Ecosystem carbon loss with woody plant invasion of grasslands

Multiscale analysis of tree cover and aboveground carbon stocks in pinyon-juniper woodlands

Regional, high-resolution mapping of vegetation cover and biomass is central to understanding changes to the terrestrial carbon (C) cycle, especially in the context of C management. The third most extensive vegetation type in the United States is pinyon-juniper (P-J) woodland, yet the spatial patterns of tree cover and aboveground biomass (AGB) of P-J systems are poorly quantified. We developed a synoptic remote-sensing approach to scale up pinyon and juniper projected cover (hereafter "cover") and AGB field observations from plot to regional levels using fractional photosynthetic vegetation (PV) cover derived from airborne imaging spectroscopy and Landsat satellite data. Our results demonstrated strong correlations (P < 0.001) between field cover and airborne PV estimates (r2 = 0.92), and between airborne and satellite PV estimates (r2 = 0.61). Field data also indicated that P-J AGB can be estimated from canopy cover using a unified allometric equation (r2 = 0.69; P < 0.001). Using these multiscale cover-AGB relationships, we developed high-resolution, regional maps of P-J cover and AGB for the western Colorado Plateau. The P-J cover was 27.4% +/- 9.9% (mean +/- SD), and the mean aboveground woody C converted from AGB was 5.2 +/- 2.0 Mg C/ha. Combining our data with the southwest Regional Gap Analysis Program vegetation map, we estimated that total contemporary woody C storage for P-J systems throughout the Colorado Plateau (113 600 km2) is 59.0 +/- 22.7 Tg C. Our results show how multiple remote-sensing observations can be used to map cover and C stocks at high resolution in drylands, and they highlight the role of P-J ecosystems in the North American C budget.

Seasonal changes in depth of water uptake for encroaching trees Juniperus virginiana and Pinus ponderosa and two dominant C4 grasses in a semiarid grassland

We used the natural abundance of stable isotopic ratios of hydrogen and oxygen in soil (0.05-3 m depth), plant xylem and precipitation to determine the seasonal changes in sources of soil water uptake by two native encroaching woody species (Pinus ponderosa P. & C. Lawson, Juniperus virginiana L.), and two C(4) grasses (Schizachyrium scoparium (Michx.) Nash, Panicum virgatum L.), in the semiarid Sandhills grasslands of Nebraska. Grass species extracted most of their water from the upper soil profile (0.05-0.5 m). Soil water uptake from below 0.5 m depth increased under drought, but appeared to be minimal in relation to the total water use of these species. The grasses senesced in late August in response to drought conditions. In contrast to grasses, P. ponderosa and J. virginiana trees exhibited significant plasticity in sources of water uptake. In winter, tree species extracted a large fraction of their soil water from below 0.9 m depth. In spring when shallow soil water was available, tree species used water from the upper soil profile (0.05-0.5 m) and relied little on water from below 0.5 m depth. During the growing season (May-August) significant differences between the patterns of tree species water uptake emerged. Pinus ponderosa acquired a large fraction of its water from the 0.05-0.5 and 0.5-0.9 m soil profiles. Compared with P. ponderosa, J. virginiana acquired water from the 0.05-0.5 m profile during the early growing season but the amount extracted from this profile progressively declined between May and August and was mirrored by a progressive increase in the fraction taken up from 0.5-0.9 m depth, showing plasticity in tracking the general increase in soil water content within the 0.5-0.9 m profile, and being less responsive to growing season precipitation events. In September, soil water content declined to its minimum, and both tree species shifted soil water uptake to below 0.9 m. Tree transpiration rates (E) and water potentials (Psi) indicated that deep water sources did not maintain E which sharply declined in September, but played an important role in the recovery of tree Psi. Differences in sources of water uptake among these species and their ecological implications on tree-grass dynamics and soil water in semiarid environments are discussed.

Grazers, browsers, and fire influence the extent and spatial pattern of tree cover in the Serengeti

Vertebrate herbivores and fire are known to be important drivers of vegetation dynamics in African savannas. It is of particular importance to understand how changes in herbivore population density, especially of elephants, and fire frequency will affect the amount of tree cover in savanna ecosystems, given the critical importance of tree cover for biodiversity, ecosystem function, and human welfare. We developed a spatially realistic simulation model of vegetation, fire, and dominant herbivore dynamics, tailored to the Serengeti ecosystem of east Africa. The model includes key processes such as tree-grass competition, fire, and resource-based density dependence and adaptive movement by herbivores. We used the model to project the ecosystem 100 years into the future from its present state under different fire, browsing (determined by elephant population density), and grazing (with and without wildebeest present) regimes. The model produced the following key results: (1) elephants and fire exert synergistic negative effects on woody cover; when grazers are excluded, the impact of fire and the strength of the elephant-fire interaction increase; (2) at present population densities of 0.15 elephants/km2, the total amount of woody cover is predicted to remain stable in the absence of fire, but the mature tree population is predicted to decline regardless of the fire regime; without grazers present to mitigate the effects of fire, the size structure of the tree population will become dominated by seedlings and mature trees; (3) spatial heterogeneity in tree cover varies unimodally with elephant population density; fire increases heterogeneity in the presence of grazers and decreases it in their absence; (4) the marked rainfall gradient in the Serengeti directly affects the pattern of tree cover in the absence of fire; with fire, the woody cover is determined by the grazing patterns of the migratory wildebeest, which are partly rainfall driven. Our results show that, in open migratory ecosystems such as the Serengeti, grazers can modulate the impact of fire and the strength of the interaction between fire and browsers by altering fuel loads and responding to the distribution of grass across the landscape, and thus exert strong effects on spatial patterns of tree cover.

Long-term Satellite NDVI Data Sets: Evaluating Their Ability to Detect Ecosystem Functional Changes in South America

In the last decades, South American ecosystems underwent important functional modifications due to climate alterations and direct human intervention on land use and land cover. Among remotely sensed data sets, NOAA-AVHRR “Normalized Difference Vegetation Index” (NDVI) represents one of the most powerful tools to evaluate these changes thanks to their extended temporal coverage. In this paper we explored the possibilities and limitations of three commonly used NOAA-AVHRR NDVI series (PAL, GIMMS and FASIR) to detect ecosystem functional changes in the South American continent. We performed pixel-based linear regressions for four NDVI variables (average annual, maximum annual, minimum annual and intra-annual coefficient of variation) for the 1982-1999 period and (1) analyzed the convergences and divergences of significant multi-annual trends identified across all series, (2) explored the degree of aggregation of the trends using the O-ring statistic, and (3) evaluated observed trends using independent information on ecosystem functional changes in five focal regions. Several differences arose in terms of the patterns of change (the sign, localization and total number of pixels with changes). FASIR presented the highest proportion of changing pixels (32.7%) and GIMMS the lowest (16.2%). PAL and FASIR data sets showed the highest agreement, with a convergence of detected trends on 71.2% of the pixels. Even though positive and negative changes showed substantial spatial aggregation, important differences in the scale of aggregation emerged among the series, with GIMMS showing the smaller scale (≤11 pixels). The independent evaluations suggest higher accuracy in the detection of ecosystem changes among PAL and FASIR series than with GIMMS, as they detected trends that match expected shifts. In fact, this last series eliminated most of the long term patterns over the continent. For example, in the “Eastern Paraguay” and “Uruguay River margins” focal regions, the extensive changes due to land use and land cover change expansion were detected by PAL and FASIR, but completely ignored by GIMMS. Although the technical explanation of the differences remains unclear and needs further exploration, we found that the evaluation of this type of remote sensing tools should not only be focused at the level of assumptions (i.e. physical or mathematical aspects of image processing), but also at the level of results (i.e. contrasting observed patterns with independent proofs of change). We finally present the online collaborative initiative “Land ecosystem change utility for South America”, which facilitates this type of evaluations and helps to identify the most important functional changes of the continent.

Carbon storage of different soil-size fractions in Florida silvopastoral systems

Compared with open (treeless) pasture systems, silvopastoral agroforestry systems that integrate trees into pasture production systems are likely to enhance soil carbon (C) sequestration in deeper soil layers. To test this hypothesis, total soil C contents at six soil depths (0-5, 5-15, 15-30, 30-50, 50-75, and 75-125 cm) were determined in silvopastoral systems with slash pine (Pinus elliottii) + bahiagrass (Paspalum notatum) and an adjacent open pasture (OP) with bahiagrass at four sites, representing Spodosols and Ultisols, in Florida. Soil samples from each layer were fractionated into three classes (250-2000, 53-250, and <53 microm), and the C contents in each were determined. Averaged across four sites and all depths, the total soil organic carbon (SOC) content was higher by 33% in silvopastures near trees (SP-T) and by 28% in the alleys between tree rows (SP-A) than in adjacent open pastures. It was higher by 39% in SP-A and 20% in SP-T than in open pastures in the largest fraction size (250-2000 microm) and by 12.3 and 18.8%, respectively, in the intermediate size fraction (53-250 microm). The highest SOC increase (up to 45 kg m(-2)) in whole soil of silvopasture compared with OP was at the 75- to 125-cm depth at the Spodosol sites. The results support the hypothesis that, compared with open pastures, silvopastures contain more C in deeper soil layers under similar ecological settings, possibly as a consequence of a major input to soil organic matter from decomposition of dead tree-roots.

Shrub invasion decreases diversity and alters community stability in northern Chihuahuan Desert plant communities

Background

Global climate change is rapidly altering species range distributions and interactions within communities. As ranges expand, invading species change interactions in communities which may reduce stability, a mechanism known to affect biodiversity. In aridland ecosystems worldwide, the range of native shrubs is expanding as they invade and replace native grassland vegetation with significant consequences for biodiversity and ecosystem functioning.

Methodology

We used two long-term data sets to determine the effects of shrub encroachment by Larrea tridentata on subdominant community composition and stability in formerly native perennial grassland dominated by Bouteloua eriopoda in New Mexico, USA.

Principal Findings

Our results indicated that Larrea invasion decreased species richness during the last 100 years. We also found that over shorter temporal scales species-poor subdominant communities in areas invaded by Larrea were less stable (more variable in time) compared to species rich communities in grass-dominated vegetation. Compositional stability increased as cover of Bouteloua increased and decreased as cover of Larrea increased.

Significance

Changes in community stability due to altered interspecific interactions may be one mechanism by which biodiversity declines in grasslands following shrub invasion. As global warming increases, shrub encroachment into native grasslands worldwide will continue to alter species interactions and community stability both of which may lead to a decline in biodiversity.

Estimation of biomass and carbon stocks: the case of the Atlantic Forest

The main objective of this paper is to present and discuss the best methods to estimate live above ground biomass in the Atlantic Forest. The methods presented and conclusions are the products of a workshop entitled "Estimation of Biomass and Carbon Stocks: the Case of Atlantic Rain Forest". Aboveground biomass (AGB) in tropical forests is mainly contained in trees. Tree biomass is a function of wood volume, obtained from the diameter and height, architecture and wood density (dry weight per unit volume of fresh wood). It can be quantified by the direct (destructive) or indirect method where the biomass quantification is estimated using mathematical models. The allometric model can be site specific when elaborated to a particular ecosystem or general that can be used in different sites. For the Atlantic Forest, despite the importance of it, there are only two direct measurements of tree biomass, resulting in allometric models specific for this ecosystem. To select one or other of the available models in the literature to estimate AGB it is necessary take into account what is the main question to be answered and the ease with which it is possible to measure the independent variables in the model. Models that present more accurate estimates should be preferred. However, more simple models (those with one independent variable, usually DBH) can be used when the focus is monitoring the variation in carbon storage through the time. Our observations in the Atlantic Forest suggest that pan-tropical relations proposed by Chave et al. (2005) can be confidently used to estimated tree biomass across biomes as long as tree diameter (DBH), height, and wood density are accounted for in the model. In Atlantic Forest, we recommend the quantification of biomass of lianas, bamboo, palms, tree ferns and epiphytes, which are an important component in this ecosystem. This paper is an outcome of the workshop entitled "Estimation of Biomass and Carbon Stocks: the Case of Atlantic Rain Forest", that was conducted at Ubatuba, São Paulo, Brazil, between 4 and 8 December 2006 as part of the Brazilian project "Ombrophylus Dense Forest floristic composition, structure and function at the Núcleos Picinguaba and Santa Virginia of the Serra do Mar State Park", BIOTA Gradiente.

Use of carbon isotope analysis to understand semi-arid erosion dynamics and long-term semi-arid land degradation

Many semi-arid areas worldwide are becoming degraded, in the form of C(4) grasslands being replaced by C(3) shrublands, which causes an increase in surface runoff and erosion, and altered nutrient cycling, which may affect global biogeochemical cycling. The prevention or control of vegetation transitions is hindered by a lack of understanding of their temporal and spatial dynamics, particularly in terms of interactions between biotic and abiotic processes. This research investigates (1) the effects of soil erosion on the delta(13)C values of soil organic matter (SOM) throughout the soil profile and its implications for reconstructing vegetation change using carbon-isotope analysis and (2) the spatial properties of erosion over a grass-shrub transition to increase understanding of biotic-abiotic interactions by using delta(13)C signals of eroded material as a sediment tracer. Results demonstrate that the soils over grass-shrub transitions are not in steady state. A complex interplay of factors determines the input of SOM to the surface horizon of the soil and its subsequent retention and turnover through the soil profile. A positive correlation between event runoff and delta(13)C signatures of eroded sediment was found in all plots. This indicates that the delta(13)C signatures of eroded sediment may provide a means of distinguishing between changes in erosion dynamics over runoff events of different magnitudes and over different vegetation types. The development of this technique using delta(13)C signatures of eroded sediment provides a new means of furthering existing understanding of erosion dynamics over vegetation transitions. This is critical in terms of understanding biotic-abiotic feedbacks and the evolution of areas subject to vegetation change in semi-arid environments.

Invasive species change detection using artificial neural networks and CASI hyperspectral imagery

For monitoring and controlling the extent and intensity of an invasive species, a direct multi-date image classification method was applied in invasive species (salt cedar) change detection in the study area of Lovelock, Nevada. With multidate Compact Airborne Spectrographic Imager (CASI) hyperspectral data sets, two types of hyperspectral CASI input data and two classifiers have been examined and compared for mapping and monitoring the salt cedar change. The two types of input data are all two-date original CASI bands and 12 principal component images (PCs) derived from the two-date CASI images. The two classifiers are an artificial neural network (ANN) and linear discriminant analysis (LDA). The experimental results indicate that (1) the direct multitemporal image classification method applied in land cover change detection is feasible either with original CASI bands or PCs, but a better accuracy was obtained from the CASI PCA transformed data; (2) with the same inputs of 12 PCs, the ANN outperforms the LDA due to the ANN's non-linear property and ability of handling data without a prerequisite of a certain distribution of the analysis data.

Hydraulic traits are influenced by phylogenetic history in the drought-resistant, invasive genus Juniperus (Cupressaceae)

In the conifer genus Juniperus (Cupressaceae), many species are increasing rapidly in distribution, abundance, and dominance in arid and semiarid regions. To help understand the success of junipers in drier habitats, we studied hydraulic traits associated with their water stress resistance, including vulnerability to xylem cavitation, specific conductivity (K(S)), tracheid diameter, conduit reinforcement, and wood density in stems and roots, as well as specific leaf area (SLA) of 14 species from the United States and the Caribbean. A new phylogeny based on DNA sequences tested the relationships between vulnerability to cavitation and other traits using both traditional cross-species correlations and independent contrast correlations. All species were moderately to highly resistant to water-stress-induced cavitation in both roots and shoots. We found strong phylogenetic support for two clades previously based on leaf margin serration (serrate and smooth). Species in the serrate clade were 34-39% more resistant to xylem cavitation in stems and roots than were species in the smooth clade and had ∼35% lower K(S) and 39% lower SLA. Root and stem resistance to cavitation and SLA were all highly conserved traits. A high degree of conservation within clades suggests that hydraulic traits of Juniperus species strongly reflect phylogenetic history. The high resistance to cavitation observed may help explain the survival of junipers during recent extreme droughts in the southwestern United States and their expansion into arid habitats across the western and central United States.

Implications of a large global root biomass for carbon sink estimates and for soil carbon dynamics

Recent evidence suggests that significantly more plant carbon (C) is stored below ground than existing estimates indicate. This study explores the implications for biome C pool sizes and global C fluxes. It predicts a root C pool of at least 268 Pg, 68% larger than previously thought. Although still a low-precision estimate (owing to the uncertainties of biome-scale measurements), a global root C pool this large implies stronger land C sinks, particularly in tropical and temperate forests, shrubland and savanna. The land sink predicted from revised C inventories is 2.7 Pg yr(-1). This is 0.1 Pg yr(-1) larger than current estimates, within the uncertainties associated with global C fluxes, but conflicting with a smaller sink (2.4 Pg yr(-1)) estimated from C balance. Sink estimates derived from C inventories and C balance match, however, if global soil C is assumed to be declining by 0.4-0.7% yr(-1), rates that agree with long-term regional rates of soil C loss. Either possibility, a stronger land C sink or widespread soil C loss, argues that these features of the global C cycle should be reassessed to improve the accuracy and precision of C flux and pool estimates at both global and biome scales.

Shifts in litterfall and dominant nitrogen sources after expansion of shrub thickets

Woody encroachment into herbaceous ecosystems is emerging as an important ecological response to global change. A primary concern is alterations in C and N cycling and associated variations across a variety of ecosystems. We quantified seasonal variation in litterfall and litter N concentration in Morella cerifera shrub thickets to assess changes in litterfall and associated N input after shrub expansion on an Atlantic coast barrier island. We also used the natural abundance of (15)N to estimate the proportion of litterfall N originating from symbiotic N fixation. Litterfall for shrub thickets ranged from 8,991 +/- 247 to 3,810 +/- 399 kg ha(-1) year(-1) and generally declined with increasing thicket age. Litterfall in three of the four thickets exceeded previous estimates of aboveground annual net primary production in adjacent grasslands by 300-400%. Leaf N concentration was also higher after shrub expansion and, coupled with low N resorption efficiency and high litterfall, resulted in a return of as much as 169 kg N ha(-1) year(-1) to the soil. We estimated that approximately 70% of N returned to the soil was from symbiotic N fixation resulting in an ecosystem input of between 37 and 118 kg ha(-1) year(-1) of atmospheric N depending on site. Considering the extensive cover of shrub thickets on Virginia barrier islands, N fixation by shrubs is likely the largest single source of N to the system. The shift from grassland to shrub thicket on barrier islands results in a substantial increase in litterfall and foliar N concentration that will likely have a major impact on the size and cycling of ecosystem C and N pools. Increasing C and N availability in these nutrient-poor soils is likely to permanently reduce cover of native grasses and alter community structure by favoring species with greater N requirements.

Altered ecosystem carbon and nitrogen cycles by plant invasion: a meta-analysis

Plant invasion potentially alters ecosystem carbon (C) and nitrogen (N) cycles. However, the overall direction and magnitude of such alterations are poorly quantified. Here, 94 experimental studies were synthesized, using a meta-analysis approach, to quantify the changes of 20 variables associated with C and N cycles, including their pools, fluxes, and other related parameters in response to plant invasion. Pool variables showed significant changes in invaded ecosystems relative to native ecosystems, ranging from a 5% increase in root carbon stock to a 133% increase in shoot C stock. Flux variables, such as above-ground net primary production and litter decomposition, increased by 50-120% in invaded ecosystems, compared with native ones. Plant N concentration, soil NH+4 and NO-3 concentrations were 40, 30 and 17% higher in invaded than in native ecosystems, respectively. Increases in plant production and soil N availability indicate that there was positive feedback between plant invasion and C and N cycles in invaded ecosystems. Invasions by woody and N-fixing plants tended to have greater impacts on C and N cycles than those by herbaceous and nonN-fixing plants, respectively. The responses to plant invasion are not different among forests, grasslands, and wetlands. All of these changes suggest that plant invasion profoundly influences ecosystem processes.

Uncertainty in allometric exponent estimation: A case study in scaling metabolic rate with body mass

Many factors could influence the allometric scaling exponent beta estimation, but have not been explored systematically. We investigated the influences of three factors on the estimate of beta based on a data set of 626 species of basal metabolic rate and mass in mammals. The influence of sampling error was tested by re-sampling with different sample sizes using a Monte Carlo method. Small random errors were introduced to measured data to examine their influence on parameter estimations. The influence of analysis method was also evaluated by applying nonlinear and linear regressions to the original data. Results showed that a relative large sample size was required to lower statistical inference errors. When sample size n was 10% of the base population size (n=63), 35% of the samples supported beta=2/3, 39% supported beta=3/4, and 15% rejected beta=0.711, even though the base population had a beta=0.711. The controversy surrounding the estimation of beta in the literature could be partially attributable to such small sample sizes in many studies. Measurement errors in body mass and base metabolic rate, especially in body mass, could largely increase alpha and beta errors. Analysis methods also affected parameter estimations. Nonlinear regressions provided better estimates of the scaling exponent that were significantly higher than these commonly estimated by linear regressions. This study demonstrated the importance of the quantity and quality of data as well as analysis method in power law analysis, raising caution in interpreting power law results. Meta-data synthesis using data from independent studies seems to be a proper approach in the future, but caution should be taken to make sure that such measurements are made using similar protocols.

Promotion of ecosystem carbon sequestration by invasive predators

Despite recent interest in understanding the effects of human-induced global change on carbon (C) storage in terrestrial ecosystems, most studies have overlooked the influence of a major element of global change, namely biological invasions. We quantified ecosystem C storage, both above- and below-ground, on each of 18 islands off the coast of New Zealand. Some islands support high densities of nesting seabirds, while others have been invaded by predatory rats and host few seabirds. Our results show that, by preying upon seabirds, rats have indirectly enhanced C sequestration in live plant biomass by 104%, reduced C sequestration in non-living pools by 26% and increased total ecosystem C storage by 37%. Given the current worldwide distribution of rats and other invasive predatory mammals, and the consequent disappearance of seabird colonies, these predators may be important determinants of ecosystem C sequestration.

Climatic/edaphic controls on soil carbon/nitrogen response to shrub encroachment in desert grassland

The proliferation of woody plants in grasslands over the past 100+ years can alter carbon, nitrogen, and water cycles and influence land surface-atmosphere interactions. Although the majority of organic carbon in these ecosystems resides belowground, there is no consensus on how this change in land cover has affected soil organic carbon (SOC) and total nitrogen (TN) pools. The degree to which duration of woody plant occupation, climate, and edaphic conditions have mediated SOC and TN responses to changes in life-form composition are poorly understood. We addressed these issues at a desert grassland site in Arizona, USA, where the leguminous shrub velvet mesquite (Prosopis velutina) has proliferated along an elevation/precipitation/temperature gradient and on contrasting soil morphologic surfaces. On sandy loam complexes of mid-Holocene origin, mean SOC and TN of soils in the grassland matrix increased approximately 68% and approximately 45%, respectively, with increasing elevation. Soil organic carbon pools were comparable and TN pools were approximately 23% higher in Pleistocene-aged clay loam complexes co-occurring with Holocene-aged soils at the upper elevation/climatic zone. Across the site, belowground resources associated with large Prosopis plants were 21-154% (SOC) and 18-127% (TN) higher than those in the grassy matrix. The variance in SOC and TN pools accounted for by Prosopis stem size (a rough surrogate for time of site occupation) was highest at the low- and mid-elevation sites (69-74%) and lowest at the upper elevation site (32-38%). Soil delta15N values ranged from 5.5 per thousand to 6.7 per thousand across the soil/elevation zones but were comparable in herbaceous and shrub-impacted soils and exhibited a weak relationship with Prosopis basal stem diameter (r2 < 0.1) and TN (r2 < 0.08). The SOC delta13C values decreased linearly with increasing Prosopis basal diameter, suggesting that size and isotopic composition of the SOC pool is a function of time of Prosopis site occupation. Isotopic mixture models indicate that encroachment of C3 woody plants has also promoted SOC additions from C4 plant sources, indicative of long-term herbaceous facilitation. Grassy sites in contrasting soil/elevation combinations, initially highly distinctive in their SOC pool size and delta13C, appear to be converging on similar values following approximately 100 years of woody plant proliferation.

Global negative vegetation feedback to climate warming responses of leaf litter decomposition rates in cold biomes

Whether climate change will turn cold biomes from large long-term carbon sinks into sources is hotly debated because of the great potential for ecosystem-mediated feedbacks to global climate. Critical are the direction, magnitude and generality of climate responses of plant litter decomposition. Here, we present the first quantitative analysis of the major climate-change-related drivers of litter decomposition rates in cold northern biomes worldwide. Leaf litters collected from the predominant species in 33 global change manipulation experiments in circum-arctic-alpine ecosystems were incubated simultaneously in two contrasting arctic life zones. We demonstrate that longer-term, large-scale changes to leaf litter decomposition will be driven primarily by both direct warming effects and concomitant shifts in plant growth form composition, with a much smaller role for changes in litter quality within species. Specifically, the ongoing warming-induced expansion of shrubs with recalcitrant leaf litter across cold biomes would constitute a negative feedback to global warming. Depending on the strength of other (previously reported) positive feedbacks of shrub expansion on soil carbon turnover, this may partly counteract direct warming enhancement of litter decomposition.

The effects of tree establishment on water and salt dynamics in naturally salt-affected grasslands

Plants, by influencing water fluxes across the ecosystem-vadose zone-aquifer continuum, can leave an imprint on salt accumulation and distribution patterns. We explored how the conversion of native grasslands to oak plantations affected the abundance and distribution of salts on soils and groundwater through changes in the water balance in naturally salt-affected landscapes of Hortobagy (Hungary), a region where artificial drainage performed approximately 150 years ago lowered the water table (from -2 to -5 m) decoupling it from the surface ecosystem. Paired soil sampling and detailed soil conductivity transects revealed consistently different salt distribution patterns between grasslands and plantations, with shallow salinity losses and deep salinity gains accompanying tree establishment. Salts accumulated in the upper soil layers during pre-drainage times have remained in drained grasslands but have been flushed away under tree plantations (65 and 83% loss of chloride and sodium, respectively, in the 0 to -0.5 m depth range) as a result of a five- to 25-fold increase in infiltration rates detected under plantations. At greater depth, closer to the current water table level, the salt balance was reversed, with tree plantations gaining 2.5 kg sodium chloride m(-2) down to 6 m depth, resulting from groundwater uptake and salt exclusion by tree roots in the capillary fringe. Diurnal water table fluctuations, detected in a plantation stand but not in the neighbouring grasslands, together with salt mass balances suggest that trees consumed approximately 380 mm groundwater per year, re-establishing the discharge regime and leading to higher salt accumulation rates than those interrupted by regional drainage practices more than a century ago. The strong influences of vegetation changes on water dynamics can have cascading consequences on salt accumulation and distribution, and a broad ecohydrological perspective that explicitly considers vegetation-groundwater links is needed to anticipate and manage them.

Vegetation responses to conifer encroachment in a western Cascade meadow: a chronosequence approach

Conifer invasion of mountain meadows is pervasive in western North America, but its consequences for plant composition and diversity have not been studied. We used a chronosequence approach to reconstruct temporal patterns of vegetation change in response to ~200 years of conifer encroachment of a dry, montane meadow in the western Cascade Range, Oregon. Tree age distributions, forest structure, light, and vegetation composition were determined for three hundred and fifty-six 10 m × 10 m samples representing a gradient from open meadow to old forest (>90 years). Nonmetric multidimensional scaling revealed strong turnover in species composition from open meadow to old forest. Ordination axes were highly correlated with light availability and density/basal area of encroaching grand fir, Abies grandis (Dougl. ex D. Don) Lindl., and lodgepole pine, Pinus contorta Dougl. ex Loud. Cover of meadow species declined steeply with establishment of A. grandis ; richness declined more gradually and extirpations of meadow species were rare. Forest herbs colonized within two decades of tree establishment and within 60–80 years dominated the understory flora. In contrast with meadow species, changes in richness and cover of forest herbs were weakly related to changes in forest structure. Rapid replacement of meadow by forest species and long-term effects of trees on soils may limit potential for restoration of these unique habitats.

Elephants, fire, and frost can determine community structure and composition in Kalahari Woodlands

Fire, elephants, and frost are important disturbance factors in many African savannas, but the relative magnitude of their effects on vegetation and their interactions have not been quantified. Understanding how disturbance shapes savanna structure and composition is critical for predicting changes in tree cover and for formulating management and conservation policy. A simulation model was used to investigate how the disturbance regime determines vegetation structure and composition in a mixed Kalahari sand woodland savanna in western Zimbabwe. The model consisted of submodels for tree growth, tree damage caused by disturbance, mortality, and recruitment that were parameterized from field data collected over a two-year period. The model predicts that, under the current disturbance regime, tree basal area in the study area will decline by two-thirds over the next two decades and become dominated by species unpalatable to elephants. Changes in the disturbance regime are predicted to greatly modify vegetation structure and community composition. Elephants are the primary drivers of woodland change in this community at present-day population densities, and their impacts are exacerbated by the effects of fire and frost. Frost, in particular, does not play an important role when acting independently but appears to be a key secondary factor in the presence of elephants and/or fire. Unlike fire and frost, which cannot suppress the woodland phase on their own in this ecosystem, elephants can independently drive the vegetation to the scrub phase. The results suggest that elephant and fire management may be critical for the persistence of certain woodland communities within dry-season elephant habitats in the eastern Kalahari, particularly those dominated by Brachystegia spiciformis and other palatable species.

Vegetation structure constrains primary production response to water availability in the Patagonian steppe

Grassland aboveground net primary production (ANPP) increases linearly with precipitation in space and time, but temporal models relating time series of ANPP and annual precipitation for single sites show lower slopes and regression coefficients than are shown by spatial models. The analysis of several ANPP time series showed lags in the ecosystem response to increased water availability, which may explain the difference between spatial and temporal models. The lags may result from constraints that ecosystems experience after drought. Our objective was to explore the structural constraints of the ANPP response to rainfall variability in a semiarid ecosystem, the Patagonian steppe, in southern Argentina. We designed a 3-yr rainfall manipulation experiment where we decreased water input with rainout shelters during two consecutive years, which included three levels of rainfall interception (30%, 55%, and 80%) and a control. In the third year, we irrigated one-half of the plots of each rainfall-interception treatment. We evaluated the immediate effects of drought on current-year ANPP and the effects of previous-year drought on vegetation recovery after water supplementation. ANPP (g x m(-2) x yr(-1)) was linearly related to annual precipitation input (APPT; mm/yr) along the experimental precipitation gradient (ANPP = 0.13 x APPT + 58.3; r2 = 0.34, P < 0.01), and this relationship was mostly accounted for by changes in the ANPP of grasses. Plant density (D; no. individuals/mm2) was related to the precipitation received during the drought period (D = 0.11 x APPT + 18; r2 = 0.39, P < 0.05). The recovery of plants after irrigation was lower for those plots that had experienced experimental drought the previous years relative to controls, and the lags were proportional to the intensity of drought. Therefore, our results suggest that the density of plants may constrain the recovery of vegetation after drought, and these constraints may determine lags that limit the capacity of the ecosystem to take advantage of wet years after dry years.

The sensitivity of ecosystem carbon exchange to seasonal precipitation and woody plant encroachment

Ongoing, widespread increases in woody plant abundance in historical grasslands and savannas (woody encroachment) likely will interact with future precipitation variability to influence seasonal patterns of carbon cycling in water-limited regions. To characterize the effects of woody encroachment on the sensitivity of ecosystem carbon exchange to seasonal rainfall in a semi-arid riparian setting we used flux-duration analysis to compare 2003-growing season NEE data from a riparian grassland and shrubland. Though less seasonally variable than the grassland, shrubland NEE was more responsive to monsoon rains than anticipated. During the 2004-growing season we measured leaf gas exchange and collected leaf tissue for delta(13)C and nitrogen content analysis periodically among three size classes of the dominant woody-plant, Prosopis velutina and the dominant understory species, Sporobolus wrightii, a C(4) bunchgrass, present at the shrubland. We observed size-class and plant functional type independent patterns of seasonal plant performance consistent with greater-than-anticipated sensitivity of NEE in the shrubland. This research highlights the complex interaction between growing-season precipitation, plant-available alluvial groundwater and woody plant abundance governing ecosystem carbon balance in this semi-arid watershed.

Plant litter decomposition in a semi-arid ecosystem controlled by photodegradation

The carbon balance in terrestrial ecosystems is determined by the difference between inputs from primary production and the return of carbon to the atmosphere through decomposition of organic matter. Our understanding of the factors that control carbon turnover in water-limited ecosystems is limited, however, as studies of litter decomposition have shown contradictory results and only a modest correlation with precipitation. Here we evaluate the influence of solar radiation, soil biotic activity and soil resource availability on litter decomposition in the semi-arid Patagonian steppe using the results of manipulative experiments carried out under ambient conditions of rainfall and temperature. We show that intercepted solar radiation was the only factor that had a significant effect on the decomposition of organic matter, with attenuation of ultraviolet-B and total radiation causing a 33 and 60 per cent reduction in decomposition, respectively. We conclude that photodegradation is a dominant control on above-ground litter decomposition in this semi-arid ecosystem. Losses through photochemical mineralization may represent a short-circuit in the carbon cycle, with a substantial fraction of carbon fixed in plant biomass being lost directly to the atmosphere without cycling through soil organic matter pools. Furthermore, future changes in radiation interception due to decreased cloudiness, increased stratospheric ozone depletion, or reduced vegetative cover may have a more significant effect on the carbon balance in these water-limited ecosystems than changes in temperature or precipitation.

Hyperspectral characteristics of canopy components and structure for phenological assessment of an invasive weed

Spectral reflectance values of four canopy components (stems, buds, opening flowers, and postflowers of yellow starthistle (Centaurea solstitialis)) were measured to describe their spectral characteristics. We then physically combined these canopy components to simulate the flowering stage indicated by accumulated flower ratios (AFR) 10%, 40%, 70%, and 90%, respectively. Spectral dissimilarity and spectral angles were calculated to quantitatively identify spectral differences among canopy components and characteristic patterns of these flowering stages. This study demonstrated the ability of hyperspectral data to characterize canopy components, and identify different flowering stages. Stems had a typical spectral profile of green vegetation, which produced a spectral dissimilarity with three reproduction organs (buds, opening flowers, and postflowers). Quantitative differences between simulated flower stages depended on spectral regions and phenological stages examined. Using full-range canopy spectra, the initial flowering stage could be separated from the early peak, peak, and late flowering stages by three spectral regions, i.e. the blue absorption (around 480 nm) and red absorption (around 650 nm) regions and NIR plateau from 730 nm to 950 nm. For airborne CASI data, only the red absorption region and NIR plateau could be used to identify the flowering stages in the field. This study also revealed that the peak flowering stage was more easily recognized than any of the other three stages.

Decoupling the direct and indirect effects of nitrogen deposition on ecosystem function

Elevated nitrogen (N) inputs into terrestrial ecosystems are causing major changes to the composition and functioning of ecosystems. Understanding these changes is challenging because there are complex interactions between 'direct' effects of N on plant physiology and soil biogeochemistry, and 'indirect' effects caused by changes in plant species composition. By planting high N and low N plant community compositions into high and low N deposition model terrestrial ecosystems we experimentally decoupled direct and indirect effects and quantified their contribution to changes in carbon, N and water cycling. Our results show that direct effects on plant growth dominate ecosystem response to N deposition, although long-term carbon storage is reduced under high N plant-species composition. These findings suggest that direct effects of N deposition on ecosystem function could be relatively strong in comparison with the indirect effects of plant community change.

Soil carbon and nitrogen storage in response to fire in a temperate mixed-grass savanna

Vegetation fires may alter the quantity and quality of organic matter inputs to soil, rates of organic matter decay, and environmental factors that influence those processes. However, few studies have evaluated the impacts of this land management technique on soil organic carbon (SOC) and total N in grasslands and savannas. We evaluated the impact of repeated fires and their season of occurrence on SOC and total N storage in a temperate mixed-grass-mesquite savanna where fire is used to control woody plant encroachment. Four fire treatments varying in season of occurrence were examined: summer only (SF), winter only (WF), alternate summer and winter fires (SWF), and unburned controls. In each treatment, soils were sampled to 1 m under three vegetation types: C3 grasses, C4 grasses, and mesquite trees. The SOC storage at 0 to 20 cm was significantly greater in SF (2693 g C m(-2)) and SWF (2708 g C m(-2)) compared to WF (2446 g C m(-2)) and controls (2445 g C m(-2)). The SWF treatment also increased soil total N (271 g N m(-2)) relative to all other treatments (228-244 g N m(-2)) at 0 to 20 cm. Fire had no effect on SOC or total N at depths of > 20 cm. Vegetation type had no significant influence on SOC or total N stocks. The delta13C value of SOC was not affected by fire, but increased from -21 per thousand at 0 to 10 cm to -15 per thousand at depths of > 20 cm indicating that all treatments were once dominated by C4 grasses before woody plant encroachment during the past century. These results have implications for scientists, land managers, and policymakers who are now evaluating the potential for land uses to alter ecosystem C storage and influence atmospheric CO2 concentrations and global climate.

North American prairie wetlands are important non-forested land-based carbon storage sites

We evaluated the potential of prairie wetlands in North America as carbon sinks. Agricultural conversion has resulted in the average loss of 10.1 Mg ha(-1) of soil organic carbon on over 16 million ha of wetlands in this region. Wetland restoration has potential to sequester 378 Tg of organic carbon over a 10-year period. Wetlands can sequester over twice the organic carbon as no-till cropland on only about 17% of the total land area in the region. We estimate that wetland restoration has potential to offset 2.4% of the annual fossil CO(2) emission reported for North America in 1990.

Urbanization increases grassland carbon pools: effects of landscaping in Colorado's front range

During the past few decades, urban and suburban developments have grown at unprecedented rates and extents with unknown consequences for ecosystem function. Carbon pools of soil and vegetation on landscaped properties were examined in the Front Range of Colorado, USA, in order to characterize vegetation and soils found in urban green spaces; analyze their aboveground biomass, vegetative C storage, and soil C storage; and compare these suburban ecosystem properties to their counterparts in native grassland and cultivated fields. Anthropogenic activities leave clear signatures on all three C compartments measured. Management level dominates the response of grass production, biomass, and N tissue concentration. This, in turn, influences the amount of C and N both stored in and harvested from sites. The site age dominates the amount of woody biomass as well as soil C and N. Soil texture only secondarily affects total soil carbon and total bulk density. Established urban green spaces harbor larger C pools, more than double in some cases, than native grasslands or agricultural fields on a per-area basis. Lawn grass produces more biomass and stores more C than local prairie or agricultural fields. Introduced woody vegetation comprises a substantial C pool in urban green spaces and represents a new ecosystem feature. After an initial decrease with site development, soil organic carbon (SOC) pools surpass those in grasslands within two decades. In addition to the marked increase of C pools through time, a shift in storage from belowground to aboveground occurs. Whereas grasslands store approximately 90% of C belowground, urban green spaces store a decreasing proportion of the total C belowground in soils through time, reaching approximately 70% 30-40 years after construction. Despite the substantial increase in C pools in this urban area, it is important to recognize that this shift is distinct from C sequestration since it does not account for a total C budget, including increased anthropogenic C emissions from these sites.

How elevated pCO2 modifies total and metabolically active bacterial communities in the rhizosphere of two perennial grasses grown under field conditions

The response of total (DNA-based analysis) and active (RNA-based analysis) bacterial communities to a pCO2 increase under field conditions was assessed using two perennial grasses: the nitrophilic Lolium perenne and the oligonitrophilic Molinia coerulea. PCR- and reverse transcriptase-PCR denaturing gradient gel electrophoresis analysis of 16S rRNA genes generated contrasting profiles. The pCO2 increase influenced mainly the active and root-associated component of the bacterial community. Bacterial groups responsive to the pCO2 increase were identified by sequencing of corresponding denaturing gradient gel electrophoresis bands. About 50% of retrieved sequences were affiliated to Proteobacteria. Our data suggest that Actinobacteria in soil and Myxococcales (Deltaproteobacteria) in root are stimulated under elevated pCO2.

Plant community responses to experimental warming across the tundra biome

Recent observations of changes in some tundra ecosystems appear to be responses to a warming climate. Several experimental studies have shown that tundra plants and ecosystems can respond strongly to environmental change, including warming; however, most studies were limited to a single location and were of short duration and based on a variety of experimental designs. In addition, comparisons among studies are difficult because a variety of techniques have been used to achieve experimental warming and different measurements have been used to assess responses. We used metaanalysis on plant community measurements from standardized warming experiments at 11 locations across the tundra biome involved in the International Tundra Experiment. The passive warming treatment increased plant-level air temperature by 1-3 degrees C, which is in the range of predicted and observed warming for tundra regions. Responses were rapid and detected in whole plant communities after only two growing seasons. Overall, warming increased height and cover of deciduous shrubs and graminoids, decreased cover of mosses and lichens, and decreased species diversity and evenness. These results predict that warming will cause a decline in biodiversity across a wide variety of tundra, at least in the short term. They also provide rigorous experimental evidence that recently observed increases in shrub cover in many tundra regions are in response to climate warming. These changes have important implications for processes and interactions within tundra ecosystems and between tundra and the atmosphere.

Trading water for carbon with biological carbon sequestration

Carbon sequestration strategies highlight tree plantations without considering their full environmental consequences. We combined field research, synthesis of more than 600 observations, and climate and economic modeling to document substantial losses in stream flow, and increased soil salinization and acidification, with afforestation. Plantations decreased stream flow by 227 millimeters per year globally (52%), with 13% of streams drying completely for at least 1 year. Regional modeling of U.S. plantation scenarios suggests that climate feedbacks are unlikely to offset such water losses and could exacerbate them. Plantations can help control groundwater recharge and upwelling but reduce stream flow and salinize and acidify some soils.

Soils as sources and sinks of greenhouse gases

Soils annually emit between 6.8 and 7.9 Gt CO2 equivalents, mainly as CH4 from intact peatlands and from rice agriculture; as N2O from unmanaged and managed soils; and as CO2 from land-use change. Methane emissions attributable to other wetlands add another 1.6–3.8 Gt CO2 equivalents. From a global standpoint, N2O from unmanaged soils and CH4 from peatlands and other wetlands make soils naturally net greenhouse gas emitters. In addition, the storage of carbon in soils and the fluxes of CH4 and N2O have been changed by anthropogenic effects towards emission rates 52 to 72% above those under natural conditions before the dawn of intensive agriculture and land-use change. Land-use changes on mineral soils induced most of the recorded losses of soil organic matter (SOM), but there is evidence that proper agricultural management of soil resources is able to recover some of these losses and to maintain soil functions. However, the discrepancy between so-called ‘sequestration potentials’ and the measures already adopted is amazingly large. Globally, only about 5% of the cropped areas is managed according to practices such as no tillage or organic farming. The contribution of soil loss by erosion, desertification and sealing to global oxidative SOM losses is uncertain; however, in the case of soil erosion, it is considered to be a major factor in global SOM decline. Mitigation options calculated for SOM restoration, reduced CH4 and N2O emissions are able to alleviate mean annual emissions by 1.2 to 2.9 Gt CO2 equivalents, mainly as a result of carbon sequestration, which is the most efficient measure for the next few decades. In the longer term, however, the large potential for reducing CH4 and N2O emissions outweigh the finite capacity of soils to recover C. Integrated assessment of net greenhouse-gas fluxes is key for evaluating management practices aimed at reducing overall emissions. From the viewpoint of climate change and taking into consideration the mean fluxes of CO2, CH4 and N2O, peatland protection is more favourable than peatland cultivation in the long term. The most important gaps in our understanding appear to be with regard to estimating fluxes along with soil erosion and desertification processes, in the extent of peatland cultivation; the role of black carbon formation, natural ‘background’ sequestration rates of undisturbed soils; and the net response of soils, particularly in cold regions, to global warming. With regard to the societal perception of soil contributing to the global cycling of greenhouse gases, it is important to emphasize that significant proportions of the emissions are inevitably linked to intensive agriculture.

Determinants of woody cover in African savannas

Savannas are globally important ecosystems of great significance to human economies. In these biomes, which are characterized by the co-dominance of trees and grasses, woody cover is a chief determinant of ecosystem properties. The availability of resources (water, nutrients) and disturbance regimes (fire, herbivory) are thought to be important in regulating woody cover, but perceptions differ on which of these are the primary drivers of savanna structure. Here we show, using data from 854 sites across Africa, that maximum woody cover in savannas receiving a mean annual precipitation (MAP) of less than approximately 650 mm is constrained by, and increases linearly with, MAP. These arid and semi-arid savannas may be considered 'stable' systems in which water constrains woody cover and permits grasses to coexist, while fire, herbivory and soil properties interact to reduce woody cover below the MAP-controlled upper bound. Above a MAP of approximately 650 mm, savannas are 'unstable' systems in which MAP is sufficient for woody canopy closure, and disturbances (fire, herbivory) are required for the coexistence of trees and grass. These results provide insights into the nature of African savannas and suggest that future changes in precipitation may considerably affect their distribution and dynamics.