chlorophyta, Bacillariophyta, Cryptophyta, and Miozoa. Moreover, Fragilaria radians (Kützing) D.M.Williams & Round and Aulacoseiragranulata (Ehrenberg) Simonsen were the dominant populations in all seasons. The Pearson and linear regression analysis also indicated that the composition and distribution of phytoplankton in Dongting Lake were mainly affected by electrical conductivity (Cond), BOD5, potassium permanganate (CODMn), and CODCr, especially in Eastern Dongting Lake. Of course, NH4+–N, TN, and TP were also the main factors affecting the density and species of the phytoplankton community, especially in Western Dongting Lake. Finally, we suggested that local government could take “The relationship between Yangtze River and Dongting Lake”, “The relationship between the seven fed rivers and Dongting Lake”, and “The relationship between human activities and Dongting Lake” as the breakthrough points to guarantee the ecological flow, water environment, and ecological quality of Dongting Lake.
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92
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Yocum CF. Photosystem 2 and the oxygen evolving complex: a brief overview. PHOTOSYNTHESIS RESEARCH 2022; 152:97-105. [PMID: 35294671 DOI: 10.1007/s11120-022-00910-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Accepted: 02/28/2022] [Indexed: 06/14/2023]
Abstract
These special issues of photosynthesis research present papers documenting progress in revealing the many aspects of photosystem 2, a unique, one-of-a-kind complex system that can reduce a plastoquinone to a plastoquinol on every second flash of light and oxidize 2 H2O to an O2 on every fourth flash. This overview is a brief personal assessment of the progress observed by the author over a four-decade research career, including a discussion of some remaining unsolved issues. It will come as no surprise to readers that there are remaining questions given the complexity of PS2, and the efforts that have been needed so far to uncover its secrets. In fact, most readers will have their own lists of outstanding questions.
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Affiliation(s)
- Charles F Yocum
- Department of Molecular, Cellular and Developmental Biology, University of Michigan, Ann Arbor, MI, 48109, USA.
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93
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Gabr A, Zournas A, Stephens TG, Dismukes GC, Bhattacharya D. Evidence for a robust photosystem II in the photosynthetic amoeba Paulinella. THE NEW PHYTOLOGIST 2022; 234:934-945. [PMID: 35211975 DOI: 10.1111/nph.18052] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2021] [Accepted: 02/06/2022] [Indexed: 06/14/2023]
Abstract
Paulinella represents the only known case of an independent primary plastid endosymbiosis, outside Archaeplastida, that occurred c. 120 (million years ago) Ma. These photoautotrophs grow very slowly in replete culture medium with a doubling time of 6-7 d at optimal low light, and are highly sensitive to photodamage under moderate light levels. We used genomic and biophysical methods to investigate the extreme slow growth rate and light sensitivity of Paulinella, which are key to photosymbiont integration. All photosystem II (PSII) genes except psb28-2 and all cytochrome b6 f complex genes except petM and petL are present in Paulinella micropora KR01 (hereafter, KR01). Biophysical measurements of the water oxidation complex, variable chlorophyll fluorescence, and photosynthesis-irradiance curves show no obvious evidence of PSII impairment. Analysis of photoacclimation under high-light suggests that although KR01 can perform charge separation, it lacks photoprotection mechanisms present in cyanobacteria. We hypothesize that Paulinella species are restricted to low light environments because they are deficient in mitigating the formation of reactive oxygen species formed within the photosystems under peak solar intensities. The finding that many photoprotection genes have been lost or transferred to the host-genome during endosymbiont genome reduction, and may lack light-regulation, is consistent with this hypothesis.
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Affiliation(s)
- Arwa Gabr
- Graduate Program in Molecular Bioscience and Program in Microbiology and Molecular Genetics, Rutgers University, Nelson Lab-604 Allison Road, Piscataway, NJ, 08854, USA
| | - Apostolos Zournas
- Graduate Program in Chemical and Biochemical Engineering, Rutgers University, 98 Brett Road, Piscataway, NJ, 08854, USA
- The Waksman Institute, Rutgers University, 190 Frelinghuysen Road, Piscataway, NJ, 08854, USA
| | - Timothy G Stephens
- Department of Biochemistry and Microbiology, Rutgers University, Lipman Drive, New Brunswick, NJ, 08901, USA
| | - G Charles Dismukes
- The Waksman Institute, Rutgers University, 190 Frelinghuysen Road, Piscataway, NJ, 08854, USA
- Department of Chemistry and Chemical Biology, Rutgers University, 123 Bevier Road, Piscataway, NJ, 08854, USA
| | - Debashish Bhattacharya
- Department of Biochemistry and Microbiology, Rutgers University, Lipman Drive, New Brunswick, NJ, 08901, USA
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94
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Sirohiwal A, Pantazis DA. The Electronic Origin of Far-Red-Light-Driven Oxygenic Photosynthesis. Angew Chem Int Ed Engl 2022; 61:e202200356. [PMID: 35142017 PMCID: PMC9304563 DOI: 10.1002/anie.202200356] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Indexed: 12/19/2022]
Abstract
Photosystem‐II uses sunlight to trigger charge separation and catalyze water oxidation. Intrinsic properties of chlorophyll a pigments define a natural “red limit” of photosynthesis at ≈680 nm. Nevertheless, charge separation can be triggered with far‐red photons up to 800 nm, without altering the nature of light‐harvesting pigments. Here we identify the electronic origin of this remarkable phenomenon using quantum chemical and multiscale simulations on a native Photosystem‐II model. We find that the reaction center is preorganized for charge separation in the far‐red region by specific chlorophyll–pheophytin pairs, potentially bypassing the light‐harvesting apparatus. Charge transfer can occur along two distinct pathways with one and the same pheophytin acceptor (PheoD1). The identity of the donor chlorophyll (ChlD1 or PD1) is wavelength‐dependent and conformational dynamics broaden the sampling of the far‐red region by the two charge‐transfer states. The two pathways rationalize spectroscopic observations and underpin designed extensions of the photosynthetically active radiation limit.
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Affiliation(s)
- Abhishek Sirohiwal
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470, Mülheim an der Ruhr, Germany
| | - Dimitrios A Pantazis
- Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, 45470, Mülheim an der Ruhr, Germany
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95
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Hernández-Prieto MA, Hiller R, Chen M. Chlorophyll f can replace chlorophyll a in the soluble antenna of dinoflagellates. PHOTOSYNTHESIS RESEARCH 2022; 152:13-22. [PMID: 34988868 DOI: 10.1007/s11120-021-00890-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2021] [Accepted: 11/29/2021] [Indexed: 06/14/2023]
Abstract
Chlorophyll f is a new type of chlorophyll isolated from cyanobacteria. The absorption and fluorescence characteristics of chlorophyll f permit these oxygenic-photosynthetic organisms to thrive in environments where white light is scarce but far-red light is abundant. To explore the ligand properties of chlorophyll f and its energy transfer profiles we established two different in vitro reconstitution systems. The reconstituted peridinin-chlorophyll f protein complex (chlorophyll f-PCP) showed a stoichiometry ratio of 4:1 between peridinin and chlorophyll f, consistent with the peridinin:chlorophyll a ratio from native PCP complexes. Using emission wavelength at 712 nm, the excitation fluorescence featured a broad peak at 453 nm and a shoulder at 511 nm confirming energy transfer from peridinin to chlorophyll f. In addition, by using a synthetic peptide mimicking the first transmembrane helix of light-harvesting chlorophyll proteins of plants, we report that chlorophyll f, similarly to chlorophyll b, did not interact with the peptide contrarily to chlorophyll a, confirming the accessory role of chlorophyll f in photosystems. The binding of chlorophyll f, even in the presence of chlorophylls a and b, by PCP complexes shows the flexibility of chlorophyll-protein complexes and provides an opportunity for the introduction of new chlorophyll species to extend the photosynthetic spectral range.
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Affiliation(s)
| | - Roger Hiller
- Faculty of Science and Engineering, Macquarie University, Sydney, NSW, 2109, Australia
| | - Min Chen
- School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, 2006, Australia.
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96
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Biomimetic and Biological Nanoarchitectonics. Int J Mol Sci 2022; 23:ijms23073577. [PMID: 35408937 PMCID: PMC8998553 DOI: 10.3390/ijms23073577] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 03/21/2022] [Accepted: 03/24/2022] [Indexed: 12/13/2022] Open
Abstract
A post-nanotechnology concept has been assigned to an emerging concept, nanoarchitectonics. Nanoarchitectonics aims to establish a discipline in which functional materials are fabricated from nano-scale components such as atoms, molecules, and nanomaterials using various techniques. Nanoarchitectonics opens ways to form a more unified paradigm by integrating nanotechnology with organic chemistry, supramolecular chemistry, material chemistry, microfabrication technology, and biotechnology. On the other hand, biological systems consist of rational organization of constituent molecules. Their structures have highly asymmetric and hierarchical features that allow for chained functional coordination, signal amplification, and vector-like energy and signal flow. The process of nanoarchitectonics is based on the premise of combining several different processes, which makes it easier to obtain a hierarchical structure. Therefore, nanoarchitectonics is a more suitable methodology for creating highly functional systems based on structural asymmetry and hierarchy like biosystems. The creation of functional materials by nanoarchitectonics is somewhat similar to the creation of functional systems in biological systems. It can be said that the goal of nanoarchitectonics is to create highly functional systems similar to those found in biological systems. This review article summarizes the synthesis of biomimetic and biological molecules and their functional structure formation from various viewpoints, from the molecular level to the cellular level. Several recent examples are arranged and categorized to illustrate such a trend with sections of (i) synthetic nanoarchitectonics for bio-related units, (ii) self-assembly nanoarchitectonics with bio-related units, (iii) nanoarchitectonics with nucleic acids, (iv) nanoarchitectonics with peptides, (v) nanoarchitectonics with proteins, and (vi) bio-related nanoarchitectonics in conjugation with materials.
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97
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Ariga K, Fakhrullin R. Materials Nanoarchitectonics from Atom to Living Cell: A Method for Everything. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2022. [DOI: 10.1246/bcsj.20220071] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
| | - Rawil Fakhrullin
- Institute of Fundamental Medicine and Biology, Kazan Federal University, Kreml uramı 18, Kazan, 42000, Republic of Tatarstan, Russian Federation
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98
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Chen C, Xu B, Yao R, Chen Y, Zhang C. Synthesizing Mechanism of the Mn 4 Ca Cluster Mimicking the Oxygen-Evolving Center in Photosynthesis. CHEMSUSCHEM 2022; 15:e202102661. [PMID: 35075776 DOI: 10.1002/cssc.202102661] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2021] [Revised: 01/19/2022] [Indexed: 06/14/2023]
Abstract
The photosynthetic oxygen-evolving center (OEC) is a unique Mn4 CaO5 cluster that serves as a blueprint to develop superior water-splitting catalysts for the generation of solar fuels in artificial photosynthesis. It is a great challenge and long-standing issue to reveal the synthesizing mechanism of this Mn4 CaO5 cluster in both natural and artificial photosynthesis. Herein, efforts were made to reveal the synthesizing mechanism of an artificial Mn4 CaO4 cluster, a close mimic of the OEC. Four key intermediates were successfully isolated and structurally characterized for the first time. It was demonstrated that the Mn4 CaO4 cluster could be formed through a reaction between a thermodynamically stable Mn3 CaO4 cluster and an unusual four-coordinated MnIII ion, followed by stabilization process through binding an organic base (e.g., pyridine) on the "dangling" Mn ion. These findings shed new light on the synthesizing mechanism of the OEC and rational design of new artificial water-splitting catalysts.
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Affiliation(s)
- Changhui Chen
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
| | - Boran Xu
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Ruoqing Yao
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Yang Chen
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
- University of Chinese Academy of Sciences, Beijing, 100049, P. R. China
| | - Chunxi Zhang
- Laboratory of Photochemistry, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P. R. China
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99
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Search for Structurally Resembled Mn/Ca Cubane Core of the Oxygen Evolving Complex of Photosystem II Yielded MnIV, MnIII3MnII and MnIII2CaII2 Entities: Structure and Magnetism. Eur J Inorg Chem 2022. [DOI: 10.1002/ejic.202200058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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100
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Zhou A, Cao X, Chen H, Sun D, Zhao Y, Nam W, Wang Y. The chameleon-like nature of elusive cobalt-oxygen intermediates in C-H bond activation reactions. Dalton Trans 2022; 51:4317-4323. [PMID: 35212349 DOI: 10.1039/d2dt00224h] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
High-valence metal-oxo (M-O, M = Fe, Mn, etc.) species are well-known reaction intermediates that are responsible for a wide range of pivotal oxygenation reactions and water oxidation reactions in metalloenzymes. Although extensive efforts have been devoted to synthesizing and identifying such complexes in biomimetic studies, the structure-function relationship and related reaction mechanisms of these reaction intermediates remain elusive, especially for the cobalt-oxygen species. In the present manuscript, the calculated results demonstrate that the tetraamido macrocycle ligated cobalt complex, Co(O)(TAML) (1), behaves like a chameleon: the electronic structure varies from a cobalt(III)-oxyl species to a cobalt(IV)-oxo species when a Lewis acid Sc3+ salt coordinates or an acidic hydrocarbon attacks 1. The dichotomous correlation between the reaction rates of C-H bond activation by 1 and the bond dissociation energy (BDE) vs. the acidity (pKa) was rationalized for the first time by different reaction mechanisms: for normal C-H bond activation, the Co(III)-oxyl species directly activates the C-H bond via a hydrogen atom transfer (HAT) mechanism, whereas for acidic C-H bond activation, the Co(III)-oxyl species evolves to a Co(IV)-oxo species to increase the basicity of the oxygen to activate the acidic C-H bond, via a novel PCET(PT) mechanism (proton-coupled electron transfer with a PT(proton-transfer)-like transition state). These theoretical findings will enrich the knowledge of biomimetic metal-oxygen chemistry.
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Affiliation(s)
- Anran Zhou
- Institute of Drug Discovery Technology, Ningbo University, Ningbo 315211, China. .,Qian Xuesen Collaborative Research Center of Astrochemistry and Space Life Sciences, Ningbo University, Ningbo 315211, China
| | - Xuanyu Cao
- Institute of Drug Discovery Technology, Ningbo University, Ningbo 315211, China. .,Qian Xuesen Collaborative Research Center of Astrochemistry and Space Life Sciences, Ningbo University, Ningbo 315211, China
| | - Huanhuan Chen
- Institute of Drug Discovery Technology, Ningbo University, Ningbo 315211, China. .,Qian Xuesen Collaborative Research Center of Astrochemistry and Space Life Sciences, Ningbo University, Ningbo 315211, China
| | - Dongru Sun
- Institute of Drug Discovery Technology, Ningbo University, Ningbo 315211, China. .,Qian Xuesen Collaborative Research Center of Astrochemistry and Space Life Sciences, Ningbo University, Ningbo 315211, China
| | - Yufen Zhao
- Institute of Drug Discovery Technology, Ningbo University, Ningbo 315211, China. .,Qian Xuesen Collaborative Research Center of Astrochemistry and Space Life Sciences, Ningbo University, Ningbo 315211, China
| | - Wonwoo Nam
- Department of Chemistry and Nano Science, Ewha Womans University, Seoul 03760, Korea.
| | - Yong Wang
- Institute of Drug Discovery Technology, Ningbo University, Ningbo 315211, China. .,Qian Xuesen Collaborative Research Center of Astrochemistry and Space Life Sciences, Ningbo University, Ningbo 315211, China
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