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Lau JA, Funk JL. How ecological and evolutionary theory expanded the 'ideal weed' concept. Oecologia 2023; 203:251-266. [PMID: 37340279 PMCID: PMC10684629 DOI: 10.1007/s00442-023-05397-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2023] [Accepted: 05/29/2023] [Indexed: 06/22/2023]
Abstract
Since Baker's attempt to characterize the 'ideal weed' over 50 years ago, ecologists have sought to identify features of species that predict invasiveness. Several of Baker's 'ideal weed' traits are well studied, and we now understand that many traits can facilitate different components of the invasion process, such as dispersal traits promoting transport or selfing enabling establishment. However, the effects of traits on invasion are context dependent. The traits promoting invasion in one community or at one invasion stage may inhibit invasion of other communities or success at other invasion stages, and the benefits of any given trait may depend on the other traits possessed by the species. Furthermore, variation in traits among populations or species is the result of evolution. Accordingly, evolution both prior to and after invasion may determine invasion outcomes. Here, we review how our understanding of the ecology and evolution of traits in invasive plants has developed since Baker's original efforts, resulting from empirical studies and the emergence of new frameworks and ideas such as community assembly theory, functional ecology, and rapid adaptation. Looking forward, we consider how trait-based approaches might inform our understanding of less-explored aspects of invasion biology ranging from invasive species responses to climate change to coevolution of invaded communities.
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Affiliation(s)
- Jennifer A Lau
- Department of Biology and the Environmental Resilience Institute, Indiana University, Bloomington, IN, 47405, USA
| | - Jennifer L Funk
- Department of Plant Sciences, University of California, Davis, CA, 95616, USA.
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2
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Salgado AL, Glassmire AE, Sedio BE, Diaz R, Stout MJ, Čuda J, Pyšek P, Meyerson LA, Cronin JT. Metabolomic Evenness Underlies Intraspecific Differences Among Lineages of a Wetland Grass. J Chem Ecol 2023; 49:437-450. [PMID: 37099216 DOI: 10.1007/s10886-023-01425-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 03/20/2023] [Accepted: 04/05/2023] [Indexed: 04/27/2023]
Abstract
The metabolome represents an important functional trait likely important to plant invasion success, but we have a limited understanding of whether the entire metabolome or targeted groups of compounds confer an advantage to invasive as compared to native taxa. We conducted a lipidomic and metabolomic analysis of the cosmopolitan wetland grass Phragmites australis. We classified features into metabolic pathways, subclasses, and classes. Subsequently, we used Random Forests to identify informative features to differentiate five phylogeographic and ecologically distinct lineages: European native, North American invasive, North American native, Gulf, and Delta. We found that lineages had unique phytochemical fingerprints, although there was overlap between the North American invasive and North American native lineages. Furthermore, we found that divergence in phytochemical diversity was driven by compound evenness rather than metabolite richness. Interestingly, the North American invasive lineage had greater chemical evenness than the Delta and Gulf lineages but lower evenness than the North American native lineage. Our results suggest that metabolomic evenness may represent a critical functional trait within a plant species. Its role in invasion success, resistance to herbivory, and large-scale die-off events common to this and other plant species remain to be investigated.
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Affiliation(s)
- Ana L Salgado
- Department of Biological Sciences, Louisiana State University, Life Sciences Building, Baton Rouge, LA, 70803, USA.
| | - Andrea E Glassmire
- Department of Biological Sciences, Louisiana State University, Life Sciences Building, Baton Rouge, LA, 70803, USA
| | - Brian E Sedio
- Department of Integrative Biology, University of Texas, Austin, TX, 78712, USA
- Smithsonian Tropical Research Institute, Balboa, Ancón, Apartado, 0843-03092, Republic of Panama
| | - Rodrigo Diaz
- Department of Entomology, Louisiana State University, Baton Rouge, LA, 70803, USA
| | - Michael J Stout
- Department of Entomology, Louisiana State University, Baton Rouge, LA, 70803, USA
| | - Jan Čuda
- Department of Invasion Ecology, Czech Academy of Sciences, Institute of Botany, Průhonice, Czech Republic
| | - Petr Pyšek
- Department of Invasion Ecology, Czech Academy of Sciences, Institute of Botany, Průhonice, Czech Republic
- Department of Ecology, Faculty of Science, Charles University, Prague, CZ -128 44, Czech Republic
| | - Laura A Meyerson
- Department of Natural Resource Sciences, University of Rhode Island, Kingston, RI, 02881, USA
| | - James T Cronin
- Department of Biological Sciences, Louisiana State University, Life Sciences Building, Baton Rouge, LA, 70803, USA
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3
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Sejwal G, Singh SK. Perspective: The unexplored dimensions behind the foam formation in River Yamuna, India. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:90458-90470. [PMID: 37479928 DOI: 10.1007/s11356-023-28857-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Accepted: 07/14/2023] [Indexed: 07/23/2023]
Abstract
For nearly two years, a persistent foam cover has been observed during the post-monsoon season in the Yamuna River beneath the barrage near Okhla in Delhi, India. This affair has been a matter of public concern now, after the gigantic appearance of foam in November 2021, as the visibility of foam has awakened people's environmental 'conscience' over the 'concealed' chemical pollution. The mechanisms of agents responsible for foaming in rivers, particularly surfactants and phosphates, have received wide attention in the dynamic community of river pollution. Many studies in the past, around the globe, have evidently provided different rationales behind the dense foam formation in rivers, yet the Concerned Govt. Authorities have highlighted the cause of foam formation in the river Yamuna is associated with the presence of detergents and phosphates as foaming agents. Despite this, an aperture with copious unaccounted factors or underlying agents still exists to rationalize the foam formation and persistence. In this article, we outline these unaccounted factors which might be responsible for the foam formation and stabilization and give indications for future research directives towards the emergence of studies regarding the dense foam formation in river Yamuna.
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Affiliation(s)
- Garima Sejwal
- Department of Environmental Engineering, Delhi Technological University, Delhi, 110042, India.
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4
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Uzelac M, Sladonja B, Šola I, Dudaš S, Bilić J, Famuyide IM, McGaw LJ, Eloff JN, Mikulic-Petkovsek M, Poljuha D. Invasive Alien Species as a Potential Source of Phytopharmaceuticals: Phenolic Composition and Antimicrobial and Cytotoxic Activity of Robinia pseudoacacia L. Leaf and Flower Extracts. PLANTS (BASEL, SWITZERLAND) 2023; 12:2715. [PMID: 37514330 PMCID: PMC10385011 DOI: 10.3390/plants12142715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Revised: 07/18/2023] [Accepted: 07/19/2023] [Indexed: 07/30/2023]
Abstract
Black locust (Robinia pseudoacacia L.), an invasive tree in Europe, commonly known for its negative impact on biodiversity, is a rich source of phenolic compounds recognized in traditional medicine. Since the metabolite profile depends on the environment and climate, this study aimed to provide the first LC-MS phytochemical screening of the black locust from the Istria region (Croatia). The compounds were extracted from leaves and flowers with 70% ethanol and 80% methanol. Total phenolics (TP) and flavonoids (TF), as well as antioxidant capacity (AC) measured by ABTS (17.49-146.41 mg TE/g DW), DPPH (24.67-118.49 mg TE/g DW), and FRAP (7.38-77.53 mg TE/g DW) assays, were higher in leaf than in flower extracts. Higher TP and total non-flavonoid (TNF) values were displayed in ethanolic than in methanolic extracts. In total, 64 compounds were identified, of which flavonols (20) and hydroxycinnamic acid derivatives (15) were the most represented. Flavanols such as catechin dominated in leaf extracts, followed by flavonols, with kaempferol glucuronyl rhamnosyl hexosides as the main compound, respectively. Flower extracts had the highest share of flavones, followed by ellagitannins, with luteolin dirhamnosyl hexosides and vescalagin, respectively, being predominant. The extracts had good quorum sensing, biofilm formation prevention, and eradicating capacity. The results provided new insights into the phytochemical properties of R. pseudoacacia as the first step toward its potential pharmaceutical use.
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Affiliation(s)
- Mirela Uzelac
- Department of Agriculture and Nutrition, Institute of Agriculture and Tourism, Karla Huguesa 8, 52440 Poreč, Croatia
| | - Barbara Sladonja
- Department of Agriculture and Nutrition, Institute of Agriculture and Tourism, Karla Huguesa 8, 52440 Poreč, Croatia
| | - Ivana Šola
- Department of Biology, Faculty of Science, University of Zagreb, 10000 Zagreb, Croatia
| | - Slavica Dudaš
- Agricultural Department, Polytechnic of Rijeka, Karla Huguesa 6, 52440 Poreč, Croatia
| | - Josipa Bilić
- METRIS Research Centre, Istrian University of Applied Sciences, Zagrebačka 30, 52100 Pula, Croatia
| | - Ibukun M Famuyide
- Phytomedicine Programme, Paraclinical Sciences Department, University of Pretoria, P/Bag X04, Onderstepoort, Pretoria 0110, Gauteng, South Africa
| | - Lyndy J McGaw
- Phytomedicine Programme, Paraclinical Sciences Department, University of Pretoria, P/Bag X04, Onderstepoort, Pretoria 0110, Gauteng, South Africa
| | - Jacobus N Eloff
- Phytomedicine Programme, Paraclinical Sciences Department, University of Pretoria, P/Bag X04, Onderstepoort, Pretoria 0110, Gauteng, South Africa
| | - Maja Mikulic-Petkovsek
- Department of Agronomy, Biotechnical Faculty, University of Ljubljana, Jamnikarjeva 101, 1000 Ljubljana, Slovenia
| | - Danijela Poljuha
- Department of Agriculture and Nutrition, Institute of Agriculture and Tourism, Karla Huguesa 8, 52440 Poreč, Croatia
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Wu S, Chen L, Zhou Y, Xiao F, Liu D, Wang Y. Invasive Plants Have Higher Resistance to Native Generalist Herbivores Than Exotic Noninvasive Congeners. ENVIRONMENTAL ENTOMOLOGY 2023; 52:81-87. [PMID: 36545824 DOI: 10.1093/ee/nvac108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Indexed: 06/17/2023]
Abstract
Research on the invasive plant Phytolacca americana (L.) mostly focuses on its medicinal value and enrichment of heavy metals. However, little is known regarding its impact on native herbivorous insects. In this study, we explored the effects of P. americana and the exotic noninvasive Phytolacca icosandra (L.) on the Spodoptera litura (Fabricius) (native tobacco cutworm) via bioassay, oviposition preference, detoxifying enzyme activity analysis, and phytochemical determination. We found that the oviposition preference index (OPI) of S. litura feeding on P. icosandra was higher than that of P. americana. The developmental duration of S. litura feeding on P. icosandra was shorter than that of P. americana. Additionally, the Acetylcholinesterase (AchE) and Glutathione-S-transferase (GST) activities of S. litura feeding on P. americana were higher than that of S. litura feeding on artificial diets or P. icosandra. The content of lignin and flavonoids in P. americana was relatively high, whereas starch content was relatively low. These findings suggest invasive plants have higher resistance to herbivores, thereby suffering less damage than exotic noninvasive plants.
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Affiliation(s)
- Shan Wu
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming 650500, China
- Centre for Invasion Biology, Institute of Biodiversity, Yunnan University, Kunming 650500, China
| | - Li Chen
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming 650500, China
- Centre for Invasion Biology, Institute of Biodiversity, Yunnan University, Kunming 650500, China
| | - Yue Zhou
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming 650500, China
- Centre for Invasion Biology, Institute of Biodiversity, Yunnan University, Kunming 650500, China
| | - Feng Xiao
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming 650500, China
- Centre for Invasion Biology, Institute of Biodiversity, Yunnan University, Kunming 650500, China
| | - Danfeng Liu
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming 650500, China
- Centre for Invasion Biology, Institute of Biodiversity, Yunnan University, Kunming 650500, China
| | - Yi Wang
- Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology, Yunnan University, Kunming 650500, China
- Centre for Invasion Biology, Institute of Biodiversity, Yunnan University, Kunming 650500, China
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6
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Contrasting effects of extracts from invasive Reynoutria japonica on soil microbial biomass, activity, and community structure. Biol Invasions 2022. [DOI: 10.1007/s10530-022-02842-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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7
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Roots of invasive woody plants produce more diverse flavonoids than non-invasive taxa, a global analysis. Biol Invasions 2022. [DOI: 10.1007/s10530-022-02812-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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8
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Distribution Patterns of Essential Oil Terpenes in Native and Invasive Solidago Species and Their Comparative Assessment. PLANTS 2022; 11:plants11091159. [PMID: 35567160 PMCID: PMC9099864 DOI: 10.3390/plants11091159] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/04/2022] [Revised: 04/19/2022] [Accepted: 04/22/2022] [Indexed: 11/17/2022]
Abstract
The importance of invasive Solidago L. species to the environment creates a new approach to controlling their spread through the use of potentially high value raw materials. The aim of this study was to assess the distribution patterns of volatile compounds in the four Solidago spp., by identifying common and species-specific compounds with their potentials, and to confirm the origin of the spontaneous hybrid Solidago × niederederi on the basis of comparative assessment of essential oil (EO) profiles. Plant material in the flowering phase was collected in mixed populations from six different sites. The EOs were isolated separately from the leaf and the inflorescence samples by hydrodistillation for 3 h. The chemical analysis was performed by gas chromatography—mass spectrometry. Multivariate data analysis was employed to explain the interspecies relationships among Solidago spp. The results revealed the similarity among Solidago spp. EO profiles, which were dominated by monoterpenes and oxygenated compound fractions. Solidago spp. differed in species distinctive terpenes and their distribution between accessions and plant parts. Volatile compound patterns confirmed the origin of Solidago × niederederi between Solidago canadensis and Solidago virgaurea, with the higher contribution of alien species than native ones. Correct taxonomic identification of species is highly essential for the targeted collection of raw material from the wild for different applications. Solidago spp. can be considered to be underutilized sources of bioactive secondary metabolites.
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9
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LC–DAD–MS Phenolic Characterisation of Six Invasive Plant Species in Croatia and Determination of Their Antimicrobial and Cytotoxic Activity. PLANTS 2022; 11:plants11050596. [PMID: 35270066 PMCID: PMC8912889 DOI: 10.3390/plants11050596] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/18/2022] [Revised: 02/04/2022] [Accepted: 02/19/2022] [Indexed: 12/03/2022]
Abstract
Invasive plants’ phytochemicals are important for their invasiveness, enabling them to spread in new environments. However, these chemicals could offer many pharmaceutical compounds or active ingredients for herbal preparations. This study provides the first LC–MS phytochemical screening of six invasive alien plant species (IAPS) in the Istria region (Croatia): Ailanthus altissima, Ambrosia artemisiifolia, Conyza canadensis, Dittrichia viscosa, Erigeron annuus, and Xanthium strumarium. The study aims to identify and quantify the phenolic content of their leaf extracts and assess their antimicrobial and cytotoxic potential. A total of 32 species-specific compounds were recorded. Neochlorogenic, chlorogenic, and 5-p-coumaroylquinic acids, quercetin-3-glucoside, and kaempferol hexoside were detected in all the tested IAPS. Hydroxycinnamic acid derivatives were the main components in all the tested IAPS, except in E. annuus, where flavanones dominated with a share of 70%. X. strumarium extract had the best activity against the tested bacteria, with an average MIC value of 0.11 mg/mL, while A. altissima and X. strumarium extracts had the best activity against the tested fungi, with an average MIC value of 0.21 mg/mL in both cases. All the plant extracts studied, except X. strumarium, were less cytotoxic than the positive control. The results provided additional information on the phytochemical properties of IAPS and their potential for use as antimicrobial agents.
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Simberloff D, Kaur H, Kalisz S, Bezemer TM. Novel chemicals engender myriad invasion mechanisms. THE NEW PHYTOLOGIST 2021; 232:1184-1200. [PMID: 34416017 DOI: 10.1111/nph.17685] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Accepted: 08/02/2021] [Indexed: 06/13/2023]
Abstract
Non-native invasive species (NIS) release chemicals into the environment that are unique to the invaded communities, defined as novel chemicals. Novel chemicals impact competitors, soil microbial communities, mutualists, plant enemies, and soil nutrients differently than in the species' native range. Ecological functions of novel chemicals and differences in functions between the native and non-native ranges of NIS are of immense interest to ecologists. Novel chemicals can mediate different ecological, physiological, and evolutionary mechanisms underlying invasion hypotheses. Interactions amongst the NIS and resident species including competitors, soil microbes, and plant enemies, as well as abiotic factors in the invaded community are linked to novel chemicals. However, we poorly understand how these interactions might enhance NIS performance. New empirical data and analyses of how novel chemicals act in the invaded community will fill major gaps in our understanding of the chemistry of biological invasions. A novel chemical-invasion mechanism framework shows how novel chemicals engender invasion mechanisms beyond plant-plant or plant-microorganism interactions.
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Affiliation(s)
- Daniel Simberloff
- Ecology and Evolutionary Biology Department, University of Tennessee, Knoxville, TN, 37996, USA
| | - Harleen Kaur
- Plant BioSystems, Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, T6G 2P5, Canada
| | - Susan Kalisz
- Ecology and Evolutionary Biology Department, University of Tennessee, Knoxville, TN, 37996, USA
| | - T Martijn Bezemer
- Plant Science and Natural Products, Institute of Biology Leiden (IBL), Leiden University, PO Box 9505, Leiden, 2300 RA, the Netherlands
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), PO Box 6700 AB, Wageningen, the Netherlands
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11
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Mounger J, Ainouche ML, Bossdorf O, Cavé-Radet A, Li B, Parepa M, Salmon A, Yang J, Richards CL. Epigenetics and the success of invasive plants. Philos Trans R Soc Lond B Biol Sci 2021; 376:20200117. [PMID: 33866809 PMCID: PMC8059582 DOI: 10.1098/rstb.2020.0117] [Citation(s) in RCA: 39] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/15/2020] [Indexed: 12/12/2022] Open
Abstract
Biological invasions impose ecological and economic problems on a global scale, but also provide extraordinary opportunities for studying contemporary evolution. It is critical to understand the evolutionary processes that underly invasion success in order to successfully manage existing invaders, and to prevent future invasions. As successful invasive species sometimes are suspected to rapidly adjust to their new environments in spite of very low genetic diversity, we are obliged to re-evaluate genomic-level processes that translate into phenotypic diversity. In this paper, we review work that supports the idea that trait variation, within and among invasive populations, can be created through epigenetic or other non-genetic processes, particularly in clonal invaders where somatic changes can persist indefinitely. We consider several processes that have been implicated as adaptive in invasion success, focusing on various forms of 'genomic shock' resulting from exposure to environmental stress, hybridization and whole-genome duplication (polyploidy), and leading to various patterns of gene expression re-programming and epigenetic changes that contribute to phenotypic variation or even novelty. These mechanisms can contribute to transgressive phenotypes, including hybrid vigour and novel traits, and may thus help to understand the huge successes of some plant invaders, especially those that are genetically impoverished. This article is part of the theme issue 'How does epigenetics influence the course of evolution?'
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Affiliation(s)
- Jeannie Mounger
- Department of Integrative Biology, University of South Florida, 4202 E Fowler Avenue, Tampa, FL 33617, USA
| | - Malika L. Ainouche
- UMR CNRS 6553 ECOBIO, OSUR, Université de Rennes 1, Campus Scientifique de Beaulieu, Rennes, France
| | - Oliver Bossdorf
- Plant Evolutionary Ecology, University of Tübingen, 72076 Tübingen, Germany
| | - Armand Cavé-Radet
- UMR CNRS 6553 ECOBIO, OSUR, Université de Rennes 1, Campus Scientifique de Beaulieu, Rennes, France
- Plant Evolutionary Ecology, University of Tübingen, 72076 Tübingen, Germany
| | - Bo Li
- National Observations and Research Station for Wetland Ecosystems of the Yangtze Estuary, and Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, School of Life Sciences, Fudan University, Shanghai 200438, People's Republic of China
| | - Madalin Parepa
- Plant Evolutionary Ecology, University of Tübingen, 72076 Tübingen, Germany
| | - Armel Salmon
- UMR CNRS 6553 ECOBIO, OSUR, Université de Rennes 1, Campus Scientifique de Beaulieu, Rennes, France
| | - Ji Yang
- National Observations and Research Station for Wetland Ecosystems of the Yangtze Estuary, and Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, Institute of Biodiversity Science, School of Life Sciences, Fudan University, Shanghai 200438, People's Republic of China
| | - Christina L. Richards
- Department of Integrative Biology, University of South Florida, 4202 E Fowler Avenue, Tampa, FL 33617, USA
- Plant Evolutionary Ecology, University of Tübingen, 72076 Tübingen, Germany
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Shahrtash M, Brown SP. A Path Forward: Promoting Microbial-Based Methods in the Control of Invasive Plant Species. PLANTS (BASEL, SWITZERLAND) 2021; 10:943. [PMID: 34065068 PMCID: PMC8151036 DOI: 10.3390/plants10050943] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 04/29/2021] [Accepted: 05/06/2021] [Indexed: 01/18/2023]
Abstract
In this review, we discuss the unrealized potential of incorporating plant-microbe and microbe-microbe interactions into invasive plant management strategies. While the development of this as a viable strategy is in its infancy, we argue that incorporation of microbial components into management plans should be a priority and has great potential for diversifying sustainable control options. We advocate for increased research into microbial-mediated phytochemical production, microbial controls to reduce the competitiveness of invasive plants, microbial-mediated increases of herbicidal tolerance of native plants, and to facilitate increased pathogenicity of plant pathogens of invasive plants.
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Affiliation(s)
| | - Shawn P. Brown
- Department of Biological Sciences, The University of Memphis, Memphis, TN 38152, USA;
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13
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LC-MS based plant metabolic profiles of thirteen grassland species grown in diverse neighbourhoods. Sci Data 2021; 8:52. [PMID: 33563993 PMCID: PMC7873126 DOI: 10.1038/s41597-021-00836-8] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2020] [Accepted: 01/19/2021] [Indexed: 12/18/2022] Open
Abstract
In plants, secondary metabolite profiles provide a unique opportunity to explore seasonal variation and responses to the environment. These include both abiotic and biotic factors. In field experiments, such stress factors occur in combination. This variation alters the plant metabolic profiles in yet uninvestigated ways. This data set contains trait and mass spectrometry data of thirteen grassland species collected at four time points in the growing season in 2017. We collected above-ground vegetative material of seven grass and six herb species that were grown in plant communities with different levels of diversity in the Jena Experiment. For each sample, we recorded visible traits and acquired shoot metabolic profiles on a UPLC-ESI-Qq-TOF-MS. We performed the raw data pre-processing in Galaxy-W4M and prepared the data for statistical analysis in R by applying missing data imputation, batch correction, and validity checks on the features. This comprehensive data set provides the opportunity to investigate environmental dynamics across diverse neighbourhoods that are reflected in the metabolomic profile.
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Utermann C, Blümel M, Busch K, Buedenbender L, Lin Y, Haltli BA, Kerr RG, Briski E, Hentschel U, Tasdemir D. Comparative Microbiome and Metabolome Analyses of the Marine Tunicate Ciona intestinalis from Native and Invaded Habitats. Microorganisms 2020; 8:microorganisms8122022. [PMID: 33348696 PMCID: PMC7767289 DOI: 10.3390/microorganisms8122022] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2020] [Revised: 12/09/2020] [Accepted: 12/15/2020] [Indexed: 12/12/2022] Open
Abstract
Massive fouling by the invasive ascidian Ciona intestinalis in Prince Edward Island (PEI, Canada) has been causing devastating losses to the local blue mussel farms. In order to gain first insights into so far unexplored factors that may contribute to the invasiveness of C. intestinalis in PEI, we undertook comparative microbiome and metabolome studies on specific tissues from C. intestinalis populations collected in invaded (PEI) and native regions (Helgoland and Kiel, Germany). Microbial community analyses and untargeted metabolomics revealed clear location- and tissue-specific patterns showing that biogeography and the sampled tissue shape the microbiome and metabolome of C. intestinalis. Moreover, we observed higher microbial and chemical diversity in C. intestinalis from PEI than in the native populations. Bacterial OTUs specific to C. intestinalis from PEI included Cyanobacteria (e.g., Leptolyngbya sp.) and Rhodobacteraceae (e.g., Roseobacter sp.), while populations from native sampling sites showed higher abundances of e.g., Firmicutes (Helgoland) and Epsilonproteobacteria (Kiel). Altogether 121 abundant metabolites were putatively annotated in the global ascidian metabolome, of which 18 were only detected in the invasive PEI population (e.g., polyketides and terpenoids), while six (e.g., sphingolipids) or none were exclusive to the native specimens from Helgoland and Kiel, respectively. Some identified bacteria and metabolites reportedly possess bioactive properties (e.g., antifouling and antibiotic) that may contribute to the overall fitness of C. intestinalis. Hence, this first study provides a basis for future studies on factors underlying the global invasiveness of Ciona species.
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Affiliation(s)
- Caroline Utermann
- GEOMAR Centre for Marine Biotechnology (GEOMAR-Biotech), Research Unit Marine Natural Products Chemistry, GEOMAR Helmholtz Centre for Ocean Research Kiel, Am Kiel-Kanal 44, 24106 Kiel, Germany; (C.U.); (M.B.); (L.B.)
| | - Martina Blümel
- GEOMAR Centre for Marine Biotechnology (GEOMAR-Biotech), Research Unit Marine Natural Products Chemistry, GEOMAR Helmholtz Centre for Ocean Research Kiel, Am Kiel-Kanal 44, 24106 Kiel, Germany; (C.U.); (M.B.); (L.B.)
| | - Kathrin Busch
- Research Unit Marine Symbioses, GEOMAR Helmholtz Centre for Ocean Research Kiel, Duesternbrooker Weg 20, 24105 Kiel, Germany; (K.B.); (U.H.)
| | - Larissa Buedenbender
- GEOMAR Centre for Marine Biotechnology (GEOMAR-Biotech), Research Unit Marine Natural Products Chemistry, GEOMAR Helmholtz Centre for Ocean Research Kiel, Am Kiel-Kanal 44, 24106 Kiel, Germany; (C.U.); (M.B.); (L.B.)
| | - Yaping Lin
- Research Group Invasion Ecology, Research Unit Experimental Ecology, GEOMAR Helmholtz Centre for Ocean Research Kiel, Duesternbrooker Weg 20, 24105 Kiel, Germany; (Y.L.); (E.B.)
- Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, 18 Shuangqing Rd., Haidian District, Beijing 100085, China
| | - Bradley A. Haltli
- Department of Chemistry, University of Prince Edward Island, 550 University Avenue, Charlottetown, PE C1A 4P3, Canada; (B.A.H.); (R.G.K.)
| | - Russell G. Kerr
- Department of Chemistry, University of Prince Edward Island, 550 University Avenue, Charlottetown, PE C1A 4P3, Canada; (B.A.H.); (R.G.K.)
| | - Elizabeta Briski
- Research Group Invasion Ecology, Research Unit Experimental Ecology, GEOMAR Helmholtz Centre for Ocean Research Kiel, Duesternbrooker Weg 20, 24105 Kiel, Germany; (Y.L.); (E.B.)
| | - Ute Hentschel
- Research Unit Marine Symbioses, GEOMAR Helmholtz Centre for Ocean Research Kiel, Duesternbrooker Weg 20, 24105 Kiel, Germany; (K.B.); (U.H.)
- Faculty of Mathematics and Natural Sciences, Kiel University, Christian-Albrechts-Platz 4, 24118 Kiel, Germany
| | - Deniz Tasdemir
- GEOMAR Centre for Marine Biotechnology (GEOMAR-Biotech), Research Unit Marine Natural Products Chemistry, GEOMAR Helmholtz Centre for Ocean Research Kiel, Am Kiel-Kanal 44, 24106 Kiel, Germany; (C.U.); (M.B.); (L.B.)
- Faculty of Mathematics and Natural Sciences, Kiel University, Christian-Albrechts-Platz 4, 24118 Kiel, Germany
- Correspondence: ; Tel.: +49-431-6004430
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15
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Van Cleemput E, Van Meerbeek K, Helsen K, Honnay O, Somers B. Remotely sensed plant traits can provide insights into ecosystem impacts of plant invasions: a case study covering two functionally different invaders. Biol Invasions 2020. [DOI: 10.1007/s10530-020-02338-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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16
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Sedio BE, Devaney JL, Pullen J, Parker GG, Wright SJ, Parker JD. Chemical novelty facilitates herbivore resistance and biological invasions in some introduced plant species. Ecol Evol 2020; 10:8770-8792. [PMID: 32884656 PMCID: PMC7452787 DOI: 10.1002/ece3.6575] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Revised: 06/11/2020] [Accepted: 06/22/2020] [Indexed: 11/30/2022] Open
Abstract
Ecological release from herbivory due to chemical novelty is commonly predicted to facilitate biological invasions by plants, but has not been tested on a community scale. We used metabolomics based on mass spectrometry molecular networks to assess the novelty of foliar secondary chemistry of 15 invasive plant species compared to 46 native species at a site in eastern North America. Locally, invasive species were more chemically distinctive than natives. Among the 15 invasive species, the more chemically distinct were less preferred by insect herbivores and less browsed by deer. Finally, an assessment of invasion frequency in 2,505 forest plots in the Atlantic coastal plain revealed that, regionally, invasive species that were less preferred by insect herbivores, less browsed by white-tailed deer, and chemically distinct relative to the native plant community occurred more frequently in survey plots. Our results suggest that chemically mediated release from herbivores contributes to many successful invasions.
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Affiliation(s)
- Brian E. Sedio
- Department of Integrative BiologyUniversity of Texas at AustinAustinTXUSA
- Smithsonian Tropical Research InstituteAncónRepublic of Panama
- Center for Biodiversity and Drug DiscoveryInstituto de Investigaciones Científicas y Servicios de Alta Tecnología‐AIPAncónRepublic of Panama
| | | | - Jamie Pullen
- Smithsonian Environmental Research CenterEdgewaterMDUSA
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17
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Metabolomic differences between invasive alien plants from native and invaded habitats. Sci Rep 2020; 10:9749. [PMID: 32546786 PMCID: PMC7297986 DOI: 10.1038/s41598-020-66477-w] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Accepted: 04/01/2020] [Indexed: 12/21/2022] Open
Abstract
Globalization facilitated the spread of invasive alien species (IAS), undermining the stability of the world's ecosystems. We investigated the metabolomic profiles of three IAS species: Chromolaena odorata (Asteraceae) Datura stramonium (Solanaceae), and Xanthium strumarium (Asteraceae), comparing metabolites of individual plants in their native habitats (USA), to their invasive counterparts growing in and around Kruger National Park (South Africa, ZA). Metabolomic samples were collected using RApid Metabolome Extraction and Storage (RAMES) technology, which immobilizes phytochemicals on glass fiber disks, reducing compound degradation, allowing long-term, storage and simplifying biochemical analysis. Metabolomic differences were analyzed using ultra-performance liquid chromatography-mass spectrometry (UPLC-MS) of samples eluted from RAMES disks. Partial Least Squares-Discriminant Analysis (PLS-DA) of metabolomes of individual plants allowed statistical separation of species, native and invasive populations of each species, and some populations on the same continent. Invasive populations of all species were more phytochemically diverse than their native counterparts, and their metabolomic profiles were statistically distinguishable from their native relatives. These data may elucidate the mechanisms of successful invasion and rapid adaptive evolution of IAS. Moreover, RAMES technology combined with PLS-DA statistical analysis may allow taxonomic identification of species and, possibly, populations within each species.
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18
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Grignon-Dubois M, De Montaudouin X, Rezzonico B. Flavonoid pattern inheritance in the allopolyploid Spartina anglica - Comparison with the parental species S. maritima and S. alterniflora. PHYTOCHEMISTRY 2020; 174:112312. [PMID: 32197152 DOI: 10.1016/j.phytochem.2020.112312] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2019] [Revised: 02/11/2020] [Accepted: 02/17/2020] [Indexed: 06/10/2023]
Abstract
The invasive species Spartina anglica arose in Europe by a cross between the Afro-European species S. maritima (native, paternal ancestor) and the introduced North American S. alterniflora (invasive, maternal ancestor). Aqueous methanolic extracts were prepared from plant tissue for chemotaxonomical comparison between the three species and determination of the phenolic pattern inheritance in S. anglica. A total of 20 phenolic compounds were detected in the aerial tissues of S. anglica and S. alterniflora, but only seven in S. maritima. They were isolated from their respective crude extracts, and their structures were determined according to spectroscopic data analysis and chemical evidence. They all belong to the flavonoid class, with 13 of them identified as C-glycoflavonoid and seven as O-glycoflavonoid. All these products were detected for the first time from S. anglica, fourteen of them for the first time from S. alterniflora, and three of them for the first time from S. maritima. The individual concentrations in the three species were determined by quantitative HPLC. The two parental species were found to differ markedly in their foliar phenolic fingerprint, whereas that of S. anglica showed a clear maternal dominance. Eight of the fourteen major compounds identified were of maternal origin among which, six were over-expressed, only three were from paternal origin but under-regulated, while two originated from the two parents. As far as we know, this work represents the first exhaustive report of the phenolic fingerprints of S. alterniflora and S. anglica and of the phenolic pattern inheritance in S. anglica. The similarity in the phenolic chemistry of the introduced and invasive S. alterniflora to its progeny could play a role in the physiological vigour and invasion success of S. anglica. This work provide a foundation for further studies, considering the reported biological activities of C-glycosidic flavonoids and tricin derivatives, and the lack of knowledge of the ecological chemistry of the genus Spartina.
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19
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Different "metabolomic niches" of the highly diverse tree species of the French Guiana rainforests. Sci Rep 2020; 10:6937. [PMID: 32332903 PMCID: PMC7181821 DOI: 10.1038/s41598-020-63891-y] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2019] [Accepted: 03/31/2020] [Indexed: 11/20/2022] Open
Abstract
Tropical rainforests harbor a particularly high plant diversity. We hypothesize that potential causes underlying this high diversity should be linked to distinct overall functionality (defense and growth allocation, anti-stress mechanisms, reproduction) among the different sympatric taxa. In this study we tested the hypothesis of the existence of a metabolomic niche related to a species-specific differential use and allocation of metabolites. We tested this hypothesis by comparing leaf metabolomic profiles of 54 species in two rainforests of French Guiana. Species identity explained most of the variation in the metabolome, with a species-specific metabolomic profile across dry and wet seasons. In addition to this “homeostatic” species-specific metabolomic profile significantly linked to phylogenetic distances, also part of the variance (flexibility) of the metabolomic profile was explained by season within a single species. Our results support the hypothesis of the high diversity in tropical forest being related to a species-specific metabolomic niche and highlight ecometabolomics as a tool to identify this species functional diversity related and consistent with the ecological niche theory.
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20
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Manrubia M, van der Putten WH, Weser C, ten Hooven FC, Martens H, Brinkman EP, Geisen S, Ramirez KS, Veen GF(C. Soil functional responses to drought under range-expanding and native plant communities. Funct Ecol 2019; 33:2402-2416. [PMID: 31894174 PMCID: PMC6919305 DOI: 10.1111/1365-2435.13453] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2018] [Revised: 08/23/2019] [Accepted: 09/01/2019] [Indexed: 11/30/2022]
Abstract
Current climate warming enables plant species and soil organisms to expand their range to higher latitudes and altitudes. At the same time, climate change increases the incidence of extreme weather events such as drought. While it is expected that plants and soil organisms originating from the south are better able to cope with drought, little is known about the consequences of their range shifts on soil functioning under drought events.Here, we test how range-expanding plant species and soil communities may influence soil functioning under drought. We performed a full-factorial outdoor mesocosm experiment with plant communities of range expanders or related natives, with soil inocula from the novel or the original range, with or without summer drought. We measured litter decomposition, carbon mineralization and enzyme activities, substrate-induced respiration and the relative abundance of soil saprophytic fungi immediately after drought and at 6 and 12 weeks after rewetting.Drought decreased all soil functions regardless of plant and soil origin except one; soil respiration was less reduced in soils of range-expanding plant communities, suggesting stronger resistance to drought. After rewetting, soil functioning responses depended on plant and soil origin. Soils of native plant communities with a history of drought had more litter mass loss and higher relative abundance of saprophytic fungi than soils without drought and soils of range expanders. Functions of soil from range expanders recovered in a more conservative manner than soils of natives, as litter mass loss did not exceed the control rates. At the end of the experiment, after rewetting, most soil functions in mesocosms with drought history did not differ anymore from the control.We conclude that functional consequences of range-expanding plants and soil biota may interact with effects of drought and that these effects are most prominent during the first weeks after rewetting of the soil. A free http://onlinelibrary.wiley.com/doi/10.1111/1365-2435.13453/suppinfo can be found within the Supporting Information of this article.
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Affiliation(s)
- Marta Manrubia
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
| | - Wim H. van der Putten
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
- Laboratory of NematologyWageningen UniversityWageningenThe Netherlands
| | - Carolin Weser
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
| | - Freddy C. ten Hooven
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
| | - Henk Martens
- Department of Soil QualityWageningen UniversityWageningenThe Netherlands
| | - E. Pernilla Brinkman
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
| | - Stefan Geisen
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
| | - Kelly S. Ramirez
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
| | - G. F. (Ciska) Veen
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
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21
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Schulz AN, Lucardi RD, Marsico TD. Successful Invasions and Failed Biocontrol: The Role of Antagonistic Species Interactions. Bioscience 2019. [DOI: 10.1093/biosci/biz075] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Abstract
Understanding the successes and failures of nonnative species remains challenging. In recent decades, researchers have developed the enemy release hypothesis and other antagonist hypotheses, which posit that nonnative species either fail or succeed in a novel range because of the presence or absence of antagonists. The premise of classical biological control of invasive species is that top-down control works. We identify twelve existing hypotheses that address the roles that antagonists from many trophic levels play during plant and insect invasions in natural environments. We outline a unifying framework of antagonist hypotheses to simplify the relatedness among the hypotheses, incorporate the role of top-down and bottom-up influences on nonnative species, and encourage expansion of experimental assessments of antagonist hypotheses to include belowground and fourth trophic level antagonists. A mechanistic understanding of antagonists and their impacts on nonnative species is critical in a changing world.
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Affiliation(s)
- Ashley N Schulz
- Department of Biological Sciences and the Environmental Science Program, Arkansas State University, Jonesboro, Arkansas
| | - Rima D Lucardi
- Insects, Diseases, and Invasive Plants Research Work Unit of the US Department of Agriculture Forest Service's Southern Research Station, located, Athens, Georgia, field office
| | - Travis D Marsico
- Department of Biological Sciences and the Environmental Science Program, Arkansas State University, Jonesboro, Arkansas
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22
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Peralta G, Schon NL, Dickie IA, St John MG, Orwin KH, Yeates GW, Peltzer DA. Contrasting responses of soil nematode communities to native and non-native woody plant expansion. Oecologia 2019; 190:891-899. [PMID: 31273519 DOI: 10.1007/s00442-019-04456-3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2019] [Accepted: 06/28/2019] [Indexed: 11/25/2022]
Abstract
Woody plant expansion into grasslands is widespread, driven by both successions to dominance by native woody species or invasion by non-native woody species. These shifts from grass- to woody-dominated systems also have profound effects on both above- and belowground communities and ecosystem processes. Woody-plant expansion should also alter the functional composition of the soil biota, including that of nematodes, which are major drivers of soil food-web structure and belowground processes, but such belowground impacts are poorly understood. We determined whether succession by a widespread native (Kunzea ericoides) and invasion by a non-native woody species (Pinus nigra) into tussock grasslands affect the composition of nematode functional guilds and the structure of nematode-based food webs. Although increasing dominance by woody species in both systems altered the functional guild composition of the nematode community, we found contrasting responses of nematode functional guilds to the different dominant plant species. Specifically, nematode communities reflected conditions of resource enrichment with increasing K. ericoides tree cover, whereas communities became structurally simplified and dominated by stress-tolerant nematode families with increasing P. nigra tree cover. Because nematodes regulate both bacterial- and fungal-dominated food webs in soils, these shifts could in turn alter multiple ecosystem processes belowground such as nutrient cycling. Incorporating species' functional traits into the assessment of habitat-change impacts on communities can greatly improve our understanding of species responses to environmental changes and their consequences in ecosystems.
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Affiliation(s)
- Guadalupe Peralta
- Manaaki Whenua Landcare Research, Lincoln, New Zealand. .,School of Biological Sciences, University of Canterbury, Christchurch, New Zealand.
| | | | - Ian A Dickie
- School of Biological Sciences, University of Canterbury, Christchurch, New Zealand.,Bio-Protection Research Centre, Lincoln, New Zealand
| | | | - Kate H Orwin
- Manaaki Whenua Landcare Research, Lincoln, New Zealand
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23
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Macel M, Visschers IGS, Peters JL, Kappers IF, de Vos RCH, van Dam NM. Metabolomics of Thrips Resistance in Pepper (Capsicum spp.) Reveals Monomer and Dimer Acyclic Diterpene Glycosides as Potential Chemical Defenses. J Chem Ecol 2019; 45:490-501. [PMID: 31175497 PMCID: PMC6570690 DOI: 10.1007/s10886-019-01074-4] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2019] [Revised: 05/09/2019] [Accepted: 05/13/2019] [Indexed: 12/16/2022]
Abstract
The development of pesticide resistance in insects and recent bans on pesticides call for the identification of natural sources of resistance in crops. Here, we used natural variation in pepper (Capsicum spp.) resistance combined with an untargeted metabolomics approach to detect secondary metabolites related to thrips (Frankliniella occidentalis) resistance. Using leaf disc choice assays, we tested 11 Capsicum accessions of C. annuum and C. chinense in both vegetative and flowering stages for thrips resistance. Metabolites in the leaves of these 11 accessions were analyzed using LC-MS based untargeted metabolomics. The choice assays showed significant differences among the accessions in thrips feeding damage. The level of resistance depended on plant developmental stage. Metabolomics analyses showed differences in metabolomes among the Capsicum species and plant developmental stages. Moreover, metabolomic profiles of resistant and susceptible accessions differed. Monomer and dimer acyclic diterpene glycosides (capsianosides) were pinpointed as metabolites that were related to thrips resistance. Sucrose and malonylated flavone glycosides were related to susceptibility. To our knowledge, this is the first time that dimer capsianosides of pepper have been linked to insect resistance. Our results show the potential of untargeted metabolomics as a tool for discovering metabolites that are important in plant - insect interactions.
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Affiliation(s)
- Mirka Macel
- Molecular Interaction Ecology, Institute of Water and Wetland Research (IWWR), Radboud University, P.O. Box 9010, 6500 GL, Nijmegen, The Netherlands.
| | - Isabella G S Visschers
- Molecular Interaction Ecology, Institute of Water and Wetland Research (IWWR), Radboud University, P.O. Box 9010, 6500 GL, Nijmegen, The Netherlands
| | - Janny L Peters
- Molecular Plant Physiology, Institute of Water and Wetland Research (IWWR), Radboud University, P. O. Box 9010, 6500 GL, Nijmegen, The Netherlands
| | - Iris F Kappers
- Laboratory of Plant Physiology, Wageningen University and Research, P.O. Box 658, 6700 AR, Wageningen, The Netherlands
| | - Ric C H de Vos
- Wageningen Plant Research, Bioscience, Wageningen University and Research, P.O. Box 16, 6700 AA, Wageningen, The Netherlands
| | - Nicole M van Dam
- Molecular Interaction Ecology, Institute of Water and Wetland Research (IWWR), Radboud University, P.O. Box 9010, 6500 GL, Nijmegen, The Netherlands
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103, Leipzig, Germany
- Institute of Biodiversity, Friedrich Schiller University Jena, Dornburger-Str. 159, 07743, Jena, Germany
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24
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Manrubia M, Snoek LB, Weser C, Veen GF, van der Putten WH. Belowground Consequences of Intracontinental Range-Expanding Plants and Related Natives in Novel Environments. Front Microbiol 2019; 10:505. [PMID: 30936858 PMCID: PMC6431654 DOI: 10.3389/fmicb.2019.00505] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Accepted: 02/27/2019] [Indexed: 11/17/2022] Open
Abstract
Introduced exotic plant species that originate from other continents are known to alter soil microbial community composition and nutrient cycling. Plant species that expand range to higher latitudes and altitudes as a consequence of current climate warming might as well affect the composition and functioning of native soil communities in their new range. However, the functional consequences of plant origin have been poorly studied in the case of plant range shifts. Here, we determined rhizosphere bacterial communities of four intracontinental range-expanding plant species in comparison with their four congeneric natives grown in soils collected from underneath those plant species in the field and in soils that are novel to them. We show that, when controlling for both species relatedness and soil characteristics, range-expanding plant species in higher latitude ecosystems will influence soil bacterial community composition and nutrient cycling in a manner similar to congeneric related native species. Our results highlight the importance to include phylogenetically controlled comparisons to disentangle the effect of origin from the effect of contrasting plant traits in the context of exotic plant species.
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Affiliation(s)
- Marta Manrubia
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands
| | - L. Basten Snoek
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands
- Laboratory of Nematology, Wageningen University and Research Centre, Wageningen, Netherlands
- Theoretical Biology and Bioinformatics, Utrecht University, Utrecht, Netherlands
| | - Carolin Weser
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands
| | - G. F. Veen
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands
| | - Wim H. van der Putten
- Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Wageningen, Netherlands
- Laboratory of Nematology, Wageningen University and Research Centre, Wageningen, Netherlands
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25
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Kulkarni P, Wilschut RA, Verhoeven KJF, van der Putten WH, Garbeva P. LAESI mass spectrometry imaging as a tool to differentiate the root metabolome of native and range-expanding plant species. PLANTA 2018; 248:1515-1523. [PMID: 30140978 PMCID: PMC6244666 DOI: 10.1007/s00425-018-2989-4] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/05/2018] [Accepted: 08/14/2018] [Indexed: 05/18/2023]
Abstract
LAESI-MSI, an innovative high-throughput technique holds a unique potential for untargeted detection, profiling and spatial localization of metabolites from intact plant samples without need for extraction or extensive sample preparation. Our understanding of chemical diversity in biological samples has greatly improved through recent advances in mass spectrometry (MS). MS-based-imaging (MSI) techniques have further enhanced this by providing spatial information on the distribution of metabolites and their relative abundance. This study aims to employ laser-ablation electrospray ionization (LAESI) MSI as a tool to profile and compare the root metabolome of two pairs of native and range-expanding plant species. It has been proposed that successful range-expanding plant species, like introduced exotic invaders, have a novel, or a more diverse secondary chemistry. Although some tests have been made using aboveground plant materials, tests using root materials are rare. We tested the hypothesis that range-expanding plants possess more diverse root chemistries than native plant species. To examine the root chemistry of the selected plant species, LAESI-MSI was performed in positive ion mode and data were acquired in a mass range of m/z 50-1200 with a spatial resolution of 100 µm. The acquired data were analyzed using in-house scripts, and differences in the spatial profiles were studied for discriminatory mass features. The results revealed clear differences in the metabolite profiles amongst and within both pairs of congeneric plant species, in the form of distinct metabolic fingerprints. The use of ambient conditions and the fact that no sample preparation was required, established LAESI-MSI as an ideal technique for untargeted metabolomics and for direct correlation of the acquired data to the underlying metabolomic complexity present in intact plant samples.
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Affiliation(s)
- Purva Kulkarni
- Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands.
| | - Rutger A Wilschut
- Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands
| | - Koen J F Verhoeven
- Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands
| | - Wim H van der Putten
- Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands
- Laboratory of Nematology, Wageningen University and Research Centre, PO Box 8123, 6700 ES, Wageningen, The Netherlands
| | - Paolina Garbeva
- Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands
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26
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Sedio BE, Parker JD, McMahon SM, Wright SJ. Comparative foliar metabolomics of a tropical and a temperate forest community. Ecology 2018; 99:2647-2653. [DOI: 10.1002/ecy.2533] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/24/2017] [Revised: 08/31/2018] [Accepted: 10/01/2018] [Indexed: 11/09/2022]
Affiliation(s)
- Brian E. Sedio
- Smithsonian Tropical Research Institute Apartado 0843–03092 Balboa Ancón Republic of Panama
- Center for Biodiversity and Drug Discovery Instituto de Investigaciones Científicas y Servicios de Alta Tecnología Apartado 0843‐01103 Ciudad del Saber Ancón Republic of Panama
| | - John D. Parker
- Smithsonian Environmental Research Center 647 Contees Wharf Road Edgewater Mary Land 21037 USA
| | - Sean M. McMahon
- Smithsonian Environmental Research Center 647 Contees Wharf Road Edgewater Mary Land 21037 USA
| | - S. Joseph Wright
- Smithsonian Tropical Research Institute Apartado 0843–03092 Balboa Ancón Republic of Panama
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27
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van Kleunen M, Bossdorf O, Dawson W. The Ecology and Evolution of Alien Plants. ANNUAL REVIEW OF ECOLOGY EVOLUTION AND SYSTEMATICS 2018. [DOI: 10.1146/annurev-ecolsys-110617-062654] [Citation(s) in RCA: 100] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
We review the state of the art of alien plant research with emphasis on conceptual advances and knowledge gains on general patterns and drivers, biotic interactions, and evolution. Major advances include the identification of different invasion stages and invasiveness dimensions (geographic range, habitat specificity, local abundance) and the identification of appropriate comparators while accounting for propagule pressure and year of introduction. Developments in phylogenetic and functional trait research bear great promise for better understanding of the underlying mechanisms. Global patterns are emerging with propagule pressure, disturbance, increased resource availability, and climate matching as major invasion drivers, but species characteristics also play a role. Biotic interactions with resident communities shape invasion outcomes, with major roles for species diversity, enemies, novel weapons, and mutualists. Mounting evidence has been found for rapid evolution of invasive aliens and evolutionary responses of natives, but a mechanistic understanding requires tighter integration of molecular and phenotypic approaches. We hope the open questions identified in this review will stimulate further research on the ecology and evolution of alien plants.
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Affiliation(s)
- Mark van Kleunen
- Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou 318000, China
- Ecology Group, Department of Biology, University of Konstanz, 78464 Konstanz, Germany
| | - Oliver Bossdorf
- Plant Evolutionary Ecology Group, Institute of Evolution and Ecology, University of Tübingen, 72076 Tübingen, Germany
| | - Wayne Dawson
- Department of Biosciences, Durham University, Durham DH1 3LE, United Kingdom
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Wilschut RA, Kostenko O, Koorem K, van der Putten WH. Nematode community responses to range-expanding and native plant communities in original and new range soils. Ecol Evol 2018; 8:10288-10297. [PMID: 30397466 PMCID: PMC6206179 DOI: 10.1002/ece3.4505] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2018] [Revised: 08/01/2018] [Accepted: 08/08/2018] [Indexed: 01/01/2023] Open
Abstract
Many plant species expand their range to higher latitudes in response to climate change. However, it is poorly understood how biotic interactions in the new range differ from interactions in the original range. Here, in a mesocosm experiment, we analyze nematode community responses in original and new range soils to plant communities with either (a) species native in both the original and new range, (b) range-expanding species related to these natives (related range expanders), or (c) range expanders without native congeneric species in the new range (unrelated range expanders). We hypothesized that nematode community shifts between ranges are strongest for unrelated range expanders and minimal for plant species that are native in both ranges. As a part of these community shifts, we hypothesized that range expanders, but not natives, would accumulate fewer root-feeding nematodes in their new range compared to their original range. Analyses of responses of nematodes from both original and new ranges and comparison between range expanders with and without close relatives have not been made before. Our study reveals that none of the plant communities experienced evident nematode community shifts between the original and new range. However, in soils from the new range, root-feeding nematode communities of natives and related range expanders were more similar than in soils from the original range, whereas the nematode community of unrelated range expanders was distinct from the communities of natives and related range expanders in soils from both ranges. The abundances of root-feeding nematodes were comparable between the original and new range for all plant communities. Unexpectedly, unrelated range expanders overall accumulated most root-feeding nematodes, whereas related range expanders accumulated fewest. We conclude that nematode communities associated with native and range-expanding plant species differ between the original and the new range, but that range-expanding plant species do not accumulate fewer root-feeding nematodes in their new than in their original range.
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Affiliation(s)
- Rutger A. Wilschut
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
- Laboratory of NematologyWageningen UniversityWageningenThe Netherlands
| | - Olga Kostenko
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
| | - Kadri Koorem
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
- Department of BotanyInstitute of Ecology and Earth SciencesUniversity of TartuTartuEstonia
| | - Wim H. van der Putten
- Department of Terrestrial EcologyNetherlands Institute of Ecology (NIOO‐KNAW)WageningenThe Netherlands
- Laboratory of NematologyWageningen UniversityWageningenThe Netherlands
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DiGiacopo DG, Meindl GA, Ryan S, Jaeger J, Wersebe M, Martin A, Robinson SA, Graham G, Palmer AR, Setteducate A, Murray I, Prior K, Hua J. Interaction between invasive plant leaf litter and NaCl on two model amphibians. Biol Invasions 2018. [DOI: 10.1007/s10530-018-1836-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Johnson SN, Hartley SE. Elevated carbon dioxide and warming impact silicon and phenolic-based defences differently in native and exotic grasses. GLOBAL CHANGE BIOLOGY 2018; 24:3886-3896. [PMID: 29105229 DOI: 10.1111/gcb.13971] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2017] [Accepted: 10/12/2017] [Indexed: 05/22/2023]
Abstract
Global climate change may increase invasions of exotic plant species by directly promoting the success of invasive/exotic species or by reducing the competitive abilities of native species. Changes in plant chemistry, leading to altered susceptibility to stress, could mediate these effects. Grasses are hyper-accumulators of silicon, which play a crucial function in the alleviation of diverse biotic and abiotic stresses. It is unknown how predicted increases in atmospheric carbon dioxide (CO2 ) and air temperature affect silicon accumulation in grasses, especially in relation to primary and secondary metabolites. We tested how elevated CO2 (eCO2 ) (+240 ppm) and temperature (eT) (+4°C) affected chemical composition (silicon, phenolics, carbon and nitrogen) and plant growth in eight grass species, either native or exotic to Australia. eCO2 increased phenolic concentrations by 11%, but caused silicon accumulation to decline by 12%. Moreover, declines in silicon occurred mainly in native species (-19%), but remained largely unchanged in exotic species. Conversely, eT increased silicon accumulation in native species (+19%) but decreased silicon accumulation in exotic species (-10%). Silicon and phenolic concentrations were negatively correlated with each other, potentially reflecting a defensive trade-off. Moreover, both defences were negatively correlated with plant mass, compatible with a growth-defence trade-off. Grasses responded in a species-specific manner, suggesting that the relative susceptibility of different species may differ under future climates compared to current species rankings of resource quality. For example, the native Microlaena stipoides was less well defended under eCO2 in terms of both phenolics and silicon, and thus could suffer greater vulnerability to herbivores. To our knowledge, this is the first demonstration of the impacts of eCO2 and eT on silicon accumulation in grasses. We speculate that the greater plasticity in silicon uptake shown by Australian native grasses may be partly a consequence of evolving in a low nutrient and seasonally arid environment.
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Affiliation(s)
- Scott N Johnson
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
| | - Susan E Hartley
- Department of Biology, York Environment and Sustainability Institute, University of York, York, UK
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Peters K, Worrich A, Weinhold A, Alka O, Balcke G, Birkemeyer C, Bruelheide H, Calf OW, Dietz S, Dührkop K, Gaquerel E, Heinig U, Kücklich M, Macel M, Müller C, Poeschl Y, Pohnert G, Ristok C, Rodríguez VM, Ruttkies C, Schuman M, Schweiger R, Shahaf N, Steinbeck C, Tortosa M, Treutler H, Ueberschaar N, Velasco P, Weiß BM, Widdig A, Neumann S, Dam NMV. Current Challenges in Plant Eco-Metabolomics. Int J Mol Sci 2018; 19:E1385. [PMID: 29734799 PMCID: PMC5983679 DOI: 10.3390/ijms19051385] [Citation(s) in RCA: 62] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2018] [Revised: 04/24/2018] [Accepted: 04/25/2018] [Indexed: 12/22/2022] Open
Abstract
The relatively new research discipline of Eco-Metabolomics is the application of metabolomics techniques to ecology with the aim to characterise biochemical interactions of organisms across different spatial and temporal scales. Metabolomics is an untargeted biochemical approach to measure many thousands of metabolites in different species, including plants and animals. Changes in metabolite concentrations can provide mechanistic evidence for biochemical processes that are relevant at ecological scales. These include physiological, phenotypic and morphological responses of plants and communities to environmental changes and also interactions with other organisms. Traditionally, research in biochemistry and ecology comes from two different directions and is performed at distinct spatiotemporal scales. Biochemical studies most often focus on intrinsic processes in individuals at physiological and cellular scales. Generally, they take a bottom-up approach scaling up cellular processes from spatiotemporally fine to coarser scales. Ecological studies usually focus on extrinsic processes acting upon organisms at population and community scales and typically study top-down and bottom-up processes in combination. Eco-Metabolomics is a transdisciplinary research discipline that links biochemistry and ecology and connects the distinct spatiotemporal scales. In this review, we focus on approaches to study chemical and biochemical interactions of plants at various ecological levels, mainly plant⁻organismal interactions, and discuss related examples from other domains. We present recent developments and highlight advancements in Eco-Metabolomics over the last decade from various angles. We further address the five key challenges: (1) complex experimental designs and large variation of metabolite profiles; (2) feature extraction; (3) metabolite identification; (4) statistical analyses; and (5) bioinformatics software tools and workflows. The presented solutions to these challenges will advance connecting the distinct spatiotemporal scales and bridging biochemistry and ecology.
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Affiliation(s)
- Kristian Peters
- Leibniz Institute of Plant Biochemistry, Stress and Developmental Biology, Weinberg 3, 06120 Halle (Saale), Germany.
| | - Anja Worrich
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.
- Institute of Biodiversity, Friedrich Schiller University Jena, Dornburger-Str. 159, 07743 Jena, Germany.
- UFZ-Helmholtz-Centre for Environmental Research, Department Environmental Microbiology, Permoserstraße 15, 04318 Leipzig, Germany.
| | - Alexander Weinhold
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.
- Institute of Biodiversity, Friedrich Schiller University Jena, Dornburger-Str. 159, 07743 Jena, Germany.
| | - Oliver Alka
- Applied Bioinformatics Group, Center for Bioinformatics, University of Tübingen, Sand 14, 72076 Tübingen, Germany.
| | - Gerd Balcke
- Leibniz Institute of Plant Biochemistry, Cell and Metabolic Biology, Weinberg 3, 06120 Halle (Saale), Germany.
| | - Claudia Birkemeyer
- Institute of Analytical Chemistry, University of Leipzig, Linnéstr. 3, 04103 Leipzig, Germany.
| | - Helge Bruelheide
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.
- Institute of Biology/Geobotany and Botanical Garden, Martin Luther University Halle-Wittenberg, Am Kirchtor 1, 06108 Halle (Saale), Germany.
| | - Onno W Calf
- Molecular Interaction Ecology, Institute for Water and Wetland Research (IWWR), Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Sophie Dietz
- Leibniz Institute of Plant Biochemistry, Stress and Developmental Biology, Weinberg 3, 06120 Halle (Saale), Germany.
| | - Kai Dührkop
- Department of Bioinformatics, Friedrich Schiller University Jena, Ernst-Abbe-Platz 2, 07743 Jena, Germany.
| | - Emmanuel Gaquerel
- Centre for Organismal Studies, Heidelberg University, Im Neuenheimer Feld 360, 69120 Heidelberg, Germany.
| | - Uwe Heinig
- Weizmann Institute of Science, Faculty of Biochemistry, Department of Plant Sciences, 234 Herzl St., P.O. Box 26, Rehovot 7610001, Israel.
| | - Marlen Kücklich
- Institute of Biology, University of Leipzig, Talstraße 33, 04109 Leipzig, Germany.
| | - Mirka Macel
- Molecular Interaction Ecology, Institute for Water and Wetland Research (IWWR), Radboud University, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands.
| | - Caroline Müller
- Chemical Ecology, Bielefeld University, Universitätsstr. 25, 33615 Bielefeld, Germany.
| | - Yvonne Poeschl
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.
- Institute of Informatics, Martin Luther University Halle-Wittenberg, Von-Seckendorff-Platz 1, 06120 Halle (Saale), Germany.
| | - Georg Pohnert
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Lessingstr. 8, 07743 Jena, Germany.
| | - Christian Ristok
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.
| | - Victor Manuel Rodríguez
- Group of Genetics, Breeding and Biochemistry of Brassica, Misión Biológica de Galicia (CSIC), Apartado 28, 36080 Pontevedra, Spain.
| | - Christoph Ruttkies
- Leibniz Institute of Plant Biochemistry, Stress and Developmental Biology, Weinberg 3, 06120 Halle (Saale), Germany.
| | - Meredith Schuman
- Department of Molecular Ecology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Straße 8, 07745 Jena, Germany.
| | - Rabea Schweiger
- Chemical Ecology, Bielefeld University, Universitätsstr. 25, 33615 Bielefeld, Germany.
| | - Nir Shahaf
- Weizmann Institute of Science, Faculty of Biochemistry, Department of Plant Sciences, 234 Herzl St., P.O. Box 26, Rehovot 7610001, Israel.
| | - Christoph Steinbeck
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Lessingstr. 8, 07743 Jena, Germany.
| | - Maria Tortosa
- Group of Genetics, Breeding and Biochemistry of Brassica, Misión Biológica de Galicia (CSIC), Apartado 28, 36080 Pontevedra, Spain.
| | - Hendrik Treutler
- Leibniz Institute of Plant Biochemistry, Stress and Developmental Biology, Weinberg 3, 06120 Halle (Saale), Germany.
| | - Nico Ueberschaar
- Institute of Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Lessingstr. 8, 07743 Jena, Germany.
| | - Pablo Velasco
- Group of Genetics, Breeding and Biochemistry of Brassica, Misión Biológica de Galicia (CSIC), Apartado 28, 36080 Pontevedra, Spain.
| | - Brigitte M Weiß
- Institute of Biology, University of Leipzig, Talstraße 33, 04109 Leipzig, Germany.
| | - Anja Widdig
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.
- Institute of Biology, University of Leipzig, Talstraße 33, 04109 Leipzig, Germany.
- Research Group of Primate Kin Selection, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, 04103 Leipzig, Germany.
| | - Steffen Neumann
- Leibniz Institute of Plant Biochemistry, Stress and Developmental Biology, Weinberg 3, 06120 Halle (Saale), Germany.
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.
| | - Nicole M van Dam
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany.
- Institute of Biodiversity, Friedrich Schiller University Jena, Dornburger-Str. 159, 07743 Jena, Germany.
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Koorem K, Kostenko O, Snoek LB, Weser C, Ramirez KS, Wilschut RA, van der Putten WH. Relatedness with plant species in native community influences ecological consequences of range expansions. OIKOS 2018. [DOI: 10.1111/oik.04817] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Affiliation(s)
- Kadri Koorem
- Dept of Terrestrial Ecology; Netherlands Inst. of Ecology (NIOO-KNAW); PO Box 50 NL-6700AB Wageningen the Netherlands
- Dept of Botany; Inst. of Ecology and Earth Sciences, Univ. of Tartu; Tartu Estonia
| | - Olga Kostenko
- Dept of Terrestrial Ecology; Netherlands Inst. of Ecology (NIOO-KNAW); PO Box 50 NL-6700AB Wageningen the Netherlands
| | - L. Basten Snoek
- Dept of Terrestrial Ecology; Netherlands Inst. of Ecology (NIOO-KNAW); PO Box 50 NL-6700AB Wageningen the Netherlands
- Laboratory of Nematology; Wageningen Univ.; Wageningen the Netherlands
| | - Carolin Weser
- Dept of Terrestrial Ecology; Netherlands Inst. of Ecology (NIOO-KNAW); PO Box 50 NL-6700AB Wageningen the Netherlands
| | - Kelly S. Ramirez
- Dept of Terrestrial Ecology; Netherlands Inst. of Ecology (NIOO-KNAW); PO Box 50 NL-6700AB Wageningen the Netherlands
| | - Rutger A. Wilschut
- Dept of Terrestrial Ecology; Netherlands Inst. of Ecology (NIOO-KNAW); PO Box 50 NL-6700AB Wageningen the Netherlands
- Laboratory of Nematology; Wageningen Univ.; Wageningen the Netherlands
| | - Wim H. van der Putten
- Dept of Terrestrial Ecology; Netherlands Inst. of Ecology (NIOO-KNAW); PO Box 50 NL-6700AB Wageningen the Netherlands
- Laboratory of Nematology; Wageningen Univ.; Wageningen the Netherlands
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Ronzhina DA. Distribution, competitive ability, and seed production of Bidens frondosa L. in the Middle Urals. RUSSIAN JOURNAL OF BIOLOGICAL INVASIONS 2017. [DOI: 10.1134/s2075111717040099] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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Schwartz N, Rohde S, Dobretsov S, Hiromori S, Schupp PJ. The role of chemical antifouling defence in the invasion success of Sargassum muticum: A comparison of native and invasive brown algae. PLoS One 2017; 12:e0189761. [PMID: 29267326 PMCID: PMC5739409 DOI: 10.1371/journal.pone.0189761] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2016] [Accepted: 12/03/2017] [Indexed: 12/12/2022] Open
Abstract
Competition and fouling defence are important traits that may facilitate invasions by non-indigenous species. The 'novel weapons hypothesis' (NWH) predicts that the invasive success of exotic species is closely linked to the possession of chemical defence compounds that the recipient community in the new range is not adapted to. In order to assess whether chemical defence traits contribute to invasion success, anti-bacterial, anti-quorum sensing, anti-diatom, anti-larval and anti-algal properties were investigated for the following algae: a) the invasive brown alga Sargassum muticum from both, its native (Japan) and invasive (Germany) range, b) the two non- or weak invasive species Sargassum fusiforme and Sargassum horneri from Japan, and c) Fucus vesiculosus, a native brown alga from Germany. Crude and surface extracts and lipid fractions of active extracts were tested against common fouling organisms and zygotes of a dominant competing brown alga. Extracts of the native brown alga F. vesiculosus inhibited more bacterial strains (75%) than any of the Sargassum spp. (17 to 29%). However, Sargassum spp. from Japan exhibited the strongest settlement inhibition against the diatom Cylindrotheca closterium, larvae of the bryozoan Bugula neritina and zygotes of the brown alga F. vesiculosus. Overall, extracts of S. muticum from the invasive range were less active compared to those of the native range suggesting an adaptation to lower fouling pressure and competition in the new range resulting in a shift of resource allocation from costly chemical defence to reproduction and growth. Non-invasive Sargassum spp. from Japan was equally defended against fouling and competitors like S. muticum from Japan indicating a necessity to include these species in European monitoring programs. The variable antifouling activity of surface and crude extracts highlights the importance to use both for an initial screening for antifouling activity.
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Affiliation(s)
- Nicole Schwartz
- Institute for Chemistry and Biology of the Marine Environment, Carl von Ossietzky University Oldenburg, Wilhelmshaven, Germany
| | - Sven Rohde
- Institute for Chemistry and Biology of the Marine Environment, Carl von Ossietzky University Oldenburg, Wilhelmshaven, Germany
| | - Sergey Dobretsov
- Department of Marine Science and Fisheries and Centre of Excellence in Marine Biotechnology, Sultan Qaboos University, Muscat, Oman
- Center of Excellence in Marine Biotechnology, Sultan Qaboos University, Muscat, Oman
| | - Shimabukuro Hiromori
- National Research Institute of Fisheries and Environment of Inland Sea, Fisheries Research Agency, Hatsukaichi City, Hiroshima Prefecture, Japan
| | - Peter J. Schupp
- Institute for Chemistry and Biology of the Marine Environment, Carl von Ossietzky University Oldenburg, Wilhelmshaven, Germany
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Wilschut RA, Silva JCP, Garbeva P, van der Putten WH. Belowground Plant-Herbivore Interactions Vary among Climate-Driven Range-Expanding Plant Species with Different Degrees of Novel Chemistry. FRONTIERS IN PLANT SCIENCE 2017; 8:1861. [PMID: 29118781 PMCID: PMC5660973 DOI: 10.3389/fpls.2017.01861] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2017] [Accepted: 10/11/2017] [Indexed: 05/06/2023]
Abstract
An increasing number of studies report plant range expansions to higher latitudes and altitudes in response to global warming. However, consequences for interactions with other species in the novel ranges are poorly understood. Here, we examine how range-expanding plant species interact with root-feeding nematodes from the new range. Root-feeding nematodes are ubiquitous belowground herbivores that may impact the structure and composition of natural vegetation. Because of their ecological novelty, we hypothesized that range-expanding plant species will be less suitable hosts for root-feeding nematodes than native congeneric plant species. In greenhouse and lab trials we compared nematode preference and performance of two root-feeding nematode species between range-expanding plant species and their congeneric natives. In order to understand differences in nematode preferences, we compared root volatile profiles of all range-expanders and congeneric natives. Nematode preferences and performances differed substantially among the pairs of range-expanders and natives. The range-expander that had the most unique volatile profile compared to its related native was unattractive and a poor host for nematodes. Other range-expanding plant species that differed less in root chemistry from native congeners, also differed less in nematode attraction and performance. We conclude that the three climate-driven range-expanding plant species studied varied considerably in their chemical novelty compared to their congeneric natives, and therefore affected native root-feeding nematodes in species-specific ways. Our data suggest that through variation in chemical novelty, range-expanding plant species may vary in their impacts on belowground herbivores in the new range.
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Affiliation(s)
- Rutger A. Wilschut
- Department of Terrestrial Ecology, Netherlands Institute of Ecology, Wageningen, Netherlands
- Laboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands
| | - Julio C. P. Silva
- Department of Terrestrial Ecology, Netherlands Institute of Ecology, Wageningen, Netherlands
| | - Paolina Garbeva
- Department of Microbial Ecology, Netherlands Institute of Ecology, Wageningen, Netherlands
| | - Wim H. van der Putten
- Department of Terrestrial Ecology, Netherlands Institute of Ecology, Wageningen, Netherlands
- Laboratory of Nematology, Wageningen University and Research, Wageningen, Netherlands
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Tamura M, Suseela V, Simpson M, Powell B, Tharayil N. Plant litter chemistry alters the content and composition of organic carbon associated with soil mineral and aggregate fractions in invaded ecosystems. GLOBAL CHANGE BIOLOGY 2017; 23:4002-4018. [PMID: 28480539 DOI: 10.1111/gcb.13751] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2016] [Revised: 03/08/2017] [Accepted: 03/10/2017] [Indexed: 06/07/2023]
Abstract
Through the input of disproportionate quantities of chemically distinct litter, invasive plants may potentially influence the fate of organic matter associated with soil mineral and aggregate fractions in some of the ecosystems they invade. Although context dependent, these native ecosystems subjected to prolonged invasion by exotic plants may be instrumental in distinguishing the role of plant-microbe-mineral interactions from the broader edaphic and climatic influences on the formation of soil organic matter (SOM). We hypothesized that the soils subjected to prolonged invasion by an exotic plant that input recalcitrant litter (Japanese knotweed, Polygonum cuspidatum) would have a greater proportion of plant-derived carbon (C) in the aggregate fractions, as compared with that in adjacent soil inhabited by native vegetation that input labile litter, whereas the soils under an invader that input labile litter (kudzu, Pueraria lobata) would have a greater proportion of microbial-derived C in the silt-clay fraction, as compared with that in adjacent soils that receive recalcitrant litter. At the knotweed site, the higher C content in soils under P. cuspidatum, compared with noninvaded soils inhabited by grasses and forbs, was limited to the macroaggregate fraction, which was abundant in plant biomarkers. The noninvaded soils at this site had a higher abundance of lignins in mineral and microaggregate fractions and suberin in the macroaggregate fraction, partly because of the greater root density of the native species, which might have had an overriding influence on the chemistry of the above-ground litter input. At the kudzu site, soils under P. lobata had lower C content across all size fractions at a 0-5 cm soil depth despite receiving similar amounts of Pinus litter. Contrary to our prediction, the noninvaded soils receiving recalcitrant Pinus litter had a similar abundance of plant biomarkers across both mineral and aggregate fractions, potentially because of the higher surface area of soil minerals at this site. The plant biomarkers were lower in the aggregate fractions of the P. lobata-invaded soils, compared with noninvaded pine stands, potentially suggesting a microbial co-metabolism of pine-derived compounds. These results highlight the complex interactions among litter chemistry, soil biota, and minerals in mediating soil C storage in unmanaged ecosystems; these interactions are particularly important under global changes that may alter plant species composition and hence the quantity and chemistry of litter inputs in terrestrial ecosystems.
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Affiliation(s)
- Mioko Tamura
- Department of Plant and Environmental Sciences, Clemson University, Clemson, SC, USA
| | - Vidya Suseela
- Department of Plant and Environmental Sciences, Clemson University, Clemson, SC, USA
| | - Myrna Simpson
- Department of Physical and Environmental Sciences, University of Toronto, Scarborough, Toronto, ON, Canada
| | - Brian Powell
- Department of Environmental Engineering and Earth Sciences, Clemson University, Clemson, SC, USA
| | - Nishanth Tharayil
- Department of Plant and Environmental Sciences, Clemson University, Clemson, SC, USA
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Grutters BMC, Saccomanno B, Gross EM, Van de Waal DB, van Donk E, Bakker ES. Growth strategy, phylogeny and stoichiometry determine the allelopathic potential of native and non-native plants. OIKOS 2017. [DOI: 10.1111/oik.03956] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
Affiliation(s)
- Bart M. C. Grutters
- Dept of Aquatic Ecology; Netherlands Inst. of Ecology (NIOO-KNAW), Droevendaalsesteeg 10; NL-6708 PB Wageningen the Netherlands
| | - Benedetta Saccomanno
- Dept of Aquatic Ecology; Netherlands Inst. of Ecology (NIOO-KNAW), Droevendaalsesteeg 10; NL-6708 PB Wageningen the Netherlands
| | - Elisabeth M. Gross
- Laboratoire Interdisciplinaire des Environnements Continentaux (LIEC), Univ. de Lorraine; Metz France
| | - Dedmer B. Van de Waal
- Dept of Aquatic Ecology; Netherlands Inst. of Ecology (NIOO-KNAW), Droevendaalsesteeg 10; NL-6708 PB Wageningen the Netherlands
| | - Ellen van Donk
- Dept of Aquatic Ecology; Netherlands Inst. of Ecology (NIOO-KNAW), Droevendaalsesteeg 10; NL-6708 PB Wageningen the Netherlands
- Dept of Ecology and Biodiversity; Utrecht Univ.; Utrecht the Netherlands
| | - Elisabeth S. Bakker
- Dept of Aquatic Ecology; Netherlands Inst. of Ecology (NIOO-KNAW), Droevendaalsesteeg 10; NL-6708 PB Wageningen the Netherlands
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Erickson DL, Reed E, Ramachandran P, Bourg NA, McShea WJ, Ottesen A. Reconstructing a herbivore's diet using a novel rbcL DNA mini-barcode for plants. AOB PLANTS 2017; 9:plx015. [PMID: 28533898 PMCID: PMC5434754 DOI: 10.1093/aobpla/plx015] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2016] [Revised: 03/28/2017] [Accepted: 04/13/2017] [Indexed: 05/05/2023]
Abstract
Next Generation Sequencing and the application of metagenomic analyses can be used to answer questions about animal diet choice and study the consequences of selective foraging by herbivores. The quantification of herbivore diet choice with respect to native versus exotic plant species is particularly relevant given concerns of invasive species establishment and their effects on ecosystems. While increased abundance of white-tailed deer (Odocoileus virginianus) appears to correlate with increased incidence of invasive plant species, data supporting a causal link is scarce. We used a metabarcoding approach (PCR amplicons of the plant rbcL gene) to survey the diet of white-tailed deer (fecal samples), from a forested site in Warren County, Virginia with a comprehensive plant species inventory and corresponding reference collection of plant barcode and chloroplast sequences. We sampled fecal pellet piles and extracted DNA from 12 individual deer in October 2014. These samples were compared to a reference DNA library of plant species collected within the study area. For 72 % of the amplicons, we were able to assign taxonomy at the species level, which provides for the first time-sufficient taxonomic resolution to quantify the relative frequency at which native and exotic plant species are being consumed by white-tailed deer. For each of the 12 individual deer we collected three subsamples from the same fecal sample, resulting in sequencing 36 total samples. Using Qiime, we quantified the plant DNA found in all 36 samples, and found that variance within samples was less than variance between samples (F = 1.73, P = 0.004), indicating additional subsamples may not be necessary. Species level diversity ranged from 60 to 93 OTUs per individual and nearly 70 % of all plant sequences recovered were from native plant species. The number of species detected did reduce significantly (range 4-12) when we excluded species whose OTU composed <1 % of each sample's total. When compared to the abundance of native and non-natives plants inventoried in the local community, our results support the observation that white-tailed deer have strong foraging preferences, but these preferences were not consistent for species in either class. Deer forage behaviour may favour some exotic species, but not all.
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Affiliation(s)
- David L. Erickson
- Molecular Methods and Subtyping Branch, Division of Microbiology, Centre for Food Safety and Applied Nutrition (CFSAN), FDA, 5001 Campus Drive, College Park, ML 20740, USA
| | - Elizabeth Reed
- Molecular Methods and Subtyping Branch, Division of Microbiology, Centre for Food Safety and Applied Nutrition (CFSAN), FDA, 5001 Campus Drive, College Park, ML 20740, USA
| | - Padmini Ramachandran
- Molecular Methods and Subtyping Branch, Division of Microbiology, Centre for Food Safety and Applied Nutrition (CFSAN), FDA, 5001 Campus Drive, College Park, ML 20740, USA
| | - Norman A. Bourg
- U.S. Geological Survey, National Research Program - Eastern Branch, 12201 Sunrise Valley Drive, MS 430, Reston, VA 20192, USA
| | - William J. McShea
- Smithsonian Conservation Biology Institute, National Zoological Park, 1500 Remount Road, Front Royal, VA 22630, USA
| | - Andrea Ottesen
- Molecular Methods and Subtyping Branch, Division of Microbiology, Centre for Food Safety and Applied Nutrition (CFSAN), FDA, 5001 Campus Drive, College Park, ML 20740, USA
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Abstract
Plant-herbivore interactions shape community dynamics across marine, freshwater, and terrestrial habitats. From amphipods to elephants and from algae to trees, plant-herbivore relationships are the crucial link generating animal biomass (and human societies) from mere sunlight. These interactions are, thus, pivotal to understanding the ecology and evolution of virtually any ecosystem. Here, we briefly highlight recent advances in four areas of plant-herbivore interactions: (1) plant defense theory, (2) herbivore diversity and ecosystem function, (3) predation risk aversion and herbivory, and (4) how a changing climate impacts plant-herbivore interactions. Recent advances in plant defense theory, for example, highlight how plant life history and defense traits affect and are affected by multiple drivers, including enemy pressure, resource availability, and the local plant neighborhood, resulting in trait-mediated feedback loops linking trophic interactions with ecosystem nutrient dynamics. Similarly, although the positive effect of consumer diversity on ecosystem function has long been recognized, recent advances using DNA barcoding to elucidate diet, and Global Positioning System/remote sensing to determine habitat selection and impact, have shown that herbivore communities are probably even more functionally diverse than currently realized. Moreover, although most diversity-function studies continue to emphasize plant diversity, herbivore diversity may have even stronger impacts on ecosystem multifunctionality. Recent studies also highlight the role of risk in plant-herbivore interactions, and risk-driven trophic cascades have emerged as landscape-scale patterns in a variety of ecosystems. Perhaps not surprisingly, many plant-herbivore interactions are currently being altered by climate change, which affects plant growth rates and resource allocation, expression of chemical defenses, plant phenology, and herbivore metabolism and behavior. Finally, we conclude by noting that although the field is advancing rapidly, the world is changing even more rapidly, challenging our ability to manage these pivotal links in the food chain.
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Affiliation(s)
- Deron E. Burkepile
- Department of Ecology, Evolution, and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, USA
- Marine Science Institute, University of California Santa Barbara, Santa Barbara, CA, USA
| | - John D. Parker
- Smithsonian Environmental Research Center, Edgewater, MD, USA
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Differences in interactions of aboveground and belowground herbivores on the invasive plant Alternanthera philoxeroides and native host A. sessilis. Biol Invasions 2016. [DOI: 10.1007/s10530-016-1234-y] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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41
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Schuman MC, van Dam NM, Beran F, Harpole WS. How does plant chemical diversity contribute to biodiversity at higher trophic levels? CURRENT OPINION IN INSECT SCIENCE 2016; 14:46-55. [PMID: 27436646 DOI: 10.1016/j.cois.2016.01.003] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2015] [Revised: 01/18/2016] [Accepted: 01/19/2016] [Indexed: 06/06/2023]
Abstract
Plants, perhaps Earth's most accomplished chemists, produce thousands of specialized metabolites having no direct role in cell division or growth. These phytochemicals vary by taxon, with many taxa producing characteristic substance classes; and within taxa, with individual variation in structural variety and production patterns. Observations of corresponding variation in herbivore metabolism, behavior, and diet breadth motivated the development of chemical ecology research. We discuss the importance of plant biodiversity in general and phytochemical diversity in particular for biodiversity and ecological interactions at higher trophic levels. We then provide an overview of the descriptive, molecular and analytical tools which allow modern biologists to investigate phytochemical diversity and its effects on higher trophic levels, from physiological mechanisms to ecological communities.
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Affiliation(s)
- Meredith C Schuman
- Department of Molecular Ecology, Max Planck Institute for Chemical Ecology, Hans-Knöll-Straße 8, 07745 Jena, Germany; German Centre for Integrative Biodiversity Research (iDiv), Deutscher Platz 5e, 04103 Leipzig, Germany.
| | - Nicole M van Dam
- German Centre for Integrative Biodiversity Research (iDiv), Deutscher Platz 5e, 04103 Leipzig, Germany; Friedrich Schiller University Jena, Institute for Ecology, Jena, Germany; Molecular Interaction Ecology, Institute of Water and Wetland Research (IWWR), Radboud University, PO Box 9010, 6500 GL Nijmegen, The Netherlands
| | - Franziska Beran
- Research Group Sequestration and Detoxification in Insects, Max Planck Institute for Chemical Ecology, Hans-Knöll-Straße 8, 07745 Jena, Germany
| | - W Stanley Harpole
- German Centre for Integrative Biodiversity Research (iDiv), Deutscher Platz 5e, 04103 Leipzig, Germany; The Helmholtz Centre for Environmental Research (UFZ), Permoserstraße 15, 04318 Leipzig, Germany; Martin Luther University Halle-Wittenberg, Universitätsplatz 10, 06108 Halle, Germany
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Engelkes T, Meisner A, Morriën E, Kostenko O, Van der Putten WH, Macel M. Herbivory and dominance shifts among exotic and congeneric native plant species during plant community establishment. Oecologia 2016; 180:507-17. [PMID: 26481795 PMCID: PMC4723625 DOI: 10.1007/s00442-015-3472-6] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2015] [Accepted: 09/30/2015] [Indexed: 11/21/2022]
Abstract
Invasive exotic plant species often have fewer natural enemies and suffer less damage from herbivores in their new range than genetically or functionally related species that are native to that area. Although we might expect that having fewer enemies would promote the invasiveness of the introduced exotic plant species due to reduced enemy exposure, few studies have actually analyzed the ecological consequences of this situation in the field. Here, we examined how exposure to aboveground herbivores influences shifts in dominance among exotic and phylogenetically related native plant species in a riparian ecosystem during early establishment of invaded communities. We planted ten plant communities each consisting of three individuals of each of six exotic plant species as well as six phylogenetically related natives. Exotic plant species were selected based on a rapid recent increase in regional abundance, the presence of a congeneric native species, and their co-occurrence in the riparian ecosystem. All plant communities were covered by tents with insect mesh. Five tents were open on the leeward side to allow herbivory. The other five tents were completely closed in order to exclude insects and vertebrates. Herbivory reduced aboveground biomass by half and influenced which of the plant species dominated the establishing communities. Exposure to herbivory did not reduce the total biomass of natives more than that of exotics, so aboveground herbivory did not selectively enhance exotics during this early stage of plant community development. Effects of herbivores on plant biomass depended on plant species or genus but not on plant status (i.e., exotic vs native). Thus, aboveground herbivory did not promote the dominance of exotic plant species during early establishment of the phylogenetically balanced plant communities.
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Affiliation(s)
- Tim Engelkes
- />Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB Wageningen, The Netherlands
| | - Annelein Meisner
- />Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB Wageningen, The Netherlands
- />Microbial Ecology Group, Department of Biology, Lund University, Ecology Building, 223 62 Lund, Sweden
- />Sections of Microbiology and Terrestrial Ecology, Department of Biology & Center for Macroecology, Evolution, and Climate, The Natural History Museum of Denmark, University of Copenhagen, Universitetsparken 15, 2100 København Ø, Denmark
| | - Elly Morriën
- />Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB Wageningen, The Netherlands
| | - Olga Kostenko
- />Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB Wageningen, The Netherlands
| | - Wim H. Van der Putten
- />Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB Wageningen, The Netherlands
- />Laboratory of Nematology, Wageningen University and Research Centre, P.O. Box 8123, 6700 ES Wageningen, The Netherlands
| | - Mirka Macel
- />Department of Terrestrial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB Wageningen, The Netherlands
- />Department of Plant Ecology, University of Tuebingen, Auf der Morgenstelle 5, 72076 Tuebingen, Germany
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Suseela V, Alpert P, Nakatsu CH, Armstrong A, Tharayil N. Plant–soil interactions regulate the identity of soil carbon in invaded ecosystems: implication for legacy effects. Funct Ecol 2015. [DOI: 10.1111/1365-2435.12591] [Citation(s) in RCA: 41] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Affiliation(s)
- Vidya Suseela
- Department of Agricultural and Environmental Sciences Clemson University Clemson South Carolina29634 USA
| | - Peter Alpert
- Biology Department University of Massachusetts Amherst Massachusetts01003 USA
| | - Cindy H. Nakatsu
- Department of Agronomy Purdue University West Lafayette Indiana47907 USA
| | - Arthur Armstrong
- Department of Agronomy Purdue University West Lafayette Indiana47907 USA
| | - Nishanth Tharayil
- Department of Agricultural and Environmental Sciences Clemson University Clemson South Carolina29634 USA
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Comparative Herbivory Rates and Secondary Metabolite Profiles in the Leaves of Native and Non-Native Lonicera Species. J Chem Ecol 2015; 41:1069-79. [DOI: 10.1007/s10886-015-0648-9] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2015] [Revised: 09/14/2015] [Accepted: 11/03/2015] [Indexed: 10/22/2022]
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45
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Tsogtbaatar E, Cocuron JC, Sonera MC, Alonso AP. Metabolite fingerprinting of pennycress (Thlaspi arvense L.) embryos to assess active pathways during oil synthesis. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:4267-77. [PMID: 25711705 PMCID: PMC4493779 DOI: 10.1093/jxb/erv020] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
Pennycress (Thlaspi arvense L.), a plant naturalized to North America, accumulates high levels of erucic acid in its seeds, which makes it a promising biodiesel and industrial crop. The main carbon sinks in pennycress embryos were found to be proteins, fatty acids, and cell wall, which respectively represented 38.5, 33.2, and 27.0% of the biomass at 21 days after pollination. Erucic acid reached a maximum of 36% of the total fatty acids. Together these results indicate that total oil and erucic acid contents could be increased to boost the economic competitiveness of this crop. Understanding the biochemical basis of oil synthesis in pennycress embryos is therefore timely and relevant to guide future breeding and/or metabolic engineering efforts. For this purpose, a combination of metabolomics approaches was conducted to assess the active biochemical pathways during oil synthesis. First, gas chromatography-mass spectrometry (GC-MS) profiling of intracellular metabolites highlighted three main families of compounds: organic acids, amino acids, and sugars/sugar alcohols. Secondly, these intermediates were quantified in developing pennycress embryos by liquid chromatography-tandem mass spectrometry (LC-MS/MS) in multiple reaction monitoring mode. Finally, partitional clustering analysis grouped the intracellular metabolites that shared a similar pattern of accumulation over time into eight clusters. This study underlined that: (i) sucrose might be stored rather than cleaved into hexoses; (ii) glucose and glutamine would be the main sources of carbon and nitrogen, respectively; and (iii) glycolysis, the oxidative pentose phosphate pathway, the tricarboxylic acid cycle, and the Calvin cycle were active in developing pennycress embryos.
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Affiliation(s)
- Enkhtuul Tsogtbaatar
- The Ohio State University, Department of Molecular Genetics, Columbus, OH 43210, USA
| | - Jean-Christophe Cocuron
- The Ohio State University, Department of Molecular Genetics, Columbus, OH 43210, USA The Ohio State University, Center for Applied Plant Sciences, Columbus, OH 43210, USA
| | - Marcos Corchado Sonera
- University of Puerto Rico, Mechanical Engineering Department, Mayagüez, 00681-9000, Puerto Rico
| | - Ana Paula Alonso
- The Ohio State University, Department of Molecular Genetics, Columbus, OH 43210, USA
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