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For: Vaiana SM, Palma-Vittorelli MB, Palma MU. Time scale of protein aggregation dictated by liquid-liquid demixing. Proteins 2003;51:147-53. [PMID: 12596271 DOI: 10.1002/prot.10306] [Citation(s) in RCA: 32] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Number Cited by Other Article(s)
1
De Luca G, Sancataldo G, Militello B, Vetri V. Surface-catalyzed liquid-liquid phase separation and amyloid-like assembly in microscale compartments. J Colloid Interface Sci 2024;676:569-581. [PMID: 39053405 DOI: 10.1016/j.jcis.2024.07.135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Revised: 06/24/2024] [Accepted: 07/16/2024] [Indexed: 07/27/2024]
2
Randomizing of Oligopeptide Conformations by Nearest Neighbor Interactions between Amino Acid Residues. Biomolecules 2022;12:biom12050684. [PMID: 35625612 PMCID: PMC9138747 DOI: 10.3390/biom12050684] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2022] [Revised: 04/29/2022] [Accepted: 05/01/2022] [Indexed: 02/04/2023]  Open
3
Fennema Galparsoro D, Zhou X, Jaaloul A, Piccirilli F, Vetri V, Foderà V. Conformational Transitions upon Maturation Rule Surface and pH-Responsiveness of α-Lactalbumin Microparticulates. ACS APPLIED BIO MATERIALS 2021;4:1876-1887. [PMID: 35014457 DOI: 10.1021/acsabm.0c01541] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
4
Ahanger I, Parray ZA, Nasreen K, Ahmad F, Hassan MI, Islam A, Sharma A. Heparin Accelerates the Protein Aggregation via the Downhill Polymerization Mechanism: Multi-Spectroscopic Studies to Delineate the Implications on Proteinopathies. ACS OMEGA 2021;6:2328-2339. [PMID: 33521471 PMCID: PMC7841943 DOI: 10.1021/acsomega.0c05638] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/19/2020] [Accepted: 01/04/2021] [Indexed: 06/12/2023]
5
Gobbo D, Ballone P, Garabato BD. Coarse-Grained Model of Entropy-Driven Demixing. J Phys Chem B 2020;124:9267-9274. [DOI: 10.1021/acs.jpcb.0c07575] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
6
Hasecke F, Miti T, Perez C, Barton J, Schölzel D, Gremer L, Grüning CSR, Matthews G, Meisl G, Knowles TPJ, Willbold D, Neudecker P, Heise H, Ullah G, Hoyer W, Muschol M. Origin of metastable oligomers and their effects on amyloid fibril self-assembly. Chem Sci 2018;9:5937-5948. [PMID: 30079208 PMCID: PMC6050532 DOI: 10.1039/c8sc01479e] [Citation(s) in RCA: 70] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2018] [Accepted: 06/12/2018] [Indexed: 01/05/2023]  Open
7
The route to protein aggregate superstructures: Particulates and amyloid-like spherulites. FEBS Lett 2015;589:2448-63. [DOI: 10.1016/j.febslet.2015.07.006] [Citation(s) in RCA: 55] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2015] [Revised: 07/02/2015] [Accepted: 07/06/2015] [Indexed: 12/15/2022]
8
Wedekind J, Xu L, Buldyrev SV, Stanley HE, Reguera D, Franzese G. Optimization of crystal nucleation close to a metastable fluid-fluid phase transition. Sci Rep 2015;5:11260. [PMID: 26095898 PMCID: PMC4476038 DOI: 10.1038/srep11260] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2015] [Accepted: 04/09/2015] [Indexed: 11/15/2022]  Open
9
Jimenez-Angeles F, Firoozabadi A. Enhanced Hydrate Nucleation Near the Limit of Stability. J Phys Chem A 2015. [DOI: 10.1021/acs.jpca.5b01869] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
10
Jimenez-Angeles F, Firoozabadi A. Enhanced Hydrate Nucleation Near the Limit of Stability. THE JOURNAL OF PHYSICAL CHEMISTRY. C, NANOMATERIALS AND INTERFACES 2015;119:8798-8804. [PMID: 25822221 DOI: 10.1021/acs.jpcc.5b01869] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
11
D’Agostino T, Solana JR, Emanuele A. Prediction of thermodynamic instabilities of protein solutions from simple protein–protein interactions. Chem Phys 2013. [DOI: 10.1016/j.chemphys.2013.01.041] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
12
Foley J, Hill SE, Miti T, Mulaj M, Ciesla M, Robeel R, Persichilli C, Raynes R, Westerheide S, Muschol M. Structural fingerprints and their evolution during oligomeric vs. oligomer-free amyloid fibril growth. J Chem Phys 2013;139:121901. [PMID: 24089713 PMCID: PMC3716784 DOI: 10.1063/1.4811343] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2013] [Accepted: 05/03/2013] [Indexed: 11/14/2022]  Open
13
Xu L, Buldyrev SV, Stanley HE, Franzese G. Homogeneous crystal nucleation near a metastable fluid-fluid phase transition. PHYSICAL REVIEW LETTERS 2012;109:095702. [PMID: 23002854 DOI: 10.1103/physrevlett.109.095702] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2012] [Indexed: 06/01/2023]
14
Vetri V, D’Amico M, Foderà V, Leone M, Ponzoni A, Sberveglieri G, Militello V. Bovine Serum Albumin protofibril-like aggregates formation: Solo but not simple mechanism. Arch Biochem Biophys 2011;508:13-24. [DOI: 10.1016/j.abb.2011.01.024] [Citation(s) in RCA: 76] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2010] [Revised: 01/31/2011] [Accepted: 01/31/2011] [Indexed: 11/29/2022]
15
Concanavalin A aggregation and toxicity on cell cultures. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 2010;1804:173-83. [DOI: 10.1016/j.bbapap.2009.09.013] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2009] [Revised: 09/03/2009] [Accepted: 09/13/2009] [Indexed: 11/23/2022]
16
Shen VK, Cheung JK, Errington JR, Truskett TM. Insights Into Crowding Effects on Protein Stability From a Coarse-Grained Model. J Biomech Eng 2009;131:071002. [DOI: 10.1115/1.3127259] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
17
Pullara F, Emanuele A. Early stages of beta2-microglobulin aggregation and the inhibiting action of alphaB-crystallin. Proteins 2008;73:1037-46. [PMID: 18543331 DOI: 10.1002/prot.22122] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
18
Pullara F, Emanuele A, Palma-Vittorelli MB, Palma MU. Protein crystallization: universal thermodynamic vs. specific effects of PEG. Faraday Discuss 2008;139:299-308; discussion 309-25, 419-20. [DOI: 10.1039/b717404g] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
19
Sedgwick H, Cameron JE, Poon WCK, Egelhaaf SU. Protein phase behavior and crystallization: Effect of glycerol. J Chem Phys 2007;127:125102. [PMID: 17902938 DOI: 10.1063/1.2771168] [Citation(s) in RCA: 34] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]  Open
20
Pullara F, Emanuele A, Palma-Vittorelli MB, Palma MU. Protein aggregation/crystallization and minor structural changes: universal versus specific aspects. Biophys J 2007;93:3271-8. [PMID: 17660322 PMCID: PMC2025655 DOI: 10.1529/biophysj.107.110577] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
21
Librizzi F, Foderà V, Vetri V, Lo Presti C, Leone M. Effects of confinement on insulin amyloid fibrils formation. EUROPEAN BIOPHYSICS JOURNAL: EBJ 2007;36:711-5. [PMID: 17340097 DOI: 10.1007/s00249-007-0137-3] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2006] [Revised: 01/15/2007] [Accepted: 01/17/2007] [Indexed: 10/23/2022]
22
Vaiana SM, Rotter MA, Emanuele A, Ferrone FA, Palma-Vittorelli MB. Effect of T-R conformational change on sickle-cell hemoglobin interactions and aggregation. Proteins 2006;58:426-38. [PMID: 15573374 DOI: 10.1002/prot.20339] [Citation(s) in RCA: 14] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
23
Shen VK, Cheung JK, Errington JR, Truskett TM. Coarse-grained strategy for modeling protein stability in concentrated solutions. II: phase behavior. Biophys J 2006;90:1949-60. [PMID: 16387768 PMCID: PMC1386775 DOI: 10.1529/biophysj.105.076497] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/20/2005] [Accepted: 12/08/2005] [Indexed: 11/18/2022]  Open
24
Lindberg MJ, Byström R, Boknäs N, Andersen PM, Oliveberg M. Systematically perturbed folding patterns of amyotrophic lateral sclerosis (ALS)-associated SOD1 mutants. Proc Natl Acad Sci U S A 2005;102:9754-9. [PMID: 15987780 PMCID: PMC1174986 DOI: 10.1073/pnas.0501957102] [Citation(s) in RCA: 188] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2005] [Indexed: 11/18/2022]  Open
25
Otzen DE, Oliveberg M. Transient formation of nano-crystalline structures during fibrillation of an Abeta-like peptide. Protein Sci 2004;13:1417-21. [PMID: 15096642 PMCID: PMC2286749 DOI: 10.1110/ps.03538904] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
26
Christoph GW, Hofrichter J, Eaton WA. Understanding the shape of sickled red cells. Biophys J 2004;88:1371-6. [PMID: 15542552 PMCID: PMC1305139 DOI: 10.1529/biophysj.104.051250] [Citation(s) in RCA: 63] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]  Open
27
Chen Q, Vekilov PG, Nagel RL, Hirsch RE. Liquid-liquid phase separation in hemoglobins: distinct aggregation mechanisms of the beta6 mutants. Biophys J 2004;86:1702-12. [PMID: 14990498 PMCID: PMC1304006 DOI: 10.1016/s0006-3495(04)74239-3] [Citation(s) in RCA: 49] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]  Open
28
Chen K, Ballas SK, Hantgan RR, Kim-Shapiro DB. Aggregation of normal and sickle hemoglobin in high concentration phosphate buffer. Biophys J 2004;87:4113-21. [PMID: 15465861 PMCID: PMC1304920 DOI: 10.1529/biophysj.104.046482] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
29
Vaiana SM, Emanuele A, Palma-Vittorelli MB, Palma MU. Irreversible formation of intermediate BSA oligomers requires and induces conformational changes. Proteins 2004;55:1053-62. [PMID: 15146502 DOI: 10.1002/prot.20074] [Citation(s) in RCA: 37] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
30
Manno M, Xiao C, Bulone D, Martorana V, San Biagio PL. Thermodynamic instability in supersaturated lysozyme solutions: effect of salt and role of concentration fluctuations. PHYSICAL REVIEW E 2003;68:011904. [PMID: 12935173 DOI: 10.1103/physreve.68.011904] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2003] [Indexed: 11/07/2022]
31
Moelbert S, De Los Rios P. Hydrophobic Interaction Model for Upper and Lower Critical Solution Temperatures. Macromolecules 2003. [DOI: 10.1021/ma025890c] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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