1
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Ryan A, Rahman S, Williams RM. Optical Aptamer-Based Cytokine Nanosensor Detects Macrophage Activation by Bacterial Toxins. ACS Sens 2024; 9:3697-3706. [PMID: 38934367 PMCID: PMC11287749 DOI: 10.1021/acssensors.4c00887] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2024] [Revised: 06/10/2024] [Accepted: 06/20/2024] [Indexed: 06/28/2024]
Abstract
Overactive or dysregulated cytokine expression is a hallmark of many acute and chronic inflammatory diseases. This is true for acute or chronic infections, neurodegenerative diseases, autoimmune diseases, cardiovascular diseases, cancer, and others. Cytokines such as interleukin-6 (IL-6) are known therapeutic targets and biomarkers for such inflammatory diseases. Platforms for cytokine detection are, therefore, desirable tools for both research and clinical applications. Single-walled carbon nanotubes (SWCNT) are versatile nanomaterials with near-infrared fluorescence that can serve as transducers for optical sensors. When functionalized with an analyte-specific recognition element, SWCNT emission may become sensitive and selective toward the desired target. SWCNT-aptamer sensors are easily assembled, inexpensive, and biocompatible. In this work, we introduced a nanosensor design based on SWCNT and a DNA aptamer specific to IL-6. We first evaluated several SWCNT-aptamer constructs based on this simple direct complexation method, wherein the aptamer both solubilizes the SWCNT and confers sensitivity to IL-6. The sensor limit of detection, 105 ng/mL, lies in the relevant range for pathological IL-6 levels. Upon investigation of sensor kinetics, we found rapid response within seconds of antigen addition which continued over the course of 3 h. We found that this sensor construct is stable and the aptamer is not displaced from the nanotube surface during IL-6 detection. Finally, we investigated the ability of this sensor construct to detect macrophage activation caused by bacterial lipopolysaccharides (LPS) in an in vitro model of disease, finding rapid and sensitive detection of macrophage-expressed IL-6. We are confident that further development of this sensor will have novel implications for diagnosis of acute and chronic inflammatory diseases, in addition to contributing to the understanding of the role of cytokines in these diseases.
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Affiliation(s)
- Amelia
K. Ryan
- Department
of Biomedical Engineering, The City College
of New York, New York, New York 10031, United States
| | - Syeda Rahman
- Department
of Biomedical Engineering, The City College
of New York, New York, New York 10031, United States
| | - Ryan M. Williams
- Department
of Biomedical Engineering, The City College
of New York, New York, New York 10031, United States
- PhD
Program in Chemistry, Graduate Center, City
University of New York, New York, New York 10016, United States
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2
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Basu S, Hendler-Neumark A, Bisker G. Rationally Designed Functionalization of Single-Walled Carbon Nanotubes for Real-Time Monitoring of Cholinesterase Activity and Inhibition in Plasma. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2024; 20:e2309481. [PMID: 38358018 DOI: 10.1002/smll.202309481] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/19/2023] [Revised: 01/25/2024] [Indexed: 02/16/2024]
Abstract
Enzymes play a pivotal role in regulating numerous bodily functions. Thus, there is a growing need for developing sensors enabling real-time monitoring of enzymatic activity and inhibition. The activity and inhibition of cholinesterase (CHE) enzymes in blood plasma are fluorometrically monitored using near-infrared (NIR) fluorescent single-walled carbon nanotubes (SWCNTs) as probes, strategically functionalized with myristoylcholine (MC)- the substrate of CHE. A significant decrease in the fluorescence intensity of MC-suspended SWCNTs upon interaction with CHE is observed, attributed to the hydrolysis of the MC corona phase of the SWCNTs by CHE. Complementary measurements for quantifying choline, the product of MC hydrolysis, reveal a correlation between the fluorescence intensity decrease and the amount of released choline, rendering the SWCNTs optical sensors with real-time feedback in the NIR biologically transparent spectral range. Moreover, when synthetic and naturally abundant inhibitors inhibit the CHE enzymes present in blood plasma, no significant modulations of the MC-SWCNT fluorescence are observed, allowing effective detection of CHE inhibition. The rationally designed SWCNT sensors platform for monitoring of enzymatic activity and inhibition in clinically relevant samples is envisioned to not only advance the field of clinical diagnostics but also deepen further understanding of enzyme-related processes in complex biological fluids.
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Affiliation(s)
- Srestha Basu
- Department of Biomedical Engineering, Faculty of Engineering, Tel Aviv University, Tel Aviv, 6997801, Israel
| | - Adi Hendler-Neumark
- Department of Biomedical Engineering, Faculty of Engineering, Tel Aviv University, Tel Aviv, 6997801, Israel
| | - Gili Bisker
- Department of Biomedical Engineering, Faculty of Engineering, Tel Aviv University, Tel Aviv, 6997801, Israel
- Center for Physics and Chemistry of Living Systems, Tel Aviv University, Tel Aviv, 6997801, Israel
- Center for Nanoscience and Nanotechnology, Tel Aviv University, Tel Aviv, 6997801, Israel
- Center for Light-Matter Interaction, Tel Aviv University, Tel Aviv, 6997801, Israel
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3
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Basu S, Hendler-Neumark A, Bisker G. Monitoring Enzyme Activity Using Near-Infrared Fluorescent Single-Walled Carbon Nanotubes. ACS Sens 2024; 9:2237-2253. [PMID: 38669585 PMCID: PMC11129355 DOI: 10.1021/acssensors.4c00377] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2024] [Revised: 04/03/2024] [Accepted: 04/16/2024] [Indexed: 04/28/2024]
Abstract
Enzymes serve as pivotal biological catalysts that accelerate essential chemical reactions, thereby influencing a variety of physiological processes. Consequently, the monitoring of enzyme activity and inhibition not only yields crucial insights into health and disease conditions but also forms the basis of research in drug discovery, toxicology, and the understanding of disease mechanisms. In this context, near-infrared (NIR) fluorescent single-walled carbon nanotubes (SWCNTs) have emerged as effective tools for tracking enzyme activity and inhibition through diverse strategies. This perspective explores the physicochemical attributes of SWCNTs that render them well-suited for such monitoring. Additionally, we delve into the various strategies developed so far for successfully monitoring enzyme activity and inhibition, emphasizing the distinctive features of each principle. Furthermore, we contrast the benefits of SWCNT-based NIR probes with conventional gold standards in monitoring enzyme activity. Lastly, we highlight the current challenges faced in this field and suggest potential solutions to propel it forward. This perspective aims to contribute to the ongoing progress in biodiagnostics and seeks to engage the wider community in developing and applying enzymatic assays using SWCNTs.
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Affiliation(s)
- Srestha Basu
- Department
of Biomedical Engineering, Faculty of Engineering, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Adi Hendler-Neumark
- Department
of Biomedical Engineering, Faculty of Engineering, Tel Aviv University, Tel Aviv 6997801, Israel
| | - Gili Bisker
- Department
of Biomedical Engineering, Faculty of Engineering, Tel Aviv University, Tel Aviv 6997801, Israel
- Center
for Physics and Chemistry of Living Systems, Tel Aviv University, Tel Aviv 6997801, Israel
- Center
for Nanoscience and Nanotechnology, Tel
Aviv University, Tel Aviv 6997801, Israel
- Center
for Light-Matter Interaction, Tel Aviv University, Tel Aviv 6997801, Israel
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4
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Ryan AK, Rahman S, Williams RM. An optical aptamer-based cytokine nanosensor detects macrophage activation by bacterial toxins. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.04.05.588290. [PMID: 38617274 PMCID: PMC11014583 DOI: 10.1101/2024.04.05.588290] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/16/2024]
Abstract
Overactive or dysregulated cytokine expression is hallmark of many acute and chronic inflammatory diseases. This is true for acute or chronic infection, neurodegenerative diseases, autoimmune diseases, cardiovascular disease, cancer, and others. Cytokines such as interleukin-6 (IL-6) are known therapeutic targets and biomarkers for such inflammatory diseases. Platforms for cytokine detection are therefore desirable tools for both research and clinical applications. Single-walled carbon nanotubes (SWCNT) are versatile nanomaterials with near-infrared fluorescence that can serve as transducers for optical sensors. When functionalized with an analyte-specific recognition element, SWCNT emission may become sensitive and selective towards the desired target. SWCNT-aptamer sensors are easily assembled, inexpensive, and biocompatible. In this work, we introduced a nanosensor design based on SWCNT and a DNA aptamer specific to IL-6. We first evaluated several SWCNT-aptamer constructs based on this simple direct complexation method, wherein the aptamer both solubilizes the SWCNT and confers sensitivity to IL-6. The sensor limit of detection, 105 ng/mL, lies in the relevant range for pathological IL-6 levels. Upon investigation of sensor kinetics, we found rapid response within seconds of antigen addition which continued over the course of three hours. We found that this sensor construct is stable, and the aptamer is not displaced from the nanotube surface during IL-6 detection. Finally, we investigated the ability of this sensor construct to detect macrophage activation caused by bacterial lipopolysaccharides (LPS) in an in vitro model of disease, finding rapid and sensitive detection of macrophage-expressed IL-6. We are confident further development of this sensor will have novel implications for diagnosis of acute and chronic inflammatory diseases, in addition to contributing to the understanding of the role of cytokines in these diseases.
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Affiliation(s)
- Amelia K. Ryan
- The City College of New York, Department of Biomedical Engineering, New York, NY 10031
| | - Syeda Rahman
- The City College of New York, Department of Biomedical Engineering, New York, NY 10031
| | - Ryan M. Williams
- The City College of New York, Department of Biomedical Engineering, New York, NY 10031
- PhD Program in Chemistry, Graduate Center, City University of New York, New York, NY 10016
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5
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Krasley A, Li E, Galeana JM, Bulumulla C, Beyene AG, Demirer GS. Carbon Nanomaterial Fluorescent Probes and Their Biological Applications. Chem Rev 2024; 124:3085-3185. [PMID: 38478064 PMCID: PMC10979413 DOI: 10.1021/acs.chemrev.3c00581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Revised: 02/01/2024] [Accepted: 02/09/2024] [Indexed: 03/28/2024]
Abstract
Fluorescent carbon nanomaterials have broadly useful chemical and photophysical attributes that are conducive to applications in biology. In this review, we focus on materials whose photophysics allow for the use of these materials in biomedical and environmental applications, with emphasis on imaging, biosensing, and cargo delivery. The review focuses primarily on graphitic carbon nanomaterials including graphene and its derivatives, carbon nanotubes, as well as carbon dots and carbon nanohoops. Recent advances in and future prospects of these fields are discussed at depth, and where appropriate, references to reviews pertaining to older literature are provided.
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Affiliation(s)
- Andrew
T. Krasley
- Janelia
Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, Virginia 20147, United States
| | - Eugene Li
- Division
of Chemistry and Chemical Engineering, California
Institute of Technology, 1200 E. California Boulevard, Pasadena, California 91125, United States
| | - Jesus M. Galeana
- Division
of Chemistry and Chemical Engineering, California
Institute of Technology, 1200 E. California Boulevard, Pasadena, California 91125, United States
| | - Chandima Bulumulla
- Janelia
Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, Virginia 20147, United States
| | - Abraham G. Beyene
- Janelia
Research Campus, Howard Hughes Medical Institute, 19700 Helix Drive, Ashburn, Virginia 20147, United States
| | - Gozde S. Demirer
- Division
of Chemistry and Chemical Engineering, California
Institute of Technology, 1200 E. California Boulevard, Pasadena, California 91125, United States
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6
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Nishitani S, Tran T, Puglise A, Yang S, Landry MP. Engineered Glucose Oxidase-Carbon Nanotube Conjugates for Tissue-Translatable Glucose Nanosensors. Angew Chem Int Ed Engl 2024; 63:e202311476. [PMID: 37990059 PMCID: PMC11003487 DOI: 10.1002/anie.202311476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2023] [Revised: 10/22/2023] [Accepted: 11/21/2023] [Indexed: 11/23/2023]
Abstract
Continuous and non-invasive glucose monitoring and imaging is important for disease diagnosis, treatment, and management. However, glucose monitoring remains a technical challenge owing to the dearth of tissue-transparent glucose sensors. In this study, we present the development of near-infrared fluorescent single-walled carbon nanotube (SWCNT) based nanosensors directly functionalized with glucose oxidase (GOx) capable of immediate and reversible glucose imaging in biological fluids and tissues. We prepared GOx-SWCNT nanosensors by facile sonication of SWCNT with GOx in a manner that-surprisingly-does not compromise the ability of GOx to detect glucose. Importantly, we find by using denatured GOx that the fluorescence modulation of GOx-SWCNT is not associated with the catalytic oxidation of glucose but rather triggered by glucose-GOx binding. Leveraging the unique response mechanism of GOx-SWCNT nanosensors, we developed catalytically inactive apo-GOx-SWCNT that enables both sensitive and reversible glucose imaging, exhibiting a ΔF/F0 of up to 40 % within 1 s of exposure to glucose without consuming the glucose analyte. We finally demonstrate the potential applicability of apo-GOx-SWCNT in biomedical applications by glucose quantification in human plasma and glucose imaging in mouse brain slices.
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Affiliation(s)
- Shoichi Nishitani
- Department of Chemical and Biomolecular Engineering, University of California, 94720, Berkeley, CA, USA
| | - Tiffany Tran
- Department of Chemical and Biomolecular Engineering, University of California, 94720, Berkeley, CA, USA
| | - Andrew Puglise
- Department of Chemical and Biomolecular Engineering, University of California, 94720, Berkeley, CA, USA
| | - Sounghyun Yang
- Department of Chemical and Biomolecular Engineering, University of California, 94720, Berkeley, CA, USA
| | - Markita P Landry
- Department of Chemical and Biomolecular Engineering, University of California, 94720, Berkeley, CA, USA
- Innovative Genomics Institute (IGI), 94720, Berkeley, CA, USA
- California Institute for Quantitative Biosciences, QB3, University of California, 94720, Berkeley, CA, USA
- Chan-Zuckerberg Biohub, 94158, San Francisco, CA, USA
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7
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Yin Y, Zhang T, Feng L, Ran J, Ma C, Tan Y, Song W, Yang B. Growth of nanostructured Cu 3Al alloy films by magnetron sputtering for non-enzymatic glucose-sensing applications. RSC Adv 2023; 13:14641-14650. [PMID: 37215753 PMCID: PMC10198095 DOI: 10.1039/d3ra02076b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Accepted: 05/01/2023] [Indexed: 05/24/2023] Open
Abstract
Enzymatic glucose sensors usually exhibit excellent sensitivity and selectivity but suffer from poor stability due to the negative influence of temperature and humidity on enzyme molecules. As compared to enzymatic glucose sensors, non-enzymatic counterparts are generally more stable but are facing challenges in concurrently improving both sensitivity and selectivity of a trace amount of glucose molecules in physiological samples such as saliva and sweat. Here, a novel non-enzymatic glucose sensor based on nanostructured Cu3Al alloy films has been fabricated by a facile magnetron-sputtering followed by controllable electrochemical etching approach. Since the metal Al is more reductive than Cu, by selectively etching aluminum in the Cu3Al alloys, nanostructured alloy films were obtained with increased surface contact area and electrocatalytic active sites which resulted in enhanced glucose-sensing performance. Thus, non-enzymatic glucose sensors based on nanostructured Cu3Al alloy films not only exhibited a high sensitivity of 1680 μA mM-1 cm-2 but also achieved a reliable selectivity to glucose without interference by other species in physiological samples. Consequently, this study sparked the potential for the development of non-enzymatic biosensors for the continuous monitoring of blood glucose levels with high sensitivity and impressive selectivity for glucose molecules.
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Affiliation(s)
- Yuqing Yin
- College of Materials Science and Engineering, Hunan University Changsha 410082 China
| | - Ting Zhang
- College of Materials Science and Engineering, Hunan University Changsha 410082 China
| | - Lemeng Feng
- Xiangya Hospital of Central South University Changsha 410008 China
| | - Junhui Ran
- College of Materials Science and Engineering, Hunan University Changsha 410082 China
| | - Chao Ma
- College of Materials Science and Engineering, Hunan University Changsha 410082 China
| | - Yongwen Tan
- College of Materials Science and Engineering, Hunan University Changsha 410082 China
| | - Weitao Song
- Xiangya Hospital of Central South University Changsha 410008 China
| | - Bin Yang
- College of Materials Science and Engineering, Hunan University Changsha 410082 China
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8
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Ackermann J, Stegemann J, Smola T, Reger E, Jung S, Schmitz A, Herbertz S, Erpenbeck L, Seidl K, Kruss S. High Sensitivity Near-Infrared Imaging of Fluorescent Nanosensors. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023; 19:e2206856. [PMID: 36610045 DOI: 10.1002/smll.202206856] [Citation(s) in RCA: 13] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2022] [Revised: 11/27/2022] [Indexed: 06/17/2023]
Abstract
Biochemical processes are fast and occur on small-length scales, which makes them difficult to measure. Optical nanosensors based on single-wall carbon nanotubes (SWCNTs) are able to capture such dynamics. They fluoresce in the near-infrared (NIR, 850-1700 nm) tissue transparency window and the emission wavelength depends on their chirality. However, NIR imaging requires specialized indium gallium arsenide (InGaAs) cameras with a typically low resolution because the quantum yield of normal Si-based cameras rapidly decreases in the NIR. Here, an efficient one-step phase separation approach to isolate monochiral (6,4)-SWCNTs (880 nm emission) from mixed SWCNT samples is developed. It enables imaging them in the NIR with high-resolution standard Si-based cameras (>50× more pixels). (6,4)-SWCNTs modified with (GT)10 -ssDNA become highly sensitive to the important neurotransmitter dopamine. These sensors are 1.7× brighter and 7.5× more sensitive and allow fast imaging (<50 ms). They enable high-resolution imaging of dopamine release from cells. Thus, the assembly of biosensors from (6,4)-SWCNTs combines the advantages of nanosensors working in the NIR with the sensitivity of (Si-based) cameras and enables broad usage of these nanomaterials.
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Affiliation(s)
- Julia Ackermann
- Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
- Department EBS, University Duisburg-Essen, Bismarkstrasse 81, 47057, Duisburg, Germany
| | - Jan Stegemann
- Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
- Department of Chemistry, Ruhr-University Bochum, Universitätsstrasse 150, 44801, Bochum, Germany
| | - Tim Smola
- Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
- Department EBS, University Duisburg-Essen, Bismarkstrasse 81, 47057, Duisburg, Germany
| | - Eline Reger
- Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
- Department EBS, University Duisburg-Essen, Bismarkstrasse 81, 47057, Duisburg, Germany
| | - Sebastian Jung
- ZEMOS Center for Solvation Science, Ruhr-University Bochum, Universitätsstrasse 150, 44801, Bochum, Germany
| | - Anne Schmitz
- Department of Dermatology, University Hospital Münster, Von-Esmarch-Strasse 58, 48149, Münster, Germany
| | - Svenja Herbertz
- Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
| | - Luise Erpenbeck
- Department of Dermatology, University Hospital Münster, Von-Esmarch-Strasse 58, 48149, Münster, Germany
| | - Karsten Seidl
- Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
- Department EBS, University Duisburg-Essen, Bismarkstrasse 81, 47057, Duisburg, Germany
- Center for Nanointegration Duisburg-Essen (CENIDE), Carl-Benz-Strasse 199, 47057, Duisburg, Germany
| | - Sebastian Kruss
- Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
- Department of Chemistry, Ruhr-University Bochum, Universitätsstrasse 150, 44801, Bochum, Germany
- Center for Nanointegration Duisburg-Essen (CENIDE), Carl-Benz-Strasse 199, 47057, Duisburg, Germany
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9
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Wang H, Boghossian AA. Covalent conjugation of proteins onto fluorescent single-walled carbon nanotubes for biological and medical applications. MATERIALS ADVANCES 2023; 4:823-834. [PMID: 36761250 PMCID: PMC9900427 DOI: 10.1039/d2ma00714b] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2022] [Accepted: 11/02/2022] [Indexed: 05/20/2023]
Abstract
Single-walled carbon nanotubes (SWCNTs) have optical properties that are conducive for biological applications such as sensing, delivery, and imaging. These applications necessitate the immobilization of macromolecules that can serve as therapeutic drugs, molecular templates, or modulators of surface interactions. Although previous studies have focused on non-covalent immobilization strategies, recent advances have introduced covalent functional handles that can preserve or even enhance the SWCNT optical properties. This review presents an overview of covalent sidewall modifications of SWCNTs, with a focus on the latest generation of "sp3 defect" modifications. We summarize and compare the reaction conditions and the reported products of these sp3 chemistries. We further review the underlying photophysics governing SWCNT fluorescence and apply these principles to the fluorescence emitted from these covalently modified SWCNTs. Finally, we provide an outlook on additional chemistries that could be applied to covalently conjugate proteins to these chemically modified, fluorescent SWCNTs. We review the advantages of these approaches, emerging opportunities for further improvement, as well as their implications for enabling new technologies.
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Affiliation(s)
- Hanxuan Wang
- Ecole Polytechnique Fédérale de Lausanne (EPFL), Institute of Chemical Sciences and Engineering CH-1015 Lausanne Switzerland
| | - Ardemis A Boghossian
- Ecole Polytechnique Fédérale de Lausanne (EPFL), Institute of Chemical Sciences and Engineering CH-1015 Lausanne Switzerland
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10
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Antonucci A, Reggente M, Roullier C, Gillen AJ, Schuergers N, Zubkovs V, Lambert BP, Mouhib M, Carata E, Dini L, Boghossian AA. Carbon nanotube uptake in cyanobacteria for near-infrared imaging and enhanced bioelectricity generation in living photovoltaics. NATURE NANOTECHNOLOGY 2022; 17:1111-1119. [PMID: 36097045 DOI: 10.1038/s41565-022-01198-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Accepted: 07/20/2022] [Indexed: 06/15/2023]
Abstract
The distinctive properties of single-walled carbon nanotubes (SWCNTs) have inspired the development of many novel applications in the field of cell nanobiotechnology. However, studies thus far have not explored the effect of SWCNT functionalization on transport across the cell walls of prokaryotes. We explore the uptake of SWCNTs in Gram-negative cyanobacteria and demonstrate a passive length-dependent and selective internalization of SWCNTs decorated with positively charged biomolecules. We show that lysozyme-coated SWCNTs spontaneously penetrate the cell walls of a unicellular strain and a multicellular strain. A custom-built spinning-disc confocal microscope was used to image the distinct near-infrared SWCNT fluorescence within the autofluorescent cells, revealing a highly inhomogeneous distribution of SWCNTs. Real-time near-infrared monitoring of cell growth and division reveal that the SWCNTs are inherited by daughter cells. Moreover, these nanobionic living cells retained photosynthetic activity and showed an improved photo-exoelectrogenicity when incorporated into bioelectrochemical devices.
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Affiliation(s)
- Alessandra Antonucci
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Melania Reggente
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Charlotte Roullier
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Alice J Gillen
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Nils Schuergers
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
- Institute of Biology III, University of Freiburg, Freiburg, Germany
| | - Vitalijs Zubkovs
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
- Swiss Center for Electronics and Microtechnology (CSEM), Landquart, Switzerland
| | - Benjamin P Lambert
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Mohammed Mouhib
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Elisabetta Carata
- Department of Biological and Environmental Sciences and Technologies (DiSTeBA), University of Salento, Lecce, Italy
| | - Luciana Dini
- Department of Biology and Biotechnology Charles Darwin, Sapienza University of Rome, CNR Nanotec, Lecce, Italy
| | - Ardemis A Boghossian
- Institute of Chemical Sciences and Engineering (ISIC), Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
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11
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Halicka K, Meloni F, Czok M, Spychalska K, Baluta S, Malecha K, Pilo MI, Cabaj J. New Trends in Fluorescent Nanomaterials-Based Bio/Chemical Sensors for Neurohormones Detection-A Review. ACS OMEGA 2022; 7:33749-33768. [PMID: 36188279 PMCID: PMC9520559 DOI: 10.1021/acsomega.2c04134] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Accepted: 09/05/2022] [Indexed: 06/16/2023]
Abstract
The study of neurotransmitters and stress hormones allows the determination of indicators of the current stress load in the body. These species also create a proper strategy of stress protection. Nowadays, stress is a general factor that affects the population, and it may cause a wide range of serious disorders. Abnormalities in the level of neurohormones, caused by chronic psychological stress, can occur in, for instance, corporate employees, health care workers, shift workers, policemen, or firefighters. Here we present a new nanomaterials-based sensors technology development for the determination of neurohormones. We focus on fluorescent sensors/biosensors that utilize nanomaterials, such as quantum dots or carbon nanomaterials. Nanomaterials, owing to their diversity in size and shape, have been attracting increasing attention in sensing or bioimaging. They possess unique properties, such as fluorescent, electronic, or photoluminescent features. In this Review, we summarize new trends in adopting nanomaterials for applications in fluorescent sensors for neurohormone monitoring.
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Affiliation(s)
- Kinga Halicka
- Faculty
of Chemistry and Faculty of Microsystem Electronics and Photonics, Wroclaw University of Science and Technology, Wybrzeze Wyspianskiego 27, 50-370 Wroclaw, Poland
| | - Francesca Meloni
- Department
of Chemistry and Pharmacy, University of
Sassari, Via Vienna 2, 07100 Sassari, Italy
| | - Mateusz Czok
- Faculty
of Chemistry and Faculty of Microsystem Electronics and Photonics, Wroclaw University of Science and Technology, Wybrzeze Wyspianskiego 27, 50-370 Wroclaw, Poland
| | - Kamila Spychalska
- Faculty
of Chemistry and Faculty of Microsystem Electronics and Photonics, Wroclaw University of Science and Technology, Wybrzeze Wyspianskiego 27, 50-370 Wroclaw, Poland
| | - Sylwia Baluta
- Faculty
of Chemistry and Faculty of Microsystem Electronics and Photonics, Wroclaw University of Science and Technology, Wybrzeze Wyspianskiego 27, 50-370 Wroclaw, Poland
| | - Karol Malecha
- Faculty
of Chemistry and Faculty of Microsystem Electronics and Photonics, Wroclaw University of Science and Technology, Wybrzeze Wyspianskiego 27, 50-370 Wroclaw, Poland
| | - Maria I. Pilo
- Department
of Chemistry and Pharmacy, University of
Sassari, Via Vienna 2, 07100 Sassari, Italy
| | - Joanna Cabaj
- Faculty
of Chemistry and Faculty of Microsystem Electronics and Photonics, Wroclaw University of Science and Technology, Wybrzeze Wyspianskiego 27, 50-370 Wroclaw, Poland
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12
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Safdar M, Kim W, Park S, Gwon Y, Kim YO, Kim J. Engineering plants with carbon nanotubes: a sustainable agriculture approach. J Nanobiotechnology 2022; 20:275. [PMID: 35701848 PMCID: PMC9195285 DOI: 10.1186/s12951-022-01483-w] [Citation(s) in RCA: 19] [Impact Index Per Article: 9.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Accepted: 05/25/2022] [Indexed: 01/12/2023] Open
Abstract
Sustainable agriculture is an important conception to meet the growing food demand of the global population. The increased need for adequate and safe food, as well as the ongoing ecological destruction associated with conventional agriculture practices are key global challenges. Nanomaterials are being developed in the agriculture sector to improve the growth and protection of crops. Among the various engineered nanomaterials, carbon nanotubes (CNTs) are one of the most promising carbon-based nanomaterials owing to their attractive physiochemical properties such as small size, high surface area, and superior mechanical and thermal strength, offering better opportunities for agriculture sector applications. This review provides basic information about CNTs, including their history; classification; and electrical, thermal, and mechanical properties, with a focus on their applications in the agriculture field. Furthermore, the mechanisms of the uptake and translocation of CNTs in plants and their defense mechanisms against environmental stresses are discussed. Finally, the major shortcomings, threats, and challenges of CNTs are assessed to provide a broad and clear view of the potential and future directions for CNT-based agriculture applications to achieve the goal of sustainability.
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Affiliation(s)
- Mahpara Safdar
- Department of Convergence Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea.,Department of Rural and Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea.,Interdisciplinary Program in IT-Bio Convergence System, Chonnam National University, Gwangju, 61186, Republic of Korea
| | - Woochan Kim
- Department of Convergence Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea.,Department of Rural and Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea.,Interdisciplinary Program in IT-Bio Convergence System, Chonnam National University, Gwangju, 61186, Republic of Korea
| | - Sunho Park
- Department of Convergence Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea.,Department of Rural and Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea.,Interdisciplinary Program in IT-Bio Convergence System, Chonnam National University, Gwangju, 61186, Republic of Korea
| | - Yonghyun Gwon
- Department of Convergence Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea.,Department of Rural and Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea.,Interdisciplinary Program in IT-Bio Convergence System, Chonnam National University, Gwangju, 61186, Republic of Korea
| | - Yeon-Ok Kim
- Interdisciplinary Program in IT-Bio Convergence System, Chonnam National University, Gwangju, 61186, Republic of Korea.
| | - Jangho Kim
- Department of Convergence Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea. .,Department of Rural and Biosystems Engineering, Chonnam National University, Gwangju, 61186, Republic of Korea. .,Interdisciplinary Program in IT-Bio Convergence System, Chonnam National University, Gwangju, 61186, Republic of Korea.
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13
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Zubkovs V, Wang H, Schuergers N, Weninger A, Glieder A, Cattaneo S, Boghossian AA. Bioengineering a glucose oxidase nanosensor for near-infrared continuous glucose monitoring. NANOSCALE ADVANCES 2022; 4:2420-2427. [PMID: 35746900 PMCID: PMC9154020 DOI: 10.1039/d2na00092j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Accepted: 04/30/2022] [Indexed: 05/14/2023]
Abstract
Single-walled carbon nanotubes (SWCNTs) emit photostable near-infrared (NIR) fluorescence that is conducive for optical glucose monitoring. Such SWCNT-based optical sensors often require the immobilization of proteins that can confer glucose selectivity and reactivity. In this work, we immobilize a glucose-reactive enzyme, glucose oxidase (GOx), onto SWCNTs using a N-(1-pyrenyl)maleimide (PM) crosslinker via thiol bioconjugation of engineered cysteine residues. We compare the conjugation of several glucose oxidase variants containing rationally-engineered cysteines and identify a D70C variant that shows effective bioconjugation. The bioconjugation was characterized through both absorption and fluorescence spectroscopy. Furthermore, we demonstrate an application for continuous glucose monitoring in the NIR-II optical region using the bioconjugated reaction solution, which shows a reversible response to physiological concentrations of glucose. Finally, we develop a miniaturized NIR-II reader to be used for cell cultures that require continuous glucose monitoring.
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Affiliation(s)
- Vitalijs Zubkovs
- Ecole Polytechnique Fédérale de Lausanne (EPFL), Institute of Chemical Sciences and Engineering CH-1015 Lausanne Switzerland
- Swiss Center for Electronics and Microtechnology (CSEM) Landquart Switzerland
| | - Hanxuan Wang
- Ecole Polytechnique Fédérale de Lausanne (EPFL), Institute of Chemical Sciences and Engineering CH-1015 Lausanne Switzerland
| | - Nils Schuergers
- Ecole Polytechnique Fédérale de Lausanne (EPFL), Institute of Chemical Sciences and Engineering CH-1015 Lausanne Switzerland
- Institute of Biology III, University of Freiburg Freiburg Germany
| | - Astrid Weninger
- Institute of Molecular Biotechnology, Graz University of Technology Graz Austria
| | - Anton Glieder
- Institute of Molecular Biotechnology, Graz University of Technology Graz Austria
- bisy GmbH Hofstaetten Austria
| | - Stefano Cattaneo
- Swiss Center for Electronics and Microtechnology (CSEM) Landquart Switzerland
| | - Ardemis A Boghossian
- Ecole Polytechnique Fédérale de Lausanne (EPFL), Institute of Chemical Sciences and Engineering CH-1015 Lausanne Switzerland
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14
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Ackermann J, Metternich JT, Herbertz S, Kruss S. Biosensing with Fluorescent Carbon Nanotubes. Angew Chem Int Ed Engl 2022; 61:e202112372. [PMID: 34978752 PMCID: PMC9313876 DOI: 10.1002/anie.202112372] [Citation(s) in RCA: 69] [Impact Index Per Article: 34.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2021] [Revised: 12/28/2021] [Indexed: 12/23/2022]
Abstract
Biosensors are powerful tools for modern basic research and biomedical diagnostics. Their development requires substantial input from the chemical sciences. Sensors or probes with an optical readout, such as fluorescence, offer rapid, minimally invasive sensing of analytes with high spatial and temporal resolution. The near‐infrared (NIR) region is beneficial because of the reduced background and scattering of biological samples (tissue transparency window) in this range. In this context, single‐walled carbon nanotubes (SWCNTs) have emerged as versatile NIR fluorescent building blocks for biosensors. Here, we provide an overview of advances in SWCNT‐based NIR fluorescent molecular sensors. We focus on chemical design strategies for diverse analytes and summarize insights into the photophysics and molecular recognition. Furthermore, different application areas are discussed—from chemical imaging of cellular systems and diagnostics to in vivo applications and perspectives for the future.
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Affiliation(s)
- Julia Ackermann
- Biomedical Nanosensors, Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany.,Department EBS, University Duisburg-Essen, Bismarckstrasse 81, 47057, Duisburg, Germany
| | - Justus T Metternich
- Physical Chemistry, Ruhr-University Bochum, Universitätsstrasse 150, 44801, Bochum, Germany.,Biomedical Nanosensors, Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
| | - Svenja Herbertz
- Biomedical Nanosensors, Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
| | - Sebastian Kruss
- Physical Chemistry, Ruhr-University Bochum, Universitätsstrasse 150, 44801, Bochum, Germany.,Biomedical Nanosensors, Fraunhofer Institute for Microelectronic Circuits and Systems, Finkenstrasse 61, 47057, Duisburg, Germany
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15
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Ackermann J, Metternich JT, Herbertz S, Kruss S. Biosensing with Fluorescent Carbon Nanotubes. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202112372] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
- Julia Ackermann
- Biomedical Nanosensors Fraunhofer Institute for Microelectronic Circuits and Systems Finkenstrasse 61 47057 Duisburg Germany
- Department EBS University Duisburg-Essen Bismarckstrasse 81 47057 Duisburg Germany
| | - Justus T. Metternich
- Physical Chemistry Ruhr-University Bochum Universitätsstrasse 150 44801 Bochum Germany
- Biomedical Nanosensors Fraunhofer Institute for Microelectronic Circuits and Systems Finkenstrasse 61 47057 Duisburg Germany
| | - Svenja Herbertz
- Biomedical Nanosensors Fraunhofer Institute for Microelectronic Circuits and Systems Finkenstrasse 61 47057 Duisburg Germany
| | - Sebastian Kruss
- Physical Chemistry Ruhr-University Bochum Universitätsstrasse 150 44801 Bochum Germany
- Biomedical Nanosensors Fraunhofer Institute for Microelectronic Circuits and Systems Finkenstrasse 61 47057 Duisburg Germany
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16
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Khosravi Ardakani H, Gerami M, Chashmpoosh M, Omidifar N, Gholami A. Recent Progress in Nanobiosensors for Precise Detection of Blood Glucose Level. Biochem Res Int 2022; 2022:2964705. [PMID: 35083086 PMCID: PMC8786499 DOI: 10.1155/2022/2964705] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 11/18/2021] [Accepted: 12/08/2021] [Indexed: 12/25/2022] Open
Abstract
Diabetes mellitus (DM) follows a series of metabolic diseases categorized by high blood sugar levels. Owing to the increasing diabetes disease in the world, early diagnosis of this disease is critical. New methods such as nanotechnology have made significant progress in many areas of medical science and physiology. Nanobiosensors are very sensible and can identify single virus particles or even low concentrations of a material that can be inherently harmful. One of the main factors for developing glucose sensors in the body is the diagnosis of hypoglycemia in individuals with insulin-dependent diabetes. Therefore, this study aimed to evaluate the most up-to-date and fastest glucose detection method by nanosensors and, as a result, faster and better treatment in medical sciences. In this review, we try to explore new ways to control blood glucose levels and treat diabetes. We begin with a definition of biosensors and their classification and basis, and then we examine the latest biosensors in glucose detection and new biosensors applications, including the artificial pancreas and updating quantum graphene data.
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Affiliation(s)
| | - Mitra Gerami
- Biotechnology Research Center, University of Medical Sciences, Shiraz, Iran
| | - Mostafa Chashmpoosh
- Department of Pathology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Navid Omidifar
- Department of Pathology, School of Medicine, Shiraz University of Medical Sciences, Shiraz, Iran
| | - Ahmad Gholami
- Pharmaceutical Sciences Research Center, University of Medical Sciences, Shiraz, Iran
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17
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Liu Y, Zeng S, Ji W, Yao H, Lin L, Cui H, Santos HA, Pan G. Emerging Theranostic Nanomaterials in Diabetes and Its Complications. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2022; 9:e2102466. [PMID: 34825525 PMCID: PMC8787437 DOI: 10.1002/advs.202102466] [Citation(s) in RCA: 30] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2021] [Revised: 09/03/2021] [Indexed: 05/14/2023]
Abstract
Diabetes mellitus (DM) refers to a group of metabolic disorders that are characterized by hyperglycemia. Oral subcutaneously administered antidiabetic drugs such as insulin, glipalamide, and metformin can temporarily balance blood sugar levels, however, long-term administration of these therapies is associated with undesirable side effects on the kidney and liver. In addition, due to overproduction of reactive oxygen species and hyperglycemia-induced macrovascular system damage, diabetics have an increased risk of complications. Fortunately, recent advances in nanomaterials have provided new opportunities for diabetes therapy and diagnosis. This review provides a panoramic overview of the current nanomaterials for the detection of diabetic biomarkers and diabetes treatment. Apart from diabetic sensing mechanisms and antidiabetic activities, the applications of these bioengineered nanoparticles for preventing several diabetic complications are elucidated. This review provides an overall perspective in this field, including current challenges and future trends, which may be helpful in informing the development of novel nanomaterials with new functions and properties for diabetes diagnosis and therapy.
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Affiliation(s)
- Yuntao Liu
- School of Food & Biological EngineeringJiangsu UniversityZhenjiang212013China
- College of Food ScienceSichuan Agricultural UniversityYaan625014China
| | - Siqi Zeng
- College of Food ScienceSichuan Agricultural UniversityYaan625014China
| | - Wei Ji
- Department of PharmaceuticsSchool of PharmacyJiangsu UniversityZhenjiangJiangsu212013China
| | - Huan Yao
- Sichuan Institute of Food InspectionChengdu610097China
| | - Lin Lin
- School of Food & Biological EngineeringJiangsu UniversityZhenjiang212013China
| | - Haiying Cui
- School of Food & Biological EngineeringJiangsu UniversityZhenjiang212013China
| | - Hélder A. Santos
- Drug Research ProgramDivision of Pharmaceutical Chemistry and TechnologyFaculty of PharmacyUniversity of HelsinkiHelsinkiFI‐00014Finland
- Department of Biomedical Engineering and W.J. Kolff Institute for Biomedical Engineering and Materials ScienceUniversity of Groningen/University Medical Center GroningenAnt. Deusinglaan 1Groningen9713 AVThe Netherlands
| | - Guoqing Pan
- Institute for Advanced MaterialsSchool of Materials Science and EngineeringJiangsu UniversityZhenjiangJiangsu212013China
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18
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Nißler R, Kurth L, Li H, Spreinat A, Kuhlemann I, Flavel BS, Kruss S. Sensing with Chirality-Pure Near-Infrared Fluorescent Carbon Nanotubes. Anal Chem 2021; 93:6446-6455. [PMID: 33830740 DOI: 10.1021/acs.analchem.1c00168] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Semiconducting single-wall carbon nanotubes (SWCNTs) fluoresce in the near-infrared (NIR) region, and the emission wavelength depends on their chirality (n,m). Interactions with the environment affect the fluorescence and can be tailored by functionalizing SWCNTs with biopolymers such as DNA, which is the basis for fluorescent biosensors. So far, such biosensors have been mainly assembled from mixtures of SWCNT chiralities with large spectral overlap, which affects sensitivity as well as selectivity and prevents multiplexed sensing. The main challenge to gain chirality-pure sensors has been to combine approaches to isolate specific SWCNTs and generic (bio)functionalization approaches. Here, we created chirality-pure SWCNT-based NIR biosensors for important analytes such as neurotransmitters and investigated the effect of SWCNT chirality/handedness as well as long-term stability and sensitivity. For this purpose, we used aqueous two-phase extraction (ATPE) to gain chirality-pure (6,5)-, (7,5)-, (9,4)-, and (7,6)-SWCNTs (emission at ∼990, 1040, 1115, and 1130 nm, respectively). An exchange of the surfactant sodium deoxycholate (DOC) to specific single-stranded (ss)DNA sequences yielded monochiral sensors for small analytes (dopamine, riboflavin, ascorbic acid, pH). DOC residues impaired sensitivity, and therefore substantial removal was necessary. The assembled monochiral (6,5)-SWCNTs were up to 10 times brighter than their nonpurified counterparts, and the ssDNA sequence determined the absolute fluorescence intensity as well as colloidal (long-term) stability and selectivity for the analytes. (GT)40-(6,5)-SWCNTs displayed the maximum fluorescence response to the neurotransmitter dopamine (+140%, Kd = 1.9 × 10-7 M) and a long-term stability of >14 days. The specific ssDNA sequences imparted selectivity to the analytes mostly independent of SWCNT chirality and handedness of (±) (6,5)-SWCNTs, which allowed a predictable design. Finally, multiple monochiral/single-color SWCNTs were combined to achieve ratiometric/multiplexed sensing of the important analytes dopamine, riboflavin, H2O2, and pH. In summary, we demonstrated the assembly, characteristics, and potential of monochiral (single-color) SWCNTs for NIR fluorescence sensing applications.
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Affiliation(s)
- Robert Nißler
- Institute of Physical Chemistry, Göttingen University, 37077 Göttingen, Germany.,Physical Chemistry II, Bochum University, 44801 Bochum, Germany
| | - Larissa Kurth
- Institute of Physical Chemistry, Göttingen University, 37077 Göttingen, Germany
| | - Han Li
- Institute of Nanotechnology, Karlsruhe Institute of Technology (KIT), 76344 Eggenstein-Leopoldshafen, Germany
| | - Alexander Spreinat
- Institute of Physical Chemistry, Göttingen University, 37077 Göttingen, Germany
| | - Ilyas Kuhlemann
- Institute of Physical Chemistry, Göttingen University, 37077 Göttingen, Germany
| | - Benjamin S Flavel
- Institute of Nanotechnology, Karlsruhe Institute of Technology (KIT), 76344 Eggenstein-Leopoldshafen, Germany
| | - Sebastian Kruss
- Institute of Physical Chemistry, Göttingen University, 37077 Göttingen, Germany.,Physical Chemistry II, Bochum University, 44801 Bochum, Germany.,Fraunhofer Institute for Microelectronic Circuits and Systems, 47057 Duisburg, Germany
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19
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Hofferber E, Meier J, Herrera N, Stapleton J, Ney K, Francis B, Calkins C, Iverson N. Novel methods to extract and quantify sensors based on single wall carbon nanotube fluorescence from animal tissue and hydrogel-based platforms. Methods Appl Fluoresc 2021; 9:025005. [PMID: 33631740 DOI: 10.1088/2050-6120/abea07] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
Sensors that can quickly and accurately diagnose and monitor human health are currently at the forefront of medical research. Single walled carbon nanotube (SWNT) based optical biosensors are a growing area of research due to the high spatiotemporal resolution of their near infrared fluorescence leading to high tissue transparency and unparalleled sensitivity to analytes of interest. Unfortunately, due to the functionalization requirements of SWNT-based sensors, there are concerns surrounding accumulation and persistence when applied in vivo. In this study, we developed protocols to extract and quantify SWNT from complex solutions and show an 89% sensor retention by hydrogel platforms when implanted in vivo. Animal tissues of interest were also extracted and probed for SWNT content showing no accumulation (0.03 mg l-1 SWNT detection limit). The methods developed in this paper demonstrated one avenue for applying SWNT sensors in vivo without concern for accumulation.
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Affiliation(s)
- Eric Hofferber
- Biological Systems Engineering Department, University of Nebraska-Lincoln, Lincoln, NE, United States of America
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20
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Pinals RL, Ledesma F, Yang D, Navarro N, Jeong S, Pak JE, Kuo L, Chuang YC, Cheng YW, Sun HY, Landry MP. Rapid SARS-CoV-2 Spike Protein Detection by Carbon Nanotube-Based Near-Infrared Nanosensors. NANO LETTERS 2021; 21:2272-2280. [PMID: 33635655 PMCID: PMC10493163 DOI: 10.1021/acs.nanolett.1c00118] [Citation(s) in RCA: 103] [Impact Index Per Article: 34.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
To effectively track and eliminate COVID-19, it is critical to develop tools for rapid and accessible diagnosis of actively infected individuals. Here, we introduce a single-walled carbon nanotube (SWCNT)-based optical sensing approach toward this end. We construct a nanosensor based on SWCNTs noncovalently functionalized with ACE2, a host protein with high binding affinity for the SARS-CoV-2 spike protein. The presence of the SARS-CoV-2 spike protein elicits a robust, 2-fold nanosensor fluorescence increase within 90 min of spike protein exposure. We characterize the nanosensor stability and sensing mechanism and passivate the nanosensor to preserve sensing response in saliva and viral transport medium. We further demonstrate that these ACE2-SWCNT nanosensors retain sensing capacity in a surface-immobilized format, exhibiting a 73% fluorescence turn-on response within 5 s of exposure to 35 mg/L SARS-CoV-2 virus-like particles. Our data demonstrate that ACE2-SWCNT nanosensors can be developed into an optical tool for rapid SARS-CoV-2 detection.
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Affiliation(s)
- Rebecca L Pinals
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
| | - Francis Ledesma
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
| | - Darwin Yang
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
| | - Nicole Navarro
- Department of Chemistry, University of California, Berkeley, California 94720, United States
| | - Sanghwa Jeong
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
| | - John E Pak
- Chan Zuckerberg Biohub, San Francisco, California 94158, United States
| | - Lili Kuo
- Wadsworth Center, New York State Department of Health, Slingerlands, New York 12159, United States
| | - Yung-Chun Chuang
- Leadgene Biomedical Inc., Tainan 71042, Taiwan
- Department of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan 70101, Taiwan
| | | | - Hung-Yu Sun
- Institute of Molecular Medicine, College of Medicine, National Cheng Kung University, Tainan 70101, Taiwan
| | - Markita P Landry
- Department of Chemical and Biomolecular Engineering, University of California, Berkeley, California 94720, United States
- Chan Zuckerberg Biohub, San Francisco, California 94158, United States
- Innovative Genomics Institute (IGI), Berkeley, California 94720, United States
- California Institute for Quantitative Biosciences (QB3), University of California, Berkeley, California 94720, United States
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21
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Meyer D, Telele S, Zelená A, Gillen AJ, Antonucci A, Neubert E, Nißler R, Mann FA, Erpenbeck L, Boghossian AA, Köster S, Kruss S. Transport and programmed release of nanoscale cargo from cells by using NETosis. NANOSCALE 2020; 12:9104-9115. [PMID: 32286598 DOI: 10.1039/d0nr00864h] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Cells can take up nanoscale materials, which has important implications for understanding cellular functions, biocompatibility as well as biomedical applications. Controlled uptake, transport and triggered release of nanoscale cargo is one of the great challenges in biomedical applications of nanomaterials. Here, we study how human immune cells (neutrophilic granulocytes, neutrophils) take up nanomaterials and program them to release this cargo after a certain time period. For this purpose, we let neutrophils phagocytose DNA-functionalized single-walled carbon nanotubes (SWCNTs) in vitro that fluoresce in the near infrared (980 nm) and serve as sensors for small molecules. Cells still migrate, follow chemical gradients and respond to inflammatory signals after uptake of the cargo. To program release, we make use of neutrophil extracellular trap formation (NETosis), a novel cell death mechanism that leads to chromatin swelling, subsequent rupture of the cellular membrane and release of the cell's whole content. By using the process of NETosis, we can program the time point of cargo release via the initial concentration of stimuli such as phorbol 12-myristate-13-acetate (PMA) or lipopolysaccharide (LPS). At intermediate stimulation, cells continue to migrate, follow gradients and surface cues for around 30 minutes and up to several hundred micrometers until they stop and release the SWCNTs. The transported and released SWCNT sensors are still functional as shown by subsequent detection of the neurotransmitter dopamine and reactive oxygen species (H2O2). In summary, we hijack a biological process (NETosis) and demonstrate how neutrophils transport and release functional nanomaterials.
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Affiliation(s)
- Daniel Meyer
- Institute of Physical Chemistry, Göttingen University, 37077 Göttingen, Germany.
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22
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Wu H, Nißler R, Morris V, Herrmann N, Hu P, Jeon SJ, Kruss S, Giraldo JP. Monitoring Plant Health with Near-Infrared Fluorescent H 2O 2 Nanosensors. NANO LETTERS 2020; 20:2432-2442. [PMID: 32097014 DOI: 10.1021/acs.nanolett.9b05159] [Citation(s) in RCA: 86] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Near-infrared (nIR) fluorescent single-walled carbon nanotubes (SWCNTs) were designed and interfaced with leaves of Arabidopsis thaliana plants to report hydrogen peroxide (H2O2), a key signaling molecule associated with the onset of plant stress. The sensor nIR fluorescence response (>900 nm) is quenched by H2O2 with selectivity against other stress-associated signaling molecules and within the plant physiological range (10-100 H2O2 μM). In vivo remote nIR imaging of H2O2 sensors enabled optical monitoring of plant health in response to stresses including UV-B light (-11%), high light (-6%), and a pathogen-related peptide (flg22) (-10%), but not mechanical leaf wounding (<3%). The sensor's high biocompatibility was reflected on similar leaf cell death (<5%) and photosynthetic rates to controls without SWCNT. These optical nanosensors report early signs of stress and will improve our understanding of plant stress communication, provide novel tools for precision agriculture, and optimize the use of agrochemicals in the environment.
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Affiliation(s)
- Honghong Wu
- Department of Botany and Plant Sciences, University of California, Riverside, California 92521, United States
- College of Plant Science and Technology, Huazhong Agricultural University, Wuhan 430070, China
| | - Robert Nißler
- Institute of Physical Chemistry, Georg August University, Göttingen, 37077 Göttingen, Germany
| | - Victoria Morris
- Department of Botany and Plant Sciences, University of California, Riverside, California 92521, United States
| | - Niklas Herrmann
- Institute of Physical Chemistry, Georg August University, Göttingen, 37077 Göttingen, Germany
| | - Peiguang Hu
- Department of Botany and Plant Sciences, University of California, Riverside, California 92521, United States
| | - Su-Ji Jeon
- Department of Botany and Plant Sciences, University of California, Riverside, California 92521, United States
| | - Sebastian Kruss
- Institute of Physical Chemistry, Georg August University, Göttingen, 37077 Göttingen, Germany
| | - Juan Pablo Giraldo
- Department of Botany and Plant Sciences, University of California, Riverside, California 92521, United States
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23
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Selvaggio G, Chizhik A, Nißler R, Kuhlemann L, Meyer D, Vuong L, Preiß H, Herrmann N, Mann FA, Lv Z, Oswald TA, Spreinat A, Erpenbeck L, Großhans J, Karius V, Janshoff A, Pablo Giraldo J, Kruss S. Exfoliated near infrared fluorescent silicate nanosheets for (bio)photonics. Nat Commun 2020; 11:1495. [PMID: 32198383 PMCID: PMC7083911 DOI: 10.1038/s41467-020-15299-5] [Citation(s) in RCA: 27] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2019] [Accepted: 02/28/2020] [Indexed: 12/31/2022] Open
Abstract
Imaging of complex (biological) samples in the near-infrared (NIR) is beneficial due to reduced light scattering, absorption, phototoxicity, and autofluorescence. However, there are few NIR fluorescent materials known and suitable for biomedical applications. Here we exfoliate the layered pigment CaCuSi4O10 (Egyptian Blue, EB) via ball milling and facile tip sonication into NIR fluorescent nanosheets (EB-NS). The size of EB-NS can be tailored to diameters <20 nm and heights down to 1 nm. EB-NS fluoresce at 910 nm and the fluorescence intensity correlates with the number of Cu2+ ions. Furthermore, EB-NS display no bleaching and high brightness compared with other NIR fluorophores. The versatility of EB-NS is demonstrated by in-vivo single-particle tracking and microrheology measurements in Drosophila melanogaster embryos. EB-NS can be uptaken by plants and remotely detected in a low-cost stand-off detection setup. In summary, EB-NS have the potential for a wide range of bioimaging applications.
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Affiliation(s)
- Gabriele Selvaggio
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Alexey Chizhik
- Third Institute of Physics, University of Göttingen, Göttingen, 37077, Germany
| | - Robert Nißler
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Llyas Kuhlemann
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Daniel Meyer
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Loan Vuong
- Institute of Organic and Biomolecular Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Helen Preiß
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Niklas Herrmann
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Florian A Mann
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Zhiyi Lv
- Institute of Developmental Biochemistry, Medical School, University of Göttingen, Göttingen, 37077, Germany
| | - Tabea A Oswald
- Institute of Organic and Biomolecular Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Alexander Spreinat
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Luise Erpenbeck
- Department of Dermatology, Venereology and Allergology, University Medical Center Göttingen, Göttingen, 37075, Germany
| | - Jörg Großhans
- Institute of Developmental Biochemistry, Medical School, University of Göttingen, Göttingen, 37077, Germany
| | - Volker Karius
- Department of Sedimentology and Environmental Geology, Geoscience Center, University of Göttingen, Göttingen, 37077, Germany
| | - Andreas Janshoff
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany
| | - Juan Pablo Giraldo
- Department of Botany and Plant Sciences, University of California, Riverside, California, 92507, USA
| | - Sebastian Kruss
- Institute of Physical Chemistry, University of Göttingen, Göttingen, 37077, Germany.
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24
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Gillen AJ, Siefman DJ, Wu SJ, Bourmaud C, Lambert B, Boghossian AA. Templating colloidal sieves for tuning nanotube surface interactions and optical sensor responses. J Colloid Interface Sci 2019; 565:55-62. [PMID: 31931299 DOI: 10.1016/j.jcis.2019.12.058] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2019] [Revised: 12/11/2019] [Accepted: 12/15/2019] [Indexed: 12/15/2022]
Abstract
Surfactants offer a tunable approach for modulating the exposed surface area of a nanoparticle. They further present a scalable and cost-effective means for suspending single-walled carbon nanotubes (SWCNTs), which have demonstrated practical use as fluorescence sensors. Though surfactant suspensions show record quantum yields for SWCNTs in aqueous solutions, they lack the selectivity that is vital for optical sensing. We present a new method for controlling the selectivity of optical SWCNT sensors through colloidal templating of the exposed surface area. Colloidal nanotube sensors were obtained using various concentrations of sodium cholate, and their performances were compared to DNA-SWCNT optical sensors. Sensor responses were measured against a library of bioanalytes, including neurotransmitters, amino acids, and sugars. We report an intensity response towards dopamine and serotonin for all sodium cholate-suspended SWCNT concentrations. We further identify a selective, 14.1 nm and 10.3 nm wavelength red-shifting response to serotonin for SWCNTs suspended in 1.5 and 0.5 mM sodium cholate, respectively. Through controlled, adsorption-based tuning of the nanotube surface, this study demonstrates the applicability of sub-critical colloidal suspensions to achieve selectivities exceeding those previously reported for DNA-SWCNT sensors.
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Affiliation(s)
- Alice J Gillen
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Daniel J Siefman
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland; Institute of Physics (IPHYS), École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Shang-Jung Wu
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Claire Bourmaud
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
| | - Benjamin Lambert
- École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
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25
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Chio L, Del Bonis-O'Donnell JT, Kline MA, Kim JH, McFarlane IR, Zuckermann RN, Landry MP. Electrostatic Assemblies of Single-Walled Carbon Nanotubes and Sequence-Tunable Peptoid Polymers Detect a Lectin Protein and Its Target Sugars. NANO LETTERS 2019; 19:7563-7572. [PMID: 30958010 DOI: 10.1021/acs.nanolett.8b04955] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
A primary limitation to real-time imaging of metabolites and proteins has been the selective detection of biomolecules that have no naturally occurring or stable molecular recognition counterparts. We present developments in the design of synthetic near-infrared fluorescent nanosensors based on the fluorescence modulation of single-walled carbon nanotubes (SWNTs) with select sequences of surface-adsorbed N-substituted glycine peptoid polymers. We assess the stability of the peptoid-SWNT nanosensor candidates under variable ionic strengths, protease exposure, and cell culture media conditions and find that the stability of peptoid-SWNTs depends on the composition and length of the peptoid polymer. From our library, we identify a peptoid-SWNT assembly that can detect lectin protein wheat germ agglutinin (WGA) with a sensitivity comparable to the concentration of serum proteins. To demonstrate the retention of nanosensor-bound protein activity, we show that WGA on the nanosensor produces an additional fluorescent signal modulation upon exposure to the lectin's target sugars, suggesting the lectin protein remains active and selectively binds its target sugars through ternary molecular recognition interactions relayed to the nanosensor. Our results inform design considerations for developing synthetic molecular recognition elements by assembling peptoid polymers on SWNTs and also demonstrate these assemblies can serve as optical nanosensors for lectin proteins and their target sugars. Together, these data suggest certain peptoid sequences can be assembled with SWNTs to serve as versatile optical probes to detect proteins and their molecular substrates.
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Affiliation(s)
- Linda Chio
- Department of Chemical and Biomolecular Engineering , University of California, Berkeley , Berkeley , California 94720 , United States
| | | | - Mark A Kline
- The Molecular Foundry , Lawrence Berkeley National Laboratory , 1 Cyclotron Road , Berkeley , California 94720 , United States
| | - Jae Hong Kim
- The Molecular Foundry , Lawrence Berkeley National Laboratory , 1 Cyclotron Road , Berkeley , California 94720 , United States
| | - Ian R McFarlane
- Department of Chemical and Biomolecular Engineering , University of California, Berkeley , Berkeley , California 94720 , United States
| | - Ronald N Zuckermann
- The Molecular Foundry , Lawrence Berkeley National Laboratory , 1 Cyclotron Road , Berkeley , California 94720 , United States
| | - Markita P Landry
- Department of Chemical and Biomolecular Engineering , University of California, Berkeley , Berkeley , California 94720 , United States
- Chan-Zuckerberg Biohub , San Francisco , California 94158 , United States
- California Institute for Quantitative Biosciences (qb3) , University of California, Berkeley , Berkeley , California 94720 , United States
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26
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Gillen AJ, Boghossian AA. Non-covalent Methods of Engineering Optical Sensors Based on Single-Walled Carbon Nanotubes. Front Chem 2019; 7:612. [PMID: 31616652 PMCID: PMC6763700 DOI: 10.3389/fchem.2019.00612] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2019] [Accepted: 08/21/2019] [Indexed: 12/31/2022] Open
Abstract
Optical sensors based on single-walled carbon nanotubes (SWCNTs) demonstrate tradeoffs that limit their use in in vivo and in vitro environments. Sensor characteristics are primarily governed by the non-covalent wrapping used to suspend the hydrophobic SWCNTs in aqueous solutions, and we herein review the advantages and disadvantages of several of these different wrappings. Sensors based on surfactant wrappings can show enhanced quantum efficiency, high stability, scalability, and diminished selectivity. Conversely, sensors based on synthetic and bio-polymer wrappings tend to show lower quantum efficiency, stability, and scalability, while demonstrating improved selectivity. Major efforts have focused on optimizing sensors based on DNA wrappings, which have intermediate properties that can be improved through synthetic modifications. Although SWCNT sensors have, to date, been mainly engineered using empirical approaches, herein we highlight alternative techniques based on iterative screening that offer a more guided approach to tuning sensor properties. These more rational techniques can yield new combinations that incorporate the advantages of the diverse nanotube wrappings available to create high performance optical sensors.
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27
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Mann FA, Lv Z, Großhans J, Opazo F, Kruss S. Nanobody‐Conjugated Nanotubes for Targeted Near‐Infrared In Vivo Imaging and Sensing. Angew Chem Int Ed Engl 2019; 58:11469-11473. [DOI: 10.1002/anie.201904167] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2019] [Revised: 05/03/2019] [Indexed: 12/16/2022]
Affiliation(s)
- Florian A. Mann
- Institute of Physical ChemistryGeorg-August Universität Göttingen Tammannstraße 6 37077 Göttingen Germany
| | - Zhiyi Lv
- Institut Für EntwicklungsbiochemieUMG/Georg-August Universität Göttingen Justus-von-Liebig Weg 11 37077 Göttingen Germany
| | - Jörg Großhans
- Institut Für EntwicklungsbiochemieUMG/Georg-August Universität Göttingen Justus-von-Liebig Weg 11 37077 Göttingen Germany
| | - Felipe Opazo
- Center for Biostructural Imaging of Neurodegeneration Von-Siebold-Strasse 3a 37075 Göttingen Germany
- Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB) Humboldtallee 23 37073 Göttingen Germany
- NanoTag Biotechnologies GmbH Rudolf-Wissell-Straße 28a 37079 Göttingen Germany
| | - Sebastian Kruss
- Institute of Physical ChemistryGeorg-August Universität Göttingen Tammannstraße 6 37077 Göttingen Germany
- Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB) Humboldtallee 23 37073 Göttingen Germany
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28
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Mann FA, Lv Z, Großhans J, Opazo F, Kruss S. Nanoröhren‐Nanobody‐Konjugate als zielgerichtete Sonden und Marker für die In‐vivo‐Nahinfrarot‐Bildgebung. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201904167] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Florian A. Mann
- Institut für Physikalische ChemieGeorg-August Universität Göttingen Tammannstraße 6 37077 Göttingen Deutschland
| | - Zhiyi Lv
- Institut Für EntwicklungsbiochemieUMG/Georg-August Universität Göttingen Justus-von-Liebig Weg 11 37077 Göttingen Deutschland
| | - Jörg Großhans
- Institut Für EntwicklungsbiochemieUMG/Georg-August Universität Göttingen Justus-von-Liebig Weg 11 37077 Göttingen Deutschland
| | - Felipe Opazo
- Center for Biostructural Imaging of Neurodegeneration Von-Siebold-Strasse 3a 37075 Göttingen Deutschland
- Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB) Humboldtallee 23 37073 Göttingen Deutschland
- NanoTag Biotechnologies GmbH Rudolf-Wissell-Straße 28a 37079 Göttingen Deutschland
| | - Sebastian Kruss
- Institut für Physikalische ChemieGeorg-August Universität Göttingen Tammannstraße 6 37077 Göttingen Deutschland
- Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB) Humboldtallee 23 37073 Göttingen Deutschland
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29
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Zubkovs V, Antonucci A, Schuergers N, Lambert B, Latini A, Ceccarelli R, Santinelli A, Rogov A, Ciepielewski D, Boghossian AA. Spinning-disc confocal microscopy in the second near-infrared window (NIR-II). Sci Rep 2018; 8:13770. [PMID: 30214049 PMCID: PMC6137042 DOI: 10.1038/s41598-018-31928-y] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2018] [Accepted: 08/23/2018] [Indexed: 11/09/2022] Open
Abstract
Fluorescence microscopy in the second near-infrared optical window (NIR-II, 1000–1350 nm) has become a technique of choice for non-invasive in vivo imaging. The deep penetration of NIR light in living tissue, as well as negligible tissue autofluorescence within this optical range, offers increased resolution and contrast with even greater penetration depths. Here, we present a custom-built spinning-disc confocal laser microscope (SDCLM) that is specific to imaging in the NIR-II. The SDCLM achieves a lateral resolution of 0.5 ± 0.1 µm and an axial resolution of 0.6 ± 0.1 µm, showing a ~17% and ~45% enhancement in lateral and axial resolution, respectively, compared to the corresponding wide-field configuration. We furthermore showcase several applications that demonstrate the use of the SDCLM for in situ, spatiotemporal tracking of NIR particles and bioanalytes within both synthetic and biological systems.
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Affiliation(s)
- Vitalijs Zubkovs
- Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, CH-1015, Switzerland
| | - Alessandra Antonucci
- Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, CH-1015, Switzerland
| | - Nils Schuergers
- Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, CH-1015, Switzerland
| | - Benjamin Lambert
- Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, CH-1015, Switzerland
| | | | | | | | - Andrii Rogov
- Nikon GmbH, Swiss Branch, Egg, 8132, Switzerland
| | | | - Ardemis A Boghossian
- Institute of Chemical Sciences and Engineering (ISIC), École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, CH-1015, Switzerland.
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30
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Gillen AJ, Kupis-Rozmysłowicz J, Gigli C, Schuergers N, Boghossian AA. Xeno Nucleic Acid Nanosensors for Enhanced Stability Against Ion-Induced Perturbations. J Phys Chem Lett 2018; 9:4336-4343. [PMID: 30004705 DOI: 10.1021/acs.jpclett.8b01879] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
The omnipresence of salts in biofluids creates a pervasive challenge in designing sensors suitable for in vivo applications. Fluctuations in ion concentrations have been shown to affect the sensitivity and selectivity of optical sensors based on single-walled carbon nanotubes wrapped with single-stranded DNA (ssDNA-SWCNTs). We herein observe fluorescence wavelength shifting for ssDNA-SWCNT-based optical sensors in the presence of divalent cations at concentrations above 3.5 mM. In contrast, no shifting was observed for concentrations up to 350 mM for sensors bioengineered with increased rigidity using xeno nucleic acids (XNAs). Transient fluorescence measurements reveal distinct optical transitions for ssDNA- and XNA-based wrappings during ion-induced conformation changes, with XNA-based sensors showing increased permanence in conformational and signal stability. This demonstration introduces synthetic biology as a complementary means for enhancing nanotube optoelectronic behavior, unlocking previously unexplored possibilities for developing nanobioengineered sensors with augmented capabilities.
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Affiliation(s)
- Alice J Gillen
- École Polytechnique Fédérale de Lausanne (EPFL) , Lausanne 1015 , Switzerland
| | | | - Carlo Gigli
- Politecnico di Torino , Turin 10129 , Italy
- Université Denis Diderot (Paris VII) , Paris 75013 , France
| | - Nils Schuergers
- École Polytechnique Fédérale de Lausanne (EPFL) , Lausanne 1015 , Switzerland
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31
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Polo E, Nitka TT, Neubert E, Erpenbeck L, Vuković L, Kruss S. Control of Integrin Affinity by Confining RGD Peptides on Fluorescent Carbon Nanotubes. ACS APPLIED MATERIALS & INTERFACES 2018; 10:17693-17703. [PMID: 29708725 DOI: 10.1021/acsami.8b04373] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
Integrins are transmembrane receptors that mediate cell-adhesion, signaling cascades and platelet-mediated blood clotting. Most integrins bind to the common short peptide Arg-Gly-Asp (RGD). The conformational freedom of the RGD motif determines how strong and to which integrins it binds. Here, we present a novel approach to tune binding constants by confining RGD peptide motifs via noncovalent adsorption of single-stranded DNA (ssDNA) anchors onto single-walled carbon nanotubes (SWCNTs). Semiconducting SWCNTs display fluorescence in the near-infrared (nIR) region and are versatile fluorescent building blocks for imaging and biosensing. The basic idea of this approach is that the DNA adsorbed on the SWCNT surface determines the conformational freedom of the RGD motif and affects binding affinities. The RGD motif was conjugated to different ssDNA sequences in both linear ssDNA-RGD and bridged ssDNA-RGD-ssDNA geometries. Molecular dynamics (MD) simulations show that the RGD motif in all the synthesized systems is mostly exposed to solvent and thus available for binding, but its flexibility depends on the exact geometry. The affinity for the human platelet integrin αIIbβ3 could be modulated up to 15-fold by changing the ssDNA sequence. IC50 values varied from 309 nM for (C)20-RGD/SWCNT hybrids to 29 nM for (GT)15-RGD/SWCNT hybrids. When immobilized onto surface adhesion of epithelial cells increased 6-fold for (GT)15-RGD/SWCNTs. (GT)15-RGD/SWCNTs also increased the number of adhering human platelets by a factor of 4.8. Additionally, αIIbβ3 integrins on human platelets were labeled in the nIR by incubating them with these ssDNA-peptide/SWCNT hybrids. In summary, we show that ssDNA-peptide hybrid structures noncovalently adsorb onto SWCNTs and serve as recognition units for cell surface receptors such as integrins. The DNA sequence affects the overall RGD affinity, which is a versatile and straightforward approach to tune binding affinities. In combination with the nIR fluorescence properties of SWCNTs, these new hybrid materials promise many applications in integrin targeting and bioimaging.
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Affiliation(s)
- Elena Polo
- Institute of Physical Chemistry , Göttingen University , Tammanstrasse 6 , 37077 Göttingen , Germany
| | - Tadeusz T Nitka
- Department of Chemistry and Biochemistry , The University of Texas at El Paso , El Paso , Texas 79968 , United States
| | - Elsa Neubert
- Institute of Physical Chemistry , Göttingen University , Tammanstrasse 6 , 37077 Göttingen , Germany
- University Medical Center, Department of Dermatology , Göttingen University , 37077 Göttingen , Germany
| | - Luise Erpenbeck
- University Medical Center, Department of Dermatology , Göttingen University , 37077 Göttingen , Germany
| | - Lela Vuković
- Department of Chemistry and Biochemistry , The University of Texas at El Paso , El Paso , Texas 79968 , United States
| | - Sebastian Kruss
- Institute of Physical Chemistry , Göttingen University , Tammanstrasse 6 , 37077 Göttingen , Germany
- Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB) , 37073 Göttingen , Germany
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32
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Jiang D, Liu Z, Wu K, Mou L, Ovalle-Robles R, Inoue K, Zhang Y, Yuan N, Ding J, Qiu J, Huang Y, Liu Z. Fabrication of Stretchable Copper Coated Carbon Nanotube Conductor for Non-Enzymatic Glucose Detection Electrode with Low Detection Limit and Selectivity. Polymers (Basel) 2018; 10:E375. [PMID: 30966410 PMCID: PMC6415456 DOI: 10.3390/polym10040375] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/13/2018] [Revised: 03/18/2018] [Accepted: 03/19/2018] [Indexed: 11/17/2022] Open
Abstract
The increasing demand for wearable glucose sensing has stimulated growing interest in stretchable electrodes. The development of the electrode materials having large stretchability, low detection limit, and good selectivity is the key component for constructing high performance wearable glucose sensors. In this work, we presented fabrication of stretchable conductor based on the copper coated carbon nanotube sheath-core fiber, and its application as non-enzymatic electrode for glucose detection with high stretchability, low detection limit, and selectivity. The sheath-core fiber was fabricated by coating copper coated carbon nanotube on a pre-stretched rubber fiber core followed by release of pre-stretch, which had a hierarchically buckled structure. It showed a small resistance change as low as 27% as strain increasing from 0% to 500% strain, and a low resistance of 0.4 Ω·cm-1 at strain of 500%. This electrode showed linear glucose concentration detection in the range between 0.05 mM and 5 mM and good selectivity against sucrose, lactic acid, uric acid, acrylic acid in phosphate buffer saline solution, and showed stable signal in high salt concentration. The limit of detection (LOD) was 0.05 mM, for the range of 0.05⁻5 mM, the sensitivity is 46 mA·M-1. This electrode can withstand large strain of up to 60% with negligible influence on its performance.
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Affiliation(s)
- Dawei Jiang
- School of Materials Science and Engineering, Jiangsu Collaborative Innovation Center of Photovolatic Science and Engineering, Changzhou University, Changzhou 213164, China.
| | - Zhongsheng Liu
- State Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Functional Polymer Materials, Ministry of Education, College of Pharmacy, Nankai University, Tianjin 300071, China.
| | - Kunkun Wu
- School of Materials Science and Engineering, Jiangsu Collaborative Innovation Center of Photovolatic Science and Engineering, Changzhou University, Changzhou 213164, China.
| | - Linlin Mou
- State Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Functional Polymer Materials, Ministry of Education, College of Pharmacy, Nankai University, Tianjin 300071, China.
| | - Raquel Ovalle-Robles
- Lintec of America, Nano-Science and Technology Center Richardson, Dallas, TX 75081, USA.
| | - Kanzan Inoue
- Lintec of America, Nano-Science and Technology Center Richardson, Dallas, TX 75081, USA.
| | - Yu Zhang
- Department of Building Engineering, Logistics University of PAPF, Tianjin 300309, China.
- College of Civil Engineering, Tongji University, Shanghai 200092, China.
| | - Ningyi Yuan
- School of Materials Science and Engineering, Jiangsu Collaborative Innovation Center of Photovolatic Science and Engineering, Changzhou University, Changzhou 213164, China.
| | - Jianning Ding
- School of Materials Science and Engineering, Jiangsu Collaborative Innovation Center of Photovolatic Science and Engineering, Changzhou University, Changzhou 213164, China.
| | - Jianhua Qiu
- School of Materials Science and Engineering, Jiangsu Collaborative Innovation Center of Photovolatic Science and Engineering, Changzhou University, Changzhou 213164, China.
| | - Yi Huang
- State Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Functional Polymer Materials, Ministry of Education, College of Pharmacy, Nankai University, Tianjin 300071, China.
| | - Zunfeng Liu
- School of Materials Science and Engineering, Jiangsu Collaborative Innovation Center of Photovolatic Science and Engineering, Changzhou University, Changzhou 213164, China.
- State Key Laboratory of Medicinal Chemical Biology, Key Laboratory of Functional Polymer Materials, Ministry of Education, College of Pharmacy, Nankai University, Tianjin 300071, China.
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33
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Mann FA, Horlebein J, Meyer NF, Meyer D, Thomas F, Kruss S. Carbon Nanotubes Encapsulated in Coiled-Coil Peptide Barrels. Chemistry 2018; 24:12241-12245. [DOI: 10.1002/chem.201800993] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2018] [Indexed: 11/06/2022]
Affiliation(s)
- Florian A. Mann
- Institute of Physical Chemistry; Georg-August Universität Göttingen; Tammannstraße 6 37077 Göttingen Germany
| | - Jan Horlebein
- Institute of Physical Chemistry; Georg-August Universität Göttingen; Tammannstraße 6 37077 Göttingen Germany
| | - Nils Frederik Meyer
- Institute of Organic and Biomolecular Chemistry; Georg-August Universität Göttingen; Tammannstraße 2 37077 Göttingen Germany
| | - Daniel Meyer
- Institute of Physical Chemistry; Georg-August Universität Göttingen; Tammannstraße 6 37077 Göttingen Germany
| | - Franziska Thomas
- Institute of Organic and Biomolecular Chemistry; Georg-August Universität Göttingen; Tammannstraße 2 37077 Göttingen Germany
- Center for Biostructural Imaging of Neurodegeneration; Von-Siebold-Strasse 3a 37075 Göttingen Germany
| | - Sebastian Kruss
- Institute of Physical Chemistry; Georg-August Universität Göttingen; Tammannstraße 6 37077 Göttingen Germany
- Center for Nanoscale Microscopy and Molecular Physiology of the Brain (CNMPB); Humboldtallee 23 37073 Göttingen Germany
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