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Lonardi G, Parolin R, Licini G, Orlandi M. Catalytic Asymmetric Conjugate Reduction. Angew Chem Int Ed Engl 2023; 62:e202216649. [PMID: 36757599 DOI: 10.1002/anie.202216649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 01/16/2023] [Accepted: 02/09/2023] [Indexed: 02/10/2023]
Abstract
Enantioselective reduction reactions are privileged transformations for the construction of trisubstituted stereogenic centers. While these include established synthetic strategies, such as asymmetric hydrogenation, methods based on the enantioselective addition of hydridic reagents to electrophilic prochiral substrates have also gained importance. In this context, the asymmetric conjugate reduction (ACR) of α,β-unsaturated compounds has become a convenient approach for the synthesis of chiral compounds with trisubstituted stereocenters in α-, β-, or γ-position to electron-withdrawing functional groups. Because such activating groups are diverse and amenable of further derivatizations, ACRs provide a general and powerful synthetic entry towards a variety of valuable chiral building blocks. This Review provides a comprehensive collection of catalytic ACR methods involving transition-metal, organic, and enzymatic catalysis since its first versions dating back to the late 1970s.
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Affiliation(s)
- Giovanni Lonardi
- Department of Chemical Sciences, University of Padova, Via Marzolo, 1, 35131, Padova, Italy
| | - Riccardo Parolin
- Department of Chemical Sciences, University of Padova, Via Marzolo, 1, 35131, Padova, Italy
| | - Giulia Licini
- Department of Chemical Sciences, University of Padova, Via Marzolo, 1, 35131, Padova, Italy
| | - Manuel Orlandi
- Department of Chemical Sciences, University of Padova, Via Marzolo, 1, 35131, Padova, Italy
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2
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Jurkaš V, Weissensteiner F, De Santis P, Vrabl S, Sorgenfrei FA, Bierbaumer S, Kara S, Kourist R, Wangikar PP, Winkler CK, Kroutil W. Transmembrane Shuttling of Photosynthetically Produced Electrons to Propel Extracellular Biocatalytic Redox Reactions in a Modular Fashion. ANGEWANDTE CHEMIE (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2022; 134:e202207971. [PMID: 38505002 PMCID: PMC10946770 DOI: 10.1002/ange.202207971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/03/2022] [Indexed: 03/21/2024]
Abstract
Many biocatalytic redox reactions depend on the cofactor NAD(P)H, which may be provided by dedicated recycling systems. Exploiting light and water for NADPH-regeneration as it is performed, e.g. by cyanobacteria, is conceptually very appealing due to its high atom economy. However, the current use of cyanobacteria is limited, e.g. by challenging and time-consuming heterologous enzyme expression in cyanobacteria as well as limitations of substrate or product transport through the cell wall. Here we establish a transmembrane electron shuttling system propelled by the cyanobacterial photosynthesis to drive extracellular NAD(P)H-dependent redox reactions. The modular photo-electron shuttling (MPS) overcomes the need for cloning and problems associated with enzyme- or substrate-toxicity and substrate uptake. The MPS was demonstrated on four classes of enzymes with 19 enzymes and various types of substrates, reaching conversions of up to 99 % and giving products with >99 % optical purity.
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Affiliation(s)
- Valentina Jurkaš
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
| | | | - Piera De Santis
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
- Department of Engineering, Biological and Chemical Engineering SectionBiocatalysis and Bioprocessing GroupAarhus UniversityGustav Wieds Vej 108000AarhusDenmark
| | - Stephan Vrabl
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
| | - Frieda A. Sorgenfrei
- Austrian Centre of Industrial Biotechnology, c/oInstitute of Chemistry, University of GrazHeinrichstraße 288010GrazAustria
| | - Sarah Bierbaumer
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
| | - Selin Kara
- Department of Engineering, Biological and Chemical Engineering SectionBiocatalysis and Bioprocessing GroupAarhus UniversityGustav Wieds Vej 108000AarhusDenmark
| | - Robert Kourist
- Institute of Molecular BiotechnologyGraz University of TechnologyPetersgasse 148010GrazAustria
| | - Pramod P. Wangikar
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076 IndiaDBT-Pan IIT Centre for Bioenergy, Indian Institute of Technology Bombay, Powai, Mumbai 400076 IndiaWadhwani Research Centre for BioengineeringIndian Institute of Technology BombayPowaiMumbai 400076India
| | | | - Wolfgang Kroutil
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
- Field of Excellence BioHealth—University of Graz8010GrazAustria
- BioTechMed Graz8010GrazAustria
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3
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Jurkaš V, Weissensteiner F, De Santis P, Vrabl S, Sorgenfrei FA, Bierbaumer S, Kara S, Kourist R, Wangikar PP, Winkler CK, Kroutil W. Transmembrane Shuttling of Photosynthetically Produced Electrons to Propel Extracellular Biocatalytic Redox Reactions in a Modular Fashion. Angew Chem Int Ed Engl 2022; 61:e202207971. [PMID: 35921249 PMCID: PMC9804152 DOI: 10.1002/anie.202207971] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2022] [Indexed: 01/05/2023]
Abstract
Many biocatalytic redox reactions depend on the cofactor NAD(P)H, which may be provided by dedicated recycling systems. Exploiting light and water for NADPH-regeneration as it is performed, e.g. by cyanobacteria, is conceptually very appealing due to its high atom economy. However, the current use of cyanobacteria is limited, e.g. by challenging and time-consuming heterologous enzyme expression in cyanobacteria as well as limitations of substrate or product transport through the cell wall. Here we establish a transmembrane electron shuttling system propelled by the cyanobacterial photosynthesis to drive extracellular NAD(P)H-dependent redox reactions. The modular photo-electron shuttling (MPS) overcomes the need for cloning and problems associated with enzyme- or substrate-toxicity and substrate uptake. The MPS was demonstrated on four classes of enzymes with 19 enzymes and various types of substrates, reaching conversions of up to 99 % and giving products with >99 % optical purity.
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Affiliation(s)
- Valentina Jurkaš
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
| | | | - Piera De Santis
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
- Department of Engineering, Biological and Chemical Engineering SectionBiocatalysis and Bioprocessing GroupAarhus UniversityGustav Wieds Vej 108000AarhusDenmark
| | - Stephan Vrabl
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
| | - Frieda A. Sorgenfrei
- Austrian Centre of Industrial Biotechnology, c/oInstitute of Chemistry, University of GrazHeinrichstraße 288010GrazAustria
| | - Sarah Bierbaumer
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
| | - Selin Kara
- Department of Engineering, Biological and Chemical Engineering SectionBiocatalysis and Bioprocessing GroupAarhus UniversityGustav Wieds Vej 108000AarhusDenmark
| | - Robert Kourist
- Institute of Molecular BiotechnologyGraz University of TechnologyPetersgasse 148010GrazAustria
| | - Pramod P. Wangikar
- Department of Chemical Engineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076 IndiaDBT-Pan IIT Centre for Bioenergy, Indian Institute of Technology Bombay, Powai, Mumbai 400076 IndiaWadhwani Research Centre for BioengineeringIndian Institute of Technology BombayPowaiMumbai 400076India
| | | | - Wolfgang Kroutil
- Institute of ChemistryUniversity of GrazHeinrichstraße 288010GrazAustria
- Field of Excellence BioHealth—University of Graz8010GrazAustria
- BioTechMed Graz8010GrazAustria
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4
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Zhou L, Ouyang Y, Kong W, Ma T, Zhao H, Jiang Y, Gao J, Ma L. One pot purification and co-immobilization of His-tagged old yellow enzyme and glucose dehydrogenase for asymmetric hydrogenation. Enzyme Microb Technol 2022; 156:110001. [DOI: 10.1016/j.enzmictec.2022.110001] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Revised: 01/20/2022] [Accepted: 01/30/2022] [Indexed: 11/27/2022]
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5
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Oroz‐Guinea I, Winkler CK, Glueck SM, Ditrich K, Weingarten M, Breuer M, Schachtschabel D, Kroutil W. Ene‐Reductase Catalyzed Regio‐ and Stereoselective 1,4‐Mono‐Reduction of Pseudoionone to Geranylacetone. ChemCatChem 2021. [DOI: 10.1002/cctc.202101557] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
Affiliation(s)
- Isabel Oroz‐Guinea
- Austrian Centre of Industrial Biotechnology c/o University of Graz Heinrichstrasse 28 8010 Graz Austria
- Institute of Chemistry University of Graz NAWI Graz Heinrichstrasse 28 8010 Graz Austria
| | - Christoph K. Winkler
- Institute of Chemistry University of Graz NAWI Graz Heinrichstrasse 28 8010 Graz Austria
| | - Silvia M. Glueck
- Austrian Centre of Industrial Biotechnology c/o University of Graz Heinrichstrasse 28 8010 Graz Austria
| | - Klaus Ditrich
- BASF SE Industrial Biotechnology Carl-Bosch-Strasse 38 67056 Ludwigshafen Germany
| | - Melanie Weingarten
- BASF SE Industrial Biotechnology Carl-Bosch-Strasse 38 67056 Ludwigshafen Germany
| | - Michael Breuer
- BASF SE Industrial Biotechnology Carl-Bosch-Strasse 38 67056 Ludwigshafen Germany
| | | | - Wolfgang Kroutil
- Austrian Centre of Industrial Biotechnology c/o University of Graz Heinrichstrasse 28 8010 Graz Austria
- Institute of Chemistry University of Graz NAWI Graz Heinrichstrasse 28 8010 Graz Austria
- BioTechMed Graz Heinrichstrasse 28 8010 Graz Austria
- Field of Excellence BioHealth University of Graz Heinrichstrasse 28 8010 Graz Austria
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Rauch MCR, Gallou Y, Delorme L, Paul CE, Arends IWCE, Hollmann F. Metals in Biotechnology: Cr-Driven Stereoselective Reduction of Conjugated C=C Double Bonds. Chembiochem 2020; 21:1112-1115. [PMID: 31713969 PMCID: PMC7217005 DOI: 10.1002/cbic.201900685] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/11/2019] [Indexed: 11/13/2022]
Abstract
Elemental metals are shown to be suitable sacrificial electron donors to drive the stereoselective reduction of conjugated C=C double bonds using Old Yellow Enzymes as catalysts. Both direct electron transfer from the metal to the enzyme as well as mediated electron transfer is feasible, although the latter excels by higher reaction rates. The general applicability of this new chemoenzymatic reduction method is demonstrated, and current limitations are outlined.
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Affiliation(s)
- Marine C. R. Rauch
- Department of BiotechnologyDelft University of TechnologyVan der Maasweg 92629HZDelftThe Netherlands
| | - Yann Gallou
- Department of BiotechnologyDelft University of TechnologyVan der Maasweg 92629HZDelftThe Netherlands
| | - Léna Delorme
- Department of BiotechnologyDelft University of TechnologyVan der Maasweg 92629HZDelftThe Netherlands
| | - Caroline E. Paul
- Department of BiotechnologyDelft University of TechnologyVan der Maasweg 92629HZDelftThe Netherlands
| | | | - Frank Hollmann
- Department of BiotechnologyDelft University of TechnologyVan der Maasweg 92629HZDelftThe Netherlands
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7
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Heckenbichler K, Schweiger A, Brandner LA, Binter A, Toplak M, Macheroux P, Gruber K, Breinbauer R. Asymmetric Reductive Carbocyclization Using Engineered Ene Reductases. Angew Chem Int Ed Engl 2018; 57:7240-7244. [PMID: 29689601 PMCID: PMC6033016 DOI: 10.1002/anie.201802962] [Citation(s) in RCA: 34] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/13/2018] [Indexed: 01/14/2023]
Abstract
Ene reductases from the Old Yellow Enzyme (OYE) family reduce the C=C double bond in α,β-unsaturated compounds bearing an electron-withdrawing group, for example, a carbonyl group. This asymmetric reduction has been exploited for biocatalysis. Going beyond its canonical function, we show that members of this enzyme family can also catalyze the formation of C-C bonds. α,β-Unsaturated aldehydes and ketones containing an additional electrophilic group undergo reductive cyclization. Mechanistically, the two-electron-reduced enzyme cofactor FMN delivers a hydride to generate an enolate intermediate, which reacts with the internal electrophile. Single-site replacement of a crucial Tyr residue with a non-protic Phe or Trp favored the cyclization over the natural reduction reaction. The new transformation enabled the enantioselective synthesis of chiral cyclopropanes in up to >99 % ee.
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Affiliation(s)
- Kathrin Heckenbichler
- Institute of Organic ChemistryGraz University of TechnologyStremayrgasse 98010GrazAustria
| | - Anna Schweiger
- Institute of Organic ChemistryGraz University of TechnologyStremayrgasse 98010GrazAustria
| | - Lea Alexandra Brandner
- Institute of Organic ChemistryGraz University of TechnologyStremayrgasse 98010GrazAustria
| | - Alexandra Binter
- Institute of BiochemistryGraz University of TechnologyPetersgasse 10–128010GrazAustria
- Austrian Centre of Industrial Biotechnology (ACIB)Petersgasse 148010GrazAustria
| | - Marina Toplak
- Institute of BiochemistryGraz University of TechnologyPetersgasse 10–128010GrazAustria
| | - Peter Macheroux
- Institute of BiochemistryGraz University of TechnologyPetersgasse 10–128010GrazAustria
| | - Karl Gruber
- Austrian Centre of Industrial Biotechnology (ACIB)Petersgasse 148010GrazAustria
- Institute of Molecular BiosciencesUniversity of GrazHumboldtstraße 508010GrazAustria
| | - Rolf Breinbauer
- Institute of Organic ChemistryGraz University of TechnologyStremayrgasse 98010GrazAustria
- Austrian Centre of Industrial Biotechnology (ACIB)Petersgasse 148010GrazAustria
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8
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Heckenbichler K, Schweiger A, Brandner LA, Binter A, Toplak M, Macheroux P, Gruber K, Breinbauer R. Asymmetrische reduktive Carbocyclisierung durch modifizierte En-Reduktasen. Angew Chem Int Ed Engl 2018. [DOI: 10.1002/ange.201802962] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Kathrin Heckenbichler
- Institut für Organische Chemie; Technische Universität Graz; Stremayrgasse 9 8010 Graz Österreich
| | - Anna Schweiger
- Institut für Organische Chemie; Technische Universität Graz; Stremayrgasse 9 8010 Graz Österreich
| | - Lea Alexandra Brandner
- Institut für Organische Chemie; Technische Universität Graz; Stremayrgasse 9 8010 Graz Österreich
| | - Alexandra Binter
- Institut für Biochemie; Technische Universität Graz; Petersgasse 10-12 8010 Graz Österreich
- Austrian Centre of Industrial Biotechnology (ACIB); Petersgasse 14 8010 Graz Österreich
| | - Marina Toplak
- Institut für Biochemie; Technische Universität Graz; Petersgasse 10-12 8010 Graz Österreich
| | - Peter Macheroux
- Institut für Biochemie; Technische Universität Graz; Petersgasse 10-12 8010 Graz Österreich
| | - Karl Gruber
- Austrian Centre of Industrial Biotechnology (ACIB); Petersgasse 14 8010 Graz Österreich
- Institut für Molekulare Biowissenschaften; Karl-Franzens-Universität Graz; Humboldtstraße 50 8010 Graz Österreich
| | - Rolf Breinbauer
- Institut für Organische Chemie; Technische Universität Graz; Stremayrgasse 9 8010 Graz Österreich
- Austrian Centre of Industrial Biotechnology (ACIB); Petersgasse 14 8010 Graz Österreich
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9
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Zhang X, Liao S, Cao F, Zhao L, Pei J, Tang F. Cloning and characterization of enoate reductase with high β-ionone to dihydro-β-ionone bioconversion productivity. BMC Biotechnol 2018; 18:26. [PMID: 29743047 PMCID: PMC5944158 DOI: 10.1186/s12896-018-0438-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2017] [Accepted: 04/23/2018] [Indexed: 11/28/2022] Open
Abstract
Background Dihydro-β-ionone is a principal aroma compound and has received considerable attention by flavor and fragrance industry. The traditional method of preparing dihydro-β-ionone has many drawbacks, which has restricted its industrial application. Therefore, it is necessary to find a biotechnological method to produce dihydro-β-ionone. Results In this study, the enoate reductase with high conversion efficiency of β-ionone to dihydro-β-ionone, DBR1, was obtained by screening four genetically engineered bacteria. The product, dihydro-β-ionone, was analyzed by GC and GC-MS. The highest dihydro-β-ionone production with 308.3 mg/L was detected in the recombinant strain expressing DBR1 which was later on expressed and purified. Its optimal temperature and pH were 45 °C and 6.5, respectively. The greatest activity of the purified enzyme was 356.39 U/mg using β-ionone as substrate. In the enzymatic conversion system, 1 mM of β-ionone was transformed into 91.08 mg/L of dihydro-β-ionone with 93.80% of molar conversion. Conclusion DBR1 had high selectivity to hydrogenated the 10,11-unsaturated double bond of β-ionone as well as high catalytic efficiency for the conversion of β-ionone to dihydro-β-ionone. It is the first report on the bioconversion of β-ionone to dihydro-β-ionone by using enoate reductase. Electronic supplementary material The online version of this article (10.1186/s12896-018-0438-x) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Xuesong Zhang
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Long Pan Road, Nanjing, 210037, China.,College of Tea and Food Science and Technology, Jiangsu Polytechnic College of Agriculture and Forestry, Jurong, 212400, China
| | - Shiyong Liao
- College of Chemical Engineering, Nanjing Forestry University, 159 Long Pan Road, Nanjing, 210037, China
| | - Fuliang Cao
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Long Pan Road, Nanjing, 210037, China
| | - Linguo Zhao
- Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Long Pan Road, Nanjing, 210037, China. .,College of Chemical Engineering, Nanjing Forestry University, 159 Long Pan Road, Nanjing, 210037, China.
| | - Jianjun Pei
- College of Chemical Engineering, Nanjing Forestry University, 159 Long Pan Road, Nanjing, 210037, China.,Jiangsu Key Lab for the Chemistry & Utilization of Agricultural and Forest Biomass, 159 Long Pan Road, Nanjing, 210037, China
| | - Feng Tang
- International centre for bamboo and rattan, 8 FuTong East Street, Beijing, 100714, China
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Yamamoto K, Oku Y, Ina A, Izumi A, Doya M, Ebata S, Asano Y. Purification and Characterization of an Enone Reductase from Sporidiobolus salmonicolor
TPU 2001 Reacting with Large Monocyclic Enones. ChemCatChem 2017. [DOI: 10.1002/cctc.201700244] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Kazunori Yamamoto
- Biotechnology Research Center and Department of Biotechnology; Toyama Prefectural University; 5180 Kurokawa Imizu Toyama Japan
- Asano Active Enzyme Molecule Project; ERATO, JST; 5180 Kurokawa Imizu Toyama Japan
| | - Yuko Oku
- Biotechnology Research Center and Department of Biotechnology; Toyama Prefectural University; 5180 Kurokawa Imizu Toyama Japan
- Asano Active Enzyme Molecule Project; ERATO, JST; 5180 Kurokawa Imizu Toyama Japan
| | - Atsutoshi Ina
- Biotechnology Research Center and Department of Biotechnology; Toyama Prefectural University; 5180 Kurokawa Imizu Toyama Japan
- Asano Active Enzyme Molecule Project; ERATO, JST; 5180 Kurokawa Imizu Toyama Japan
| | - Atsushi Izumi
- Biotechnology Research Center and Department of Biotechnology; Toyama Prefectural University; 5180 Kurokawa Imizu Toyama Japan
- Asano Active Enzyme Molecule Project; ERATO, JST; 5180 Kurokawa Imizu Toyama Japan
| | - Masaharu Doya
- Toho Earthtec, Inc.; 1450 Kurotori, Nishi-ku Niigata Niigata Japan
| | - Syuji Ebata
- Toho Earthtec, Inc.; 1450 Kurotori, Nishi-ku Niigata Niigata Japan
| | - Yasuhisa Asano
- Biotechnology Research Center and Department of Biotechnology; Toyama Prefectural University; 5180 Kurokawa Imizu Toyama Japan
- Asano Active Enzyme Molecule Project; ERATO, JST; 5180 Kurokawa Imizu Toyama Japan
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Lee SH, Choi DS, Pesic M, Lee YW, Paul CE, Hollmann F, Park CB. Cofactor-Free, Direct Photoactivation of Enoate Reductases for the Asymmetric Reduction of C=C Bonds. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201702461] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Sahng Ha Lee
- Department of Materials Science and Engineering; Korea Advanced Institute of Science and Technology; 335 Science Road Daejeon 305-701 Republic of Korea
| | - Da Som Choi
- Department of Materials Science and Engineering; Korea Advanced Institute of Science and Technology; 335 Science Road Daejeon 305-701 Republic of Korea
| | - Milja Pesic
- Department of Biotechnology; Delft University of Technology; Van der Maasweg 9 2629 HZ Delft The Netherlands
| | - Yang Woo Lee
- Department of Materials Science and Engineering; Korea Advanced Institute of Science and Technology; 335 Science Road Daejeon 305-701 Republic of Korea
| | - Caroline E. Paul
- Department of Biotechnology; Delft University of Technology; Van der Maasweg 9 2629 HZ Delft The Netherlands
| | - Frank Hollmann
- Department of Biotechnology; Delft University of Technology; Van der Maasweg 9 2629 HZ Delft The Netherlands
| | - Chan Beum Park
- Department of Materials Science and Engineering; Korea Advanced Institute of Science and Technology; 335 Science Road Daejeon 305-701 Republic of Korea
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12
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Lee SH, Choi DS, Pesic M, Lee YW, Paul CE, Hollmann F, Park CB. Cofactor-Free, Direct Photoactivation of Enoate Reductases for the Asymmetric Reduction of C=C Bonds. Angew Chem Int Ed Engl 2017; 56:8681-8685. [PMID: 28544039 PMCID: PMC5519925 DOI: 10.1002/anie.201702461] [Citation(s) in RCA: 60] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2017] [Revised: 04/08/2017] [Indexed: 11/10/2022]
Abstract
Enoate reductases from the family of old yellow enzymes (OYEs) can catalyze stereoselective trans-hydrogenation of activated C=C bonds. Their application is limited by the necessity for a continuous supply of redox equivalents such as nicotinamide cofactors [NAD(P)H]. Visible light-driven activation of OYEs through NAD(P)H-free, direct transfer of photoexcited electrons from xanthene dyes to the prosthetic flavin moiety is reported. Spectroscopic and electrochemical analyses verified spontaneous association of rose bengal and its derivatives with OYEs. Illumination of a white light-emitting-diode triggered photoreduction of OYEs by xanthene dyes, which facilitated the enantioselective reduction of C=C bonds in the absence of NADH. The photoenzymatic conversion of 2-methylcyclohexenone resulted in enantiopure (ee>99 %) (R)-2-methylcyclohexanone with conversion yields as high as 80-90 %. The turnover frequency was significantly affected by the substitution of halogen atoms in xanthene dyes.
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Affiliation(s)
- Sahng Ha Lee
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology, 335 Science Road, Daejeon, 305-701, Republic of Korea
| | - Da Som Choi
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology, 335 Science Road, Daejeon, 305-701, Republic of Korea
| | - Milja Pesic
- Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 HZ, Delft, The Netherlands
| | - Yang Woo Lee
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology, 335 Science Road, Daejeon, 305-701, Republic of Korea
| | - Caroline E Paul
- Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 HZ, Delft, The Netherlands
| | - Frank Hollmann
- Department of Biotechnology, Delft University of Technology, Van der Maasweg 9, 2629 HZ, Delft, The Netherlands
| | - Chan Beum Park
- Department of Materials Science and Engineering, Korea Advanced Institute of Science and Technology, 335 Science Road, Daejeon, 305-701, Republic of Korea
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13
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Brenna E, Crotti M, Gatti FG, Monti D, Parmeggiani F, Santangelo S. Asymmetric Bioreduction of β-Acylaminonitroalkenes: Easy Access to Chiral Building Blocks with Two Vicinal Nitrogen-Containing Functional Groups. ChemCatChem 2017. [DOI: 10.1002/cctc.201700063] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Elisabetta Brenna
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta”; Politecnico di Milano; Via Mancinelli 7, I- 20131 Milano Italy
- Istituto di Chimica del Riconoscimento Molecolare; C.N.R.; Via Mario Bianco 9, I- 20131 Milano Italy
| | - Michele Crotti
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta”; Politecnico di Milano; Via Mancinelli 7, I- 20131 Milano Italy
| | - Francesco G. Gatti
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta”; Politecnico di Milano; Via Mancinelli 7, I- 20131 Milano Italy
| | - Daniela Monti
- Istituto di Chimica del Riconoscimento Molecolare; C.N.R.; Via Mario Bianco 9, I- 20131 Milano Italy
| | - Fabio Parmeggiani
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta”; Politecnico di Milano; Via Mancinelli 7, I- 20131 Milano Italy
| | - Sara Santangelo
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta”; Politecnico di Milano; Via Mancinelli 7, I- 20131 Milano Italy
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Iijima M, Kenmoku H, Takahashi H, Lee JB, Toyota M, Asakawa Y, Kurosaki F, Taura F. Characterization of 12-Oxophytodienoic Acid Reductases from Rose-scented Geranium (Pelargonium graveolens). Nat Prod Commun 2016. [DOI: 10.1177/1934578x1601101201] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
Abstract
Pelargonium graveolens L'Hér, also referred to as rose geranium, is a popular herbal plant with typical rosy fragrance largely based on the blend of monoterpenoid constituents. Among them, citronellol, which is biosynthesized from geraniol via double bond reduction, is the most abundant scent compound. In this study, three 12-oxophytodienoic acid reductases (PgOPR1–3) have been cloned from P. graveolens, as possible candidates for the double-bond reductase involved in citronellol biosynthesis. The bacterially expressed recombinant PgOPRs did not reduce geraniol to citronellol, but stereoselectively converted citral into ( S)-citronellal in the presence of NADPH. Thus, the α,β-unsaturated carbonyl moiety in the substrate is essential for the catalytic activity of PgOPRs, as reported for OPRs from other plants and structurally related yeast old yellow enzymes. PgOPRs promiscuously accepted linear and cyclic α,β-unsaturated carbonyl substrates, including methacrolein, a typical reactive carbonyl compound. The possible biotechnological applications for PgOPRs in plant metabolic engineering, based on their catalytic properties, are discussed herein.
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Affiliation(s)
- Miu Iijima
- Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Sugitani, Toyama 930-0194, Japan
| | - Hiromichi Kenmoku
- Institute of Pharmacognosy, Tokushima Bunri University, Yamashiro-cho, Tokushima 770-8514, Japan
| | - Hironobu Takahashi
- Institute of Pharmacognosy, Tokushima Bunri University, Yamashiro-cho, Tokushima 770-8514, Japan
| | - Jung-Bum Lee
- Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Sugitani, Toyama 930-0194, Japan
| | - Masao Toyota
- Institute of Pharmacognosy, Tokushima Bunri University, Yamashiro-cho, Tokushima 770-8514, Japan
| | - Yoshinori Asakawa
- Institute of Pharmacognosy, Tokushima Bunri University, Yamashiro-cho, Tokushima 770-8514, Japan
| | - Fumiya Kurosaki
- Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Sugitani, Toyama 930-0194, Japan
| | - Futoshi Taura
- Graduate School of Medicine and Pharmaceutical Sciences for Research, University of Toyama, Sugitani, Toyama 930-0194, Japan
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15
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A thermophilic-like ene-reductase originating from an acidophilic iron oxidizer. Appl Microbiol Biotechnol 2016; 101:609-619. [DOI: 10.1007/s00253-016-7782-3] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2016] [Revised: 07/21/2016] [Accepted: 08/03/2016] [Indexed: 01/25/2023]
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16
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Köninger K, Gómez Baraibar Á, Mügge C, Paul CE, Hollmann F, Nowaczyk MM, Kourist R. Rekombinante Cyanobakterien für die asymmetrische Reduktion von C=C‐Bindungen mithilfe biokatalytischer Wasseroxidation. Angew Chem Int Ed Engl 2016. [DOI: 10.1002/ange.201601200] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Affiliation(s)
- Katharina Köninger
- Nachwuchsgruppe Mikrobielle Biotechnologie Ruhr-Universität Bochum 44780 Bochum Deutschland
| | - Álvaro Gómez Baraibar
- Nachwuchsgruppe Mikrobielle Biotechnologie Ruhr-Universität Bochum 44780 Bochum Deutschland
| | - Carolin Mügge
- Nachwuchsgruppe Mikrobielle Biotechnologie Ruhr-Universität Bochum 44780 Bochum Deutschland
| | - Caroline E. Paul
- Department of Biotechnology Delft University of Technology Niederlande
| | - Frank Hollmann
- Department of Biotechnology Delft University of Technology Niederlande
| | - Marc M. Nowaczyk
- Lehrstuhl Biochemie der Pflanzen Ruhr-Universität Bochum Deutschland
| | - Robert Kourist
- Nachwuchsgruppe Mikrobielle Biotechnologie Ruhr-Universität Bochum 44780 Bochum Deutschland
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17
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Köninger K, Gómez Baraibar Á, Mügge C, Paul CE, Hollmann F, Nowaczyk MM, Kourist R. Recombinant Cyanobacteria for the Asymmetric Reduction of C=C Bonds Fueled by the Biocatalytic Oxidation of Water. Angew Chem Int Ed Engl 2016; 55:5582-5. [PMID: 27029020 DOI: 10.1002/anie.201601200] [Citation(s) in RCA: 81] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2016] [Indexed: 02/04/2023]
Abstract
A recombinant enoate reductase was expressed in cyanobacteria and used for the light-catalyzed, enantioselective reduction of C=C bonds. The coupling of oxidoreductases to natural photosynthesis allows asymmetric syntheses fueled by the oxidation of water. Bypassing the addition of sacrificial cosubstrates as electron donors significantly improves the atom efficiency and avoids the formation of undesired side products. Crucial factors for product formation are the availability of NADPH and the amount of active enzyme in the cells. The efficiency of the reaction is comparable to typical whole-cell biotransformations in E. coli. Under optimized conditions, a solution of 100 mg prochiral 2-methylmaleimide was reduced to optically pure 2-methylsuccinimide (99 % ee, 80 % yield of isolated product). High product yields and excellent optical purities demonstrate the synthetic usefulness of light-catalyzed whole-cell biotransformations using recombinant cyanobacteria.
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Affiliation(s)
- Katharina Köninger
- Junior Research Group for Microbial Biotechnology, Ruhr-Universität Bochum, 44780, Bochum, Germany
| | - Álvaro Gómez Baraibar
- Junior Research Group for Microbial Biotechnology, Ruhr-Universität Bochum, 44780, Bochum, Germany
| | - Carolin Mügge
- Junior Research Group for Microbial Biotechnology, Ruhr-Universität Bochum, 44780, Bochum, Germany
| | - Caroline E Paul
- Department of Biotechnology, Delft University of Technology, The Netherlands
| | - Frank Hollmann
- Department of Biotechnology, Delft University of Technology, The Netherlands
| | - Marc M Nowaczyk
- Chair of Plant Biochemistry, Ruhr-Universität Bochum, Germany
| | - Robert Kourist
- Junior Research Group for Microbial Biotechnology, Ruhr-Universität Bochum, 44780, Bochum, Germany.
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18
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Reich S, Nestl BM, Hauer B. Loop-Grafted Old Yellow Enzymes in the Bienzymatic Cascade Reduction of Allylic Alcohols. Chembiochem 2016; 17:561-5. [DOI: 10.1002/cbic.201500604] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2015] [Indexed: 11/05/2022]
Affiliation(s)
- Sabrina Reich
- Institute of Technical Biochemistry; Universität Stuttgart; Allmandring 31 70569 Stuttgart Germany
| | - Bettina M. Nestl
- Institute of Technical Biochemistry; Universität Stuttgart; Allmandring 31 70569 Stuttgart Germany
| | - Bernhard Hauer
- Institute of Technical Biochemistry; Universität Stuttgart; Allmandring 31 70569 Stuttgart Germany
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19
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Löw SA, Löw IM, Weissenborn MJ, Hauer B. Enhanced Ene-Reductase Activity through Alteration of Artificial Nicotinamide Cofactor Substituents. ChemCatChem 2016. [DOI: 10.1002/cctc.201501230] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Sebastian A. Löw
- Institute of Technical Biochemistry; University of Stuttgart; Allmandring 31 70569 Stuttgart Germany
| | - Isabell M. Löw
- Institute of Inorganic Chemistry; University of Stuttgart; Pfaffenwaldring 55 70569 Stuttgart Germany
| | - Martin J. Weissenborn
- Institute of Technical Biochemistry; University of Stuttgart; Allmandring 31 70569 Stuttgart Germany
| | - Bernhard Hauer
- Institute of Technical Biochemistry; University of Stuttgart; Allmandring 31 70569 Stuttgart Germany
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20
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Bertolotti M, Brenna E, Crotti M, Gatti FG, Monti D, Parmeggiani F, Santangelo S. Substrate Scope Evaluation of the Enantioselective Reduction of β-Alkyl-β-arylnitroalkenes by Old Yellow Enzymes 1-3 for Organic Synthesis Applications. ChemCatChem 2015. [DOI: 10.1002/cctc.201500958] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Mattia Bertolotti
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta” Politecnico di Milano; Via Mancinelli 7 20131 Milano Italy
| | - Elisabetta Brenna
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta” Politecnico di Milano; Via Mancinelli 7 20131 Milano Italy
- Istituto di Chimica del Riconoscimento Molecolare; C.N.R.; Via Mario Bianco, 9 20131 Milano Italy
| | - Michele Crotti
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta” Politecnico di Milano; Via Mancinelli 7 20131 Milano Italy
| | - Francesco G. Gatti
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta” Politecnico di Milano; Via Mancinelli 7 20131 Milano Italy
| | - Daniela Monti
- Istituto di Chimica del Riconoscimento Molecolare; C.N.R.; Via Mario Bianco, 9 20131 Milano Italy
| | - Fabio Parmeggiani
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta” Politecnico di Milano; Via Mancinelli 7 20131 Milano Italy
| | - Sara Santangelo
- Dipartimento di Chimica; Materiali ed Ingegneria Chimica “Giulio Natta” Politecnico di Milano; Via Mancinelli 7 20131 Milano Italy
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21
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Forchin MC, Crotti M, Gatti FG, Parmeggiani F, Brenna E, Monti D. A Rapid and High-Throughput Assay for the Estimation of Conversions of Ene-Reductase-Catalysed Reactions. Chembiochem 2015; 16:1571-3. [PMID: 26033160 DOI: 10.1002/cbic.201500219] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2015] [Indexed: 11/10/2022]
Abstract
A fast and sensitive colorimetric assay (FRED, fast and reliable ene-reductases detection) that allows the estimation of levels of conversion of ene-reductase (ER)-catalysed reactions has been developed. The activated olefin is reduced by ER at the expense of NAD(P)H cofactor, whose regeneration is carried out in situ by the glucose/glucose dehydrogenase system. Subsequently, the consumption of the co-substrate glucose is determined colorimetrically by a multienzymatic system. The FRED assay offers a wide range of possible applications, from enzyme fingerprinting and kinetic analysis, to primary screening of enzyme libraries and optimisation of ERs' performances under different reaction conditions.
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Affiliation(s)
- Maria Chiara Forchin
- Istituto di Chimica del Riconoscimento Molecolare, CNR, Via Mario Bianco 9, 20131 Milano (Italy)
| | - Michele Crotti
- Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Mancinelli 7, 20131 Milano (Italy)
| | - Francesco G Gatti
- Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Mancinelli 7, 20131 Milano (Italy)
| | - Fabio Parmeggiani
- Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Mancinelli 7, 20131 Milano (Italy).
| | - Elisabetta Brenna
- Department of Chemistry, Materials and Chemical Engineering "Giulio Natta", Politecnico di Milano, Via Mancinelli 7, 20131 Milano (Italy)
| | - Daniela Monti
- Istituto di Chimica del Riconoscimento Molecolare, CNR, Via Mario Bianco 9, 20131 Milano (Italy).
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22
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Brenna E, Crotti M, Gatti FG, Monti D, Parmeggiani F, Powell RW, Santangelo S, Stewart JD. Opposite Enantioselectivity in the Bioreduction of (Z
)-β-Aryl-β-cyanoacrylates Mediated by the Tryptophan 116 Mutants of Old Yellow Enzyme 1: Synthetic Approach to (R
)- and (S
)-β-Aryl-γ-lactams. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500206] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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23
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Rüthlein E, Classen T, Dobnikar L, Schölzel M, Pietruszka J. Finding the Selectivity Switch - A Rational Approach towards Stereocomplementary Variants of the Ene Reductase YqjM. Adv Synth Catal 2015. [DOI: 10.1002/adsc.201500149] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
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24
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Reß T, Hummel W, Hanlon SP, Iding H, Gröger H. The Organic-Synthetic Potential of Recombinant Ene Reductases: Substrate-Scope Evaluation and Process Optimization. ChemCatChem 2015. [DOI: 10.1002/cctc.201402903] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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25
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Winkler CK, Clay D, Turrini NG, Lechner H, Kroutil W, Davies S, Debarge S, O'Neill P, Steflik J, Karmilowicz M, Wong JW, Faber K. Nitrile as Activating Group in the Asymmetric Bioreduction of β-Cyanoacrylic Acids Catalyzed by Ene-Reductases. Adv Synth Catal 2014; 356:1878-1882. [PMID: 26190962 PMCID: PMC4498475 DOI: 10.1002/adsc.201301055] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2013] [Revised: 02/13/2014] [Indexed: 11/13/2022]
Abstract
Asymmetric bioreduction of an (E)-β-cyano-2,4-dienoic acid derivative by ene-reductases allowed a shortened access to a precursor of pregabalin [(S)-3-(aminomethyl)-5-methylhexanoic acid] possessing the desired configuration in up to 94% conversion and >99% ee. Deuterium labelling studies showed that the nitrile moiety was the preferred activating/anchor group in the active site of the enzyme over the carboxylic acid or the corresponding methyl ester.
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Affiliation(s)
- Christoph K Winkler
- Department of Chemistry, Organic & Bioorganic Chemistry, University of Graz Heinrichstrasse 28, A-8010 Graz, Austria, ; phone: (+43)-316-380-5332 ; e-mail:
| | - Dorina Clay
- Department of Chemistry, Organic & Bioorganic Chemistry, University of Graz Heinrichstrasse 28, A-8010 Graz, Austria, ; phone: (+43)-316-380-5332 ; e-mail:
| | - Nikolaus G Turrini
- Department of Chemistry, Organic & Bioorganic Chemistry, University of Graz Heinrichstrasse 28, A-8010 Graz, Austria, ; phone: (+43)-316-380-5332 ; e-mail:
| | - Horst Lechner
- Department of Chemistry, Organic & Bioorganic Chemistry, University of Graz Heinrichstrasse 28, A-8010 Graz, Austria, ; phone: (+43)-316-380-5332 ; e-mail:
| | - Wolfgang Kroutil
- Department of Chemistry, Organic & Bioorganic Chemistry, University of Graz Heinrichstrasse 28, A-8010 Graz, Austria, ; phone: (+43)-316-380-5332 ; e-mail:
| | - Simon Davies
- Pfizer Global Supply, Process Development Centre Loughbeg, County Cork, Ireland
| | - Sebastien Debarge
- Pfizer Global Supply, Process Development Centre Loughbeg, County Cork, Ireland
| | - Pat O'Neill
- Pfizer Global Supply, Process Development Centre Loughbeg, County Cork, Ireland
| | - Jeremy Steflik
- Pfizer Worldwide R&D, Chemical R&D Eastern Point Rd, Groton, CT 06340, USA
| | - Mike Karmilowicz
- Pfizer Worldwide R&D, Chemical R&D Eastern Point Rd, Groton, CT 06340, USA
| | - John W Wong
- Pfizer Worldwide R&D, Chemical R&D Eastern Point Rd, Groton, CT 06340, USA
| | - Kurt Faber
- Department of Chemistry, Organic & Bioorganic Chemistry, University of Graz Heinrichstrasse 28, A-8010 Graz, Austria, ; phone: (+43)-316-380-5332 ; e-mail:
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26
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27
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Winkler CK, Clay D, Entner M, Plank M, Faber K. NAD(P)H-independent asymmetric C=C bond reduction catalyzed by ene reductases by using artificial co-substrates as the hydrogen donor. Chemistry 2014; 20:1403-9. [PMID: 24382795 PMCID: PMC4413776 DOI: 10.1002/chem.201303897] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2013] [Indexed: 11/12/2022]
Abstract
To develop a nicotinamide-independent single flavoenzyme system for the asymmetric bioreduction of C=C bonds, four types of hydrogen donor, encompassing more than 50 candidates, were investigated. Six highly potent, cheap, and commercially available co-substrates were identified that (under the optimized conditions) resulted in conversions and enantioselectivities comparable with, or even superior to, those obtained with traditional two-enzyme nicotinamide adenine dinucleotide phosphate (NAD(P)H)-recycling systems.
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Affiliation(s)
- Christoph K Winkler
- Department of Chemistry, Organic and Bioorganic Chemistry, University of GrazHeinrichstrasse 28, 8010 Graz (Austria) Fax: (+43) 316-380-9840
| | - Dorina Clay
- Department of Chemistry, Organic and Bioorganic Chemistry, University of GrazHeinrichstrasse 28, 8010 Graz (Austria) Fax: (+43) 316-380-9840
| | - Marcello Entner
- Department of Chemistry, Organic and Bioorganic Chemistry, University of GrazHeinrichstrasse 28, 8010 Graz (Austria) Fax: (+43) 316-380-9840
| | - Markus Plank
- Department of Chemistry, Organic and Bioorganic Chemistry, University of GrazHeinrichstrasse 28, 8010 Graz (Austria) Fax: (+43) 316-380-9840
| | - Kurt Faber
- Department of Chemistry, Organic and Bioorganic Chemistry, University of GrazHeinrichstrasse 28, 8010 Graz (Austria) Fax: (+43) 316-380-9840
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28
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Toogood HS, Knaus T, Scrutton NS. Alternative Hydride Sources for Ene-Reductases: Current Trends. ChemCatChem 2013. [DOI: 10.1002/cctc.201300911] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Helen S. Toogood
- Manchester Institute of Biotechnology, Faculty of Life Sciences; University of Manchester; 131 Princess Street Manchester M1 7DN UK
| | - Tanja Knaus
- Manchester Institute of Biotechnology, Faculty of Life Sciences; University of Manchester; 131 Princess Street Manchester M1 7DN UK
| | - Nigel S. Scrutton
- Manchester Institute of Biotechnology, Faculty of Life Sciences; University of Manchester; 131 Princess Street Manchester M1 7DN UK
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29
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Li S, Huang K, Zhang J, Wu W, Zhang X. Rh-catalyzed highly enantioselective hydrogenation of nitroalkenes under basic conditions. Chemistry 2013; 19:10840-4. [PMID: 23818425 DOI: 10.1002/chem.201301049] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2013] [Indexed: 11/06/2022]
Affiliation(s)
- Shengkun Li
- College of Science, Northwest A&F University, Yangling, Shaanxi 712100, P. R. China
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30
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Rodríguez-Mata M, Frank A, Wells E, Leipold F, Turner NJ, Hart S, Turkenburg JP, Grogan G. Structure and activity of NADPH-dependent reductase Q1EQE0 from Streptomyces kanamyceticus, which catalyses the R-selective reduction of an imine substrate. Chembiochem 2013; 14:1372-9. [PMID: 23813853 DOI: 10.1002/cbic.201300321] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2013] [Indexed: 11/11/2022]
Abstract
NADPH-dependent oxidoreductase Q1EQE0 from Streptomyces kanamyceticus catalyzes the asymmetric reduction of the prochiral monocyclic imine 2-methyl-1-pyrroline to the chiral amine (R)-2-methylpyrrolidine with >99% ee, and is thus of interest as a potential biocatalyst for the production of optically active amines. The structures of Q1EQE0 in native form, and in complex with the nicotinamide cofactor NADPH have been solved and refined to a resolution of 2.7 Å. Q1EQE0 functions as a dimer in which the monomer consists of an N-terminal Rossman-fold motif attached to a helical C-terminal domain through a helix of 28 amino acids. The dimer is formed through reciprocal domain sharing in which the C-terminal domains are swapped, with a substrate-binding cleft formed between the N-terminal subunit of monomer A and the C-terminal subunit of monomer B. The structure is related to those of known β-hydroxyacid dehydrogenases, except that the essential lysine, which serves as an acid/base in the (de)protonation of the nascent alcohol in those enzymes, is replaced by an aspartate residue, Asp187 in Q1EQE0. Mutation of Asp187 to either asparagine or alanine resulted in an inactive enzyme.
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Affiliation(s)
- María Rodríguez-Mata
- York Structural Biology Laboratory, Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK
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31
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Cai XF, Chen MW, Ye ZS, Guo RN, Shi L, Li YQ, Zhou YG. Asymmetric Transfer Hydrogenation of 3-Nitroquinolines: Facile Access to Cyclic Nitro Compounds with Two Contiguous Stereocenters. Chem Asian J 2013; 8:1381-5. [DOI: 10.1002/asia.201300380] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2013] [Indexed: 11/11/2022]
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32
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Oberdorfer G, Binter A, Wallner S, Durchschein K, Hall M, Faber K, Macheroux P, Gruber K. The structure of glycerol trinitrate reductase NerA from Agrobacterium radiobacter reveals the molecular reason for nitro- and ene-reductase activity in OYE homologues. Chembiochem 2013; 14:836-45. [PMID: 23606302 PMCID: PMC3659409 DOI: 10.1002/cbic.201300136] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2013] [Indexed: 11/08/2022]
Abstract
In recent years, Old Yellow Enzymes (OYEs) and their homologues have found broad application in the efficient asymmetric hydrogenation of activated C=C bonds with high selectivities and yields. Members of this class of enzymes have been found in many different organisms and are rather diverse on the sequence level, with pairwise identities as low as 20 %, but they exhibit significant structural similarities with the adoption of a conserved (αβ)8-barrel fold. Some OYEs have been shown not only to reduce C=C double bonds, but also to be capable of reducing nitro groups in both saturated and unsaturated substrates. In order to understand this dual activity we determined and analyzed X-ray crystal structures of NerA from Agrobacterium radiobacter, both in its apo form and in complex with 4-hydroxybenzaldehyde and with 1-nitro-2-phenylpropene. These structures, together with spectroscopic studies of substrate binding to several OYEs, indicate that nitro-containing substrates can bind to OYEs in different binding modes, one of which leads to C=C double bond reduction and the other to nitro group reduction.
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Affiliation(s)
- Gustav Oberdorfer
- ACIB--Austrian Centre of Industrial Biotechnology, Petergasse 14, 8010 Graz, Austria
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33
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Classen T, Pietruszka J, Schuback SM. Revisiting the Enantioselective Sequence Patterns in Enoate Reductases. ChemCatChem 2012. [DOI: 10.1002/cctc.201200668] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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34
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Reich S, Hoeffken HW, Rosche B, Nestl BM, Hauer B. Crystal structure determination and mutagenesis analysis of the ene reductase NCR. Chembiochem 2012; 13:2400-7. [PMID: 23033175 DOI: 10.1002/cbic.201200404] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2012] [Indexed: 11/09/2022]
Abstract
The crystal structure of the "ene" nicotinamide-dependent cyclohexenone reductase (NCR) from Zymomonas mobilis (PDB ID: 4A3U) has been determined in complex with acetate ion, FMN, and nicotinamide, to a resolution of 1.95 Å. To study the activity and enantioselectivity of this enzyme in the bioreduction of activated α,β-unsaturated alkenes, the rational design methods site- and loop-directed mutagenesis were applied. Based on a multiple sequence alignment of various members of the Old Yellow Enzyme family, eight single-residue variants were generated and investigated in asymmetric bioreduction. Furthermore, a structural alignment of various ene reductases predicted four surface loop regions that are located near the entrance of the active site. Four NCR loop variants, derived from loop-swapping experiments with OYE1 from Saccharomyces pastorianus, were analysed for bioreduction. The three enzyme variants, P245Q, D337Y and F314Y, displayed increased activity compared to wild-type NCR towards the set of substrates tested. The active-site mutation Y177A demonstrated a clear influence on the enantioselectivity. The loop-swapping variants retained reduction efficiency, but demonstrated decreased enzyme activity compared with the wild-type NCR ene reductase enzyme.
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Affiliation(s)
- Sabrina Reich
- Universitaet Stuttgart, Institute of Technical Biochemistry, Allmandring 31, 70569 Stuttgart, Germany
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Li S, Huang K, Cao B, Zhang J, Wu W, Zhang X. Highly enantioselective hydrogenation of β,β-disubstituted nitroalkenes. Angew Chem Int Ed Engl 2012; 51:8573-6. [PMID: 22807193 DOI: 10.1002/anie.201202715] [Citation(s) in RCA: 45] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2012] [Revised: 05/27/2012] [Indexed: 11/11/2022]
Abstract
Building the building blocks: A highly enantioselective hydrogenation of β-aryl-β-alkyl disubstituted nitroalkenes 1 has been developed. This method results in enantiomerically pure nitroalkanes 2, which are versatile precursors for chemical synthesis.
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Affiliation(s)
- Shengkun Li
- Institute of Pesticide Science and College of Science, Northwest Agriculture & Forestry University, Yangling, Shaanxi 712100, China
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Li S, Huang K, Cao B, Zhang J, Wu W, Zhang X. Highly Enantioselective Hydrogenation of β,β‐Disubstituted Nitroalkenes. Angew Chem Int Ed Engl 2012. [DOI: 10.1002/ange.201202715] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Affiliation(s)
- Shengkun Li
- Institute of Pesticide Science and College of Science, Northwest Agriculture & Forestry University, Yangling, Shaanxi 712100 (China)
- Department of Chemistry and Chemical Biology and Department of Pharmaceutical Chemistry, Rutgers, the State University of New Jersey, Piscataway, NJ 08854 (USA) http://rutchem.rutgers.edu/∼xumuweb/
| | - Kexuan Huang
- Department of Chemistry and Chemical Biology and Department of Pharmaceutical Chemistry, Rutgers, the State University of New Jersey, Piscataway, NJ 08854 (USA) http://rutchem.rutgers.edu/∼xumuweb/
| | - Bonan Cao
- Department of Chemistry and Chemical Biology and Department of Pharmaceutical Chemistry, Rutgers, the State University of New Jersey, Piscataway, NJ 08854 (USA) http://rutchem.rutgers.edu/∼xumuweb/
| | - Jiwen Zhang
- Institute of Pesticide Science and College of Science, Northwest Agriculture & Forestry University, Yangling, Shaanxi 712100 (China)
| | - Wenjun Wu
- Institute of Pesticide Science and College of Science, Northwest Agriculture & Forestry University, Yangling, Shaanxi 712100 (China)
| | - Xumu Zhang
- Department of Chemistry and Chemical Biology and Department of Pharmaceutical Chemistry, Rutgers, the State University of New Jersey, Piscataway, NJ 08854 (USA) http://rutchem.rutgers.edu/∼xumuweb/
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Jensen CN, Cartwright J, Ward J, Hart S, Turkenburg JP, Ali ST, Allen MJ, Grogan G. A flavoprotein monooxygenase that catalyses a Baeyer-Villiger reaction and thioether oxidation using NADH as the nicotinamide cofactor. Chembiochem 2012; 13:872-8. [PMID: 22416037 DOI: 10.1002/cbic.201200006] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2012] [Indexed: 11/10/2022]
Abstract
A gene from the marine bacterium Stenotrophomonas maltophilia encodes a 38.6 kDa FAD-containing flavoprotein (Uniprot B2FLR2) named S. maltophilia flavin-containing monooxygenase (SMFMO), which catalyses the oxidation of thioethers and also the regioselective Baeyer-Villiger oxidation of the model substrate bicyclo[3.2.0]hept-2-en-6-one. The enzyme was unusual in its ability to employ either NADH or NADPH as nicotinamide cofactor. The K(M) and k(cat) values for NADH were 23.7±9.1 μM and 0.029 s(-1) and 27.3±5.3 μM and 0.022 s(-1) for NADPH. However, k(cat) /K(M) value for the ketone substrate in the presence of 100 μM cofactor was 17 times greater for NADH than for NADPH. SMFMO catalysed the quantitative conversion of 5 mM ketone in the presence of substoichiometric concentrations of NADH with the formate dehydrogenase cofactor recycling system, to give the 2-oxa and 3-oxa lactone products of Baeyer-Villiger reaction in a ratio of 5:1, albeit with poor enantioselectivity. The conversion with NADPH was 15 %. SMFMO also catalysed the NADH-dependent transformation of prochiral aromatic thioethers, giving in the best case, 80 % ee for the transformation of p-chlorophenyl methyl sulfide to its R enantiomer. The structure of SMFMO reveals that the relaxation in cofactor specificity appears to be accomplished by the substitution of an arginine residue, responsible for recognition of the 2'-phosphate on the NADPH ribose in related NADPH-dependent FMOs, with a glutamine residue in SMFMO. SMFMO is thus representative of a separate class of single-component, flavoprotein monooxygenases that catalyse NADH-dependent oxidations from which possible sequences and strategies for developing NADH-dependent biocatalysts for asymmetric oxygenation reactions might be identified.
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Affiliation(s)
- Chantel N Jensen
- Department of Chemistry, University of York, Heslington, York, YO10 5DD, UK
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Pietruszka J, Schölzel M. Ene Reductase-Catalysed Synthesis of (R)-Profen Derivatives. Adv Synth Catal 2012. [DOI: 10.1002/adsc.201100743] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023]
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Oberdorfer G, Steinkellner G, Stueckler C, Faber K, Gruber K. Stereopreferences of Old Yellow Enzymes: Structure Correlations and Sequence Patterns in Enoate Reductases. ChemCatChem 2011. [DOI: 10.1002/cctc.201100141] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Hulley ME, Toogood HS, Fryszkowska A, Mansell D, Stephens GM, Gardiner JM, Scrutton NS. Focused directed evolution of pentaerythritol tetranitrate reductase by using automated anaerobic kinetic screening of site-saturated libraries. Chembiochem 2011; 11:2433-47. [PMID: 21064170 DOI: 10.1002/cbic.201000527] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023]
Abstract
This work describes the development of an automated robotic platform for the rapid screening of enzyme variants generated from directed evolution studies of pentraerythritol tetranitrate (PETN) reductase, a target for industrial biocatalysis. By using a 96-well format, near pure enzyme was recovered and was suitable for high throughput kinetic assays; this enabled rapid screening for improved and new activities from libraries of enzyme variants. Initial characterisation of several single site-saturation libraries targeted at active site residues of PETN reductase, are described. Two mutants (T26S and W102F) were shown to have switched in substrate enantiopreference against substrates (E)-2-aryl-1-nitropropene and α-methyl-trans-cinnamaldehyde, respectively, with an increase in ee (62 % (R) for W102F). In addition, the detection of mutants with weak activity against α,β-unsaturated carboxylic acid substrates showed progress in the expansion of the substrate range of PETN reductase. These methods can readily be adapted for rapid evolution of enzyme variants with other oxidoreductase enzymes.
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Affiliation(s)
- Martyn E Hulley
- Faculty of Life Sciences, University of Manchester, 131 Princess Street, Manchester M1 7DN, UK
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Stueckler C, Winkler CK, Hall M, Hauer B, Bonnekessel M, Zangger K, Faber K. Stereo-Controlled Asymmetric Bioreduction of α,β-Dehydroamino Acid Derivatives. Adv Synth Catal 2011. [DOI: 10.1002/adsc.201100042] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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43
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Toogood HS, Fryszkowska A, Hulley M, Sakuma M, Mansell D, Stephens GM, Gardiner JM, Scrutton NS. A Site-Saturated Mutagenesis Study of Pentaerythritol Tetranitrate Reductase Reveals that Residues 181 and 184 Influence Ligand Binding, Stereochemistry and Reactivity. Chembiochem 2011; 12:738-49. [DOI: 10.1002/cbic.201000662] [Citation(s) in RCA: 58] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2010] [Indexed: 11/09/2022]
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Kraußer M, Winkler T, Richter N, Dommer S, Fingerhut A, Hummel W, Gröger H. Combination of CC Bond Formation by Wittig Reaction and Enzymatic CC Bond Reduction in a One-Pot Process in Water. ChemCatChem 2011. [DOI: 10.1002/cctc.201000391] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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45
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Stueckler C, Winkler CK, Bonnekessel M, Faber K. Asymmetric Synthesis of (R)-3-Hydroxy-2-methylpropanoate (‘Roche Ester’) and Derivatives via Biocatalytic CC-Bond Reduction. Adv Synth Catal 2010. [DOI: 10.1002/adsc.201000522] [Citation(s) in RCA: 52] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]
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Toogood H, Gardiner J, Scrutton N. Biocatalytic Reductions and Chemical Versatility of the Old Yellow Enzyme Family of Flavoprotein Oxidoreductases. ChemCatChem 2010. [DOI: 10.1002/cctc.201000094] [Citation(s) in RCA: 250] [Impact Index Per Article: 17.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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Mueller N, Stueckler C, Hauer B, Baudendistel N, Housden H, Bruce N, Faber K. The Substrate Spectra of Pentaerythritol Tetranitrate Reductase, Morphinone Reductase,N-Ethylmaleimide Reductase and Estrogen-Binding Protein in the Asymmetric Bioreduction of Activated Alkenes. Adv Synth Catal 2010. [DOI: 10.1002/adsc.200900832] [Citation(s) in RCA: 73] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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Bougioukou D, Kille S, Taglieber A, Reetz M. Directed Evolution of an Enantioselective Enoate-Reductase: Testing the Utility of Iterative Saturation Mutagenesis. Adv Synth Catal 2009. [DOI: 10.1002/adsc.200900644] [Citation(s) in RCA: 150] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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Adalbjörnsson BV, Toogood HS, Fryszkowska A, Pudney CR, Jowitt TA, Leys D, Scrutton NS. Biocatalysis with Thermostable Enzymes: Structure and Properties of a Thermophilic ‘ene’-Reductase related to Old Yellow Enzyme. Chembiochem 2009; 11:197-207. [DOI: 10.1002/cbic.200900570] [Citation(s) in RCA: 96] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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50
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Fryszkowska A, Toogood H, Sakuma M, Gardiner J, Stephens G, Scrutton N. Asymmetric Reduction of Activated Alkenes by Pentaerythritol Tetranitrate Reductase: Specificity and Control of Stereochemical Outcome by Reaction Optimisation. Adv Synth Catal 2009. [DOI: 10.1002/adsc.200900574] [Citation(s) in RCA: 102] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022]
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