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Gutierrez E, Mitchell S, Hambly C, Sayle KL, von Kriegsheim A, Speakman JR, Britton K. Carbon, nitrogen, and sulfur elemental and isotopic variations in mouse hair and bone collagen during short-term graded calorie restriction. iScience 2024; 27:110059. [PMID: 38947513 PMCID: PMC11214416 DOI: 10.1016/j.isci.2024.110059] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Revised: 03/19/2024] [Accepted: 05/17/2024] [Indexed: 07/02/2024] Open
Abstract
This study characterized the effect of calorie restriction (CR) on elemental content and stable isotope ratio measurements of bone "collagen" and hair keratin. Adult mice on graded CR (10-40%; 84 days) showed decreased hair δ 15N, δ 13C, and δ 34S values (significantly for δ 15N) with increasing CR, alongside a significant increase in bone "collagen" δ 15N values and a decrease in "collagen" δ 13C values. We propose this was likely due to the intensified mobilization of endogenous proteins, as well as lipids in newly synthesized "collagen". Elemental analysis of bone "collagen" revealed decreased carbon, nitrogen, and sulfur % content with increasing CR which is attributed to a change in the in vivo bone "collagen" structure with extent of CR. This complexity challenges the use of elemental indicators in the assessment of collagen quality in archaeological studies where nutritional stress may be a factor.
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Affiliation(s)
- Eléa Gutierrez
- Department of Archaeology, University of Aberdeen, Aberdeen, Scotland AB39 2PN, UK
- School of Biological Sciences, University of Aberdeen, Aberdeen, Scotland AB24 2TZ, UK
- AASPE “Archéozoologie, Archéobotanique: Sociétés, Pratiques, Environnements”, Muséum national d’Histoire naturelle, 75005 Paris, France
| | - Sharon Mitchell
- School of Biological Sciences, University of Aberdeen, Aberdeen, Scotland AB24 2TZ, UK
| | - Catherine Hambly
- School of Biological Sciences, University of Aberdeen, Aberdeen, Scotland AB24 2TZ, UK
| | - Kerry L. Sayle
- Scottish Universities Environmental Research Centre, University of Glasgow, Scotland G75 0QF, UK
| | - Alex von Kriegsheim
- Edinburgh Cancer Research UK Centre, MRC Institute of Genetics and Molecular Medicine, University of Edinburgh, Edinburgh Scotland EH4 2XR, UK
| | - John R. Speakman
- School of Biological Sciences, University of Aberdeen, Aberdeen, Scotland AB24 2TZ, UK
- Shenzhen Key Laboratory of Metabolic Health, Centre for Energy Metabolism and Reproduction, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, PRC
- Centre of Excellence in Animal Evolution and Genetics, Kunming, PRC
- State Key Laboratory of Molecular Developmental Biology, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, PRC
| | - Kate Britton
- Department of Archaeology, University of Aberdeen, Aberdeen, Scotland AB39 2PN, UK
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Wasserfurth P, Huelsemann F, Koehler K. Changes in urinary stable nitrogen isotope ratios during controlled short-term energy deficit: a proof-of-principle analysis. Eur J Nutr 2024; 63:919-926. [PMID: 38243136 PMCID: PMC10948555 DOI: 10.1007/s00394-023-03320-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2023] [Accepted: 12/29/2023] [Indexed: 01/21/2024]
Abstract
PURPOSE Stable isotope ratios of nitrogen (δ15N) have previously been shown to increase in human hair during periods of catabolism. The goal of this study was to assess changes in δ15N in urinary urea (δ15Nurea) and Δ15N during a short-term controlled energy deficit. METHODS We analyzed samples from 6 recreationally active men (25 ± 1 years, BMI: 23.5 ± 0.6 kg/m2) who participated in a repeated measures cross-over study involving 4 days of energy deficit (ED, ~ 15 kcal/kg FFM) without and with exercise (ED-EX, ED + EX) and control conditions in energy balance (CON-EX, CON + EX). δ15Nurea was analyzed from urine samples, and Δ15N was calculated as δ15Nurea-δ15Ndiet, with δ15Ndiet obtained from diet prescriptions. RESULTS δ15Nurea was significantly elevated in ED-EX (4.4 ± 0.2‰) when compared to CON-EX (3.7 ± 0.1‰; p = 0.026) and CON + EX (3.34 ± 0.13‰, p = 0.001). As a consequence, Δ15N was positive in ED-EX (0.2 ± 0.2‰) and remained negative in ED + EX (- 0.6 ± 0.5‰), CON-EX (- 1.0 ± 0.2) and CON + EX (- 1.1 ± 0.2). Differences in Δ15N were significant between ED-EX and CON-EX (p = 0.005) and ED-EX and CON + EX (p = 0.006). CONCLUSION Our results suggest that δ15Nurea and subsequently Δ15N are responsive to a short-term energy deficit, likely due to increased amino acid oxidation to meet energy demands and preferable elimination of 14N.
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Affiliation(s)
- Paulina Wasserfurth
- Department of Health and Sport Sciences, TUM School of Medicine and Health, Technical University of Munich, Munich, Germany
| | - Frank Huelsemann
- Institute of Biochemistry, German Sport University, Cologne, Germany
| | - Karsten Koehler
- Department of Health and Sport Sciences, TUM School of Medicine and Health, Technical University of Munich, Munich, Germany.
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Vedel G, de la Peña E, Moreno-Rojas JM, Carranza J. Is the Intrasexual Competition in Male Red Deer Reflected in the Ratio of Stable Isotopes of Carbon and Nitrogen in Faeces? Animals (Basel) 2023; 13:2397. [PMID: 37508173 PMCID: PMC10375991 DOI: 10.3390/ani13142397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Revised: 07/12/2023] [Accepted: 07/18/2023] [Indexed: 07/30/2023] Open
Abstract
Isotopic analysis of carbon and nitrogen in faeces is a reliable methodology for studying ecology in wildlife. Here, we tested this technique to detect variations in carbon and nitrogen isotopic ratios (δ13C and δ15N) in two different intrasexual competition scenarios of male Iberian red deer (Cervus elaphus hispanicus) using faeces of individuals collected during hunting actions in South-eastern Spain. The carbon isotopic ratio (δ13C) was not found to be significant, likely due to similar diet composition in all individuals. However, the nitrogen isotopic ratio (δ15N) was found to be lower in populations where sexual competition between males during the rut was higher compared to low-competition populations. Therefore, this study suggests a different use of proteins by an individual male red deer depending on the sexually competitive context in which he lives. Although further research is needed, these results show the potential of isotopic analysis as a tool for studying individual and populational variations in the level of intrasexual competition, with implications in evolutionary ecology and population management.
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Affiliation(s)
- Giovanni Vedel
- Wildlife Research Unit (UiRCP), University of Córdoba, 14071 Córdoba, Spain
| | - Eva de la Peña
- Wildlife Research Unit (UiRCP), University of Córdoba, 14071 Córdoba, Spain
- Instituto de Investigación en Recursos Cinegéticos, IREC (CSIC, UCLM, JCCM), Ronda de Toledo 12, 13005 Ciudad Real, Spain
| | - Jose Manuel Moreno-Rojas
- Department of Agroindustry and Food Quality, Andalusian Institute of Agricultural and Fisheries Research and Training (IFAPA), Alameda del Obispo. Avda. Menéndez Pidal, s/n., 14071 Córdoba, Spain
| | - Juan Carranza
- Wildlife Research Unit (UiRCP), University of Córdoba, 14071 Córdoba, Spain
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Navarro-Castilla Á, Hernández MC, Barja I. An Experimental Study in Wild Wood Mice Testing Elemental and Isotope Analysis in Faeces to Determine Variations in Food Intake Amount. Animals (Basel) 2023; 13:ani13071176. [PMID: 37048432 PMCID: PMC10093285 DOI: 10.3390/ani13071176] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2023] [Revised: 03/16/2023] [Accepted: 03/24/2023] [Indexed: 03/30/2023] Open
Abstract
The analysis of carbon and nitrogen elemental (C, N) and isotopic compositions (δ13C, δ15N) in faeces are considered reliable methodologies for the study of diet in wildlife. Here, we tested the suitability of these techniques to detect variations in the amount of food intake. We captured wild wood mice (Apodemus sylvaticus) with Sherman live traps where bait access was initially free, and later it was experimentally limited inside by four different devices to cause intended variations in the amount ingested. The total C and N (%) and stable δ13C and δ15N isotopic values were determined for the bait and in mice faecal samples. Faecal values were lower than bait ones except for N, likely due to animal matter ingested before capture. No significant differences in total C, N and δ13C were found due to individual traits. However, breeding males showed higher δ15N values than breeding females, probably due to differences in energy and protein demands between both sexes during the breeding season. Only δ13C detected food intake variations (≥2 g). Despite further research being needed, these results initially support the potential of δ13C to provide information on the amount ingested, thus being useful to complement trophic ecology studies.
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Affiliation(s)
- Álvaro Navarro-Castilla
- Eco- and Ethophysiology Lab, Departamento de Biología, Universidad Autónoma de Madrid, 28049 Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, C. Darwin 2, 28049 Madrid, Spain
- Correspondence:
| | - M. Carmen Hernández
- Eco- and Ethophysiology Lab, Departamento de Biología, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - Isabel Barja
- Eco- and Ethophysiology Lab, Departamento de Biología, Universidad Autónoma de Madrid, 28049 Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, C. Darwin 2, 28049 Madrid, Spain
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Oelze VM, O'Neal I, Wittig RM, Kupczik K, Schulz-Kornas E, Hohmann G. A skew in poo: Biases in primate fecal isotope analysis and recommendations for standardized sample preparation. Am J Primatol 2023; 85:e23436. [PMID: 36239010 DOI: 10.1002/ajp.23436] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2022] [Revised: 08/29/2022] [Accepted: 09/05/2022] [Indexed: 01/05/2023]
Abstract
Feces are a treasure trove in the study of animal behavior and ecology. Stable carbon and nitrogen isotope analysis allows to assess the dietary niches of elusive primate species and primate breastfeeding behavior. However, some fecal isotope data may unwillingly be biased toward the isotope ratios of undigested plant matter, requiring more consistent sample preparation protocols. We assess the impact of this potential data skew in 114 fecal samples of wild bonobos (Pan paniscus) by measuring the isotope differences (Δ13 C, Δ15 N) between bulk fecal samples containing larger particles (>1 mm) and filtered samples containing only small particles (<1 mm). We assess the influence of fecal carbon and nitrogen content (ΔC:N) and sample donor age (subadult, adult) on the resulting Δ13 C, Δ15 N values (n = 228). Additionally, we measure the isotope ratios in three systematically sieved fecal samples of chimpanzees (Pan troglodytes verus), with particle sizes ranging from 20 μm to 8 mm (n = 30). We found differences in fecal carbon and nitrogen content, with the smaller fecal fraction containing more nitrogen on average. While the Δ13 C values were small and not affected by age or ΔC:N, the Δ15 N values were significantly influenced by fecal ΔC:N, possibly resulting from the differing proportions of undigested plant macroparticles. Significant relationships between carbon stable isotope ratios (δ13 C) values and %C in large fecal fractions of both age groups corroborated this assessment. Δ15 N values were significantly larger in adults than subadults, which should be of concern in isotope studies comparing adult females with infants to assess breastfeeding. We found a random variation of up to 3.0‰ in δ13 C and 2.0‰ in nitrogen stable isotope ratios within the chimpanzee fecal samples separated by particle sizes. We show that particle size influences isotope ratios and propose a simple, cost-effective filtration method for primate feces to exclude larger undigested food particles from the analysis, which can easily be adopted by labs worldwide.
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Affiliation(s)
- Vicky M Oelze
- Anthropology Department, University of California, Santa Cruz, Santa Cruz, California, USA
| | - Isabella O'Neal
- Anthropology Department, University of California, Santa Cruz, Santa Cruz, California, USA
| | - Roman M Wittig
- Department of Human Behavior, Max Planck Institute for Evolutionary Anthropology, Ecology and Culture, Leipzig, Germany.,Institute for Cognitive Sciences, CNRS UMR5229 University Claude Bernard Lyon 1, Bron, France
| | - Kornelius Kupczik
- Department of Anthropology, Faculty of Social Sciences, University of Chile, Ñuñoa, Santiago de Chile, Chile.,Department of Human Evolution, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Ellen Schulz-Kornas
- Department of Cariology, Endodontology and Periodontology, University of Leipzig, Leipzig, Germany
| | - Gottfried Hohmann
- Department of Human Behavior, Max Planck Institute for Evolutionary Anthropology, Ecology and Culture, Leipzig, Germany.,Max-Planck-Institute of Animal Behavior, Konstanz, Germany
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Carboni S, Dezeure J, Cowlishaw G, Huchard E, Marshall HH. Stable isotopes reveal the effects of maternal rank and infant age on weaning dynamics in wild chacma baboons. Anim Behav 2022. [DOI: 10.1016/j.anbehav.2022.08.010] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Cooper EB, Watowich MM, Beeby N, Whalen C, Montague MJ, Brent LJN, Snyder-Mackler N, Higham JP. Concentrations of urinary neopterin, but not suPAR, positively correlate with age in rhesus macaques. Front Ecol Evol 2022. [DOI: 10.3389/fevo.2022.1007052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Identifying biomarkers of age-related changes in immune system functioning that can be measured non-invasively is a significant step in progressing research on immunosenescence and inflammaging in free-ranging and wild animal populations. In the present study, we aimed to investigate the suitability of two urinary compounds, neopterin and suPAR, as biomarkers of age-related changes in immune activation and inflammation in a free-ranging rhesus macaque (Macaca mulatta) population. We also investigated age-associated variation in gene transcription from blood samples to understand the underlying proximate mechanisms that drive age-related changes in urinary neopterin or suPAR. Neopterin was significantly positively correlated with age, and had a moderate within-individual repeatability, indicating it is applicable as a biomarker of age-related changes. The age-related changes in urinary neopterin are not apparently driven by an age-related increase in the primary signaler of neopterin, IFN-y, but may be driven instead by an age-related increase in both CD14+ and CD14− monocytes. suPAR was not correlated with age, and had low repeatability within-individuals, indicating that it is likely better suited to measure acute inflammation rather than chronic age-related increases in inflammation (i.e., “inflammaging”). Neopterin and suPAR had a correlation of 25%, indicating that they likely often signal different processes, which if disentangled could provide a nuanced picture of immune-system function and inflammation when measured in tandem.
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Found R, Baker JA, Fryxell JM, McLaren AA, Rodgers AR, Shuter J, Thompson I, Patterson BR. Stable isotopes indicate reduced body condition of caribou in disturbed areas. ANIM BIOL 2022. [DOI: 10.1163/15707563-bja10092] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
Abstract
Abstract
Understanding the impacts of disturbance on individual fitness is important for wildlife management, and critical for the conservation of species at risk. We compared the fitness and seasonal range use of 39 woodland caribou in Ontario study areas contrasted by their level of human disturbance. We previously showed that wolf density in the disturbed site was higher, likely due to human-modified landscapes favoring moose, the primary prey of wolves. In this paper we address three objectives. First, because the assimilation of dietary nitrogen is heavily influenced by metabolic processes related to stress, we hypothesized that ratios of nitrogen isotopes (N) may indicate changes in body condition in ungulates and be useful proxies for changes in fitness. Second, we predicted that increased predation risk from wolves in disturbed areas would result in measurable declines in caribou body condition. Third, we hypothesized that one mechanism for fitness declines among caribou in the disturbed area was increased wolf activity restricting caribou seasonal movements. We showed change in N in the tissues of caribou was correlated with body condition scoring using fat assessment. We used GPS collars to quantify seasonal range use and found that fitness was higher, and seasonal range overlap was lower, in caribou using the nondisturbed area. Winter fitness declines were significantly larger in the more disturbed area. Our study identifies another mechanism by which the cumulative effects of human-disturbed landscapes on caribou fitness could contribute to global declines in caribou populations.
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Affiliation(s)
- Rob Found
- Ontario Ministry of Natural Resources and Forestry, Wildlife Research and Monitoring Section, Trent University, DNA Building, 2140 East Bank Drive, Peterborough, Ontario, Canada, K9J 7B8
| | - James A. Baker
- Ontario Ministry of Natural Resources and Forestry, Centre for Northern Forest Ecosystem Research, 103-421 James Street South, Thunder Bay, Ontario, Canada, P7E 2V6
| | - John M. Fryxell
- University of Guelph, Department of Integrative Biology, Guelph, Ontario, Canada, N1G 2W1
| | - Ashley A.D. McLaren
- Ontario Ministry of Natural Resources and Forestry, Wildlife Research and Monitoring Section, Trent University, DNA Building, 2140 East Bank Drive, Peterborough, Ontario, Canada, K9J 7B8
| | - Arthur R. Rodgers
- Ontario Ministry of Natural Resources and Forestry, Centre for Northern Forest Ecosystem Research, 103-421 James Street South, Thunder Bay, Ontario, Canada, P7E 2V6
| | - Jennifer Shuter
- Ontario Ministry of Natural Resources and Forestry, Centre for Northern Forest Ecosystem Research, 103-421 James Street South, Thunder Bay, Ontario, Canada, P7E 2V6
| | - Ian Thompson
- University of Guelph, Department of Integrative Biology, Guelph, Ontario, Canada, N1G 2W1
| | - Brent R. Patterson
- Ontario Ministry of Natural Resources and Forestry, Wildlife Research and Monitoring Section, Trent University, DNA Building, 2140 East Bank Drive, Peterborough, Ontario, Canada, K9J 7B8
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Ogilvy C, Constantine R, Bury SJ, Carroll EL. Diet variation in a critically endangered marine predator revealed with stable isotope analysis. ROYAL SOCIETY OPEN SCIENCE 2022; 9:220470. [PMID: 35991335 PMCID: PMC9382206 DOI: 10.1098/rsos.220470] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Accepted: 07/20/2022] [Indexed: 06/15/2023]
Abstract
Understanding the foraging ecology of animals gives insights into their trophic relationships and habitat use. We used stable isotope analysis to understand the foraging ecology of a critically endangered marine predator, the Māui dolphin. We analysed carbon and nitrogen isotope ratios of skin samples (n = 101) collected from 1993 to 2021 to investigate temporal changes in diet and niche space. Genetic monitoring associated each sample with a DNA profile which allowed us to assess individual and population level changes in diet. Potential prey and trophic level indicator samples were also collected (n = 166; 15 species) and incorporated in Bayesian mixing models to estimate importance of prey types to Māui dolphin diet. We found isotopic niche space had decreased over time, particularly since the 2008 implementation of a Marine Mammal Sanctuary. We observed a decreasing trend in ∂13C and ∂15N values, but this was not linear and several fluctuations in isotope values occurred over time. The largest variation in isotope values occurred during an El Niño event, suggesting that prey is influenced by climate-driven oceanographic variables. Mixing models indicated relative importance of prey remained constant since 2008. The isotopic variability observed here is not consistent with individual specialization, rather it occurs at the population level.
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Affiliation(s)
- Courtney Ogilvy
- School of Biological Sciences, University of Auckland, Auckland 1010, New Zealand
| | - Rochelle Constantine
- School of Biological Sciences, University of Auckland, Auckland 1010, New Zealand
- Institute of Marine Science, University of Auckland, Auckland 1010, New Zealand
| | - Sarah J. Bury
- National Institute of Water and Atmospheric Research, Greta Point, Wellington 6021, New Zealand
| | - Emma L. Carroll
- School of Biological Sciences, University of Auckland, Auckland 1010, New Zealand
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Reconstructing Neanderthal diet: The case for carbohydrates. J Hum Evol 2021; 162:103105. [PMID: 34923240 DOI: 10.1016/j.jhevol.2021.103105] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2021] [Revised: 10/19/2021] [Accepted: 10/20/2021] [Indexed: 12/22/2022]
Abstract
Evidence for plants rarely survives on Paleolithic sites, while animal bones and biomolecular analyses suggest animal produce was important to hominin populations, leading to the perspective that Neanderthals had a very-high-protein diet. But although individual and short-term survival is possible on a relatively low-carbohydrate diet, populations are unlikely to have thrived and reproduced without plants and the carbohydrates they provide. Today, nutritional guidelines recommend that around half the diet should be carbohydrate, while low intake is considered to compromise physical performance and successful reproduction. This is likely to have been the same for Paleolithic populations, highlighting an anomaly in that the basic physiological recommendations do not match the extensive archaeological evidence. Neanderthals had large, energy-expensive brains and led physically active lifestyles, suggesting that for optimal health they would have required high amounts of carbohydrates. To address this anomaly, we begin by outlining the essential role of carbohydrates in the human reproduction cycle and the brain and the effects on physical performance. We then evaluate the evidence for resource availability and the archaeological evidence for Neanderthal diet and investigate three ways that the anomaly between the archaeological evidence and the hypothetical dietary requirements might be explained. First, Neanderthals may have had an as yet unidentified genetic adaptation to an alternative physiological method to spare blood glucose and glycogen reserves for essential purposes. Second, they may have existed on a less-than-optimum diet and survived rather than thrived. Third, the methods used in dietary reconstruction could mask a complex combination of dietary plant and animal proportions. We end by proposing that analyses of Paleolithic diet and subsistence strategies need to be grounded in the minimum recommendations throughout the life course and that this provides a context for interpretation of the archaeological evidence from the behavioral and environmental perspectives.
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O'Donoghue R, Walker D, Beaumont J. Children of the abyss: Investigating the association between isotopic physiological stress and skeletal pathology in London during the Industrial Revolution. INTERNATIONAL JOURNAL OF PALEOPATHOLOGY 2021; 35:61-80. [PMID: 34715484 DOI: 10.1016/j.ijpp.2021.10.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Revised: 10/05/2021] [Accepted: 10/05/2021] [Indexed: 06/13/2023]
Abstract
OBJECTIVE This project sought to investigate whether an association may be observed between isotopic stress indicators and skeletal evidence of pathological conditions. MATERIALS Deciduous and permanent teeth of 15 non-adults from two contemporaneous mid-19th century London burial grounds (City Bunhill, Lukin Street). METHODS δ13C and δ15N was measured in the incrementally sectioned dentine collagen. Isotopic profiles for each individual included death during tooth development. RESULTS Individuals with skeletal evidence of chronic pathological conditions (e.g., rickets, tuberculosis) exhibited raised δ15N values of 0.5-1.7‰ in the months prior to death. Isotopic change consistent with chronic physiological stress prior to death was also recorded in two individuals with no skeletal evidence of disease. An offset was observed between co-forming bone and dentine δ15N values in both populations, indicating that bone and dentine are not recording the same isotopic changes. CONCLUSIONS Isotopic change consistent with chronic physiological stress was observed in both those with and without skeletal evidence of disease, suggesting that adaptation to chronic stress in childhood was not uncommon within these 19th century London populations. SIGNIFICANCE Chronic physiological stress prior to death may be seen in the incrementally sampled dentine of non-adults who die during tooth formation. LIMITATIONS The temporal resolution of current dentine micro-sampling methods may mask or minimise visibility of shorter-term periods of stress or dietary change. SUGGESTIONS FOR FURTHER RESEARCH Future research should further explore the relationship between specific skeletal pathologies and isotopic evidence for stress.
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Affiliation(s)
- Ruth O'Donoghue
- School of Archaeological and Forensic Sciences, University of Bradford, Richmond Road, Bradford, BD7 1DP, UK.
| | - Don Walker
- Museum of London Archaeology, Mortimer Wheeler House, 46 Eagle Wharf Road, London, N1 7ED, UK
| | - Julia Beaumont
- School of Archaeological and Forensic Sciences, University of Bradford, Richmond Road, Bradford, BD7 1DP, UK
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12
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Sergiel A, Barja I, Navarro-Castilla Á, Zwijacz-Kozica T, Selva N. Losing seasonal patterns in a hibernating omnivore? Diet quality proxies and faecal cortisol metabolites in brown bears in areas with and without artificial feeding. PLoS One 2020; 15:e0242341. [PMID: 33180870 PMCID: PMC7660533 DOI: 10.1371/journal.pone.0242341] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2020] [Accepted: 11/01/2020] [Indexed: 11/19/2022] Open
Abstract
Bears are omnivores particularly well-adapted to variations in the nutritional composition, quality and availability of food resources. Artificial feeding practices have been shown to strongly influence diet composition and seasonality, as well as to cause alterations in wintering and movement in brown bears (Ursus arctos). In this study, we investigated seasonal differences (hypophagia vs hyperphagia) in food quality of two brown bear subpopulations in the Polish Carpathians using faecal nitrogen (FN) and carbon (FC) estimates. The subpopulations inhabit areas that differ in artificial feeding practices: no artificial feeding occurs in the western subpopulation (Tatra Mountains), while artificial food targeted to ungulates is provided and used year-round in the eastern subpopulation (Bieszczady Mountains). We also compared these results with faecal cortisol metabolites (FCM) to explore how FN and FC correlate with the hypothalamic-pituitary-adrenal axis activity and if the seasonal patterns are apparent. We found that in Tatra Mts bears fed on significantly higher quality diet, as shown by FN and FC values, and had significantly higher FC levels in hyperphagia, when they accumulate fat reserves for wintering. The pattern in FCM levels for Tatra subpopulation followed the changes in energy intake during the seasons of hypo- and hyperphagia, while in Bieszczady Mts, the area with intensive feeding, no seasonal patterns could be observed. Artificial feeding practices may disrupt nutrient phenology and seasonality, relative to subpopulations with natural diets. We showed that the availability of human-provided foods may alter not only the overall dietary quality, but also hormonal patterns linked to seasonal nutritional requirements. Combining FN, FC and FCM proved to be a useful tool for reconstructing diet quality and related physiological patterns.
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Affiliation(s)
- Agnieszka Sergiel
- Institute of Nature Conservation, Polish Academy of Sciences, Krakow, Poland
- * E-mail:
| | - Isabel Barja
- Department of Biology, Universidad Autónoma de Madrid, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM) Universidad Autónoma de Madrid, Madrid, Spain
| | | | | | - Nuria Selva
- Institute of Nature Conservation, Polish Academy of Sciences, Krakow, Poland
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Cheng X, DeGiorgio M. Flexible Mixture Model Approaches That Accommodate Footprint Size Variability for Robust Detection of Balancing Selection. Mol Biol Evol 2020; 37:3267-3291. [PMID: 32462188 PMCID: PMC7820363 DOI: 10.1093/molbev/msaa134] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Long-term balancing selection typically leaves narrow footprints of increased genetic diversity, and therefore most detection approaches only achieve optimal performances when sufficiently small genomic regions (i.e., windows) are examined. Such methods are sensitive to window sizes and suffer substantial losses in power when windows are large. Here, we employ mixture models to construct a set of five composite likelihood ratio test statistics, which we collectively term B statistics. These statistics are agnostic to window sizes and can operate on diverse forms of input data. Through simulations, we show that they exhibit comparable power to the best-performing current methods, and retain substantially high power regardless of window sizes. They also display considerable robustness to high mutation rates and uneven recombination landscapes, as well as an array of other common confounding scenarios. Moreover, we applied a specific version of the B statistics, termed B2, to a human population-genomic data set and recovered many top candidates from prior studies, including the then-uncharacterized STPG2 and CCDC169-SOHLH2, both of which are related to gamete functions. We further applied B2 on a bonobo population-genomic data set. In addition to the MHC-DQ genes, we uncovered several novel candidate genes, such as KLRD1, involved in viral defense, and SCN9A, associated with pain perception. Finally, we show that our methods can be extended to account for multiallelic balancing selection and integrated the set of statistics into open-source software named BalLeRMix for future applications by the scientific community.
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Affiliation(s)
- Xiaoheng Cheng
- Huck Institutes of Life Sciences, Pennsylvania State University, University Park, PA
- Department of Biology, Pennsylvania State University, University Park, PA
| | - Michael DeGiorgio
- Department of Computer and Electrical Engineering and Computer Science, Florida Atlantic University, Boca Raton, FL
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Oelze VM, Percher AM, Nsi Akoué G, El Ksabi N, Willaume E, Charpentier MJE. Seasonality and interindividual variation in mandrill feeding ecology revealed by stable isotope analyses of hair and blood. Am J Primatol 2020; 82:e23206. [PMID: 33075182 DOI: 10.1002/ajp.23206] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2020] [Revised: 10/02/2020] [Accepted: 10/03/2020] [Indexed: 11/11/2022]
Abstract
Mandrills are large-bodied terrestrial forest primates living in particularly large social groups of several hundred individuals. Following these groups in the wild to assess differences in diet over time as well as among individuals is demanding. We here use isotope analyses in blood and hair obtained during repeated captures of 43 identified free-ranging mandrills (Mandrillus sphinx) from Southern Gabon, to test how dietary variation relates to the season as well as an individual's age and sex. We measured the stable carbon (δ13 C‰) and nitrogen (δ15 N‰) isotope ratios in 46 blood and 214 hair section samples as well as from a small selection of mandrill foods (n = 24). We found some seasonal isotopic effects, with lower δ13 C values but higher δ15 N values observed during the highly competitive long dry season compared to the fruit-rich long rainy season. Variation in δ13 C was further predicted by individual age, with higher δ13 C values generally found in younger individuals suggesting that they may consume more high canopy fruit than older individuals, or that older individuals consume more low canopy foliage. The best predictor for δ15 N values was the interaction between age and sex, with mature and reproductively active males revealing the highest δ15 N values, despite the observation that males consume substantially less animal food items than females. We interpret high δ15 N values in these mature male mandrill blood and hair sections to be the result of nutritional stress associated with intense male-male competition, particularly during mating season. This is the first study showing isotopic evidence for nutritional stress in a free-ranging primate species and may spark further investigations into male mandrill diet and energy balance.
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Affiliation(s)
- Vicky M Oelze
- Department of Anthropology, University of California Santa Cruz, Santa Cruz, California, USA.,Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Alice M Percher
- Equipe Biologie Evolutive Humaine, Institut des Sciences de l'Évolution de Montpellier UMR5554, CNRS, IRD, EPHE, Université de Montpellier, Montpellier, France
| | - Gontran Nsi Akoué
- Département de Biologie, Université des Sciences et Techniques de Masuku, Franceville, Gabon
| | | | | | - Marie J E Charpentier
- Equipe Biologie Evolutive Humaine, Institut des Sciences de l'Évolution de Montpellier UMR5554, CNRS, IRD, EPHE, Université de Montpellier, Montpellier, France
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15
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Oelze VM, Wittig RM, Lemoine S, Kühl HS, Boesch C. How isotopic signatures relate to meat consumption in wild chimpanzees: A critical reference study from Taï National Park, Côte d'Ivoire. J Hum Evol 2020; 146:102817. [PMID: 32683168 DOI: 10.1016/j.jhevol.2020.102817] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2019] [Revised: 04/21/2020] [Accepted: 04/21/2020] [Indexed: 11/27/2022]
Abstract
The roots of human hunting and meat eating lie deep in our evolutionary past shared with chimpanzees (Pan troglodytes). From the few habituated wild populations, we know that there is considerable variation in the extent to which chimpanzees consume meat. Expanding our knowledge of meat eating frequencies to more, yet unhabituated, populations requires noninvasive, indirect quantitative techniques. We here evaluate the use of stable isotopes to reconstruct meat-eating behavior in wild chimpanzees. We present hair isotope data (n = 260) of two western chimpanzee (P. troglodytes verus) groups from Taï forest (Côte d'Ivoire) and relate them to directly observed amounts of meat consumed, sex/female reproductive state, and group, while controlling for differences between individuals, seasons, and observation efforts. Succeeding seven months of hunting observations, we collected hair of 25 individuals for sequential analysis of δ15N and δ13C. Hunting success in the 7-month study period varied between the groups, with 25 successful hunts in the East group and only 8 in the North group. However, our models only found a direct relationship between amounts of meat consumed and variation within individual hair δ15N values in the East group, but not in the North group and not when comparing between individuals or groups. Although on average East group individuals consumed more than double the amount of meat than North group individuals, their δ15N values were significantly lower, suggesting that differences in microhabitat are substantial between group territories. The effect of sex/female reproductive state was significant in δ15N and δ13C, suggesting it related to access to food or feeding preferences. We conclude that several factors additional to diet are influencing and thus obscuring the isotope ratios in wild chimpanzee hair, particularly when comparing between sexes and social groups.
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Affiliation(s)
- Vicky M Oelze
- Anthropology Department, University of California Santa Cruz, 1156 High Street, Santa Cruz, CA, 95064, USA; Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, Leipzig, 04103, Germany.
| | - Roman M Wittig
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, Leipzig, 04103, Germany; Taï Chimpanzee Project, CSRS, Abidjan, Ivory Coast
| | - Sylvain Lemoine
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, Leipzig, 04103, Germany; Taï Chimpanzee Project, CSRS, Abidjan, Ivory Coast
| | - Hjalmar S Kühl
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, Leipzig, 04103, Germany
| | - Christophe Boesch
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Deutscher Platz 6, Leipzig, 04103, Germany
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Mantha OL, Huneau JF, Mathé V, Hermier D, Khodorova N, Mariotti F, Fouillet H. Differential changes to splanchnic and peripheral protein metabolism during the diet-induced development of metabolic syndrome in rats. Am J Physiol Endocrinol Metab 2020; 319:E175-E186. [PMID: 32459526 DOI: 10.1152/ajpendo.00061.2020] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Little is known about the effects of the development of metabolic syndrome (MS) on protein and amino acid (AA) metabolism. During this study, we took advantage of the variability in interindividual susceptibility to high fat diet-induced MS to study the relationships between MS, protein synthesis, and AA catabolism in multiple tissues in rats. After 4 mo of high-fat feeding, an MS score (ZMS) was calculated as the average of the z-scores for individual MS components [weight, adiposities, homeostasis model for the assessment of insulin resistance (HOMA-IR), and triglycerides]. In the small intestine, liver, plasma, kidneys, heart, and muscles, tissue protein synthesis was measured by 2H2O labeling, and we evaluated the proportion of tissue AA catabolism (relative to protein synthesis) and nutrient routing to nonindispensable AAs in tissue proteins using natural nitrogen and carbon isotopic distances between tissue proteins and nutrients (Δ15N and Δ13C), respectively. In the liver, protein mass and synthesis increased, whereas the proportion of AA catabolism decreased with ZMS. By contrast, in muscles, we found no association between ZMS and protein mass, protein synthesis (except for a weak positive association in the gastrocnemius muscle only), and proportion of AA catabolism. The development of MS was also associated with altered metabolic flexibility and fatty acid oxidation, as shown by less routing of dietary lipids to nonindispensable AA synthesis in liver and muscle. In conclusion, MS development is associated with a greater gain of both fat and protein masses, with higher protein anabolism that mainly occurs in the liver, whereas muscles probably develop anabolic resistance due to insulin resistance.
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Affiliation(s)
- O L Mantha
- Université Paris-Saclay, AgroParisTech, INRAE, UMR PNCA, 75005, Paris, France
| | - J-F Huneau
- Université Paris-Saclay, AgroParisTech, INRAE, UMR PNCA, 75005, Paris, France
| | - V Mathé
- Université Paris-Saclay, AgroParisTech, INRAE, UMR PNCA, 75005, Paris, France
| | - D Hermier
- Université Paris-Saclay, AgroParisTech, INRAE, UMR PNCA, 75005, Paris, France
| | - N Khodorova
- Université Paris-Saclay, AgroParisTech, INRAE, UMR PNCA, 75005, Paris, France
| | - F Mariotti
- Université Paris-Saclay, AgroParisTech, INRAE, UMR PNCA, 75005, Paris, France
| | - H Fouillet
- Université Paris-Saclay, AgroParisTech, INRAE, UMR PNCA, 75005, Paris, France
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17
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Crossey B, Chimimba C, Plessis CD, Hall G, Ganswindt A. Using faecal glucocorticoid metabolite analyses to elucidate stressors of African wild dogs Lycaon pictus from South Africa. WILDLIFE BIOLOGY 2020. [DOI: 10.2981/wlb.00646] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
Affiliation(s)
- Bruce Crossey
- B. Crossey ✉ , C. Chimimba, G. Hall and A. Ganswindt, Mammal Research Inst. (MRI), Dept of Zoology and Entomology, Univ. of Pretoria, Private Bag X20, Hatfield, 0028 South Africa. BC and AG also at: Endocrine Research
| | - Christian Chimimba
- B. Crossey ✉ , C. Chimimba, G. Hall and A. Ganswindt, Mammal Research Inst. (MRI), Dept of Zoology and Entomology, Univ. of Pretoria, Private Bag X20, Hatfield, 0028 South Africa. BC and AG also at: Endocrine Research
| | - Cole du Plessis
- C. du Plessis, Carnivore Conservation Program, The Endangered Wildlife Trust, Modderfontein, South Africa
| | - Grant Hall
- B. Crossey ✉ , C. Chimimba, G. Hall and A. Ganswindt, Mammal Research Inst. (MRI), Dept of Zoology and Entomology, Univ. of Pretoria, Private Bag X20, Hatfield, 0028 South Africa. BC and AG also at: Endocrine Research
| | - Andre Ganswindt
- B. Crossey ✉ , C. Chimimba, G. Hall and A. Ganswindt, Mammal Research Inst. (MRI), Dept of Zoology and Entomology, Univ. of Pretoria, Private Bag X20, Hatfield, 0028 South Africa. BC and AG also at: Endocrine Research
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18
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Higham JP, Stahl-Hennig C, Heistermann M. Urinary suPAR: a non-invasive biomarker of infection and tissue inflammation for use in studies of large free-ranging mammals. ROYAL SOCIETY OPEN SCIENCE 2020; 7:191825. [PMID: 32257339 PMCID: PMC7062102 DOI: 10.1098/rsos.191825] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/17/2019] [Accepted: 01/17/2020] [Indexed: 06/11/2023]
Abstract
Studies of large free-ranging mammals incorporating physiological measurements typically require the collection of urine or faecal samples, due to ethical and practical concerns over trapping or darting animals. However, there is a dearth of validated biomarkers of immune activation and inflammation that can be measured non-invasively. We here evaluate the utility of urinary measurements of the soluble form of the urokinase plasminogen activator receptor (suPAR), for use as a health marker in studies of wild large mammals. We investigate how urinary suPAR concentrations change in response to viral infection and surgical trauma (inflammation), comparing it to the measurement of a marker of cellular immune activation, urinary neopterin (uNEO), in captive rhesus macaques. We then test the field utility of urinary suPAR, assessing the effects of soil and faecal contamination, sunlight, storage at different temperatures, freeze-thaw cycles, and lyophilization. We find that suPAR concentrations rise markedly in response to both infection and surgery-associated inflammation, unlike uNEO concentrations, which only rise in response to the former. Our field validation demonstrates that urinary suPAR is reasonably robust to many of the issues associated with field collection, sample processing, and storage, as long as samples can be stored in a freezer. Urinary suPAR is thus a promising biomarker applicable for monitoring various aspects of health in wild primates and potentially also other large mammals.
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Affiliation(s)
- James P. Higham
- Department of Anthropology, New York University, 25 Waverly Place, New York, NY 10003, USA
| | - Christiane Stahl-Hennig
- Unit of Infection Models, German Primate Center, Leibniz Institute for Primate Research, Kellnerweg 4, Göttingen 37077, Germany
| | - Michael Heistermann
- Endocrinology Laboratory, German Primate Center, Leibniz Institute for Primate Research, Kellnerweg 4, Göttingen 37077, Germany
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19
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Deschner T, Hohmann G, Ortmann S, Schaebs FS, Behringer V. Urinary total T3 levels as a method to monitor metabolic changes in relation to variation in caloric intake in captive bonobos (Pan paniscus). Gen Comp Endocrinol 2020; 285:113290. [PMID: 31563646 DOI: 10.1016/j.ygcen.2019.113290] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Revised: 09/23/2019] [Accepted: 09/25/2019] [Indexed: 01/03/2023]
Abstract
Monitoring metabolic activity in wild living animals has become of particular interest in the field of ecological research. Methods for the repeated non-invasive sampling of individuals are needed. Thyroid hormones (TH) are involved in the regulation of metabolic activity, and their measurement can be used as a proxy to monitor metabolic changes. During periods of low energy intake, serum TH levels are reduced, leading to a decrease in metabolic activity. Using urine samples collected during a food restriction experiment in captive bonobos we validated a total triiodthyronin (TT3) enzyme immunoassay (EIA) for the monitoring of metabolic changes. We found that the majority of immune reactivity of the assay in the urine samples could be explained through immunoreactivity to T3. Furthermore, urinary T3 was stable through repeated freeze-thaw cycles but prolonged exposure to room temperature lead to degradation. Most importantly, we found that for all animals urinary total T3 levels were higher when more digestible energy was consumed. We concluded that urinary total T3 measurements are a suitable method for monitoring metabolic changes in bonobos and potentially in a wide range of animal species.
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Affiliation(s)
- Tobias Deschner
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Deutscher Platz 6, 04103 Leipzig, Germany.
| | - Gottfried Hohmann
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Deutscher Platz 6, 04103 Leipzig, Germany
| | - Sylvia Ortmann
- Leibniz Institute for Zoo and Wildlife Research, Alfred-Kowalke-Str. 17, 10315 Berlin, Germany
| | - Franka S Schaebs
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Deutscher Platz 6, 04103 Leipzig, Germany
| | - Verena Behringer
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Deutscher Platz 6, 04103 Leipzig, Germany
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20
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Curto A, Mahoney P, Maurer AF, Barrocas-Dias C, Fernandes T, Fahy GE. Effect of different healing stages on stable isotope ratios in skeletal lesions. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2019; 171:285-297. [PMID: 31702830 DOI: 10.1002/ajpa.23958] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/19/2018] [Revised: 10/11/2019] [Accepted: 10/17/2019] [Indexed: 11/06/2022]
Abstract
INTRODUCTION Physiological stress is one of the various factors that can have an impact on stable isotope ratios. However, its effect on bone collagen stable isotope ratios is still not fully understood. This study aims to build on previous research on how different disease stages may affect bone collagen stable isotope ratios. MATERIALS AND METHODS Carbon (δ13 C) and nitrogen (δ15 N) isotope ratios were assessed in 33 skeletons that retained evidence of infectious disease and healed fractures. Samples were taken from active lesions (long bones n = 14; ribs n = 4), healed lesions (long bones n = 10; ribs n = 9), or a fracture callus (long bones n = 9; ribs n = 3). Results were compared to stable isotope ratios calculated for regions on these bones that did not retain evidence of disease or fracture. RESULTS Long bones with active lesions had a significantly higher average δ15 N (δ15 N = 11.1 ± 0.9‰) compared to those without lesions (δ15 N = 10.7 ± 0.7‰; p = .02), while fracture calluses showed the largest range for both δ15 N and δ13 C. There were no significant differences in stable isotope ratios when compared between nonlesion and lesion sites in the ribs. DISCUSSION The increase in δ15 N seen in active lesions, when compared with δ15 N from nonlesion regions on the same long bone, may be a consequence of altered protein metabolism. The high variability of δ15 N and δ13 C in fractures may be related to different healing stages of the calluses. This study suggests that stable isotope data can contribute information about diseases in the past, as well as an individual's response to diseases in the absence of modern medicine and antibiotics.
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Affiliation(s)
- Ana Curto
- Human Osteology Lab, Skeletal Biology Research Centre, School of Anthropology and Conservation, University of Kent, Canterbury, UK.,Research Centre for Anthropology and Health, Department of Life Sciences, University of Coimbra, Coimbra, Portugal
| | - Patrick Mahoney
- Human Osteology Lab, Skeletal Biology Research Centre, School of Anthropology and Conservation, University of Kent, Canterbury, UK
| | | | - Cristina Barrocas-Dias
- HERCULES Laboratory, Évora University, Évora, Portugal.,School of Sciences and Technology, Chemistry Department, University of Évora, Évora, Portugal
| | - Teresa Fernandes
- Research Centre for Anthropology and Health, Department of Life Sciences, University of Coimbra, Coimbra, Portugal.,School of Sciences and Technology, Biology Department, University of Évora, Pólo da Mitra, Évora, Portugal
| | - Geraldine E Fahy
- Human Osteology Lab, Skeletal Biology Research Centre, School of Anthropology and Conservation, University of Kent, Canterbury, UK
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21
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The Importance of Isotopic Turnover for Understanding Key Aspects of Animal Ecology and Nutrition. DIVERSITY-BASEL 2019. [DOI: 10.3390/d11050084] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Stable isotope-based methods have proved to be immensely valuable for ecological studies ranging in focus from animal movements to species interactions and community structure. Nevertheless, the use of these methods is dependent on assumptions about the incorporation and turnover of isotopes within animal tissues, which are oftentimes not explicitly acknowledged and vetted. Thus, the purpose of this review is to provide an overview of the estimation of stable isotope turnover rates in animals, and to highlight the importance of these estimates for ecological studies in terrestrial, freshwater, and marine systems that may use a wide range of stable isotopes. Specifically, we discuss 1) the factors that contribute to variation in turnover among individuals and across species, which influences the use of stable isotopes for diet reconstructions, 2) the differences in turnover among tissues that underlie so-called ‘isotopic clocks’, which are used to estimate the timing of dietary shifts, and 3) the use of turnover rates to estimate nutritional requirements and reconstruct histories of nutritional stress from tissue isotope signatures. As we discuss these topics, we highlight recent works that have effectively used estimates of turnover to design and execute informative ecological studies. Our concluding remarks suggest several steps that will improve our understanding of isotopic turnover and support its integration into a wider range of ecological studies.
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22
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Natural Isotope Abundances of Carbon and Nitrogen in Tissue Proteins and Amino Acids as Biomarkers of the Decreased Carbohydrate Oxidation and Increased Amino Acid Oxidation Induced by Caloric Restriction under a Maintained Protein Intake in Obese Rats. Nutrients 2019; 11:nu11051087. [PMID: 31100870 PMCID: PMC6567081 DOI: 10.3390/nu11051087] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2019] [Revised: 05/10/2019] [Accepted: 05/14/2019] [Indexed: 12/14/2022] Open
Abstract
A growing body of evidence supports a role for tissue-to-diet 15N and 13C discrimination factors (Δ15N and Δ13C), as biomarkers of metabolic adaptations to nutritional stress, but the underlying mechanisms remain poorly understood. In obese rats fed ad libitum or subjected to gradual caloric restriction (CR), under a maintained protein intake, we measured Δ15N and Δ13C levels in tissue proteins and their constitutive amino acids (AA) and the expression of enzymes involved in the AA metabolism. CR was found to lower protein mass in the intestine, liver, heart and, to a lesser extent, some skeletal muscles. This was accompanied by Δ15N increases in urine and the protein of the liver and plasma, but Δ15N decreases in the proteins of the heart and the skeletal muscles, alongside Δ13C decreases in all tissue proteins. In Lys, Δ15N levels rose in the plasma, intestine, and some muscles, but fell in the heart, while in Ala, and to a lesser extent Glx and Asx, Δ13C levels fell in all these tissues. In the liver, CR was associated with an increase in the expression of genes involved in AA oxidation. During CR, the parallel rises of Δ15N in urine, liver, and plasma proteins reflected an increased AA catabolism occurring at the level of the liver metabolic branch point, while Δ15N decreases in cardiac and skeletal muscle proteins indicated increased protein and AA catabolism in these tissues. Thus, an increased protein and AA catabolism results in opposite Δ15N effects in splanchnic and muscular tissues. In addition, the Δ13C decrease in all tissue proteins, reflects a reduction in carbohydrate (CHO) oxidation and routing towards non-indispensable AA, to achieve fuel economy.
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23
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Schillaci MA, Lintlop J, Sumra M, Pizarro M, Jones-Engel L. Hair cortisol and stable carbon and nitrogen isotope ratios in barbary macaques (Macaca sylvanus) from Gibraltar. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2019; 33:831-838. [PMID: 30741464 PMCID: PMC8055468 DOI: 10.1002/rcm.8413] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2018] [Revised: 01/31/2019] [Accepted: 02/04/2019] [Indexed: 06/09/2023]
Abstract
RATIONALE Prolonged exposure to the stress hormone cortisol can precipitate a catabolic state in animals resulting in a negative nitrogen balance and increased excreted nitrogen, possibly affecting stable nitrogen and carbon isotope ratios in animal tissues. Here we test the hypothesis that stress, as measured by hair cortisol, is a significant contributor to variation in δ15 N and δ13 C values in hair. The results of the present study have important implications for the use of stable carbon and nitrogen isotope ratios measured in animal and human tissues to make inferences regarding feeding ecology and diet. METHODS Samples containing roughly 10-20 hairs (approx. 4-6 cm long) were collected from 49 free ranging macaque monkeys (Macaca sylvanus) in Gibraltar. Hair samples were analyzed for stable carbon and nitrogen isotopes by continuous-flow isotope-ratio mass spectrometry. Cortisol extracted from matched hair samples was measured using gas chromatography/mass spectrometry. Cortisol and stable isotope ratios were compared statistically using nonparametric Kruskal-Wallis and Mann-Whitney U tests, as well as Spearman correlation. RESULTS Correlation analysis revealed that although hair δ15 N and δ13 C values were significantly correlated with each other, neither was correlated with cortisol concentrations. Cortisol concentrations were not correlated with age-adjusted body mass index. Age category was correlated with δ13 C values but not with δ15 N values. CONCLUSIONS The results of our study suggest that the cumulative stress experienced by these macaques under typical social and environmental conditions is not a significant contributor to variation in δ15 N and δ13 C values, nor does it have a significant effect on relative body mass.
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Affiliation(s)
- Michael A Schillaci
- Department of Anthropology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C 1A4, Canada
| | - Jessica Lintlop
- Department of Anthropology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C 1A4, Canada
| | - Monika Sumra
- Department of Anthropology, University of Toronto Scarborough, 1265 Military Trail, Toronto, Ontario, M1C 1A4, Canada
| | - Mark Pizarro
- Gibraltar Veterinary Clinic, Rosio Bay, Gibraltar, GX11 1|AA, Gibraltar
| | - Lisa Jones-Engel
- Department of Anthropology, University of Washington, Box 353100, Seattle, WA, 98105, USA
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24
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Wessling EG, Oelze VM, Eshuis H, Pruetz JD, Kühl HS. Stable isotope variation in savanna chimpanzees (Pan troglodytes verus) indicate avoidance of energetic challenges through dietary compensation at the limits of the range. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2019; 168:665-675. [PMID: 30693959 DOI: 10.1002/ajpa.23782] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2018] [Revised: 12/20/2018] [Accepted: 01/02/2019] [Indexed: 11/08/2022]
Abstract
OBJECTIVES Food scarcity is proposed to be a limitation to chimpanzees at the limits of their range; however, such a constraint has never been investigated in this context. We investigated patterns of δ13 C and δ15 N variation along a latitudinal gradient at the northwestern West African chimpanzee (Pan troglodytes verus) range limit with the expectation that isotope ratios of chimpanzees at the range limit will indicate different dietary strategies or higher physiological constraints than chimpanzees further from the edge. MATERIALS AND METHODS We measured δ13 C and δ15 N values in hair (n = 81) and plant food (n = 342) samples from five chimpanzee communities located along a latitudinal gradient in Southeastern Senegal. RESULTS We found clear grouping patterns in hair δ13 C and δ15 N in the four southern sites compared to the northernmost site. Environmental baseline samples collected from these sites revealed overall higher plant δ15 N values at the northernmost site, but similar δ13 C values across sites. By accounting for environmental baseline, Δ13 C and Δ15 N values were clustered for all five sites relative to total Pan variation, but indicated a 13 C-enriched diet at the range limit. DISCUSSION Clustering in Δ13 C and Δ15 N values supports that strategic shifting between preferred and fallback foods is a likely ubiquitous but necessary strategy employed by these chimpanzees to cope with their environment, potentially allowing chimpanzees at their limits to avoid periods of starvation. These results also underline the necessity of accounting for local isotopic baseline differences during inter-site comparison.
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Affiliation(s)
- Erin G Wessling
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.,German Centre for Integrative Biodiversity Research (iDiv), Leipzig, Germany
| | - Vicky M Oelze
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.,Department of Anthropology, University of California Santa Cruz, Santa Cruz, California
| | - Henk Eshuis
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Jill D Pruetz
- Department of Anthropology, Texas State University, San Marcos, Texas
| | - Hjalmar S Kühl
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany.,German Centre for Integrative Biodiversity Research (iDiv), Leipzig, Germany
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25
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Gorokhova E. Individual growth as a non‐dietary determinant of the isotopic niche metrics. Methods Ecol Evol 2017. [DOI: 10.1111/2041-210x.12887] [Citation(s) in RCA: 42] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Affiliation(s)
- Elena Gorokhova
- Department of Environmental Science and Analytical ChemistryStockholm University Stockholm Sweden
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Emery Thompson M. Energetics of feeding, social behavior, and life history in non-human primates. Horm Behav 2017; 91:84-96. [PMID: 27594442 DOI: 10.1016/j.yhbeh.2016.08.009] [Citation(s) in RCA: 45] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/01/2016] [Revised: 08/29/2016] [Accepted: 08/30/2016] [Indexed: 01/05/2023]
Abstract
Energy is a variable of key importance to a wide range of research in primate behavioral ecology, life history, and conservation. However, obtaining detailed data on variation in energetic condition, and its biological consequences, has been a considerable challenge. In the past 20years, tremendous strides have been made towards non-invasive methods for monitoring the physiology of animals in their natural environment. These methods provide detailed, individualized data about energetic condition, as well as energy allocations to growth, reproduction, and somatic health. In doing so, they add much-needed resolution by which to move beyond correlative studies to research programs that can discriminate causes from effects and disaggregate multiple correlated features of the social and physical environment. In this review, I describe the conceptual and methodological approaches for studying primate energetics. I then discuss the core questions about primate feeding ecology, social behavior, and life history that can benefit from physiological studies, highlighting the ways in which recent research has done so. Among these are studies that test, and often refute, common assumptions about how feeding ecology shapes primate biology, and those that reveal proximate associations between energetics and reproductive strategies.
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Affiliation(s)
- Melissa Emery Thompson
- Department of Anthropology, University of New Mexico, MSC01-1040, 500 University Blvd NE, Albuquerque 87131, Mexico.
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Emery Thompson M. Energetics of feeding, social behavior, and life history in non-human primates. Horm Behav 2017; 91:84-96. [PMID: 27594442 DOI: 10.10.1016/j.yhbeh.2016.08.009] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/01/2016] [Revised: 08/29/2016] [Accepted: 08/30/2016] [Indexed: 05/21/2023]
Abstract
Energy is a variable of key importance to a wide range of research in primate behavioral ecology, life history, and conservation. However, obtaining detailed data on variation in energetic condition, and its biological consequences, has been a considerable challenge. In the past 20years, tremendous strides have been made towards non-invasive methods for monitoring the physiology of animals in their natural environment. These methods provide detailed, individualized data about energetic condition, as well as energy allocations to growth, reproduction, and somatic health. In doing so, they add much-needed resolution by which to move beyond correlative studies to research programs that can discriminate causes from effects and disaggregate multiple correlated features of the social and physical environment. In this review, I describe the conceptual and methodological approaches for studying primate energetics. I then discuss the core questions about primate feeding ecology, social behavior, and life history that can benefit from physiological studies, highlighting the ways in which recent research has done so. Among these are studies that test, and often refute, common assumptions about how feeding ecology shapes primate biology, and those that reveal proximate associations between energetics and reproductive strategies.
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Affiliation(s)
- Melissa Emery Thompson
- Department of Anthropology, University of New Mexico, MSC01-1040, 500 University Blvd NE, Albuquerque 87131, Mexico.
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Sergiel A, Hobson KA, Janz DM, Cattet M, Selva N, Kapronczai L, Gryba C, Zedrosser A. Compatibility of preparatory procedures for the analysis of cortisol concentrations and stable isotope ( δ13C, δ15N) ratios: a test on brown bear hair. CONSERVATION PHYSIOLOGY 2017; 5:cox021. [PMID: 28852516 PMCID: PMC5569930 DOI: 10.1093/conphys/cox021] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2016] [Revised: 01/31/2017] [Accepted: 03/13/2017] [Indexed: 06/01/2023]
Abstract
The measurement of naturally occurring glucocorticoids and stable isotopes of several elements has gained importance in wildlife studies in recent decades and opened a myriad of ecological applications. Cortisol and stable isotopes equilibrate in animal tissues over periods of integration related to the growth rate of the tissue, providing information reflecting systemic cortisol secretion and dietary intake. Sample preparation shares the common step of first cleaning the sample of external contamination. However, it is not well understood how different solvents used in sample preparation affect isotopic and cortisol values, and whether it is safe to follow the same procedures for both measures to optimize analyses of the same sample. We conducted an experiment to compare different preparation protocols for the analysis of cortisol concentrations and stable carbon (δ13C) and nitrogen (δ15N) isotope ratios in hair. Hair samples from 12 brown bears (Ursus arctos) were each divided into five aliquots; two aliquots were rinsed with a 2:1 chloroform:methanol (v/v) mixture with one aliquot ground prior to cortisol analysis and the other left intact for stable isotope analyses; two aliquots were washed with methanol with one aliquot ground prior to cortisol analysis and the other left intact for stable isotope analyses; and one aliquot washed with methanol and ground prior to stable isotope analyses. The cortisol, δ13C and δ15N values remained consistent following all treatments. Our results indicate that hair samples rinsed with a 2:1 chloroform:methanol mixture or washed with methanol can be used for both types of analyses. Further, hair that has been ground in a standard hair cortisol procedure can also be used for stable isotope analysis. This information is important for improving laboratory efficiency and compatibility of procedures used for wildlife physiological ecology studies where concurrent measurements of cortisol and stable isotopes in hair are required.
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Affiliation(s)
- Agnieszka Sergiel
- Institute of Nature Conservation, Polish Academy of Sciences, 31120 Krakow, Poland
| | - Keith A. Hobson
- Environment Canada, 11 Innovation Blvd., Saskatoon, Saskatchewan, CanadaS7N 3H5
- Department of Biology, University of Western Ontario, London, Ontario, CanadaN6A 5B7
| | - David M. Janz
- Department of Veterinary Biomedical Sciences, University of Saskatchewan, Saskatoon, Saskatchewan, CanadaS7N 5B4
| | - Marc Cattet
- RGL Recovery Wildlife Health & Veterinary Services, Saskatoon, Saskatchewan, CanadaS7H 4A6
- Department of Veterinary Pathology, University of Saskatchewan, Saskatoon, Saskatchewan, CanadaS7N 5B4
| | - Nuria Selva
- Institute of Nature Conservation, Polish Academy of Sciences, 31120 Krakow, Poland
| | - Luciene Kapronczai
- Toxicology Centre, University of Saskatchewan, Saskatoon, Saskatchewan, CanadaS7N 5B3
| | - Chantel Gryba
- Environment Canada, 11 Innovation Blvd., Saskatoon, Saskatchewan, CanadaS7N 3H5
| | - Andreas Zedrosser
- Department of Natural Sciences and Environmental Health, University College of Southeast Norway, 3800 Bø, Norway
- Institute for Wildlife Biology and Game Management, University for Natural Resources and Life Sciences, 1180 Vienna, Austria
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Bădescu I, Katzenberg MA, Watts DP, Sellen DW. A novel fecal stable isotope approach to determine the timing of age-related feeding transitions in wild infant chimpanzees. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2016; 162:285-299. [PMID: 27768227 DOI: 10.1002/ajpa.23116] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2016] [Revised: 07/13/2016] [Accepted: 09/30/2016] [Indexed: 12/16/2022]
Abstract
OBJECTIVES Determining nutritional development in wild primates is difficult through observations because confirming dietary intake is challenging. Physiological measures are needed to determine the relative contributions of maternal milk and other foods at different ages, and time of weaning. We used fecal stable carbon and nitrogen isotopes (δ13 C, δ15 N) and fecal nitrogen concentrations (%N) from wild chimpanzees at Ngogo, Uganda, to derive physiological dietary indicators during the transition from total reliance on maternal milk to adult foods after weaning. MATERIALS AND METHODS We analyzed 560 fecal samples collected non-invasively from 48 infants, their mothers, and 6 juvenile siblings. Most infant and juvenile samples (90%) were matched to samples collected from mothers on the same day. Isotopic assessments were compared with observations of nursing and feeding. RESULTS Infants ≤1 year old showed average δ15 N, δ13 C and %N ratios that were 2.0‰, 0.8‰ and 1.3% greater than their mothers, respectively, interpreted as trophic level effects. Although data collected on newborns were few, results suggest that solid foods were consumed within 2-5 months after birth. Trophic level differences decreased steadily after 1 year, which indicates a decreasing relative contribution of milk to the diet. Isotopic results indicated infants were weaned by 4.5 years old-more than a year earlier than observations of nipple contacts ceased, which revealed the occurrence of "comfort nursing." Juvenile isotopic signatures indicate no nursing overlap between siblings. DISCUSSION Our results resemble the stable isotope differences of human babies. This study contributes to a model of chimpanzee nutritional development required to understand early life history patterns in hominins.
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Affiliation(s)
- Iulia Bădescu
- Department of Anthropology, University of Toronto, Toronto, Ontario, Canada, M5S 2S2
| | - M Anne Katzenberg
- Department of Anthropology and Archaeology, University of Calgary, Calgary, Alberta, Canada, T2N 1N4
| | - David P Watts
- Department of Anthropology, Yale University, New Haven, Connecticut, 0511
| | - Daniel W Sellen
- Department of Anthropology, University of Toronto, Toronto, Ontario, Canada, M5S 2S2
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Stevens RE, O'Connell TC. Red deer bone and antler collagen are not isotopically equivalent in carbon and nitrogen. RAPID COMMUNICATIONS IN MASS SPECTROMETRY : RCM 2016; 30:1969-1984. [PMID: 27501431 DOI: 10.1002/rcm.7670] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2015] [Revised: 06/16/2016] [Accepted: 06/16/2016] [Indexed: 06/06/2023]
Abstract
RATIONALE Bone and antler collagen δ(13) C and δ(15) N values are often assumed to be equivalent when measured in palaeodietary, palaeoclimate and palaeocological studies. Although compositionally similar, bone grows slowly and is remodelled whereas antler growth is rapid and remodelling does not occur. These different patterns of growth could result in isotopic difference within antler and between the two tissue types. Here we test whether red deer (Cervus elaphus) bone and antler δ(13) C and δ(15) N values are equivalent, and whether intra-antler isotopic values are uniform. METHODS Bone and antler were isotopically analysed from six stags that lived in a temperate maritime climate on the Isle of Rum, Scotland. Multiple antlers from different years were sampled per individual, together with a single bone sample per individual. Up to 12 samples were taken along the length of each antler (total of 25 antlers, 259 samples) so that a chronological record of the isotopic composition during antler growth could be obtained. Collagen was extracted and its δ(13) C and δ(15) N values were measured by continuous-flow isotope ratio mass spectrometry. RESULTS Intra-antler collagen isotope signatures vary, and show that not all antlers from an individual or a growth year are equivalent in carbon and nitrogen isotopic ratios. δ(15) N values typically increase with distance along antler length, but no overall trend is observed in δ(13) C values. An isotopic offset is visible between bone and antler, with bone δ(13) C and δ(15) N values being higher in most cases. CONCLUSIONS Bone and antler collagen δ(13) C and δ(15) N values are not isotopically equivalent and are therefore not directly comparable in palaeodietary, palaeoclimate and palaeocological studies. Bone and antler collagen isotopic differences probably relate to differential metabolic processes during the formation of the two tissues. Intra- and inter-antler isotopic variations probably reflect the isotopic composition of an individual's diet rather than physiological parameters, and may have the potential to provide high-resolution individual-specific information in modern and ancient cervid populations. Copyright © 2016 John Wiley & Sons, Ltd.
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Affiliation(s)
- Rhiannon E Stevens
- McDonald Institute for Archaeological Research, University of Cambridge, Downing Street, Cambridge, CB2 3ER, UK
| | - Tamsin C O'Connell
- McDonald Institute for Archaeological Research, University of Cambridge, Downing Street, Cambridge, CB2 3ER, UK
- Department of Archaeology & Anthropology, University of Cambridge, Downing Street, Cambridge, CB2 3DZ, UK
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31
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Oelze VM, Douglas PH, Stephens CR, Surbeck M, Behringer V, Richards MP, Fruth B, Hohmann G. The Steady State Great Ape? Long Term Isotopic Records Reveal the Effects of Season, Social Rank and Reproductive Status on Bonobo Feeding Behavior. PLoS One 2016; 11:e0162091. [PMID: 27626279 PMCID: PMC5023189 DOI: 10.1371/journal.pone.0162091] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2016] [Accepted: 08/17/2016] [Indexed: 11/18/2022] Open
Abstract
Dietary ecology of extant great apes is known to respond to environmental conditions such as climate and food availability, but also to vary depending on social status and life history characteristics. Bonobos (Pan paniscus) live under comparatively steady ecological conditions in the evergreen rainforests of the Congo Basin. Bonobos are an ideal species for investigating influences of sociodemographic and physiological factors, such as female reproductive status, on diet. We investigate the long term dietary pattern in wild but fully habituated bonobos by stable isotope analysis in hair and integrating a variety of long-term sociodemographic information obtained through observations. We analyzed carbon and nitrogen stable isotopes in 432 hair sections obtained from 101 non-invasively collected hair samples. These samples represented the dietary behavior of 23 adult bonobos from 2008 through 2010. By including isotope and crude protein data from plants we could establish an isotope baseline and interpret the results of several general linear mixed models using the predictors climate, sex, social rank, reproductive state of females, adult age and age of infants. We found that low canopy foliage is a useful isotopic tracer for tropical rainforest settings, and consumption of terrestrial herbs best explains the temporal isotope patterns we found in carbon isotope values of bonobo hair. Only the diet of male bonobos was affected by social rank, with lower nitrogen isotope values in low-ranking young males. Female isotope values mainly differed between different stages of reproduction (cycling, pregnancy, lactation). These isotopic differences appear to be related to changes in dietary preference during pregnancy (high protein diet) and lactation (high energy diet), which allow to compensate for different nutritional needs during maternal investment.
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Affiliation(s)
- Vicky M. Oelze
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Leipzig, Saxony, Germany
- iDiv – German Centre for Integrative Biodiversity Research, Leipzig, Saxony, Germany
| | - Pamela Heidi Douglas
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Leipzig, Saxony, Germany
| | - Colleen R. Stephens
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Leipzig, Saxony, Germany
| | - Martin Surbeck
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Leipzig, Saxony, Germany
| | - Verena Behringer
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Leipzig, Saxony, Germany
| | - Michael P. Richards
- Max Planck Institute for Evolutionary Anthropology, Department of Human Evolution, Leipzig, Saxony, Germany
- Department of Anthropology, University of British Columbia, Vancouver, British Columbia, Canada
| | - Barbara Fruth
- Division of Neurobiology, Ludwig-Maximilians University Munich, Bavaria, Germany
- Centre for Research and Conservation, Royal Zoological Society of Antwerp, Antwerp, Flanders, Belgium
| | - Gottfried Hohmann
- Max Planck Institute for Evolutionary Anthropology, Department of Primatology, Leipzig, Saxony, Germany
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Crowley BE, Reitsema LJ, Oelze VM, Sponheimer M. Advances in primate stable isotope ecology-Achievements and future prospects. Am J Primatol 2015; 78:995-1003. [PMID: 26683892 DOI: 10.1002/ajp.22510] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2015] [Revised: 11/24/2015] [Accepted: 11/25/2015] [Indexed: 12/28/2022]
Abstract
Stable isotope biogeochemistry has been used to investigate foraging ecology in non-human primates for nearly 30 years. Whereas early studies focused on diet, more recently, isotopic analysis has been used to address a diversity of ecological questions ranging from niche partitioning to nutritional status to variability in life history traits. With this increasing array of applications, stable isotope analysis stands to make major contributions to our understanding of primate behavior and biology. Most notably, isotopic data provide novel insights into primate feeding behaviors that may not otherwise be detectable. This special issue brings together some of the recent advances in this relatively new field. In this introduction to the special issue, we review the state of isotopic applications in primatology and its origins and describe some developing methodological issues, including techniques for analyzing different tissue types, statistical approaches, and isotopic baselines. We then discuss the future directions we envision for the field of primate isotope ecology. Am. J. Primatol. 78:995-1003, 2016. © 2015 Wiley Periodicals, Inc.
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Affiliation(s)
- Brooke E Crowley
- Departments of Geology and Anthropology, University of Cincinnati, Cincinnati, Ohio.
| | | | - Vicky M Oelze
- Department of Primatology, Max Planck Institute for Evolutionary Anthropology, Leipzig, Germany
| | - Matt Sponheimer
- Department of Anthropology, University of Colorado, Boulder, Colorado
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Reitsema LJ. Laboratory and field methods for stable isotope analysis in human biology. Am J Hum Biol 2015. [DOI: 10.1002/ajhb.22754] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
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Robb G, Woodborne S, de Bruin P, Medger K, Bennett N. The influence of food quantity on carbon and nitrogen stable isotope values in southern African spiny mice (Acomys spinosissimus). CAN J ZOOL 2015. [DOI: 10.1139/cjz-2014-0134] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Stable isotope analysis is frequently applied as a tool to examine dietary patterns in animals. However, some of the underlying assumptions associated with using this approach are increasingly being questioned. We carried out a controlled diet experiment on the southern African spiny mouse (Acomys spinosissimus Peters, 1852) to test a number of aspects relating to these assumptions and also examine the hypothesis that stable isotopes, especially δ15N, can be used to provide evidence of nutritional stress. We compared the δ13C and δ15N values of livers and blood from animals that were fed ad libitum with animals undergoing a 10% reduction in food supply. Food-restricted animals showed no significant difference in δ15N; however, δ13C values of both liver and blood were depleted. Restricted animals also had a significantly lower C:N ratio. We examined the role of lipids and found following lipid extraction that both livers and lipids still showed the same separation in carbon values. Tissue–diet discrimination values were also calculated and found to be higher for both Δ13C and Δ15N compared with other mice species. Empirical values for discrimination rates were then compared with values calculated using an alternative method based on employing generic values and were found to be dissimilar, suggesting the use of generic values are not always appropriate. Our results highlight the need for greater understanding of the assumptions associated with using stable isotope analysis to examine diet and we suggest that studying a single species under captive conditions presents an ideal method to begin to test these hypotheses.
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Affiliation(s)
- G.N. Robb
- Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - S. Woodborne
- Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
- iThemba LABS, Private Bag 11, WITS 2050, Gauteng, South Africa
| | - P.R. de Bruin
- Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - K. Medger
- Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
| | - N.C. Bennett
- Department of Zoology and Entomology, University of Pretoria, Pretoria, South Africa
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Reitsema LJ, Muir AB. Growth velocity and weaning δ15N “Dips” during ontogeny inMacaca mulatta. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2015; 157:347-57. [DOI: 10.1002/ajpa.22713] [Citation(s) in RCA: 22] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2014] [Revised: 01/24/2015] [Accepted: 01/26/2015] [Indexed: 11/05/2022]
Affiliation(s)
| | - Andrew B. Muir
- Department of Pediatrics; Emory University; Atlanta Georgia 30322
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36
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Tsutaya T, Yoneda M. Reconstruction of breastfeeding and weaning practices using stable isotope and trace element analyses: A review. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2014; 156 Suppl 59:2-21. [DOI: 10.1002/ajpa.22657] [Citation(s) in RCA: 138] [Impact Index Per Article: 13.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2014] [Accepted: 10/17/2014] [Indexed: 01/09/2023]
Affiliation(s)
- Takumi Tsutaya
- Department of Integrated Biosciences; Graduate School of Frontier Sciences, The University of Tokyo; Kashiwanoha 5-1-5 Kashiwa Chiba 277-8562 Japan
| | - Minoru Yoneda
- Department of Integrated Biosciences; Graduate School of Frontier Sciences, The University of Tokyo; Kashiwanoha 5-1-5 Kashiwa Chiba 277-8562 Japan
- The University Museum, The University of Tokyo; Hongo 7-3-1 Bunkyo Tokyo 113-0033 Japan
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Poupin N, Mariotti F, Huneau JF, Hermier D, Fouillet H. Natural isotopic signatures of variations in body nitrogen fluxes: a compartmental model analysis. PLoS Comput Biol 2014; 10:e1003865. [PMID: 25275306 PMCID: PMC4183419 DOI: 10.1371/journal.pcbi.1003865] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2014] [Accepted: 08/19/2014] [Indexed: 11/18/2022] Open
Abstract
Body tissues are generally 15N-enriched over the diet, with a discrimination factor (Δ15N) that varies among tissues and individuals as a function of their nutritional and physiopathological condition. However, both 15N bioaccumulation and intra- and inter-individual Δ15N variations are still poorly understood, so that theoretical models are required to understand their underlying mechanisms. Using experimental Δ15N measurements in rats, we developed a multi-compartmental model that provides the first detailed representation of the complex functioning of the body's Δ15N system, by explicitly linking the sizes and Δ15N values of 21 nitrogen pools to the rates and isotope effects of 49 nitrogen metabolic fluxes. We have shown that (i) besides urea production, several metabolic pathways (e.g., protein synthesis, amino acid intracellular metabolism, urea recycling and intestinal absorption or secretion) are most probably associated with isotope fractionation and together contribute to 15N accumulation in tissues, (ii) the Δ15N of a tissue at steady-state is not affected by variations of its P turnover rate, but can vary according to the relative orientation of tissue free amino acids towards oxidation vs. protein synthesis, (iii) at the whole-body level, Δ15N variations result from variations in the body partitioning of nitrogen fluxes (e.g., urea production, urea recycling and amino acid exchanges), with or without changes in nitrogen balance, (iv) any deviation from the optimal amino acid intake, in terms of both quality and quantity, causes a global rise in tissue Δ15N, and (v) Δ15N variations differ between tissues depending on the metabolic changes involved, which can therefore be identified using simultaneous multi-tissue Δ15N measurements. This work provides proof of concept that Δ15N measurements constitute a new promising tool to investigate how metabolic fluxes are nutritionally or physiopathologically reorganized or altered. The existence of such natural and interpretable isotopic biomarkers promises interesting applications in nutrition and health. Body proteins ensure vital functions, and their constancy is maintained through the tight coordination of many nitrogen metabolic fluxes, but our understanding of how this flux system is regulated, and sometimes dysregulated, remains fragmentary and incomplete. Besides, body tissues are generally naturally enriched in the heavier stable nitrogen isotope (15N) over the diet: this 15N bioaccumulation (Δ15N) varies depending on tissues and metabolic orientations, likely as the result of isotope effects associated to some metabolic pathways. We used a novel approach, combining multi-tissue Δ15N measurements and their analysis using modeling, to understand how body Δ15N values relate to nitrogen fluxes. The multi-tissue model we have developed provides a clearer understanding of the metabolic processes that generate isotopic fractionation, and of how tissue Δ15N values are modulated in response to changes in the body distribution of specific nitrogen fluxes. We show that Δ15N values tend to rise when the amino acids intake does not optimally fit the metabolic demand, and that Δ15N values constitute natural and interpretable signatures of nutritionally-induced variations in nitrogen fluxes. This approach constitutes a new promising tool to investigate how nitrogen metabolism is nutritionally or physiopathologically reorganized or altered, and promises interesting applications in many areas (nutrition, pathology, ecology, paleontology, etc).
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Affiliation(s)
- Nathalie Poupin
- INRA, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France; AgroParisTech, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France
| | - François Mariotti
- INRA, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France; AgroParisTech, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France
| | - Jean-François Huneau
- INRA, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France; AgroParisTech, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France
| | - Dominique Hermier
- INRA, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France; AgroParisTech, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France
| | - Hélène Fouillet
- INRA, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France; AgroParisTech, CRNH-IdF, UMR914 Nutrition Physiology and Ingestive Behavior, Paris, France
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Girard-Buttoz C, Heistermann M, Rahmi E, Agil M, Fauzan PA, Engelhardt A. Costs of and Investment in Mate-Guarding in Wild Long-Tailed Macaques ( Macaca fascicularis): Influences of Female Characteristics and Male-Female Social Bonds. INT J PRIMATOL 2014; 35:701-724. [PMID: 25152554 PMCID: PMC4129240 DOI: 10.1007/s10764-014-9775-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2013] [Accepted: 02/21/2014] [Indexed: 11/24/2022]
Abstract
Male primates living in multimale groups tend to direct mate and mate-guarding choices toward females of high reproductive value, i.e., high-ranking, parous females, or females with which they share strong bonds. Little is known, however, about the constraints that may limit male mate-guarding choices (the costs of this behavior) and the influence of the females’ quality on male investment in mate-guarding. We aimed to study the effects of female rank, parity status, and male–female social bond strength on the costs of and investment in mate-guarding by males. We carried out our study during two reproductive seasons on three groups of wild long-tailed macaques in Indonesia. We combined behavioral observations on male locomotion and activity with noninvasive measurements of fecal glucocorticoids (fGC). Males spent less time feeding when mate-guarding nulliparous females than when mate-guarding parous females and tended to have higher fGC levels when mate-guarding low-ranking nulliparous females than when mate-guarding high-ranking nulliparous ones. Evolution should thus favor male choice for high-ranking parous females because such a decision brings benefits at proximate (reduced costs of mate-guarding) and ultimate (higher reproductive value) levels. Further, male investment in mate-guarding was flexible and contingent on female reproductive and social value. Males were more vigilant and more aggressive toward other males when mate-guarding females to which they were strongly bonded and/or high-ranking ones than when mate-guarding other females. Our findings bring a new dimension to the study of mate choice by showing that males not only mate preferentially with high-quality females but may also aim to secure paternity with these females through optimized monopolization.
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Affiliation(s)
- Cédric Girard-Buttoz
- Jr. Research Group Primate Sexual Selection, German Primate Centre, 37077 Göttingen, Germany ; Courant Research Centre Evolution of Social Behaviour, Georg-August University, 37077 Göttingen, Germany
| | | | - Erdiansyah Rahmi
- Faculty of Veterinary Medicine, Syiah Kuala University, Banda Aceh, Indonesia
| | - Muhammad Agil
- Faculty of Veterinary Medicine, Bogor Agricultural University, Bogor, Indonesia
| | - Panji Ahmad Fauzan
- Faculty of Veterinary Medicine, Bogor Agricultural University, Bogor, Indonesia
| | - Antje Engelhardt
- Jr. Research Group Primate Sexual Selection, German Primate Centre, 37077 Göttingen, Germany ; Courant Research Centre Evolution of Social Behaviour, Georg-August University, 37077 Göttingen, Germany
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Reitsema LJ. Beyond diet reconstruction: stable isotope applications to human physiology, health, and nutrition. Am J Hum Biol 2013; 25:445-56. [PMID: 23784719 DOI: 10.1002/ajhb.22398] [Citation(s) in RCA: 95] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2012] [Revised: 02/28/2013] [Accepted: 03/02/2013] [Indexed: 11/05/2022] Open
Abstract
Analysis of stable carbon and nitrogen isotopes from soft or mineralized tissues is a direct and widely-used technique for modeling diets. In addition to its continued role in paleodiet analysis, stable isotope analysis is now contributing to studies of physiology, disease, and nutrition in archaeological and living human populations. In humans and other animals, dietary uptake and distribution of carbon and nitrogen among mineralized and soft tissue is carried out with varying efficiency due to factors of internal biology. Human pathophysiologies may lead to pathology-influenced isotopic fractionation that can be exploited to understand not just skeletal health and diet, but physiological health and nutrition. This study reviews examples from human biology, non-human animal ecology, biomedicine, and bioarchaeology demonstrating how stable isotope analyses are usefully applied to the study of physiological adaptation and adaptability. Suggestions are made for future directions in applying stable isotope analysis to the study of nutritional stress, disease, and growth and development in living and past human populations.
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Affiliation(s)
- Laurie J Reitsema
- Department of Anthropology, University of Georgia, Athens, GA 30602, USA.
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Reitsema LJ. Beyond diet reconstruction: Stable isotope applications to human physiology, health, and nutrition. Am J Hum Biol 2013. [DOI: 10.1002/aajhb.22398] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Affiliation(s)
- Laurie J. Reitsema
- Department of Anthropology; University of Georgia; Athens; Georgia; 30602
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Howcroft R, Eriksson G, Lidén K. Conformity in diversity? Isotopic investigations of infant feeding practices in two iron age populations from Southern Öland, Sweden. AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY 2012; 149:217-30. [PMID: 22826010 DOI: 10.1002/ajpa.22113] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2011] [Accepted: 06/08/2012] [Indexed: 11/08/2022]
Abstract
This article presents the results of a study of infant diet at two Iron Age sites on the island of Öland, Sweden. The cemetery at Bjärby contained a large number of subadults who had survived the earliest years of life, whereas most individuals at Triberga had died by 6 months of age. To investigate whether differences in infant feeding could explain the different mortality rates, the carbon, nitrogen, and sulfur stable isotope ratios of bone and tooth dentin collagen from the two sites were analyzed. Twenty-two samples from Triberga and 102 from Bjärby yielded data that could be included in the carbon and nitrogen analysis. Twelve samples from Triberga and 42 from Bjärby were included in the sulfur analysis. The results for carbon (δ(13) C: Triberga X = -18.8, s.d. = 1.1; Bjärby X = -19.8, s.d. = 0.4), nitrogen (δ(15) N: Triberga X = 12.9, s.d. = 1.5; Bjärby X = 13.4, s.d. = 1.4), and sulfur (δ(34) S: Triberga X = 8.1, s.d. = 1.1; Bjärby X = 5.8, s.d. = 1.3) suggest that diet was broadly similar at both sites and based on terrestrial resources. At Bjärby, females and high-status individuals consumed higher-trophic level protein than other males from early childhood onward. There was some indication that the contribution of marine resources to the diet may also have differed between the sexes at Triberga. No consistent differences in breast milk intake were observed between the two sites, but there was substantial variation at each. This variation may reflect an influence of gender and social status on infant feeding decisions.
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Affiliation(s)
- Rachel Howcroft
- Archaeological Research Laboratory, Department of Archaeology and Classical Studies, Stockholm University, 10691 Stockholm, Sweden.
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Reitsema LJ. Introducing fecal stable isotope analysis in primate weaning studies. Am J Primatol 2012; 74:926-39. [PMID: 22729669 DOI: 10.1002/ajp.22045] [Citation(s) in RCA: 43] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2011] [Revised: 05/13/2012] [Accepted: 05/14/2012] [Indexed: 11/07/2022]
Abstract
This research investigates the potential of a new, noninvasive method for determining age of weaning among primates using stable carbon and nitrogen isotope ratios in feces. Analysis of stable isotope ratios in body tissues is a well-established method in archeology and ecology for reconstructing diet. This is the first study to investigate weaning in primates using fecal stable isotope ratios. Diets of a single François' langur (Trachypithecus francoisi) mother-infant pair at the Toledo Zoo are reconstructed using this technique to track changes in infant suckling behavior over the weaning period. Stable isotope ratios in feces are sampled instead of more traditional samples such as bone or hair to enable daily, noninvasive snapshots of weaning status. Isotopic assessments of weaning status are compared to visual assessments to identify any discordance between the two. Three measurements documented the transition from breast milk to solid foods: stable carbon isotope ratios (δ(13)C), stable nitrogen isotope ratios (δ(15)N), and nitrogen content of feces (%N). It appears that solid foods were introduced at approximately 2 months of infant age, but that nursing continued into the 12th month, when sample collection ceased. Stable isotope data exposed a much longer weaning period than what was expected based on previously published data for captive langurs, and clarified visual estimates of weaning status. This reflects the method's sensitivity to suckling at night and ability to distinguish actual nursing from comfort nursing. After testing this method with zoo animals, it can readily be applied among wild populations. An isotopic approach to weaning provides a new, accurate, and biologically meaningful assessment of interbirth intervals, and facilitates a better understanding of mother-infant interactions. Both of these outcomes are critical for developing successful conservation strategies for captive and wild primates.
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