Accretion Product Formation from Self- and Cross-Reactions of RO2 Radicals in the Atmosphere

Can we achieve atmospheric chemical environments in the laboratory? An integrated model-measurement approach to chamber SOA studies

Secondary organic aerosol (SOA), atmospheric particulate matter formed from low-volatility products of volatile organic compound (VOC) oxidation, affects both air quality and climate. Current 3D models, however, cannot reproduce the observed variability in atmospheric organic aerosol. Because many SOA model descriptions are derived from environmental chamber experiments, our ability to represent atmospheric conditions in chambers directly affects our ability to assess the air quality and climate impacts of SOA. Here, we develop an approach that leverages global modeling and detailed mechanisms to design chamber experiments that mimic the atmospheric chemistry of organic peroxy radicals (RO2), a key intermediate in VOC oxidation. Drawing on decades of laboratory experiments, we develop a framework for quantitatively describing RO2 chemistry and show that no previous experimental approaches to studying SOA formation have accessed the relevant atmospheric RO2 fate distribution. We show proof-of-concept experiments that demonstrate how SOA experiments can access a range of atmospheric chemical environments and propose several directions for future studies.

Dimeric product formation in the self-reaction of small peroxy radicals using synchrotron radiation vacuum ultraviolet photoionization mass spectrometry

Peroxy radicals (RO2) are key reactive intermediates in atmospheric oxidation processes and yet their chemistry is not fully unraveled. Little is known about their structures and the structures of the dimeric products (ROOR) in the self-reaction of small RO2, which are among the most abundant RO2 in the atmosphere. The product branching ratios of ROOR and their atmospheric roles are still in controversy. Here, the self-reaction of propyl peroxy radicals (C3H7O2), a typical small RO2 radical in the atmosphere, has been studied using synchrotron radiation vacuum ultraviolet photoionization mass spectrometry. Both radical (C3H7O) and closed-shell molecular (C3H6O, C3H7OH, C3H7OOC3H7) products in the self-reaction are observed in photoionization mass spectra and their elusive isomers are definitely identified in mass-selected photoionization spectra. Three isomers of the C3H7OOC3H7 dimeric products, R1OOR1, R1OOR2, and R2OOR2 (R1 and R2 represent 1-C3H7 and 2-C3H7, respectively), as well as their complex structures have been determined for the first time. Kinetic experiments are performed and compared with chemical simulations to reveal the sources of specific products. The branching ratio of the C3H7OOC3H7 dimeric channel is measured at 10 ± 5%. This work demonstrates that the dimeric product formation in the self-reaction of small RO2 radicals is non-negligible and should provide valuable new insight into atmospheric modelling.

Recent advances in mass spectrometry techniques for atmospheric chemistry research on molecular-level

The Earth's atmosphere is composed of an enormous variety of chemical species associated with trace gases and aerosol particles whose composition and chemistry have critical impacts on the Earth's climate, air quality, and human health. Mass spectrometry analysis as a powerful and popular analytical technique has been widely developed and applied in atmospheric chemistry for decades. Mass spectrometry allows for effective detection, identification, and quantification of a broad range of organic and inorganic chemical species with high sensitivity and resolution. In this review, we summarize recently developed mass spectrometry techniques, methods, and applications in atmospheric chemistry research in the past several years on molecular-level. Specifically, new developments of ion-molecule reactors, various soft ionization methods, and unique coupling with separation techniques are highlighted. The new mass spectrometry applications in laboratory studies and field measurements focused on improving the detection limits for traditional and emerging volatile organic compounds, characterizing multiphase highly oxygenated molecules, and monitoring particle bulk and surface compositions.

Towards automated inclusion of autoxidation chemistry in models: from precursors to atmospheric implications

In the last few decades, atmospheric formation of secondary organic aerosols (SOA) has gained increasing attention due to their impact on air quality and climate. However, methods to predict their abundance are mainly empirical and may fail under real atmospheric conditions. In this work, a close-to-mechanistic approach allowing SOA quantification is presented, with a focus on a chain-like chemical reaction called "autoxidation". A novel framework is employed to (a) describe the gas-phase chemistry, (b) predict the products' molecular structures and (c) explore the contribution of autoxidation chemistry on SOA formation under various conditions. As a proof of concept, the method is applied to benzene, an important anthropogenic SOA precursor. Our results suggest autoxidation to explain up to 100% of the benzene-SOA formed under low-NO x laboratory conditions. Under atmospheric-like day-time conditions, the calculated benzene-aerosol mass continuously forms, as expected based on prior work. Additionally, a prompt increase, driven by the NO3 radical, is predicted by the model at dawn. This increase has not yet been explored experimentally and stresses the potential for atmospheric SOA formation via secondary oxidation of benzene by O3 and NO3.

1-Hexene Ozonolysis across Atmospheric and Combustion Temperatures via Synchrotron-Based Photoelectron Spectroscopy and Chemical Ionization Mass Spectrometry

This study investigates the complex interaction between ozone and the autoxidation of 1-hexene over a wide temperature range (300-800 K), overlapping atmospheric and combustion regimes. It is found that atmospheric molecular mechanisms initiate the oxidation of 1-hexene from room temperature up to combustion temperatures, leading to the formation of highly oxygenated organic molecules. As temperature rises, the highly oxygenated organic molecules contribute to radical-branching decomposition pathways inducing a high reactivity in the low-temperature combustion region, i.e., from 550 K. Above 650 K, the thermal decomposition of ozone into oxygen atoms becomes the dominant process, and a remarkable enhancement of the conversion is observed due to their diradical nature, counteracting the significant negative temperature coefficient behavior usually observed for 1-hexene. In order to better characterize the formation of heavy oxygenated organic molecules at the lowest temperatures, two analytical performance methods have been combined for the first time: synchrotron-based mass-selected photoelectron spectroscopy and orbitrap chemical ionization mass spectrometry. At the lowest studied temperatures (below 400 K), this analytical work has demonstrated the formation of the ketohydroperoxides usually found during the LTC oxidation of 1-hexene, as well as of molecules containing up to nine O atoms.

Interactions of peroxy radicals from monoterpene and isoprene oxidation simulated in the radical volatility basis set

Isoprene affects new particle formation rates in environments and experiments also containing monoterpenes. For the most part, isoprene reduces particle formation rates, but the reason is debated. It is proposed that due to its fast reaction with OH, isoprene may compete with larger monoterpenes for oxidants. However, by forming a large amount of peroxy-radicals (RO2), isoprene may also interfere with the formation of the nucleating species compared to a purely monoterpene system. We explore the RO2 cross reactions between monoterpene and isoprene oxidation products using the radical Volatility Basis Set (radical-VBS), a simplified reaction mechanism, comparing with observations from the CLOUD experiment at CERN. We find that isoprene interferes with covalently bound C20 dimers formed in the pure monoterpene system and consequently reduces the yields of the lowest volatility (Ultra Low Volatility Organic Carbon, ULVOC) VBS products. This in turn reduces nucleation rates, while having less of an effect on subsequent growth rates.

Gas-Phase Oxidation of Atmospherically Relevant Unsaturated Hydrocarbons by Acyl Peroxy Radicals

This study assesses the atmospheric impact of reactions between unsaturated hydrocarbons such as isoprene and monoterpenes and peroxy radicals containing various functional groups. We find that reactions between alkenes and acyl peroxy radicals have reaction rates high enough to be feasible in the atmosphere and lead to high molar mass accretion products. Moreover, the reaction between unsaturated hydrocarbons and acyl peroxy radicals leads to an alkyl radical, to which molecular oxygen rapidly adds. This finding is confirmed by both theoretical calculations and experiments. The formed perester peroxy radical may either undergo further H-shift reactions or react bimolecularly. The multifunctional oxygenated compounds formed through acyl peroxy radical + alkene reactions are potentially important contributors to particle formation and growth. Thus, acyl peroxy radical-initiated oxidation chemistry may need to be included in atmospheric models.

Fostering a Holistic Understanding of the Full Volatility Spectrum of Organic Compounds from Benzene Series Precursors through Mechanistic Modeling

A comprehensive understanding of the full volatility spectrum of organic oxidation products from the benzene series precursors is important to quantify the air quality and climate effects of secondary organic aerosol (SOA) and new particle formation (NPF). However, current models fail to capture the full volatility spectrum due to the absence of important reaction pathways. Here, we develop a novel unified model framework, the integrated two-dimensional volatility basis set (I2D-VBS), to simulate the full volatility spectrum of products from benzene series precursors by simultaneously representing first-generational oxidation, multigenerational aging, autoxidation, dimerization, nitrate formation, etc. The model successfully reproduces the volatility and O/C distributions of oxygenated organic molecules (OOMs) as well as the concentrations and the O/C of SOA over wide-ranging experimental conditions. In typical urban environments, autoxidation and multigenerational oxidation are the two main pathways for the formation of OOMs and SOA with similar contributions, but autoxidation contributes more to low-volatility products. NOx can reduce about two-thirds of OOMs and SOA, and most of the extremely low-volatility products compared to clean conditions, by suppressing dimerization and autoxidation. The I2D-VBS facilitates a holistic understanding of full volatility product formation, which helps fill the large gap in the predictions of organic NPF, particle growth, and SOA formation.

Photooxidation-Initiated Aqueous-Phase Formation of Organic Peroxides: Delving into Formation Mechanisms

Formation of highly oxygenated molecules (HOMs) such as organic peroxides (ROOR, ROOH, and H2O2) is known to degrade food and organic matter. Gas-phase unimolecular autoxidation and bimolecular RO2 + HO2/RO2 reactions are prominently renowned mechanisms associated with the formation of peroxides. However, the reaction pathways and conditions favoring the generation of peroxides in the aqueous phase need to be evaluated. Here, we identified bulk aqueous-phase ROOHs in varying organic precursors, including a laboratory model compound and monoterpene oxidation products. Our results show that formation of ROOHs is suppressed at enhanced oxidant concentrations but exhibits complex trends at elevated precursor concentrations. Furthermore, we observed an exponential increase in the yield of ROOHs when UV light with longer wavelengths was used in the experiment, comparing UVA, UVB, and UVC. Water-soluble organic compounds represent a significant fraction of ambient cloud-water components (up to 500 μM). Thus, the reaction pathways facilitating the formation of HOMs (i.e., ROOHs) during the aqueous-phase oxidation of water-soluble species add to the climate and health burden of atmospheric particulate matter.

Multireference and Coupled-Cluster Study of Dimethyltetroxide (MeO4Me) Formation and Decomposition

Peroxyl radicals (RO2) are important intermediates in the atmospheric oxidation processes. The RO2 can react with other RO2 to form reactive intermediates known as tetroxides, RO4R. The reaction mechanisms of RO4R formation and its various decomposition channels have been investigated in multiple computational studies, but previous approaches have not been able to provide a unified methodology that is able to connect all relevant reactions together. An apparent difficulty in modeling the RO4R formation and its decomposition is the involvement of open-shell singlet electronic states along the reaction pathway. Modeling such electronic states requires multireference (MR) methods, which we use in the present study to investigate in detail a model reaction of MeO2 + MeO2 → MeO4Me, and its decomposition, MeO4Me → MeO + O2 + MeO, as well as the two-body product complexes MeO···O2 + MeO and MeO···MeO + O2. The used MR methods are benchmarked against relative energies of MeO2 + MeO2, MeO4Me, and MeO + MeO + O2, calculated with CCSD(T)/CBS, W2X, and W3X-L methods. We found that the calculated relative energies of the overall MeO2 + MeO2 → MeO4Me → MeO + O2 + MeO reaction are very sensitive to the chosen MR method and that the CASPT2(22e,14o)-IPEA method is able to reproduce the relative energies obtained by the various coupled-cluster methods. Furthermore, CASPT2(22e,14o)-IPEA and W3X-L results show that the MeO···O2 product complex + MeO is lower in energy than the MeO···MeO complex + O2. The formation of MeO4Me is exothermic, and its decomposition is endothermic, relative to the tetroxide. Both the formation and decomposition reactions appear to follow pathways with no saddle points. According to potential energy surface scans of the decomposition pathway, the concerted cleavage of both MeO···O bonds in MeO4Me is energetically preferred over the corresponding sequential decomposition.

Furan-based fluorescent probe free radical capture membrane: Analysis of RO2 radical composition and transformation mechanism in urban atmosphere

Peroxyl radicals (RO2) are important components of atmospheric radical cycling and generation, but their formation, distribution and evolution mechanisms in the atmospheric environment have not been investigated. In this paper, we propose a novel atmospheric RO2 radical trapping membrane that can trap low carbon number (Rc ≤ 5) RO2 radicals and identify their R-group structures by fluorescence spectroscopy and chromatography. We also analyzed the composition and evolution mechanism of RO2 species under different meteorological conditions in the atmospheric environment of Lanzhou, China, to provide scientific support for the treatment and research of atmospheric chemical pollution.

Oligomer formation from cross-reaction of Criegee intermediates in the styrene-isoprene-O3 mixed system

Alkene ozonolysis can produce stabilized Criegee intermediates (SCIs), which play a key role in oligomers' formation. Though styrene and isoprene coexist in the ambient atmosphere as important anthropogenic and biogenic secondary organic aerosol (SOA) precursors, respectively, their cross-reactions have not received attention. This study investigated the interactions of SCIs from styrene and isoprene ozonolysis for the first time. The high-resolution Orbitrap mass spectrometer was used to determine the unique ion mass spectra of the isoprene-styrene-O3 mixture. The results show that the signal intensities of new ions account for >8.4% of total ions in the mass spectra of the styrene-isoprene-O3 mixed system. Styrene and isoprene ozonolysis can produce characteristic C7-SCI and C4-SCI, respectively. C7-SCI and C4-SCI can be involved in the cross-reactions, and the results of tandem mass spectra directly confirmed both C7-SCI and C4-SCI as chain units. The O/C and H/C ratios of cross-products are in the range of 0.38-1.07 and 1.00-1.50, respectively, which are consistent with cross-reaction products. Adding a C7-SCI unit reduces the oligomer's volatility by 1.3-1.4 orders of magnitude lower than adding a C4-SCI unit. Thus, C4-SCI can compete with C7-SCI to react with styrene-derived RO2/RC(O)OH to produce more volatile cross-products, while the less volatile cross-products can be formed when isoprene-derived RO2/RC(O)OH reacted with C7-SCI instead of C4-SCI. The SOA yield of the mixed system is lower than that of the single styrene-O3 system but higher than that of the single isoprene-O3 system. Ambient particles were also collected, and 5 possible SCI-related cross-products were identified. This study illustrates the effects of SCI-related cross-reactions on SOA components and physicochemical properties, providing a basis for future research on SCI-related cross-reactions that frequently occur in the ambient atmosphere.

Nitrate Radicals Suppress Biogenic New Particle Formation from Monoterpene Oxidation

Highly oxygenated organic molecules (HOMs) are a major source of new particles that affect the Earth's climate. HOM production from the oxidation of volatile organic compounds (VOCs) occurs during both the day and night and can lead to new particle formation (NPF). However, NPF involving organic vapors has been reported much more often during the daytime than during nighttime. Here, we show that the nitrate radicals (NO3), which arise predominantly at night, inhibit NPF during the oxidation of monoterpenes based on three lines of observational evidence: NPF experiments in the CLOUD (Cosmics Leaving OUtdoor Droplets) chamber at CERN (European Organization for Nuclear Research), radical chemistry experiments using an oxidation flow reactor, and field observations in a wetland that occasionally exhibits nocturnal NPF. Nitrooxy-peroxy radicals formed from NO3 chemistry suppress the production of ultralow-volatility organic compounds (ULVOCs) responsible for biogenic NPF, which are covalently bound peroxy radical (RO2) dimer association products. The ULVOC yield of α-pinene in the presence of NO3 is one-fifth of that resulting from ozone chemistry alone. Even trace amounts of NO3 radicals, at sub-parts per trillion level, suppress the NPF rate by a factor of 4. Ambient observations further confirm that when NO3 chemistry is involved, monoterpene NPF is completely turned off. Our results explain the frequent absence of nocturnal biogenic NPF in monoterpene (α-pinene)-rich environments.

Atmospheric Gas-Phase Formation of Methanesulfonic Acid

Despite its impact on the climate, the mechanism of methanesulfonic acid (MSA) formation in the oxidation of dimethyl sulfide (DMS) remains unclear. The DMS + OH reaction is known to form methanesulfinic acid (MSIA), methane sulfenic acid (MSEA), the methylthio radical (CH3S), and hydroperoxymethyl thioformate (HPMTF). Among them, HPMTF reacts further to form SO2 and OCS, while the other three form the CH3SO2 radical. Based on theoretical calculations, we find that the CH3SO2 radical can add O2 to form CH3S(O)2OO, which can react further to form MSA. The branching ratio is highly temperature sensitive, and the MSA yield increases with decreasing temperature. In warmer regions, SO2 is the dominant product of DMS oxidation, while in colder regions, large amounts of MSA can form. Global modeling indicates that the proposed temperature-sensitive MSA formation mechanism leads to a substantial increase in the simulated global atmospheric MSA formation and burden.

Gas phase H+, H3O+ and NH4+ affinities of oxygen-bearing volatile organic compounds; DFT calculations for soft chemical ionisation mass spectrometry

Quantum chemistry calculations were performed using the density functional theory, DFT, to understand the structures and energetics of organic ions relevant to gas phase ion chemistry in soft chemical ionisation mass spectrometry analytical methods. Geometries of a range of neutral volatile organic compound molecules and ions resulting from protonation, the addition of H3O+ and the addition of NH4+ were optimised using the B3LYP hybrid DFT method. Then, the total energies and the normal mode vibrational frequencies were determined, and the total enthalpies of the neutral molecules and ions were calculated for the standard temperature and pressure. The calculations were performed for several feasible structures of each of the ions. The proton affinities of several benchmark molecules agree with the accepted values within ±4 kJ mol-1, indicating that B3LYP/6-311++G(d,p) provides chemical accuracy for oxygen-containing volatile organic compounds. It was also found that the binding energies of H3O+ and NH4+ to molecules correlate with their proton affinities. The results contribute to the understanding of ligand switching ion-molecule reactions important for secondary electrospray ionisation, SESI, and selected ion flow tube, SIFT, mass spectrometries.

Acetonyl Peroxy and Hydroperoxy Self- and Cross-Reactions: Temperature-Dependent Kinetic Parameters, Branching Fractions, and Chaperone Effects

The temperature-dependent kinetic parameters, branching fractions, and chaperone effects of the self- and cross-reactions between acetonyl peroxy (CH3C(O)CH2O2) and hydro peroxy (HO2) have been studied using pulsed laser photolysis coupled with infrared (IR) wavelength-modulation spectroscopy and ultraviolet absorption (UVA) spectroscopy. Two IR lasers simultaneously monitored HO2 and hydroxyl (OH), while UVA measurements monitored CH3C(O)CH2O2. For the CH3C(O)CH2O2 self-reaction (T = 270-330 K), the rate parameters were determined to be A = (1.5-0.3+0.4) × 10-13 and Ea/R = -996 ± 334 K and the branching fraction to the alkoxy channel, k2b/k2, showed an inverse temperature dependence following the expression, k2b/k2 = (2.27 ± 0.62) - [(6.35 ± 2.06) × 10-3] T(K). For the reaction between CH3C(O)CH2O2 and HO2 (T = 270-330 K), the rate parameters were determined to be A = (3.4-1.5+2.5) × 10-13 and Ea/R = -547 ± 415 K for the hydroperoxide product channel and A = (6.23-4.4+15.3) × 10-17 and Ea/R = -3100 ± 870 K for the OH product channel. The branching fraction for the OH channel, k1b /k1, follows the temperature-dependent expression, k1b/k1 = (3.27 ± 0.51) - [(9.6 ± 1.7) × 10-3] T(K). Determination of these parameters required an extensive reaction kinetics model which included a re-evaluation of the temperature dependence of the HO2 self-reaction chaperone enhancement parameters due to the methanol-hydroperoxy complex. The second-law thermodynamic parameters for KP,M for the formation of the complex were found to be ΔrH250K° = -38.6 ± 3.3 kJ mol-1 and ΔrS250K° = -110.5 ± 13.2 J mol-1 K-1, with the third-law analysis yielding ΔrH250K° = -37.5 ± 0.25 kJ mol-1. The HO2 self-reaction rate coefficient was determined to be k4 = (3.34-0.80+1.04) × 10-13 exp [(507 ± 76)/T]cm3 molecule-1 s-1 with the enhancement term k4,M″ = (2.7-1.7+4.7) × 10-36 exp [(4700 ± 255)/T]cm6 molecule-2 s-1, proportional to [CH3OH], over T = 220-280 K. The equivalent chaperone enhancement parameter for the acetone-hydroperoxy complex was also required and determined to be k4,A″ = (5.0 × 10-38 - 1.4 × 10-41) exp[(7396 ± 1172)/T] cm6 molecule-2 s-1, proportional to [CH3C(O)CH3], over T = 270-296 K. From these parameters, the rate coefficients for the reactions between HO2 and the respective complexes over the given temperature ranges can be estimated: for HO2·CH3OH, k12 = [(1.72 ± 0.050) × 10-11] exp [(314 ± 7.2)/T] cm3 molecule-1 s-1 and for HO2·CH3C(O)CH3, k15 = [(7.9 ± 0.72) × 10-17] exp [(3881 ± 25)/T] cm3 molecule-1 s-1. Lastly, an estimate of the rate coefficient for the HO2·CH3OH self-reaction was also determined to be k13 = (1.3 ± 0.45) × 10-10 cm3 molecule-1 s-1.

Direct sulfuric acid formation from the gas-phase oxidation of reduced-sulfur compounds

Sulfuric acid represents a fundamental precursor for new nanometre-sized atmospheric aerosol particles. These particles, after subsequent growth, may influence Earth´s radiative forcing directly, or indirectly through affecting the microphysical and radiative properties of clouds. Currently considered formation routes yielding sulfuric acid in the atmosphere are the gas-phase oxidation of SO2 initiated by OH radicals and by Criegee intermediates, the latter being of little relevance. Here we report the observation of immediate sulfuric acid production from the OH reaction of emitted organic reduced-sulfur compounds, which was speculated about in the literature for decades. Key intermediates are the methylsulfonyl radical, CH3SO2, and, even more interestingly, its corresponding peroxy compound, CH3SO2OO. Results of modelling for pristine marine conditions show that oxidation of reduced-sulfur compounds could be responsible for up to ∼50% of formed gas-phase sulfuric acid in these areas. Our findings provide a more complete understanding of the atmospheric reduced-sulfur oxidation.

Dimeric Product of Peroxy Radical Self-Reaction Probed with VUV Photoionization Mass Spectrometry and Theoretical Calculations: The Case of C2H5OOC2H5

Organic peroxy radicals (RO₂) as key intermediates in tropospheric chemistry exert a controlling influence on the cycling of atmospheric reactive radicals and the production of secondary pollutants, such as ozone and secondary organic aerosols (SOA). Herein, we present a comprehensive study of the self-reaction of ethyl peroxy radicals (C₂H₅O₂) by using advanced vacuum ultraviolet (VUV) photoionization mass spectrometry in combination with theoretical calculations. A VUV discharge lamp in Hefei and synchrotron radiation at the Swiss Light Source (SLS) are employed as the photoionization light sources, combined with a microwave discharge fast flow reactor in Hefei and a laser photolysis reactor at the SLS. The dimeric product, C₂H₅OOC₂H₅, as well as other products, CH₃CHO, C₂H₅OH and C₂H₅O, formed from the self-reaction of C₂H₅O₂ are clearly observed in the photoionization mass spectra. Two kinds of kinetic experiments have been performed in Hefei by either changing the reaction time or the initial concentration of C₂H₅O₂ radicals to confirm the origins of the products and to validate the reaction mechanisms. Based on the fitting of the kinetic data with the theoretically calculated results and the peak area ratios in the photoionization mass spectra, a branching ratio of 10 ± 5% for the pathway leading to the dimeric product C₂H₅OOC₂H₅ is measured. In addition, the adiabatic ionization energy (AIE) of C₂H₅OOC₂H₅ is determined at 8.75 ± 0.05 eV in the photoionization spectrum with the aid of Franck-Condon calculations and its structure is revealed here for the first time. The potential energy surface of the C₂H₅O₂ self-reaction has also been theoretically calculated with a high-level of theory to understand the reaction processes in detail. This study provides a new insight into the direct measurement of the elusive dimeric product ROOR and demonstrates its non-negligible branching ratio in the self-reaction of small RO₂ radicals.

Computational Investigation of Substituent Effects on the Alcohol + Carbonyl Channel of Peroxy Radical Self- and Cross-Reactions

Organic peroxy radicals (RO₂) are key intermediates in atmospheric chemistry and can undergo a large variety of both uni- and bimolecular reactions. One of the least understood reaction classes of RO₂ are their self- and cross-reactions: RO₂ + R'O₂. In our previous work, we have investigated how RO₂ + R'O₂ reactions can lead to the formation of ROOR' accretion products through intersystem crossings and subsequent recombination of a triplet intermediate complex ³(RO···OR'). Accretion products can potentially have very low saturation vapor pressures, and may therefore participate in the formation of aerosol particles. In this work, we investigate the competing H-shift channel, which leads to the formation of more volatile carbonyl and alcohol products. This is one of the main, and sometimes the dominant, RO₂ + R'O₂ reaction channels for small RO₂. We investigate how substituents (R and R' groups) affect the H-shift barriers and rates for a set of ³(RO···OR') complexes. The variation in barrier heights and rates is found to be surprisingly small, and most computed H-shift rates are fast: around 10⁸-10⁹ s^-1. We find that the barrier height is affected by three competing factors: (1) the weakening of the breaking C-H bond due to interactions with adjacent functional groups; (2) the overall binding energy of the ³(RO···OR'), which tends to increase the barrier height; and (3) the thermodynamic stability of the reaction products. We also calculated intersystem crossing rate coefficients (ISC) for the same systems and found that most of them were of the same order of magnitude as the H-shift rates. This suggests that both studied channels are competitive for small and medium-sized RO₂. However, for complex enough R or R' groups, the binding energy effect may render the H-shift channel uncompetitive with intersystem crossings (and thus ROOR' formation), as the rate of the latter, while variable, seems to be largely independent of system size. This may help explain the experimental observation that accretion product formation becomes highly effective for large and multifunctional RO₂.

Effect of OH scavengers on the chemical composition of α-pinene secondary organic aerosol

OH scavengers are extensively used in studies of secondary organic aerosol (SOA) because they create an idealized environment where only a single oxidation pathway is occurring. Here, we present a detailed molecular characterization of SOA produced from α-pinene + O₃ with a variety of OH scavengers using the extractive electrospray time-of-flight mass spectrometer in our atmospheric simulation chamber, which is complemented by characterizing the gas phase composition in flow reactor experiments. Under our experimental conditions, radical chemistry largely controls the composition of SOA. Besides playing their desired role in suppressing the reaction of α-pinene with OH, OH scavengers alter the reaction pathways of radicals produced from α-pinene + O₃. This involves changing the HO₂ : RO₂ ratio, the identity of the RO₂ radicals present, and the RO₂ major sinks. As a result, the use of the OH scavengers has significant effects on the composition of SOA, including inclusions of scavenger molecules in SOA, the promotion of fragmentation reactions, and depletion of dimers formed via α-pinene RO₂-RO₂ reactions. To date fragmentation reactions and inclusion of OH scavenger products into secondary organic aerosol have not been reported in atmospheric simulation chamber studies. Therefore, care should be considered if and when to use an OH scavenger during experiments.

Organic Peroxides in Aerosol: Key Reactive Intermediates for Multiphase Processes in the Atmosphere

Organic peroxides (POs) are organic molecules with one or more peroxide (-O-O-) functional groups. POs are commonly regarded as chemically labile termination products from gas-phase radical chemistry and therefore serve as temporary reservoirs for oxidative radicals (HOx and ROx) in the atmosphere. Owing to their ubiquity, active gas-particle partitioning behavior, and reactivity, POs are key reactive intermediates in atmospheric multiphase processes determining the life cycle (formation, growth, and aging), climate, and health impacts of aerosol. However, there remain substantial gaps in the origin, molecular diversity, and fate of POs due to their complex nature and dynamic behavior. Here, we summarize the current understanding on atmospheric POs, with a focus on their identification and quantification, state-of-the-art analytical developments, molecular-level formation mechanisms, multiphase chemical transformation pathways, as well as environmental and health impacts. We find that interactions with SO2 and transition metal ions are generally the fast PO transformation pathways in atmospheric liquid water, with lifetimes estimated to be minutes to hours, while hydrolysis is particularly important for α-substituted hydroperoxides. Meanwhile, photolysis and thermolysis are likely minor sinks for POs. These multiphase PO transformation pathways are distinctly different from their gas-phase fates, such as photolysis and reaction with OH radicals, which highlights the need to understand the multiphase partitioning of POs. By summarizing the current advances and remaining challenges for the investigation of POs, we propose future research priorities regarding their origin, fate, and impacts in the atmosphere.

Review of technologies and their applications for the speciated detection of RO2 radicals

Peroxy radicals (RO₂), which are formed during the oxidation of volatile organic compounds, play an important role in atmospheric oxidation reactions. Therefore, the measurement of RO₂, especially distinct species of RO₂ radicals, is important and greatly helps the exploration of atmospheric chemistry mechanisms. Although the speciated detection of RO₂ radicals remains challenging, various methods have been developed to study them in detail. These methods can be divided into spectroscopy and mass spectrometry technologies. The spectroscopy methods contain laser-induced fluorescence (LIF), UV-absorption spectroscopy, cavity ring-down spectroscopy (CRDS) and matrix isolation and electron spin resonance (MIESR). The mass spectrometry methods contain chemical ionization atmospheric pressure interface time-of-flight mass spectrometry (CI-APi-TOF), chemical ionization mass spectrometry (CIMS), CI-Orbitrap-MS and the third-generation proton transfer reaction-time-of-flight mass spectrometer (PTR3). This article reviews technologies for the speciated detection of RO₂ radicals and the applications of these methods. In addition, a comparison of these techniques and the reaction mechanisms of some key species are discussed. Finally, possible gaps are proposed that could be filled by future research into speciated RO₂ radicals.

Ozonolysis of α-Pinene and Δ3-Carene Mixtures: Formation of Dimers with Two Precursors

The formation of secondary organic aerosol (SOA) from the structurally similar monoterpenes, α-pinene and Δ³-carene, differs substantially. The aerosol phase is already complex for a single precursor, and when mixtures are oxidized, products, e.g., dimers, may form between different volatile organic compounds (VOCs). This work investigates whether differences in SOA formation and properties from the oxidation of individual monoterpenes persist when a mixture of the monoterpenes is oxidized. Ozonolysis of α-pinene, Δ³-carene, and a 1:1 mixture of them was performed in the Aarhus University Research on Aerosol (AURA) atmospheric simulation chamber. Here, ∼100 ppb of monoterpene was oxidized by 200 ppb O₃ under dark conditions at 20 °C. The particle number concentration and particle mass concentration for ozonolysis of α-pinene exceed those from ozonolysis of Δ³-carene alone, while their mixture results in concentrations similar to α-pinene ozonolysis. Detailed offline analysis reveals evidence of VOC-cross-product dimers in SOA from ozonolysis of the monoterpene mixture: a VOC-cross-product dimer likely composed of the monomeric units cis-caric acid and 10-hydroxy-pinonic acid and a VOC-cross-product dimer ester likely from the monomeric units caronaldehyde and terpenylic acid were tentatively identified by liquid chromatography-mass spectrometry. To improve the understanding of chemical mechanisms determining SOA, it is relevant to identify VOC-cross-products.

A neglected pathway for the accretion products formation in the atmosphere

Highly oxygenated organic molecules (HOM) formed by the autoxidation of α-pinene initiated by OH radicals play an important role in new particle formation. It is believed that the accretion products, ROOR´, formed by the self- and cross-reaction of peroxy radicals (RO₂ + R'O₂ reactions), have extremely low volatility and are more likely to participate in nucleation. However, the mechanism of ROOR´ formation has not been fully demonstrated by experiment or theoretical calculation. Herein, we propose a novel mechanism of RO₂ reacting with α-pinene (RO₂ + α-pinene reactions) that have much lower potential barriers and larger rate constants than the reaction of RO₂ with R'O₂, which explains the ROOR´ formation found in the mass spectrometry experiments. The ROOR´ resulting from the reaction of RO₂ with α-pinene can produce HOM dimers and trimers with a higher oxygen-to‑carbon (O/C) ratio through a autoxidation chain. We also demonstrated that the presence of NO_x and HO₂ radical will reduce the RO₂ concentration, but cannot completely inhibit the formation of HOM monomers and ROOR´. Even if one or both of RO₂ radicals are acyl peroxy radicals (RC(O)O₂), the potential barriers of the reactions between RC(O)O₂ and α-pinene (RC(O)O₂ + α-pinene reactions) are lower than that of RO₂ reacting with RC(O)O₂ (RO₂ + RC(O)O₂ reactions) or RC(O)O₂ self-reactions (RC(O)O₂ + RC(O)O₂ reactions). The current work revealed, for the first time, a mechanism of RO₂/RC(O)O₂ reacting with α-pinene in the atmosphere, which provides new insight into the atmospheric chemistry of accretion products as SOA precursors.

Unexpected significance of a minor reaction pathway in daytime formation of biogenic highly oxygenated organic compounds

Secondary organic aerosol (SOA), formed by oxidation of volatile organic compounds, substantially influence air quality and climate. Highly oxygenated organic molecules (HOMs), particularly those formed from biogenic monoterpenes, contribute a large fraction of SOA. During daytime, hydroxyl radicals initiate monoterpene oxidation, mainly by hydroxyl addition to monoterpene double bonds. Naturally, related HOM formation mechanisms should be induced by that reaction route, too. However, for α-pinene, the most abundant atmospheric monoterpene, we find a previously unidentified competitive pathway under atmospherically relevant conditions: HOM formation is predominately induced via hydrogen abstraction by hydroxyl radicals, a generally minor reaction pathway. We show by observations and theoretical calculations that hydrogen abstraction followed by formation and rearrangement of alkoxy radicals is a prerequisite for fast daytime HOM formation. Our analysis provides an accurate mechanism and yield, demonstrating that minor reaction pathways can become major, here for SOA formation and growth and related impacts on air quality and climate.

Secondary Organic Aerosol Mass Yields from NO3 Oxidation of α-Pinene and Δ-Carene: Effect of RO2 Radical Fate

Dark chamber experiments were conducted to study the SOA formed from the oxidation of α-pinene and Δ-carene under different peroxy radical (RO₂) fate regimes: RO₂ + NO₃, RO₂ + RO₂, and RO₂ + HO₂. SOA mass yields from α-pinene oxidation were <1 to ∼25% and strongly dependent on available OA mass up to ∼100 μg m^-3. The strong yield dependence of α-pinene oxidation is driven by absorptive partitioning to OA and not by available surface area for condensation. Yields from Δ-carene + NO₃ were consistently higher, ranging from ∼10-50% with some dependence on OA for <25 μg m^-3. Explicit kinetic modeling including vapor wall losses was conducted to enable comparisons across VOC precursors and RO₂ fate regimes and to determine atmospherically relevant yields. Furthermore, SOA yields were similar for each monoterpene across the nominal RO₂ + NO₃, RO₂ + RO₂, or RO₂ + HO₂ regimes; thus, the volatility basis sets (VBS) constructed were independent of the chemical regime. Elemental O/C ratios of ∼0.4-0.6 and nitrate/organic mass ratios of ∼0.15 were observed in the particle phase for both monoterpenes in all regimes, using aerosol mass spectrometer (AMS) measurements. An empirical relationship for estimating particle density using AMS-derived elemental ratios, previously reported in the literature for non-nitrate containing OA, was successfully adapted to organic nitrate-rich SOA. Observations from an NO₃^- chemical ionization mass spectrometer (NO₃-CIMS) suggest that Δ-carene more readily forms low-volatility gas-phase highly oxygenated molecules (HOMs) than α-pinene, which primarily forms volatile and semivolatile species, when reacted with NO₃, regardless of RO₂ regime. The similar Δ-carene SOA yields across regimes, high O/C ratios, and presence of HOMs, suggest that unimolecular and multistep processes such as alkoxy radical isomerization and decomposition may play a role in the formation of SOA from Δ-carene + NO₃. The scarcity of peroxide functional groups (on average, 14% of C₁₀ groups carried a peroxide functional group in one test experiment in the RO₂ + RO₂ regime) appears to rule out a major role for autoxidation and organic peroxide (ROOH, ROOR) formation. The consistently substantially lower SOA yields observed for α-pinene + NO₃ suggest such pathways are less available for this precursor. The marked and robust regime-independent difference in SOA yield from two different precursor monoterpenes suggests that in order to accurately model SOA production in forested regions the chemical mechanism must feature some distinction among different monoterpenes.

Kinetics of reactions of NH4 + with some biogenic organic molecules and monoterpenes in helium and nitrogen carrier gases: A potential reagent ion for selected ion flow tube mass spectrometry

RATIONALE

To assess the suitability of NH₄ ⁺ as a reagent ion for trace gas analysis by selected ion flow tube mass spectrometry, SIFT-MS, its ion chemistry must be understood. Thus, rate coefficients and product ions for its reactions with typical biogenic molecules and monoterpenes need to be experimentally determined in both helium, He, and nitrogen, N₂ , carrier gases.

METHODS

NH₄ ⁺ and H₃ O⁺ were generated in a microwave gas discharge through an NH₃ and H₂ O vapour mixture and, after m/z selection, injected into He and N₂ carrier gas. Using the conventional SIFT method, NH₄ ⁺ reactions were then studied with M, the biogenic molecules acetone, 1-propanol, 2-butenal, trans-2-heptenal, heptanal, 2-heptanone, 2,3-heptanedione and 15 monoterpene isomers to obtain rate coefficients, k, and product ion branching ratios. Polarisabilities and dipole moments of the reactant molecules and the enthalpy changes in proton transfer reactions were calculated using density functional theory.

RESULTS

The k values for the reactions of the biogenic molecules were invariably faster in N₂ than in He but similar in both bath gases for the monoterpenes. Adducts NH₄ ⁺ M were the dominant product ions in He and N₂ for the biogenic molecules, whereas both MH⁺ and NH₄ ⁺ M product ions were observed in the monoterpene reactions; the monoterpene ratio correlating (R²  = 0.7) with the proton affinity, PA, of the monoterpene molecule as calculated. The data indicate that this adduct ion formation is the result of bimolecular rather than termolecular association.

CONCLUSIONS

NH₄ ⁺ can be a useful reagent ion for SIFT-MS analyses of molecules with PA(M) < PA(NH₃ ) when the dominant single product ion is the adduct NH₄ ⁺ M. For molecules with PA(M) > PA(NH₃ ), such as monoterpenes, both MH⁺ and NH₄ ⁺ M ions are likely products, which must be determined along with k by experiment.

Self-Reaction of Acetonyl Peroxy Radicals and Their Reaction with Cl Atoms

The rate constant for the self-reaction of the acetonyl peroxy radicals, CH₃C(O)CH₂O₂, has been determined using laser photolysis/continuous wave cavity ring down spectroscopy (cw-CRDS). CH₃C(O)CH₂O₂ radicals have been generated from the reaction of Cl atoms with CH₃C(O)CH₃, and the concentration time profiles of four radicals (HO₂, CH₃O₂, CH₃C(O)O₂, and CH₃C(O)CH₂O₂) have been determined by cw-CRDS in the near-infrared. The rate constant for the self-reaction was found to be k = (5.4 ± 1.4) × 10^-12 cm³ s^-1, in good agreement with a recently published value (Zuraski, K., et al. J. Phys. Chem. A 2020, 124, 8128); however, the branching ratio for the radical path was found to be ϕ_1b = (0.6 ± 0.1), which is well above the recently published value (0.33 ± 0.13). The influence of a fast reaction of Cl atoms with the CH₃C(O)CH₂O₂ radical became evident under some conditions; therefore, this reaction has been investigated in separate experiments. Through the simultaneous fitting of all four radical profiles to a complex mechanism, a very fast rate constant of k = (1.35 ± 0.8) × 10^-10 cm³ s^-1 was found, and experimental results could be reproduced only if Cl atoms would partially react through H-atom abstraction to form the Criegee intermediate with a branching fraction of ϕ_Criegee = (0.55 ± 0.1). Modeling the HO₂ concentration-time profiles was possible only if a subsequent reaction of the Criegee intermediate with CH₃C(O)CH₃ was included in the mechanism leading to HO₂ formation with a rate constant of k = (4.5 ± 2.0) × 10^-14 cm³ s^-1.

Kinetic and Mechanistic Investigations of OH-Initiated Atmospheric Degradation of Methyl Butyl Ketone

Methyl butyl ketone (MBK, 2-hexanone) is a common atmospheric oxygenated volatile organic compound (OVOC) owing to broad industrial applications, but its atmospheric oxidation mechanism remains poorly understood. Herein, the detailed mechanisms and kinetic properties of MBK oxidation initiated by OH radicals and subsequent transformation of the resulting intermediates are performed by employing quantum chemical and kinetic modeling methods. The calculations show that H-abstraction at the C4 position of MBK is more favorable than those at the other positions, with the total rate coefficient of k(T) = 4.13 × 10^-14 exp(1576/T) cm³ molecule^-1 s^-1 at 273-400 K. The dominant pathway of unimolecular degradation of the C-centered alkyl radical is 1,2-acyl group migration. For the isomerization of the peroxy radical RO₂, 1,5- and 1,6-H shifts are more favorable than 1,3- and 1,4-H shifts. The multiconformer rate coefficient k_MC-TST of the first H-shift of the RO₂ radical is estimated to be 1.40 × 10^-3 s^-1 at room temperature. Compared to the H-shifts of analogous aliphatic RO₂ radicals, it can be concluded that the carbonyl group enhances the H-shift rates by as much as 2-4 orders of magnitude. The rate coefficients of the RO₂ radical reaction with the HO₂ radical exhibit a weakly negative temperature dependence, and the pseudo-first-order rate constant k'_HO2 = k_HO2[HO₂] is calculated to be 3.32-22.10 × 10^-3 s^-1 at ambient temperature. The bimolecular reaction of the RO₂ radical with NO leads to the formation of 3-oxo-butanal as the main product with the formation concentration of 2.2-7.4 μg/m³ in urban areas. The predicted pseudo-first-order rate constant k'_NO = k_NO[NO] is 2.20-9.98 s^-1 at room temperature. By comparing the k_MC-TST, k'_HO2, and k'_NO, it can be concluded that reaction with NO is the dominant removal pathway for the RO₂ radical formed from the OH-initiated oxidation of MBK. These findings are expected to deepen our understanding of the photochemical oxidation of ketones under realistic atmospheric conditions.

Energy transfer, pre-reactive complex formation and recombination reactions during the collision of peroxy radicals

In this paper we study collisions between polyatomic radicals - an important process in fields ranging from biology to combustion. Energy transfer, formation of intermediate complexes and recombination reactions are treated, with applications to peroxy radicals in atmospheric chemistry. Multi-reference perturbation theory, supplemented by coupled-cluster calculations, describes the potential energy surfaces with high accuracy, including the interaction of singlet and triplet spin states during radical recombination. Our multi-reference molecular dynamics (MD) trajectories on methyl peroxy radicals confirm the reaction mechanism postulated in earlier studies. Specifically, they show that if suitable pre-reactive complexes are formed, they will rapidly lead to the formation and subsequent decomposition of tetroxide intermediates. However, generating multi-reference MD trajectories is exceedingly computationally demanding, and we cannot adequately sample the whole conformational space. To answer this challenge, we promote the use of a novel simplified semi-empirical MD methodology. It assumes the collision is governed by two states, a singlet (S₀) and a triplet (T₁) state. The method predicts differences between collisions on S₀ and T₁ surfaces, and qualitatively includes not only pre-reactive complex formation, but also recombination processes such as tetroxide formation. Finally, classical MD simulations using force-fields for non-reactive collisions are employed to generate thousands of collision trajectories, to verify that the semi-empirical method is sampling collisions adequately, and to carry out preliminary investigations of larger systems. For systems with low activation energies, the experimental rate coefficient is surprisingly well reproduced by simply multiplying the gas-kinetic collision rate by the simulated probability for long-lived complex formation.

Synthesis and Characterization of Atmospherically Relevant Hydroxy Hydroperoxides

Hydroxy hydroperoxides are formed upon OH oxidation of volatile organic compounds in the atmosphere and may contribute to secondary organic aerosol growth and aqueous phase chemistry after phase transfer to particles. Although the detection methods for oxidized volatile organic compounds improved much over the past decades, the limited availability of synthetic standards for atmospherically relevant hydroxy hydroperoxides prevented comprehensive investigations for the most part. Here, we present a straightforward improved synthetic access to isoprene-derived hydroxy hydroperoxides, i.e., 1,2-ISOPOOH and 4,3-ISOPOOH. Furthermore, we present the first successful synthesis of an α-pinene derived hydroxy hydroperoxide. All products were identified by 1H, 13C NMR spectroscopy for structure elucidation, additional 2D NMR experiments were performed. Furthermore, gas-phase FTIR- and UV/VIS spectra are presented for the first time. Using the measured absorption cross section, the atmospheric photolysis rate of up to 2.1 × 10−3 s−1 was calculated for 1,2-ISOPOOH. Moreover, we present the investigation of synthesized hydroxy hydroperoxides in an aerosol chamber study by online MS techniques, namely PTR-ToFMS and (NO3−)-CI-APi-ToFMS. Fragmentation patterns recorded during these investigations are presented as well. For the (NO3−)-CI-APi-ToFMS, a calibration factor for 1,2-ISOPOOH was calculated as 4.44 × 10−5 ncps·ppbv−1 and a LOD (3σ, 1 min average) = 0.70 ppbv.

Particle Formation from Photooxidation of αpinene, Limonene, and Myrcene

We present measurements of the effect of first-generation secondary organic aerosol (SOA) material on the growth of ∼10 nanometer diameter seed particles composed of sulfuric acid and water. Experiments were performed in an atmospheric pressure, vertically aligned flow reactor where OH was produced from HONO photolysis in the presence of either SO₂ or a monoterpene. For typical conditions, organic compounds at ∼300 ppbv are exposed to photooxidation for a time of ∼80 s at a [OH] of about 6 × 10⁶ cm^-3: thus, oxidation products have minimal OH exposure. The measured size changes of the sulfuric acid seed particles can then be attributed to the uptake of first-generation products. Along with descriptions of the apparatus and the procedure, the analysis to obtain SOA yields by comparing them to growth with H₂SO₄(g) is detailed. Results from photooxidation experiments of αpinene, limonene, and myrcene give SOA yields of 0.040, 0.084, and 0.16, respectively. These SOA yields roughly double with each addition of a double bond to the compound. The αpinene and limonene results are in accord with the results of many previous SOA experiments, while the myrcene SOA yield stands alone. Photooxidation of myrcene also led to significant nucleation, and the species responsible is comparable to H₂SO₄ at a 35% relative humidity in its nucleation capability.

Variability in Aromatic Aerosol Yields under Very Low NOx Conditions at Different HO2/RO2 Regimes

Current chemical transport models generally use a constant secondary organic aerosol (SOA) yield to represent SOA formation from aromatic compounds under low NO_x conditions. However, a wide range of SOA yields (10 to 42%) from m-xylene under low NO_x conditions is observed in this study. The chamber HO₂/RO₂ ratio is identified as a key factor explaining SOA yield variability: higher SOA yields are observed for runs with a higher HO₂/RO₂ ratio. The RO₂ + RO₂ pathway, which can be increasingly significant under low NO_x and HO₂/RO₂ conditions, shows a lower SOA-forming potential compared to the RO₂ + HO₂ pathway. While the traditional low-NO_x chamber experiments are commonly used to represent the RO₂ + HO₂ pathway, this study finds that the impacts of the RO₂ + RO₂ pathway cannot be ignored under certain conditions. We provide guidance on how to best control for these two pathways in conducting chamber experiments to best obtain SOA yield curves and quantify the contributions from each pathway. On the global scale, the chemical transport model GEOS-Chem is used to identify regions characterized by lower surface HO₂/RO₂ ratios, suggesting that the RO₂ + RO₂ pathway is more likely to prove significant to overall SOA yields in those regions. Current models generally do not consider the RO₂ + RO₂ impacts on aromatic SOA formation, but preliminary sensitivity tests with updated SOA yield parameters based on such a pathway suggest that without this consideration, some types of SOA may be overestimated in regions with lower HO₂/RO₂ ratios.

Chemistry of Functionalized Reactive Organic Intermediates in the Earth's Atmosphere: Impact, Challenges, and Progress

The gas-phase oxidation of organic compounds is an important chemical process in the Earth's atmosphere. It governs oxidant levels and controls the production of key secondary pollutants, and hence has major implications for air quality and climate. Organic oxidation is largely controlled by the chemistry of a few reactive intermediates, namely, alkyl (R) radicals, alkoxy (RO) radicals, peroxy (RO₂) radicals, and carbonyl oxides (R₁R₂COO), which may undergo a number of unimolecular and bimolecular reactions. Our understanding of these intermediates, and the reaction pathways available to them, is based largely on studies of unfunctionalized intermediates, formed in the first steps of hydrocarbon oxidation. However, it has become increasingly clear that intermediates with functional groups, which are generally formed later in the oxidation process, can exhibit fundamentally different reactivity than unfunctionalized ones. In this Perspective, we explore the unique chemistry available to functionalized organic intermediates in the Earth's atmosphere. After a brief review of the canonical chemistry available to unfunctionalized intermediates, we discuss how the addition of functional groups can introduce new reactions, either by changing the energetics or kinetics of a given reaction or by opening up new chemical pathways. We then provide examples of atmospheric reaction classes that are available only to functionalized intermediates. Some of these, such as unimolecular H-shift reactions of RO₂ radicals, have been elucidated only relatively recently, and can have important impacts on atmospheric chemistry (e.g., on radical cycling or organic aerosol formation); it seems likely that other, as-yet undiscovered reactions of (multi)functional intermediates may also exist. We discuss the challenges associated with the study of the chemistry of such intermediates and review novel experimental and theoretical approaches that have recently provided (or hold promise for providing) new insights into their atmospheric chemistry. The continued use and development of such techniques and the close collaboration between experimentalists and theoreticians are necessary for a complete, detailed understanding of the chemistry of functionalized intermediates and their impact on major atmospheric chemical processes.

Chemistry of Simple Organic Peroxy Radicals under Atmospheric through Combustion Conditions: Role of Temperature, Pressure, and NOx Level

Organic peroxy radicals (RO₂) are key intermediates in the oxidation of organic compounds in both combustion systems and the atmosphere. While many studies have focused on reactions of RO₂ in specific applications, spanning a relatively limited range of reaction conditions, the generalized behavior of RO₂ radicals across the full range of reaction conditions (temperatures, pressures, and NO levels) has, to our knowledge, never been explored. In this work, two simple model systems, n-propyl peroxy radical and γ-isobutanol peroxy radical, are used to evaluate RO₂ fate using pressure-dependent kinetics. The fate of these radicals was modeled based on literature data over 250-1250 K, 0.01-100 bar, and 1 ppt to 100 ppm of NO, which spans the typical range of atmospheric and combustion conditions. Covering this entire range provides a broad overview of the reactivity of these species under both atmospheric and combustion conditions, as well as under conditions intermediate to the two. A particular focus is on the importance of reactions that were traditionally considered to occur in only one of the two sets of conditions: RO₂ unimolecular isomerization reactions (long known to occur in combustion systems but only recently appreciated in atmospheric systems) and RO₂ bimolecular reactions of RO₂ with NO (thought to occur mainly in atmospheric systems and rarely considered in combustion chemistry).

Highly Oxygenated Organic Nitrates Formed from NO3 Radical-Initiated Oxidation of β-Pinene

The reactions of biogenic volatile organic compounds (BVOC) with the nitrate radicals (NO₃) are major night-time sources of organic nitrates and secondary organic aerosols (SOA) in regions influenced by BVOC and anthropogenic emissions. In this study, the formation of gas-phase highly oxygenated organic molecules-organic nitrates (HOM-ON) from NO₃-initiated oxidation of a representative monoterpene, β-pinene, was investigated in the SAPHIR chamber (Simulation of Atmosphere PHotochemistry In a large Reaction chamber). Six monomer (C = 7-10, N = 1-2, O = 6-16) and five accretion product (C = 17-20, N = 2-4, O = 9-22) families were identified and further classified into first- or second-generation products based on their temporal behavior. The time lag observed in the peak concentrations between peroxy radicals containing odd and even number of oxygen atoms, as well as between radicals and their corresponding termination products, provided constraints on the HOM-ON formation mechanism. The HOM-ON formation can be explained by unimolecular or bimolecular reactions of peroxy radicals. A dominant portion of carbonylnitrates in HOM-ON was detected, highlighting the significance of unimolecular termination reactions by intramolecular H-shift for the formation of HOM-ON. A mean molar yield of HOM-ON was estimated to be 4.8% (-2.6%/+5.6%), suggesting significant HOM-ON contributions to the SOA formation.

Atmospheric Fate of the CH3SOO Radical from the CH3S + O2 Equilibrium

The atmospheric oxidation mechanisms of reduced sulfur compounds are of great importance in the biogeochemical sulfur cycle. The CH₃S radical represents an important intermediate in these oxidation processes. Under atmospheric conditions, CH₃S will predominantly react with O₂ to form the peroxy radical CH₃SOO. The formed CH₃SOO has two competing unimolecular reaction pathways: isomerization to CH₃SO₂, which further decomposes into CH₃ and SO₂, or a hydrogen shift followed by HO₂ loss, leading to CH₂S. Previous theoretical calculations have suggested that CH₂S formation should be the dominant pathway, in disagreement with existing experimental results. Our large active space multireference configuration interaction calculations agree with the experimental results that the formation of CH₃ and SO₂ is the dominant route and the formation of CH₂S and HO₂ can, at most, be a minor pathway. We support the calculations with new experiments starting from the OH + CH₃SH reaction for CH₃S formation under low NO_x conditions and find a SO₂ yield of 0.86 ± 0.18 within our reaction time of 7.9 s. Model simulations of our experiments show that the SO₂ yield converges to 0.98. This combined theoretical and experimental study thus furthers the understanding of the general oxidation mechanisms of sulfur compounds in the atmosphere.

Molecular characterization of ultrafine particles using extractive electrospray time-of-flight mass spectrometry

Aerosol particles negatively affect human health while also having climatic relevance due to, for example, their ability to act as cloud condensation nuclei. Ultrafine particles (diameter D_p < 100 nm) typically comprise the largest fraction of the total number concentration, however, their chemical characterization is difficult because of their low mass. Using an extractive electrospray time-of-flight mass spectrometer (EESI-TOF), we characterize the molecular composition of freshly nucleated particles from naphthalene and β-caryophyllene oxidation products at the CLOUD chamber at CERN. We perform a detailed intercomparison of the organic aerosol chemical composition measured by the EESI-TOF and an iodide adduct chemical ionization mass spectrometer equipped with a filter inlet for gases and aerosols (FIGAERO-I-CIMS). We also use an aerosol growth model based on the condensation of organic vapors to show that the chemical composition measured by the EESI-TOF is consistent with the expected condensed oxidation products. This agreement could be further improved by constraining the EESI-TOF compound-specific sensitivity or considering condensed-phase processes. Our results show that the EESI-TOF can obtain the chemical composition of particles as small as 20 nm in diameter with mass loadings as low as hundreds of ng m⁻³ in real time. This was until now difficult to achieve, as other online instruments are often limited by size cutoffs, ionization/thermal fragmentation and/or semi-continuous sampling. Using real-time simultaneous gas- and particle-phase data, we discuss the condensation of naphthalene oxidation products on a molecular level.

Using real-time simultaneous gas- and particle-phase data, the condensation of naphthalene and β-caryophyllene oxidation products on a molecular level is discussed.

Screening for New Pathways in Atmospheric Oxidation Chemistry with Automated Mechanism Generation

In the Earth's atmosphere, reactive organic carbon undergoes oxidation via a highly complex, multigeneration process, with implications for air quality and climate. Decades of experimental and theoretical studies, primarily on the reactions of hydrocarbons, have led to a canonical understanding of how gas-phase oxidation of organic compounds takes place. Recent research has brought to light a number of examples where the presence of certain functional groups opens up reaction pathways for key radical intermediates, including alkyl radicals, alkoxy radicals, and peroxy radicals, that are substantially different from traditional oxidation mechanisms. These discoveries highlight the need for methods that systematically explore the chemistry of complex, functionalized molecules without being prohibitively expensive. In this work, automated reaction network generation is used as a screening tool for new pathways in atmospheric oxidation chemistry. The reaction mechanism generator (RMG) is used to generate reaction networks for the OH-initiated oxidation of 200 mono- and bifunctionally substituted n-pentanes. The resulting networks are then filtered to highlight the reactions of key radical intermediates that are fast enough to compete with traditional atmospheric removal processes as well as "uncanonical" processes which differ from traditionally accepted oxidation mechanisms. Several recently reported, uncanonical atmospheric mechanisms appear in the RMG dataset. These "proof of concept" results provide confidence in this approach as a tool in the search for overlooked atmospheric oxidation chemistry. Several previously unreported reaction types are also encountered in the dataset. The most potentially atmospherically important of these is a radical-carbonyl ring-closure reaction that produces a highly functionalized cyclic alkoxy radical. This pathway is proposed as a promising target for further study via experiments and more detailed theoretical calculations. The approach presented herein represents a new way to efficiently explore atmospheric chemical space and unearth overlooked reaction steps in atmospheric oxidation.

Trimethylamine Outruns Terpenes and Aromatics in Atmospheric Autoxidation

Autoxidation in the atmosphere has been realized in the last decade as an important process that forms highly oxidized products relevant for the formation of secondary organic aerosol and likely with detrimental human health effects. It is experimentally shown that the OH radical-initiated oxidation of trimethylamine, the most highly emitted amine in the atmosphere, proceeds via rapid autoxidation steps dominating its atmospheric oxidation process. All three methyl groups are functionalized within a timescale of 10 s following the reaction with OH radicals leading to highly oxidized products. The exceptionally large density of functional groups in the oxidized products is expected to define their chemical properties. A detailed reaction mechanism based on theoretical calculations is able to describe the experimental findings. The comparison with results of the reinvestigated OH radical- and ozone-initiated autoxidation of a series of terpenes and aromatics reveals the trimethylamine process as the most efficient one discovered up to now for atmospheric conditions.

Optical Properties of Secondary Organic Aerosol Produced by Nitrate Radical Oxidation of Biogenic Volatile Organic Compounds

Nighttime oxidation of biogenic volatile organic compounds (BVOCs) by nitrate radicals (NO₃·) represents one of the most important interactions between anthropogenic and natural emissions, leading to substantial secondary organic aerosol (SOA) formation. The direct climatic effect of such SOA cannot be quantified because its optical properties and atmospheric fate are poorly understood. In this study, we generated SOA from the NO₃· oxidation of a series BVOCs including isoprene, monoterpenes, and sesquiterpenes. The SOA were subjected to comprehensive online and offline chemical composition analysis using high-resolution mass spectrometry and optical properties measurements using a novel broadband (315-650 nm) cavity-enhanced spectrometer, which covers the wavelength range needed to understand the potential contribution of the SOA to direct radiative forcing. The SOA contained a significant fraction of oxygenated organic nitrates (ONs), consisting of monomers and oligomers that are responsible for the detected light absorption in the 315-400 nm range. The SOA created from β-pinene and α-humulene was further photochemically aged in an oxidation flow reactor. The SOA has an atmospheric photochemical bleaching lifetime of >6.2 h, indicating that some of the ONs in the SOA may serve as atmosphere-stable nitrogen oxide sinks or reservoirs and will absorb and scatter incoming solar radiation during the daytime.

Efficient alkane oxidation under combustion engine and atmospheric conditions

Oxidation chemistry controls both combustion processes and the atmospheric transformation of volatile emissions. In combustion engines, radical species undergo isomerization reactions that allow fast addition of O₂. This chain reaction, termed autoxidation, is enabled by high engine temperatures, but has recently been also identified as an important source for highly oxygenated species in the atmosphere, forming organic aerosol. Conventional knowledge suggests that atmospheric autoxidation requires suitable structural features, like double bonds or oxygen-containing moieties, in the precursors. With neither of these functionalities, alkanes, the primary fuel type in combustion engines and an important class of urban trace gases, are thought to have minor susceptibility to extensive autoxidation. Here, utilizing state-of-the-art mass spectrometry, measuring both radicals and oxidation products, we show that alkanes undergo autoxidation much more efficiently than previously thought, both under atmospheric and combustion conditions. Even at high concentrations of NO_X, which typically rapidly terminates autoxidation in urban areas, the studied C₆-C₁₀ alkanes produce considerable amounts of highly oxygenated products that can contribute to urban organic aerosol. The results of this inter-disciplinary effort provide crucial information on oxidation processes in both combustion engines and the atmosphere, with direct implications for engine efficiency and urban air quality.

Structures and reactivity of peroxy radicals and dimeric products revealed by online tandem mass spectrometry

Organic peroxy radicals (RO₂) play a pivotal role in the degradation of hydrocarbons. The autoxidation of atmospheric RO₂ radicals produces highly oxygenated organic molecules (HOMs), including low-volatility ROOR dimers formed by bimolecular RO₂ + RO₂ reactions. HOMs can initiate and greatly contribute to the formation and growth of atmospheric particles. As a result, HOMs have far-reaching health and climate implications. Nevertheless, the structures and formation mechanism of RO₂ radicals and HOMs remain elusive. Here, we present the in-situ characterization of RO₂ and dimer structure in the gas-phase, using online tandem mass spectrometry analyses. In this study, we constrain the structures and formation pathway of several HOM-RO₂ radicals and dimers produced from monoterpene ozonolysis, a prominent atmospheric oxidation process. In addition to providing insights into atmospheric HOM chemistry, this study debuts online tandem MS analyses as a unique approach for the chemical characterization of reactive compounds, e.g., organic radicals.

Organic peroxy radicals play a pivotal role in producing highly oxygenated organic molecules but the formation mechanisms remain elusive. Here, the authors show in-situ characterization of peroxy radicals and dimer structures in the gas-phase, using online tandem mass spectrometry analyses.

SO2 formation and peroxy radical isomerization in the atmospheric reaction of OH radicals with dimethyl disulfide

The atmospheric reaction of OH radicals with dimethyl disulfide, CH3SSCH3, proceeds primarily via OH addition forming CH3S and CH3SOH as reactive intermediates, and to a lesser extent via H-abstraction resulting in the peroxy radical CH3SSCH2OO in the presence of O2. The latter undergoes a fast two-step isomerization process leading to HOOCH2SSCHO. CH3S and CH3SOH are both converted to SO2 and CH3O2 with near unity yields under atmospheric conditions.

The role of functional groups in the understanding of secondary organic aerosol formation mechanism from α-pinene

The infrared spectra (IR) analysis in combination with electrospray ionization high-resolution orbitrap mass spectra (ESI-HRMS) can provide new insight into the overall structural feature and specific molecules of secondary organic aerosol (SOA). In this study, the functional group signature of SOA produced from OH and O₃ channel oxidation of α-pinene is characterized based on the IR and ESI-HRMS. The IR spectra of SOA from the OH channel show strong absorptions of hydrogen bonded OH groups and weak absorptions of CO groups, while the absorptions of CO are more abundant than OH in the O₃ channel. A linear relationship between the ratio of functional group absorption area (S_O-H/S_C=O) and the group number ratio of n_O-H/n_C=O is obtained. The ratios of n_O-H/n_C=O in the O₃ and H₂O₂ systems of SOA are estimated to be 0.60 and 3.91, respectively. The ESI-HRMS results show that organic acids are the major products in both the O₃ and NO₂ systems. In contrast to the O₃ channel, alcohols are more abundant from the OH channel. The major compounds of SOA from the H₂O₂ system are confirmed to be formed by autoxidation of first generation RO₂ radicals. The n_O-H/n_C=O ratio obtained by IR is in good agreement with that by MS. Thus, the ratio of n_O-H/n_C=O can be used to characterize SOA formation from different oxidation channels. In α-pinene-NO₂ irradiations, the ratio of n_O-H/n_C=O is 0.83, which is quite close to that from the O₃ system, but totally different from that in the H₂O₂ system. This strongly supports that the O₃ channel plays a key role in the formation of SOA from the α-pinene-NO₂ system. The similarity of both products and the n_O-H/n_C=O ratios between the α-pinene-O₃ and α-pinene-NO₂ systems strongly states that a stabilized Criegee intermediate (SCI) is a key factor controlling SOA formation.

Acetonyl Peroxy and Hydro Peroxy Self- and Cross-Reactions: Kinetics, Mechanism, and Chaperone Enhancement from the Perspective of the Hydroxyl Radical Product

Pulsed laser photolysis coupled with infrared (IR) wavelength modulation spectroscopy and ultraviolet (UV) absorption spectroscopy was used to study the kinetics and branching fractions for the acetonyl peroxy (CH₃C(O)CH₂O₂) self-reaction and its reaction with hydro peroxy (HO₂) at a temperature of 298 K and pressure of 100 Torr. Near-IR and mid-IR lasers simultaneously monitored HO₂ and hydroxyl, OH, respectively, while UV absorption measurements monitored the CH₃C(O)CH₂O₂ concentrations. The overall rate constant for the reaction between CH₃C(O)CH₂O₂ and HO₂ was found to be (5.5 ± 0.5) × 10^-12 cm³ molecule^-1 s^-1, and the branching fraction for OH yield from this reaction was directly measured as 0.30 ± 0.04. The CH₃C(O)CH₂O₂ self-reaction rate constant was measured to be (4.8 ± 0.8) × 10^-12 cm³ molecule^-1 s^-1, and the branching fraction for alkoxy formation was inferred from secondary chemistry as 0.33 ± 0.13. An increase in the rate of the HO₂ self-reaction was also observed as a function of acetone (CH₃C(O)CH₃) concentration which is interpreted as a chaperone effect, resulting from hydrogen-bond complexation between HO₂ and CH₃C(O)CH₃. The chaperone enhancement coefficient for CH₃C(O)CH₃ was determined to be k_A^″ = (4.0 ± 0.2) × 10^-29 cm⁶ molecule^-2 s^-1, and the equilibrium constant for HO₂·CH₃C(O)CH₃ complex formation was found to be K_c(R14) = (2.0 ± 0.89) × 10^-18 cm³ molecule^-1; from these values, the rate constant for the HO₂ + HO₂·CH₃C(O)CH₃ reaction was estimated to be (2 ± 1) × 10^-11 cm³ molecule^-1 s^-1. Results from UV absorption cross-section measurements of CH₃C(O)CH₂O₂ and prompt OH radical yields arising from possible oxidation of the CH₃C(O)CH₃-derived alkyl radical are also discussed. Using theoretical methods, no likely pathways for the observed prompt OH radical formation have been found and the prompt OH radical yields thus remain unexplained.

Comparing Reaction Routes for 3(RO···OR') Intermediates Formed in Peroxy Radical Self- and Cross-Reactions

Organic peroxy radicals (RO₂) are key intermediates in the chemistry of the atmosphere. One of the main sink reactions of RO₂ is the recombination reaction RO₂ + R'O₂, which has three main channels (all with O₂ as a coproduct): (1) R_-H═O + R'OH, (2) RO + R'O, and (3) ROOR'. The RO + R'O "alkoxy" channel promotes radical and oxidant recycling, while the ROOR' "dimer" channel leads to low-volatility products relevant to aerosol processes. The ROOR' channel has only recently been discovered to play a role in the gas phase. Recent computational studies indicate that all of these channels first go through an intermediate complex ¹(RO···³O₂···OR'). Here, ³O₂ is very weakly bound and will likely evaporate from the system, giving a triplet cluster of two alkoxy radicals: ³(RO···OR'). In this study, we systematically investigate the three reaction channels for an atmospherically representative set of RO + R'O radicals formed in the corresponding RO₂ + R'O₂ reaction. First, we systematically sample the possible conformations of the RO···OR' clusters on the triplet potential energy surface. Next, we compute energetic parameters and attempt to estimate reaction rate coefficients for the three channels: evaporation/dissociation to RO + R'O, a hydrogen shift leading to the formation of R'_-H═O + ROH, and "spin-flip" (intersystem crossing) leading to, or at least allowing, the formation of ROOR' dimers. While large uncertainties in the computed energetics prevent a quantitative comparison of reaction rates, all three channels were found to be very fast (with typical rates greater than 10⁶ s^-1). This qualitatively demonstrates that the computationally proposed novel RO₂ + R'O₂ reaction mechanism is compatible with experimental data showing non-negligible branching ratios for all three channels, at least for sufficiently complex RO₂.

Atmospheric chemistry of CF2ClO2: a theoretical study on mechanisms and kinetics of the CF2ClO2 + HO2 reaction

The singlet and triplet potential energy surfaces of the HO2 with CF2ClO2 reaction have been probed at the BMC-CCSD/cc-pVTZ level according to the B3LYP/6-311++G(d,p) level obtained geometrical structure. On the singlet PES, the association/dissociation, direct H- abstraction, and SN2 displacement mechanisms have been taken into account. On the triplet PES, SN2 displacement and indirect H- abstraction reaction mechanisms have been investigated and the H- abstraction channel makes more contribution to the CF2ClO2 with HO2 reaction. The rate constants have been computed at 10-10 to 1010 atm and 200-3000 K by RRKM-TST theory. The results show that at T ≤ 600 K, the generation of IM1 (CF2ClO4H) by collisional deactivation is dominant pathway; at high temperatures, the production of P8 (CF2ClOOH + O2(3Σ)) becomes predominate. The predicted data for CF2ClO2 + HO2 agrees closely with available experimental value. Moreover, OH radicals act as inhibitors in the CF2ClOOH→CF2O + HOCl and CF2ClOOH→CFClO + HOF reactions. The dominant products for the reaction of CF2ClOOH + OH are CF2ClO2 + H2O.