1
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Wu F, Kong Z, Ge P, Sun D, Liu D, Dong Z, Chen G. Ecotoxicological evaluation and regeneration impairment of planarians by dibutyl phthalate. ENVIRONMENTAL RESEARCH 2024; 257:119403. [PMID: 38871274 DOI: 10.1016/j.envres.2024.119403] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2024] [Revised: 05/31/2024] [Accepted: 06/09/2024] [Indexed: 06/15/2024]
Abstract
Commonly utilized as a plasticizer in the food and chemical sectors, Dibutyl phthalate (DBP) poses threats to the environment and human well-being as it seeps or moves into the surroundings. Nevertheless, research on the harmfulness of DBP to aquatic organisms is limited, and its impact on stem cells and tissue regeneration remains unidentified. Planarians, recognized for their robust regenerative capabilities and sensitivity to aquatic pollutants, are emerging animal models in toxicology. This study investigated the comprehensive toxicity effects of environmentally relevant levels of DBP on planarians. It revealed potential toxicity mechanisms through the use of immunofluorescence, chromatin dispersion assay, Western blot, quantitative real-time fluorescence quantitative PCR (qRT-PCR), chromatin behavioral and histological analyses, immunofluorescence, and terminal dUTP nickel-end labeling (TUNEL). Findings illustrated that DBP caused morphological and motor abnormalities, tissue damage, regenerative inhibition, and developmental neurotoxicity. Further research revealed increased apoptosis and suppressed stem cell proliferation and differentiation, disrupting a balance of cell proliferation and death, ultimately leading to morphological defects and functional abnormalities. This was attributed to oxidative stress and DNA damage caused by excessive release of reactive oxygen species (ROS). This exploration furnishes fresh perspectives on evaluating the toxicity peril posed by DBP in aquatic organisms.
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Affiliation(s)
- Fan Wu
- College of Life Science, Henan Normal University, Xinxiang, 453007, China
| | - Zhihong Kong
- College of Life Science, Henan Normal University, Xinxiang, 453007, China
| | - Peng Ge
- College of Life Science, Henan Normal University, Xinxiang, 453007, China
| | - Dandan Sun
- College of Life Science, Henan Normal University, Xinxiang, 453007, China
| | - Dezeng Liu
- College of Life Science, Henan Normal University, Xinxiang, 453007, China
| | - Zimei Dong
- College of Life Science, Henan Normal University, Xinxiang, 453007, China.
| | - Guangwen Chen
- College of Life Science, Henan Normal University, Xinxiang, 453007, China.
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2
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Bjedov D, Barbosa RS, de Oliveira DP, Dorta DJ, Sarmento MI, Sarmento RA, Silva ALP, Gravato C. A Dangerous Couple: Sequential Effect of Phosphorus Flame-Retardant and Polyurethane Decrease Locomotor Activity in Planarian Girardia tigrina. BIOLOGY 2024; 13:337. [PMID: 38785819 PMCID: PMC11117760 DOI: 10.3390/biology13050337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2024] [Revised: 05/08/2024] [Accepted: 05/10/2024] [Indexed: 05/25/2024]
Abstract
Understanding the interplay among organophosphorus flame retardants (OPFRs), microplastics, and freshwater organisms is crucial for unravelling the dynamics within freshwater environments and foreseeing the potential impacts of organic pollutants and plastic contamination. For that purpose, the present research assessed the exposure impact of 10 mg L-1 flame-retardant aluminium diethylphosphinate (ALPI), 10 μg mg-1liver microplastics polyurethane (PU), and the combination of ALPI and PU on the freshwater planarian Girardia tigrina. The exposure to both ALPI and PU revealed a sequential effect, i.e., a decrease in locomotor activity, while oxidative stress biomarkers (total glutathione, catalase, glutathione S-transferase, lipid peroxidation) and metabolic responses (cholinesterase activity, electron transport system, and lactate dehydrogenase) remained unaffected. Despite this fact, it was possible to observe that the range of physiological responses in exposed organisms varied, in particular in the cases of the electron transport system, cholinesterase activity, glutathione S-transferase, catalase, and levels of total glutathione and proteins, showing that the energetic costs for detoxification and antioxidant capacity might be causing a lesser amount of energy allocated for the planarian activity. By examining the physiological, behavioural, and ecological responses of planarians to these pollutants, insights can be gained into broader ecosystem-level effects and inform strategies for mitigating environmental risks associated with OPFRs and microplastic pollution in freshwater environments.
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Affiliation(s)
- Dora Bjedov
- Centre for Ecology, Evolution and Environmental Changes (cE3c) & CHANGE—Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisbon, Portugal;
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisbon, Portugal
| | - Rone S. Barbosa
- Graduate Program in Forestry and Environmental Sciences, Universidade Federal do Tocantins, Campus de Gurupi, Gurupi 77402-970, TO, Brazil (M.I.S.); (R.A.S.)
| | - Danielle Palma de Oliveira
- School of Pharmaceutical Sciences, University of São Paulo, Campus de Ribeirão Preto, Ribeirão Preto 77402-970, SP, Brazil;
- National Institute of Science and Technology for Detection, Toxicological Evaluation and Removal of Micropollutants and Radioactive Substances (INCT-DATREM), Araraquara 14800-060, SP, Brazil;
| | - Daniel Junqueira Dorta
- National Institute of Science and Technology for Detection, Toxicological Evaluation and Removal of Micropollutants and Radioactive Substances (INCT-DATREM), Araraquara 14800-060, SP, Brazil;
- Department of Chemistry, Faculty of Philosophy, Science and Letters at Ribeirão Preto, University of São Paulo, Ribeirão Preto 14040-901, SP, Brazil
| | - Maíra Ignacio Sarmento
- Graduate Program in Forestry and Environmental Sciences, Universidade Federal do Tocantins, Campus de Gurupi, Gurupi 77402-970, TO, Brazil (M.I.S.); (R.A.S.)
| | - Renato Almeida Sarmento
- Graduate Program in Forestry and Environmental Sciences, Universidade Federal do Tocantins, Campus de Gurupi, Gurupi 77402-970, TO, Brazil (M.I.S.); (R.A.S.)
| | - Ana L. Patrício Silva
- Centre for Environmental and Marine Studies (CESAM), Departament of Biology, University of Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal;
| | - Carlos Gravato
- Centre for Ecology, Evolution and Environmental Changes (cE3c) & CHANGE—Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisbon, Portugal;
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisbon, Portugal
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3
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Rosner A, Ballarin L, Barnay-Verdier S, Borisenko I, Drago L, Drobne D, Concetta Eliso M, Harbuzov Z, Grimaldi A, Guy-Haim T, Karahan A, Lynch I, Giulia Lionetto M, Martinez P, Mehennaoui K, Oruc Ozcan E, Pinsino A, Paz G, Rinkevich B, Spagnuolo A, Sugni M, Cambier S. A broad-taxa approach as an important concept in ecotoxicological studies and pollution monitoring. Biol Rev Camb Philos Soc 2024; 99:131-176. [PMID: 37698089 DOI: 10.1111/brv.13015] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Revised: 08/23/2023] [Accepted: 08/28/2023] [Indexed: 09/13/2023]
Abstract
Aquatic invertebrates play a pivotal role in (eco)toxicological assessments because they offer ethical, cost-effective and repeatable testing options. Additionally, their significance in the food chain and their ability to represent diverse aquatic ecosystems make them valuable subjects for (eco)toxicological studies. To ensure consistency and comparability across studies, international (eco)toxicology guidelines have been used to establish standardised methods and protocols for data collection, analysis and interpretation. However, the current standardised protocols primarily focus on a limited number of aquatic invertebrate species, mainly from Arthropoda, Mollusca and Annelida. These protocols are suitable for basic toxicity screening, effectively assessing the immediate and severe effects of toxic substances on organisms. For more comprehensive and ecologically relevant assessments, particularly those addressing long-term effects and ecosystem-wide impacts, we recommended the use of a broader diversity of species, since the present choice of taxa exacerbates the limited scope of basic ecotoxicological studies. This review provides a comprehensive overview of (eco)toxicological studies, focusing on major aquatic invertebrate taxa and how they are used to assess the impact of chemicals in diverse aquatic environments. The present work supports the use of a broad-taxa approach in basic environmental assessments, as it better represents the natural populations inhabiting various ecosystems. Advances in omics and other biochemical and computational techniques make the broad-taxa approach more feasible, enabling mechanistic studies on non-model organisms. By combining these approaches with in vitro techniques together with the broad-taxa approach, researchers can gain insights into less-explored impacts of pollution, such as changes in population diversity, the development of tolerance and transgenerational inheritance of pollution responses, the impact on organism phenotypic plasticity, biological invasion outcomes, social behaviour changes, metabolome changes, regeneration phenomena, disease susceptibility and tissue pathologies. This review also emphasises the need for harmonised data-reporting standards and minimum annotation checklists to ensure that research results are findable, accessible, interoperable and reusable (FAIR), maximising the use and reusability of data. The ultimate goal is to encourage integrated and holistic problem-focused collaboration between diverse scientific disciplines, international standardisation organisations and decision-making bodies, with a focus on transdisciplinary knowledge co-production for the One-Health approach.
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Affiliation(s)
- Amalia Rosner
- Israel Oceanographic and Limnological Research, National Institute of Oceanography, PO 2336 Sha'ar Palmer 1, Haifa, 3102201, Israel
| | - Loriano Ballarin
- Department of Biology, University of Padova, via Ugo Bassi 58/B, Padova, I-35121, Italy
| | - Stéphanie Barnay-Verdier
- Sorbonne Université; CNRS, INSERM, Université Côte d'Azur, Institute for Research on Cancer and Aging Nice, 28 avenue Valombrose, Nice, F-06107, France
| | - Ilya Borisenko
- Faculty of Biology, Department of Embryology, Saint Petersburg State University, Universitetskaya embankment 7/9, Saint Petersburg, 199034, Russia
| | - Laura Drago
- Department of Biology, University of Padova, via Ugo Bassi 58/B, Padova, I-35121, Italy
| | - Damjana Drobne
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Večna pot 111, Ljubljana, 1111, Slovenia
| | - Maria Concetta Eliso
- Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, Naples, 80121, Italy
- Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of Messina, Messina, Italy
| | - Zoya Harbuzov
- Israel Oceanographic and Limnological Research, National Institute of Oceanography, PO 2336 Sha'ar Palmer 1, Haifa, 3102201, Israel
- Leon H. Charney School of Marine Sciences, Department of Marine Biology, University of Haifa, 199 Aba Koushy Ave., Haifa, 3498838, Israel
| | - Annalisa Grimaldi
- Department of Biotechnology and Life Sciences, University of Insubria, Via J. H. Dunant, Varese, 3-21100, Italy
| | - Tamar Guy-Haim
- Israel Oceanographic and Limnological Research, National Institute of Oceanography, PO 2336 Sha'ar Palmer 1, Haifa, 3102201, Israel
| | - Arzu Karahan
- Middle East Technical University, Institute of Marine Sciences, Erdemli-Mersin, PO 28, 33731, Turkey
| | - Iseult Lynch
- School of Geography, Earth and Environmental Sciences, University of Birmingham, Birmingham, B15 2TT, UK
| | - Maria Giulia Lionetto
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via prov. le Lecce -Monteroni, Lecce, I-73100, Italy
- NBFC, National Biodiversity Future Center, Piazza Marina, 61, Palermo, I-90133, Italy
| | - Pedro Martinez
- Department de Genètica, Microbiologia i Estadística, Universitat de Barcelona, Av. Diagonal 643, Barcelona, 08028, Spain
- Institut Català de Recerca i Estudis Avançats (ICREA), Passeig de Lluís Companys, Barcelona, 08010, Spain
| | - Kahina Mehennaoui
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology (LIST), 41, rue du Brill, Belvaux, L-4422, Luxembourg
| | - Elif Oruc Ozcan
- Faculty of Arts and Science, Department of Biology, Cukurova University, Balcali, Saricam, Adana, 01330, Turkey
| | - Annalisa Pinsino
- National Research Council, Institute of Translational Pharmacology (IFT), National Research Council (CNR), Via Ugo La Malfa 153, Palermo, 90146, Italy
| | - Guy Paz
- Israel Oceanographic and Limnological Research, National Institute of Oceanography, PO 2336 Sha'ar Palmer 1, Haifa, 3102201, Israel
| | - Baruch Rinkevich
- Israel Oceanographic and Limnological Research, National Institute of Oceanography, PO 2336 Sha'ar Palmer 1, Haifa, 3102201, Israel
| | - Antonietta Spagnuolo
- Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, Naples, 80121, Italy
| | - Michela Sugni
- Department of Environmental Science and Policy, University of Milan, Via Celoria 26, Milan, 20133, Italy
| | - Sébastien Cambier
- Environmental Research and Innovation (ERIN) Department, Luxembourg Institute of Science and Technology (LIST), 41, rue du Brill, Belvaux, L-4422, Luxembourg
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4
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Zhang T, Vďačný P. Deciphering phylogenetic relationships of and delimiting species boundaries within the controversial ciliate genus Conchophthirus using an integrative morpho-evo approach. Mol Phylogenet Evol 2024; 190:107931. [PMID: 37742881 DOI: 10.1016/j.ympev.2023.107931] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2023] [Revised: 09/15/2023] [Accepted: 09/21/2023] [Indexed: 09/26/2023]
Abstract
The phylum Ciliophora (ciliates) comprises about 2600 symbiotic and over 5500 free-living species. The inclusion of symbiotic ciliates in phylogenetic analyses often challenges traditional classification frameworks due to their morphological adaptions to the symbiotic lifestyle. Conchophthirus is such a controversial obligate endocommensal genus whose affinities to other symbiotic and free-living scuticociliates are still poorly understood. Using uni- and multivariate morphometrics as well as 2D-based molecular and phylogenetic analyses, we attempted to test for the monophyly of Conchophthirus, study the boundaries of Conchophthirus species isolated from various bivalves at mesoscale, and reveal the phylogenetic relationships of Conchophthirus to other scuticociliates. Multidimensional analyses of morphometric and cell geometric data generated the same homogenous clusters, as did phylogenetic analyses based on 144 new sequences of two mitochondrial and five nuclear molecular markers. Conchophthirus is not closely related to 'core' scuticociliates represented by the orders Pleuronematida and Philasterida, as assumed in the past using morphological data. Nuclear and mitochondrial markers consistently showed the free-living Dexiotricha and the mouthless endosymbiotic Haptophrya to be the nearest relatives of Conchophthirus. These three highly morphologically and ecologically dissimilar genera represent an orphan clade from the early radiation of scuticociliates in molecular phylogenies.
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Affiliation(s)
- Tengyue Zhang
- Department of Zoology, Comenius University in Bratislava, 842 15 Bratislava, Slovak Republic; Institute of Evolution and Marine Biodiversity, Ocean University of China, Qingdao 266003, PR China
| | - Peter Vďačný
- Department of Zoology, Comenius University in Bratislava, 842 15 Bratislava, Slovak Republic.
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5
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Vila-Farré M, Rozanski A, Ivanković M, Cleland J, Brand JN, Thalen F, Grohme MA, von Kannen S, Grosbusch AL, Vu HTK, Prieto CE, Carbayo F, Egger B, Bleidorn C, Rasko JEJ, Rink JC. Evolutionary dynamics of whole-body regeneration across planarian flatworms. Nat Ecol Evol 2023; 7:2108-2124. [PMID: 37857891 PMCID: PMC10697840 DOI: 10.1038/s41559-023-02221-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Accepted: 09/14/2023] [Indexed: 10/21/2023]
Abstract
Regenerative abilities vary dramatically across animals. Even amongst planarian flatworms, well-known for complete regeneration from tiny body fragments, some species have restricted regeneration abilities while others are almost entirely regeneration incompetent. Here, we assemble a diverse live collection of 40 planarian species to probe the evolution of head regeneration in the group. Combining quantification of species-specific head-regeneration abilities with a comprehensive transcriptome-based phylogeny reconstruction, we show multiple independent transitions between robust whole-body regeneration and restricted regeneration in freshwater species. RNA-mediated genetic interference inhibition of canonical Wnt signalling in RNA-mediated genetic interference-sensitive species bypassed all head-regeneration defects, suggesting that the Wnt pathway is linked to the emergence of planarian regeneration defects. Our finding that Wnt signalling has multiple roles in the reproductive system of the model species Schmidtea mediterranea raises the possibility that a trade-off between egg-laying, asexual reproduction by fission/regeneration and Wnt signalling drives regenerative trait evolution. Although quantitative comparisons of Wnt signalling levels, yolk content and reproductive strategy across our species collection remained inconclusive, they revealed divergent Wnt signalling roles in the reproductive system of planarians. Altogether, our study establishes planarians as a model taxon for comparative regeneration research and presents a framework for the mechanistic evolution of regenerative abilities.
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Affiliation(s)
- Miquel Vila-Farré
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.
- Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.
| | - Andrei Rozanski
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany
- Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
| | - Mario Ivanković
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany
- Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
| | - James Cleland
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany
- Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
| | - Jeremias N Brand
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany
| | - Felix Thalen
- Animal Evolution and Biodiversity, Georg-August-Universität Göttingen, Göttingen, Germany
- Cardio-CARE, Medizincampus Davos, Davos, Switzerland
| | - Markus A Grohme
- Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
| | | | | | - Hanh T-K Vu
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany
- Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany
- European Molecular Biology Laboratory, Heidelberg, Germany
| | - Carlos E Prieto
- Department of Zoology & Animal Cell Biology, University of the Basque Country (UPV/EHU), Leioa, Spain
| | - Fernando Carbayo
- Laboratório de Ecologia e Evolução. Escola de Artes, Ciências e Humanidades, Universidade de São Paulo, São Paulo, Brazil
| | - Bernhard Egger
- Department of Zoology, University of Innsbruck, Innsbruck, Austria
| | - Christoph Bleidorn
- Animal Evolution and Biodiversity, Georg-August-Universität Göttingen, Göttingen, Germany
| | - John E J Rasko
- Gene and Stem Cell Therapy Program Centenary Institute, Camperdown, New South Wales, Australia
- Faculty of Medicine and Health, University of Sydney, Sydney, New South Wales, Australia
- Cell & Molecular Therapies, Royal Prince Alfred Hospital, Camperdown, New South Wales, Australia
| | - Jochen C Rink
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.
- Max Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.
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6
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Qian R, Yan Y, Pei Y, Zhang Y, Chi Y, Chen Y, Hao K, Xu Z, Yang G, Shao Z, Wang Y, Li X, Lu C, Zhang X, Chen K, Zhang W, Wang B, Ying Z, Huang K. Spatial localization ability of planarians identified through a light maze paradigm. PLoS One 2023; 18:e0288118. [PMID: 37467232 DOI: 10.1371/journal.pone.0288118] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Accepted: 06/20/2023] [Indexed: 07/21/2023] Open
Abstract
Spatial localization ability is crucial for free-living animals to fit the environment. As shown by previous studies, planarians can be conditioned to discriminate directions. However, due to their simplicity and primitiveness, they had never been considered to have true spatial localization ability to retrieve locations of objects and places in the environment. Here, we introduce a light maze training paradigm to demonstrate that a planarian worm can navigate to a former recognized place from the start point, even if the worm is transferred into a newly produced maze. This finding identifies the spatial localization ability of planarians for the first time, which provides clues for the evolution of spatial learning. Since the planarians have a primitive brain with simple structures, this paradigm can also provide a simplified model for a detailed investigation of spatial learning.
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Affiliation(s)
- Renzhi Qian
- College of Biological Science, China Agricultural University, Beijing, China
| | - Yuan Yan
- College of Biological Science, China Agricultural University, Beijing, China
| | - Yu Pei
- College of Biological Science, China Agricultural University, Beijing, China
| | - Yixuan Zhang
- College of Biological Science, China Agricultural University, Beijing, China
| | - Yuanwei Chi
- College of Biological Science, China Agricultural University, Beijing, China
| | - Yuxuan Chen
- College of Biological Science, China Agricultural University, Beijing, China
| | - Kun Hao
- College of Biological Science, China Agricultural University, Beijing, China
| | - Zhen Xu
- College of Biological Science, China Agricultural University, Beijing, China
| | - Guang Yang
- College of Biological Science, China Agricultural University, Beijing, China
| | - Zilun Shao
- College of Biological Science, China Agricultural University, Beijing, China
| | - Yuhao Wang
- College of Biological Science, China Agricultural University, Beijing, China
| | - Xinran Li
- College of Biological Science, China Agricultural University, Beijing, China
| | - Chenxu Lu
- College of Biological Science, China Agricultural University, Beijing, China
| | - Xuan Zhang
- College of Biological Science, China Agricultural University, Beijing, China
| | - Kehan Chen
- College of Engineering, China Agricultural University, Beijing, China
| | - Wenqiang Zhang
- College of Engineering, China Agricultural University, Beijing, China
| | - Baoqing Wang
- College of Biological Science, China Agricultural University, Beijing, China
| | - Zhengxin Ying
- College of Biological Science, China Agricultural University, Beijing, China
| | - Kaiyuan Huang
- College of Biological Science, China Agricultural University, Beijing, China
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7
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Rabiasz A, Ziętkiewicz E. Schmidtea mediterranea as a Model Organism to Study the Molecular Background of Human Motile Ciliopathies. Int J Mol Sci 2023; 24:ijms24054472. [PMID: 36901899 PMCID: PMC10002865 DOI: 10.3390/ijms24054472] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2023] [Revised: 02/21/2023] [Accepted: 02/22/2023] [Indexed: 03/12/2023] Open
Abstract
Cilia and flagella are evolutionarily conserved organelles that form protrusions on the surface of many growth-arrested or differentiated eukaryotic cells. Due to the structural and functional differences, cilia can be roughly classified as motile and non-motile (primary). Genetically determined dysfunction of motile cilia is the basis of primary ciliary dyskinesia (PCD), a heterogeneous ciliopathy affecting respiratory airways, fertility, and laterality. In the face of the still incomplete knowledge of PCD genetics and phenotype-genotype relations in PCD and the spectrum of PCD-like diseases, a continuous search for new causative genes is required. The use of model organisms has been a great part of the advances in understanding molecular mechanisms and the genetic basis of human diseases; the PCD spectrum is not different in this respect. The planarian model (Schmidtea mediterranea) has been intensely used to study regeneration processes, and-in the context of cilia-their evolution, assembly, and role in cell signaling. However, relatively little attention has been paid to the use of this simple and accessible model for studying the genetics of PCD and related diseases. The recent rapid development of the available planarian databases with detailed genomic and functional annotations prompted us to review the potential of the S. mediterranea model for studying human motile ciliopathies.
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8
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Bray SR, Wyss LS, Chai C, Lozada ME, Wang B. Adaptive robustness through incoherent signaling mechanisms in a regenerative brain. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.01.20.523817. [PMID: 36711454 PMCID: PMC9882340 DOI: 10.1101/2023.01.20.523817] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Animal behavior emerges from collective dynamics of interconnected neurons, making it vulnerable to connectome damage. Paradoxically, many organisms maintain significant behavioral output after large-scale neural injury. Molecular underpinnings of this extreme robustness remain largely unknown. Here, we develop a quantitative behavioral analysis pipeline to measure previously uncharacterized long-lasting latent memory states in planarian flatworms during whole-brain regeneration. By combining >20,000 animal trials with neural population dynamic modeling, we show that long-range volumetric peptidergic signals allow the planarian to rapidly reestablish latent states and restore coarse behavior after large structural perturbations to the nervous system, while small-molecule neuromodulators gradually refine the precision. The different time and length scales of neuropeptide and small-molecule transmission generate incoherent patterns of neural activity which competitively regulate behavior and memory. Controlling behavior through opposing communication mechanisms creates a more robust system than either alone and may serve as a generic approach to construct robust neural networks.
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Affiliation(s)
- Samuel R. Bray
- Department of Bioengineering, Stanford University, Stanford, CA, USA
| | - Livia S. Wyss
- Department of Biology, Stanford University, Stanford, CA, USA
| | - Chew Chai
- Department of Bioengineering, Stanford University, Stanford, CA, USA
| | - Maria E. Lozada
- Department of Bioengineering, Stanford University, Stanford, CA, USA
- Department of Biomedical Engineering, University of Miami, Coral Gables, FL, USA
| | - Bo Wang
- Department of Bioengineering, Stanford University, Stanford, CA, USA
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9
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Zhang T, Rurik I, Vďačný P. A holistic approach to inventory the diversity of mobilid ciliates (Protista: Ciliophora: Peritrichia). ORG DIVERS EVOL 2023. [DOI: 10.1007/s13127-022-00601-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
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10
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Phylotranscriptomics interrogation uncovers a complex evolutionary history for the planarian genus Dugesia (Platyhelminthes, Tricladida) in the Western Mediterranean. Mol Phylogenet Evol 2023; 178:107649. [PMID: 36280167 DOI: 10.1016/j.ympev.2022.107649] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 10/13/2022] [Accepted: 10/18/2022] [Indexed: 11/17/2022]
Abstract
The Mediterranean is one of the most biodiverse areas of the Paleartic region. Here, basing on large data sets of single copy orthologs obtained from transcriptomic data, we investigated the evolutionary history of the genus Dugesia in the Western Mediterranean area. The results corroborated that the complex paleogeological history of the region was an important driver of diversification for the genus, speciating as microplates and islands were forming. These processes led to the differentiation of three main biogeographic clades: Iberia-Apennines-Alps, Corsica-Sardinia, and Iberia-Africa. The internal relationships of these major clades were analysed with several representative samples per species. The use of large data sets regarding the number of loci and samples, as well as state-of-the-art phylogenomic inference methods allowed us to answer different unresolved questions about the evolution of particular groups, such as the diversification path of D. subtentaculata in the Iberian Peninsula and its colonization of Africa. Additionally, our results support the differentiation of D. benazzii in two lineages which could represent two species. Finally, we analysed here for the first time a comprehensive number of samples from several asexual Iberian populations whose assignment at the species level has been an enigma through the years. The phylogenies obtained with different inference methods showed a branching topology of asexual individuals at the base of sexual clades. We hypothesize that this unexpected topology is related to long-term asexuality. This work represents the first phylotranscriptomic analysis of Tricladida, laying the first stone of the genomic era in phylogenetic studies on this taxonomic group.
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11
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Drees L, Rink JC. The planarian flatworm Schmidtea mediterranea. Nat Methods 2023; 20:3-5. [PMID: 36635538 DOI: 10.1038/s41592-022-01727-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Affiliation(s)
- Leonard Drees
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany
| | - Jochen C Rink
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen, Germany.
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12
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Hall RN, Weill U, Drees L, Leal-Ortiz S, Li H, Khariton M, Chai C, Xue Y, Rosental B, Quake SR, Sánchez Alvarado A, Melosh NA, Fire AZ, Rink JC, Wang B. Heterologous reporter expression in the planarian Schmidtea mediterranea through somatic mRNA transfection. CELL REPORTS METHODS 2022; 2:100298. [PMID: 36313809 PMCID: PMC9606109 DOI: 10.1016/j.crmeth.2022.100298] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/23/2021] [Revised: 06/11/2022] [Accepted: 08/25/2022] [Indexed: 06/16/2023]
Abstract
Planarians have long been studied for their regenerative abilities. Moving forward, tools for ectopic expression of non-native proteins will be of substantial value. Using a luminescent reporter to overcome the strong autofluorescence of planarian tissues, we demonstrate heterologous protein expression in planarian cells and live animals. Our approach is based on the introduction of mRNA through several nanotechnological and chemical transfection methods. We improve reporter expression by altering untranslated region (UTR) sequences and codon bias, facilitating the measurement of expression kinetics in both isolated cells and whole planarians using luminescence imaging. We also examine protein expression as a function of variations in the UTRs of delivered mRNA, demonstrating a framework to investigate gene regulation at the post-transcriptional level. Together, these advances expand the toolbox for the mechanistic analysis of planarian biology and establish a foundation for the development and expansion of transgenic techniques in this unique model system.
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Affiliation(s)
| | - Uri Weill
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen 37077, Germany
| | - Leonard Drees
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen 37077, Germany
| | - Sergio Leal-Ortiz
- Department of Materials Science and Engineering, Stanford University, Stanford, CA 94305, USA
| | - Hongquan Li
- Department of Electrical Engineering, Stanford University, Stanford, CA 94305, USA
| | - Margarita Khariton
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
| | - Chew Chai
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
| | - Yuan Xue
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
| | - Benyamin Rosental
- The Shraga Segal Department of Microbiology, Immunology, and Genetics, Faculty of Health Sciences, Center for Regenerative Medicine and Stem Cells, Ben Gurion University of the Negev, Beer-Sheva 84105, Israel
| | - Stephen R. Quake
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
- Department of Applied Physics, Stanford University, Stanford, CA 94305, USA
- Chan Zuckerberg Biohub, San Francisco, CA 94158, USA
| | - Alejandro Sánchez Alvarado
- Stowers Institute for Medical Research, Kansas City, MO 64110, USA
- Howard Hughes Medical Institute, Kansas City, MO 64110, USA
| | - Nicholas A. Melosh
- Department of Materials Science and Engineering, Stanford University, Stanford, CA 94305, USA
| | - Andrew Z. Fire
- Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA
- Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA
| | - Jochen C. Rink
- Department of Tissue Dynamics and Regeneration, Max Planck Institute for Multidisciplinary Sciences, Göttingen 37077, Germany
| | - Bo Wang
- Department of Bioengineering, Stanford University, Stanford, CA 94305, USA
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13
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Duncan EM, Nowotarski SH, Guerrero-Hernández C, Ross EJ, D'Orazio JA, McKinney S, McHargue MC, Guo L, McClain M, Alvarado AS. Molecular characterization of a flatworm Girardia isolate from Guanajuato, Mexico. Dev Biol 2022; 489:165-177. [PMID: 35710033 PMCID: PMC11104013 DOI: 10.1016/j.ydbio.2022.06.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2022] [Revised: 05/28/2022] [Accepted: 06/08/2022] [Indexed: 11/03/2022]
Abstract
Planarian flatworms are best known for their impressive regenerative capacity, yet this trait varies across species. In addition, planarians have other features that share morphology and function with the tissues of many other animals, including an outer mucociliary epithelium that drives planarian locomotion and is very similar to the epithelial linings of the human lung and oviduct. Planarians occupy a broad range of ecological habitats and are known to be sensitive to changes in their environment. Yet, despite their potential to provide valuable insight to many different fields, very few planarian species have been developed as laboratory models for mechanism-based research. Here we describe a previously undocumented planarian isolate, Girardia sp. (Guanajuato). After collecting this isolate from a freshwater habitat in central Mexico, we characterized it at the morphological, cellular, and molecular level. We show that Girardia sp. (Guanajuato) not only shares features with animals in the Girardia genus but also possesses traits that appear unique to this isolate. By thoroughly characterizing this new planarian isolate, our work facilitates future comparisons to other flatworms and further molecular dissection of the unique and physiologically-relevant traits observed in this Girardia sp. (Guanajuato) isolate.
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Affiliation(s)
| | - Stephanie H Nowotarski
- Stowers Institute for Medical Research, Kansas City, MO, USA; Howard Hughes Medical Institute, Kansas City, MO, USA
| | | | - Eric J Ross
- Stowers Institute for Medical Research, Kansas City, MO, USA; Howard Hughes Medical Institute, Kansas City, MO, USA
| | | | - Sean McKinney
- Stowers Institute for Medical Research, Kansas City, MO, USA
| | | | - Longhua Guo
- University of California, Los Angeles, CA, USA
| | | | - Alejandro Sánchez Alvarado
- Stowers Institute for Medical Research, Kansas City, MO, USA; Howard Hughes Medical Institute, Kansas City, MO, USA.
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14
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Vásquez-Doorman C, Escobedo J, Allende ML. Current state of knowledge on freshwater planarians (Platyhelminthes, Tricladida, Dugesiidae) from Chile. NEOTROPICAL BIOLOGY AND CONSERVATION 2022. [DOI: 10.3897/neotropical.17.e82779] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
The unique geography of Chile encompasses a wide diversity of ecosystems and a rich biodiversity. However, the platyhelminth fauna has been poorly studied. The aim of this work is to compile the historical record of freshwater planarians described for this country. We accessed worldwide databases and published articles to provide a comprehensive review of their discovery history, morphological characteristics and their localities. Freshwater planarians have been collected mainly in central and southern Chile, while in the northern region a single species has been described. The discovery of new species of freshwater triclads has the potential to reveal novel animal models to study regeneration and/or biological adaptations, as some species are suitable for culture in the laboratory. We discuss the many reasons why further research is needed for this animal group, which should include genomic and molecular genetic studies.
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15
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Ebner JN, Wyss MK, Ritz D, von Fumetti S. Effects of thermal acclimation on the proteome of the planarian Crenobia alpina from an alpine freshwater spring. J Exp Biol 2022; 225:276068. [PMID: 35875852 PMCID: PMC9440759 DOI: 10.1242/jeb.244218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2022] [Accepted: 07/18/2022] [Indexed: 11/25/2022]
Abstract
Species' acclimation capacity and their ability to maintain molecular homeostasis outside ideal temperature ranges will partly predict their success following climate change-induced thermal regime shifts. Theory predicts that ectothermic organisms from thermally stable environments have muted plasticity, and that these species may be particularly vulnerable to temperature increases. Whether such species retained or lost acclimation capacity remains largely unknown. We studied proteome changes in the planarian Crenobia alpina, a prominent member of cold-stable alpine habitats that is considered to be a cold-adapted stenotherm. We found that the species' critical thermal maximum (CTmax) is above its experienced habitat temperatures and that different populations exhibit differential CTmax acclimation capacity, whereby an alpine population showed reduced plasticity. In a separate experiment, we acclimated C. alpina individuals from the alpine population to 8, 11, 14 or 17°C over the course of 168 h and compared their comprehensively annotated proteomes. Network analyses of 3399 proteins and protein set enrichment showed that while the species' proteome is overall stable across these temperatures, protein sets functioning in oxidative stress response, mitochondria, protein synthesis and turnover are lower in abundance following warm acclimation. Proteins associated with an unfolded protein response, ciliogenesis, tissue damage repair, development and the innate immune system were higher in abundance following warm acclimation. Our findings suggest that this species has not suffered DNA decay (e.g. loss of heat-shock proteins) during evolution in a cold-stable environment and has retained plasticity in response to elevated temperatures, challenging the notion that stable environments necessarily result in muted plasticity. Summary: The proteome of an alpine Crenobia alpina population shows plasticity in response to acclimation to warmer temperatures.
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Affiliation(s)
- Joshua Niklas Ebner
- 1 Spring Ecology Research Group, Department of Environmental Sciences, University of Basel, Basel, Switzerland
| | - Mirjam Kathrin Wyss
- 1 Spring Ecology Research Group, Department of Environmental Sciences, University of Basel, Basel, Switzerland
| | - Danilo Ritz
- 2 Proteomics Core Facility, Biozentrum, University of Basel, Basel, Switzerland
| | - Stefanie von Fumetti
- 1 Spring Ecology Research Group, Department of Environmental Sciences, University of Basel, Basel, Switzerland
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16
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Rataj M, Zhang T, Vd’ačný P. Nuclear and Mitochondrial SSU rRNA Genes Reveal Hidden Diversity of Haptophrya Endosymbionts in Freshwater Planarians and Challenge Their Traditional Classification in Astomatia. Front Microbiol 2022; 13:830951. [PMID: 35495648 PMCID: PMC9048206 DOI: 10.3389/fmicb.2022.830951] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2021] [Accepted: 03/18/2022] [Indexed: 11/13/2022] Open
Abstract
Like many other aquatic animals, freshwater planarians have also become partners of symbiotic ciliates from the class Oligohymenophorea. In the present study, we explored the hidden diversity and addressed the questionable systematic position of mouthless obligatory gut endosymbionts of freshwater planarians, using the nuclear and mitochondrial SSU rRNA genes. Although all isolated ciliates morphologically corresponded to a single species, molecular analyses suggested the existence of three genetically distinct entities: Haptophrya planariarum, Haptophrya dugesiarum nov. spec., and Haptophrya schmidtearum nov. spec. The two former species share the same planarian host, which indicates a speciation model involving one duplication event without host switching. Such a diversification pattern was recognized also in astome ciliates inhabiting megascolecid and glossoscolecid earthworms. The present multi-gene phylogenies along with the secondary structure of the mitochondrial 16S rRNA molecule, however, challenge the traditional classification of Haptophrya within the subclass Astomatia. Haptophrya very likely evolved from an orphan scuticociliate lineage by the loss of oral apparatus and by the transformation of the thigmotactic field into an adhesive sucker. Since astomy evolved multiple times independently within the Oligohymenophorea, the loss of cell mouth cannot be used as a sole argument for the assignment of Haptophrya to the Astomatia anymore.
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17
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Silva LCR, Dornelas ASP, de Souza Saraiva A, Gravato C, Pestana JLT, da Maia Soares AMV, Sarmento RA. Do bio-insecticides affect only insect species? Behavior, regeneration, and sexual reproduction of a non-target freshwater planarian. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:10665-10674. [PMID: 34528200 DOI: 10.1007/s11356-021-16493-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2021] [Accepted: 09/07/2021] [Indexed: 06/13/2023]
Abstract
Bio-insecticides have been increasingly used worldwide as ecofriendly alternatives to pesticides, but data on their effects in non-target freshwater organisms is still scarce and limited to insects. The aim of this study was to determine the lethal and sub-lethal effects of the bio-insecticides Bac Control (based on Bacillus thuringiensis kurstaki-Btk) and Boveril (based on Beauveria bassiana-Bb) on regeneration, behavioral, and reproductive endpoints of the freshwater planarian Girardia tigrina. The estimated LC50-48h were > 800 mg a.i./L for Btk and 60.74 mg a.i./L for Bb. In addition, exposure to Btk significantly decreased locomotion and feeding activities of planarians (lowest observed effect concentration (LOEC) of 12.5 mg a.i./L Btk) and fecundity rate (LOEC = 3.12 mg a.i./L Btk), whereas exposure to Bb significantly delayed regeneration (LOEC = 0.75 mg a.i./L Bb) and decreased fecundity rate (1.5 mg a.i./L Bb) of planarians. Thus, both bio-insecticides induced deleterious sub-lethal effects on a non-insect freshwater invertebrate species. However, only Bb-based formulation affected the survival, fecundity rate, and regeneration at concentrations below the maximum predicted environmental concentration (PEC = 247 mg/L). Thus, care should be taken when using such formulations as alternatives to chemical insecticides near aquatic ecosystems.
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Affiliation(s)
- Laila Cristina Rezende Silva
- Programa de Pós-graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970, Gurupi, Tocantins, Brazil
| | - Aline Silvestre Pereira Dornelas
- Programa de Pós-graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970, Gurupi, Tocantins, Brazil
| | - Althiéris de Souza Saraiva
- Instituto Federal de Educação, Ciência e Tecnologia Goiano-Campus Campos Belos (Laboratório de Conservação de Agroecossistemas e Ecotoxicologia), 73840-000, Campos Belos, Goiás, Brazil
| | - Carlos Gravato
- Faculdade de Ciências and CESAM, Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - João Luís Teixeira Pestana
- Departamento de Biologia and CESAM, Universidade de Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal
| | - Amadeu Mortágua Velho da Maia Soares
- Programa de Pós-graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970, Gurupi, Tocantins, Brazil
- Departamento de Biologia and CESAM, Universidade de Aveiro, Campus de Santiago, 3810-193, Aveiro, Portugal
| | - Renato Almeida Sarmento
- Programa de Pós-graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970, Gurupi, Tocantins, Brazil.
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18
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Inoue T, Agata K. Quantification of planarian behaviors. Dev Growth Differ 2021; 64:16-37. [PMID: 34866186 DOI: 10.1111/dgd.12765] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Revised: 10/06/2021] [Accepted: 10/23/2021] [Indexed: 11/30/2022]
Abstract
Research on individual behaviors can help to reveal the processes and mechanisms that mediate an animal's habits and interactions with the environment. Importantly, individual behaviors arise as outcomes of genetic programs, morphogenesis, physiological processes, and neural functions; thus, behavioral analyses can be used to detect disorders in these processes. Planarians belong to an early branching bilateral group of organisms that possess a simple central nervous system. Furthermore, planarians display various behavioral responses to the environment via their nervous system. Planarians also have remarkable regenerative abilities, including whole-brain regeneration. Therefore, the combination of planarians' phylogenetic position, behavioral properties, regenerative ability, and genetic accessibility provides a unique opportunity to understand the basic mechanisms underlying the anatomical properties of neural morphogenesis and the dynamic physiological processes and neural function. Here, we describe a step-by-step protocol for conducting simple behavioral analyses in planarians with the aim of helping to introduce researchers to the utility of performing behavioral analyses in planarians. Since the conditions of planarians impact experimental results and reproducibility, this protocol begins with a method for maintaining planarians. Next, we introduce the behavioral tests as well as the methods for quantifying them using minimal and cost-effective equipment and materials. Finally, we present a unique RNAi technique that enables conditional silencing of neural activity in the brain of planarians.
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Affiliation(s)
- Takeshi Inoue
- Division of Adaptation Physiology, Faculty of Medicine, Tottori University, Yonago, Japan
| | - Kiyokazu Agata
- National Institute for Basic Biology, National Institutes of Natural Sciences, Okazaki, Japan
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19
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Chryseobacterium schmidteae sp. nov. a novel bacterial species isolated from planarian Schmidtea mediterranea. Sci Rep 2021; 11:11002. [PMID: 34040129 PMCID: PMC8155073 DOI: 10.1038/s41598-021-90562-3] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 05/13/2021] [Indexed: 02/07/2023] Open
Abstract
Marseille-P9602T is a Chryseobacterium-like strain that we isolated from planarian Schmidtea mediterranea and characterized by taxono-genomic approach. We found that Marseille-P9602T strain exhibits a 16S rRNA gene sequence similarity of 98.76% with Chryseobacterium scophthalmum LMG 13028T strain, the closest phylogenetic neighbor. Marseille-P9602T strain was observed to be a yellowish-pigmented, Gram-negative, rod-shaped bacterium, growing in aerobic conditions and belonging to the Flavobacteriaceae family. The major fatty acids detected are 13-methyl-tetradecanoic acid (57%), 15-methylhexadecenoic acid (18%) and 12-methyl-tetradecanoic acid (8%). Marseille-P9602 strain size was found from genome assembly to be of 4,271,905 bp, with a 35.5% G + C content. The highest values obtained for Ortho-ANI and dDDH were 91.67% and 44.60%, respectively. Thus, hereby we unravel that Marseille-P9602 strain is sufficiently different from other closed related species and can be classified as a novel bacterial species, for which we propose the name of Chryseobacterium schmidteae sp. nov. Type strain is Marseille-P9602T (= CSUR P9602T = CECT 30295T).
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20
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Dornelas ASP, Sarmento RA, Saraiva AS, Barbosa RS, Vieira MM, Gravato C, Soares AMVM. Effects of two biopesticides and salt on behaviour, regeneration and sexual reproduction of the freshwater planarian Girardia tigrina. JOURNAL OF HAZARDOUS MATERIALS 2021; 404:124089. [PMID: 33049628 DOI: 10.1016/j.jhazmat.2020.124089] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Revised: 09/22/2020] [Accepted: 09/22/2020] [Indexed: 06/11/2023]
Abstract
Microbial insecticides are being used as ecologically-friendly alternatives to traditional insecticides. However, their effects have been poorly investigated on non-target freshwater species, with exception of a few insect species. Moreover, combined effects of microbial insecticides with other environmental stressors, such as salinity, have never been investigated. Thus, our goal was to assess the effects of Bac-Control® (based in Bacillus thuringiensis - Btk) and Boveril® (based in Beauveria bassiana - Bb) with increasing salinities (NaCl) on freshwater planarian Girardia tigrina. It has been reported that increased salinity levels affect freshwater organisms compromising their survival by triggering adaptation processes to cope with osmotic stress. Our results showed delayed regeneration, decreased locomotion and feeding on planarians exposed to NaCl, whereas their sexual reproduction was not affected. Both microbial insecticides impaired feeding, locomotor activity, regeneration, and sexual reproduction of planarians. Planarians exposed to microbial insecticides compromised their progeny. Therefore, microbial insecticides might not be ecologically friendly alternatives to chemical insecticides. Interestingly, harmful effects of microbial insecticides with increasing salinities showed an inadequate response of planarians to cope with induction of their immune response and osmoregulation.
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Affiliation(s)
- Aline S P Dornelas
- Programa de Pós-graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970 Gurupi, Tocantins, Brazil
| | - Renato A Sarmento
- Programa de Pós-graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970 Gurupi, Tocantins, Brazil
| | - Althiéris S Saraiva
- Instituto Federal de Educação, Ciência e Tecnologia Goiano - Campus Campos Belos (Laboratório de Conservação de Agroecossistemas e Ecotoxicologia), Campos Belos, 73840-000 Goiás, Brazil
| | - Rone S Barbosa
- Programa de Pós-graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970 Gurupi, Tocantins, Brazil
| | - Mayane M Vieira
- Curso de Química Ambiental, Universidade Federal do Tocantins, 77410-530 Gurupi, Tocantins, Brazil
| | - Carlos Gravato
- Faculdade de Ciências & CESAM, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
| | - Amadeu M V M Soares
- Programa de Pós-graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970 Gurupi, Tocantins, Brazil; Departamento de Biologia & CESAM, Universidade de Aveiro, Campus de Santiago, 3810-193 Aveiro, Portugal.
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21
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Simão FCP, Gravato C, Machado AL, Soares AMVM, Pestana JLT. Effects of pyrene and benzo[a]pyrene on the reproduction and newborn morphology and behavior of the freshwater planarian Girardia tigrina. CHEMOSPHERE 2021; 264:128448. [PMID: 33032223 DOI: 10.1016/j.chemosphere.2020.128448] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2020] [Revised: 09/22/2020] [Accepted: 09/24/2020] [Indexed: 06/11/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are ubiquitous pollutants of aquatic ecosystems. Because they are persistent, there is great potential for chronic toxicity to aquatic species, and the evaluation of reproductive effects is fundamental. In this context, planarians are interesting experimental animals, since they can be sensitive to environmental pollutants, and a wide range of reproductive-related endpoints can be assessed. In this work we evaluated fecundity (number of cocoons), fertility (number of newborns), newborn anomalies, adult weight, regenerative abilities and PAH-residues in tissues of the freshwater planarian Girardia tigrina, exposed to either pyrene or benzo[a]pyrene (B[a]P). Pyrene reduced planarian fecundity and fertility at 18.75 μg L-1 and 75.00 μg L-1, while B[a]P reduced planarian fecundity at the 37.50 μg L-1 treatment, which was accompanied by a 33.7% reduction in fertility. Cocoons were kept in clean media and newborns were evaluated for behavioral and morphological anomalies. Many of the newborns resulting from the B[a]P experiment revealed behavioral anomalies, such as spasms and uncoordinated movements. These behavioral anomalies were observed in 12.9% and 38.2% of newborns resulting from the exposure of adult planarians to 9.38 μg L-1 and 37.50 μg L-1 of B[a]P, respectively. This study is the first report on the effects of PAHs in freshwater planarians' sexual reproduction and a decreased reproductive output was evidenced. Moreover, the exposure of adults to B[a]P lead to defects in newborns, raising concern on the possible long-term consequences of these compounds for natural planarian populations.
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Affiliation(s)
- Fátima C P Simão
- CESAM & Departamento de Biologia, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal.
| | - Carlos Gravato
- Faculdade de Ciências & CESAM, Universidade de Lisboa, Campo Grande, 1749-016, Lisboa, Portugal
| | - Ana Luísa Machado
- CESAM & Departamento de Biologia, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal
| | - Amadeu M V M Soares
- CESAM & Departamento de Biologia, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal
| | - João L T Pestana
- CESAM & Departamento de Biologia, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal
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22
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Fields C, Levin M. Why isn't sex optional? Stem-cell competition, loss of regenerative capacity, and cancer in metazoan evolution. Commun Integr Biol 2020; 13:170-183. [PMID: 33403054 PMCID: PMC7746248 DOI: 10.1080/19420889.2020.1838809] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Revised: 10/14/2020] [Accepted: 10/15/2020] [Indexed: 12/15/2022] Open
Abstract
Animals that can reproduce vegetatively by fission or budding and also sexually via specialized gametes are found in all five primary animal lineages (Bilateria, Cnidaria, Ctenophora, Placozoa, Porifera). Many bilaterian lineages, including roundworms, insects, and most chordates, have lost the capability of vegetative reproduction and are obligately gametic. We suggest a developmental explanation for this evolutionary phenomenon: obligate gametic reproduction is the result of germline stem cells winning a winner-take-all competition with non-germline stem cells for control of reproduction and hence lineage survival. We develop this suggestion by extending Hamilton's rule, which factors the relatedness between parties into the cost/benefit analysis that underpins cooperative behaviors, to include similarity of cellular state. We show how coercive or deceptive cell-cell signaling can be used to make costly cooperative behaviors appear less costly to the cooperating party. We then show how competition between stem-cell lineages can render an ancestral combination of vegetative reproduction with facultative sex unstable, with one or the other process driven to extinction. The increased susceptibility to cancer observed in obligately-sexual lineages is, we suggest, a side-effect of deceptive signaling that is exacerbated by the loss of whole-body regenerative abilities. We suggest a variety of experimental approaches for testing our predictions.
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Affiliation(s)
| | - Michael Levin
- Allen Discovery Center at Tufts University, Medford, MA, USA
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23
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Wang Z, Cao K, Wang D, Hua B, Zhang H, Xie X. Cadmium sulfate induces apoptosis in planarians. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:39308-39316. [PMID: 32648224 DOI: 10.1007/s11356-020-09991-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Accepted: 07/01/2020] [Indexed: 06/11/2023]
Abstract
With rapid socio-economic development, heavy metal pollution in water has become common and affects both environment and human health. Cadmium (Cd) has been recognized as one of the heavy metals which cause acute or chronic toxic effects if ingested. Although its toxicity is undisputed, the underlying molecular mechanisms in vivo are not fully understood. Planarians, a model organism famous for their regenerative prowess, have long been utilized to study the effects of chemical exposure. In this study, we observed apoptosis with TUNEL assay in planarians induced by cadmium sulfate (CdSO4) in a dose-dependent manner. The apoptosis-related genes were detected with quantitative RT-PCR. Significant changes in c-Myc, P53, and BcL-2 were indicated, which may play a partial role in the regulation of the process of apoptosis in the planarians. H&E staining showed that Cd had obvious biological toxicity in the planarians. Here, new insights on metal toxicity mechanisms are provided, contributing to understand how CdSO4 induces the pathological and physiological processes of apoptosis in the living bodies. Meanwhile, planarians are proved to be a freshwater pollution indicator and toxicological research model.
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Affiliation(s)
- Zhiyang Wang
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, China
| | - Keqing Cao
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, China
| | - Dan Wang
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, China
| | - Bingjie Hua
- GeWu Medical Research Institute (GMRI), Xi'an, China
| | - Haiyan Zhang
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, China.
- GeWu Medical Research Institute (GMRI), Xi'an, China.
| | - Xin Xie
- Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Science, Northwest University, Xi'an, China.
- GeWu Medical Research Institute (GMRI), Xi'an, China.
- Department of Translational Medicine, Institute of Integrated Medical Information, Xi'an, China.
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24
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Saraiva AS, Sarmento RA, Gravato C, Rodrigues ACM, Campos D, Simão FCP, Soares AMVM. Strategies of cellular energy allocation to cope with paraquat-induced oxidative stress: Chironomids vs Planarians and the importance of using different species. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 741:140443. [PMID: 32887009 DOI: 10.1016/j.scitotenv.2020.140443] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Revised: 06/20/2020] [Accepted: 06/21/2020] [Indexed: 05/22/2023]
Abstract
Paraquat (PQ) is still used in several countries worldwide as an herbicide for weed control in agricultural production, ponds, reservoirs and irrigation canals. Thus, PQ is frequently found in surface water systems and is potentially toxic to aquatic organisms, since it can cause mitochondrial dysfunction altering in the redox state of cells. This study aimed to investigate the chronic effects of PQ to Chironomus riparius and Girardia tigrina, and compare their physiological strategies to cope with environmental stress. The mean emergence time was the most sensitive endpoint for Chironomids, with the lowest observed effect concentrations (LOEC) being 0.02 for males and 0.1 mg PQ L-1 for females. Moreover, PQ reduced the body weight of male and female imagoes, with LOECs of 0.5 and 2.5 mg PQ L-1, respectively. Paraquat also decreased the respiration rate (LOEC = 2.5 mg PQ L-1) and total glutathione (tGSH) content (LOEC = 0.5 mg PQ L-1). Thus, the aerobic production of energy was not affected and allowed chironomids to cope with oxidative stress induced by PQ, but with consequent physiological costs in terms of development rates and weight of adults. In planarians, PQ decreased the locomotion and feeding activity, and delayed photoreceptor regeneration (LOECs = 2.5 mg PQ L-1 for all endpoints). Despite increased aerobic energy production (LOEC = 0.5 mg PQ L-1), planarians were not able to cope with oxidative stress induced by the highest PQ concentrations, since lipid peroxidation levels were significantly increased (LOEC = 2.5 mg PQ L-1) concomitantly with a significant decrease of tGSH (LOEC = 2.5 mg PQ L-1). These results showed that planarians were unable to cope with oxidative stress induced by PQ with consequent impairments of behavior and regeneration despite an increased aerobic energy production.
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Affiliation(s)
- Althiéris S Saraiva
- Departamento de Agropecuária (Conservação de Agroecossistemas e Ecotoxicologia), Instituto Federal de Educação, Ciência e Tecnologia, Goiano - Campus Campos Belos, 73840-000 Campos Belos, Goiás, Brazil
| | - Renato A Sarmento
- Programa de Pós-Graduação em Produção Vegetal, Universidade Federal do Tocantins, Campus Universitário de Gurupi, 77402-970 Gurupi, Tocantins, Brazil
| | - Carlos Gravato
- Faculdade de Ciências & CESAM, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
| | - Andreia C M Rodrigues
- Departamento de Biologia & CESAM, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
| | - Diana Campos
- Departamento de Biologia & CESAM, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
| | - Fátima C P Simão
- Departamento de Biologia & CESAM, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal
| | - Amadeu M V M Soares
- Departamento de Biologia & CESAM, Universidade de Aveiro, Campus Universitário de Santiago, 3810-193 Aveiro, Portugal.
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25
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Kim IV, Riedelbauch S, Kuhn CD. The piRNA pathway in planarian flatworms: new model, new insights. Biol Chem 2020; 401:1123-1141. [DOI: 10.1515/hsz-2019-0445] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2019] [Accepted: 03/12/2020] [Indexed: 12/22/2022]
Abstract
AbstractPIWI-interacting RNAs (piRNAs) are small regulatory RNAs that associate with members of the PIWI clade of the Argonaute superfamily of proteins. piRNAs are predominantly found in animal gonads. There they silence transposable elements (TEs), regulate gene expression and participate in DNA methylation, thus orchestrating proper germline development. Furthermore, PIWI proteins are also indispensable for the maintenance and differentiation capabilities of pluripotent stem cells in free-living invertebrate species with regenerative potential. Thus, PIWI proteins and piRNAs seem to constitute an essential molecular feature of somatic pluripotent stem cells and the germline. In keeping with this hypothesis, both PIWI proteins and piRNAs are enriched in neoblasts, the adult stem cells of planarian flatworms, and their presence is a prerequisite for the proper regeneration and perpetual tissue homeostasis of these animals. The piRNA pathway is required to maintain the unique biology of planarians because, in analogy to the animal germline, planarian piRNAs silence TEs and ensure stable genome inheritance. Moreover, planarian piRNAs also contribute to the degradation of numerous protein-coding transcripts, a function that may be critical for neoblast differentiation. This review gives an overview of the planarian piRNA pathway and of its crucial function in neoblast biology.
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Affiliation(s)
- Iana V. Kim
- Gene regulation by Non-coding RNA, Elite Network of Bavaria and University of Bayreuth, Universitätsstrasse 30, D-95447 Bayreuth, Germany
| | - Sebastian Riedelbauch
- Gene regulation by Non-coding RNA, Elite Network of Bavaria and University of Bayreuth, Universitätsstrasse 30, D-95447 Bayreuth, Germany
| | - Claus-D. Kuhn
- Gene regulation by Non-coding RNA, Elite Network of Bavaria and University of Bayreuth, Universitätsstrasse 30, D-95447 Bayreuth, Germany
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26
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Rozanski A, Moon H, Brandl H, Martín-Durán JM, Grohme MA, Hüttner K, Bartscherer K, Henry I, Rink JC. PlanMine 3.0-improvements to a mineable resource of flatworm biology and biodiversity. Nucleic Acids Res 2020; 47:D812-D820. [PMID: 30496475 PMCID: PMC6324014 DOI: 10.1093/nar/gky1070] [Citation(s) in RCA: 88] [Impact Index Per Article: 22.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2018] [Accepted: 11/26/2018] [Indexed: 12/11/2022] Open
Abstract
Flatworms (Platyhelminthes) are a basally branching phylum that harbours a wealth of fascinating biology, including planarians with their astonishing regenerative abilities and the parasitic tape worms and blood flukes that exert a massive impact on human health. PlanMine (http://planmine.mpi-cbg.de/) has the mission objective of providing both a mineable sequence repository for planarians and also a resource for the comparative analysis of flatworm biology. While the original PlanMine release was entirely based on transcriptomes, the current release transitions to a more genomic perspective. Building on the recent availability of a high quality genome assembly of the planarian model species Schmidtea mediterranea, we provide a gene prediction set that now assign existing transcripts to defined genomic coordinates. The addition of recent single cell and bulk RNA-seq datasets greatly expands the available gene expression information. Further, we add transcriptomes from a broad range of other flatworms and provide a phylogeny-aware interface that makes evolutionary species comparisons accessible to non-experts. At its core, PlanMine continues to utilize the powerful InterMine framework and consistent data annotations to enable meaningful inter-species comparisons. Overall, PlanMine 3.0 thus provides a host of new features that makes the fascinating biology of flatworms accessible to the wider research community.
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Affiliation(s)
- Andrei Rozanski
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany
| | - HongKee Moon
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany
| | - Holger Brandl
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany
| | - José M Martín-Durán
- Queen Mary University of London, School of Biological and Chemical Sciences, Mile End Road, Fogg Building, E1 4NS London, UK
| | - Markus A Grohme
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany
| | - Katja Hüttner
- Max Planck Institute for Molecular Biomedicine, Röntgenstraße 20, 48149 Münster, Germany
| | - Kerstin Bartscherer
- Max Planck Institute for Molecular Biomedicine, Röntgenstraße 20, 48149 Münster, Germany.,The Hubrecht Institute for Developmental Biology and Stem Cell Research, Uppsalalaan 8, Utrecht, The Netherlands
| | - Ian Henry
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany
| | - Jochen C Rink
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany
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27
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Wang B, Li D, Yuan Z, Zhang Y, Ma X, Lv Z, Xiao Y, Zhang J. Evaluation of joint effects of perfluorooctane sulfonate and wood vinegar on planarians, Dugesia japonica. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:18089-18098. [PMID: 32170611 DOI: 10.1007/s11356-020-08342-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2019] [Accepted: 03/05/2020] [Indexed: 05/15/2023]
Abstract
Perfluorooctane sulfonate (PFOS) is a persistent organic pollutant and can cause oxidative stress in animals. Wood vinegar (WV) is the water condensate of smoke produced during wood carbonization. It was used for antibacterial application, pest control, and antioxidant. In the study, PFOS and WV were used to treat the planarian, and then the oxidative stress induced by PFOS on the planarian (Dugesia japonica) and the protective effects of WV on lipid peroxidation, related antioxidant enzyme activity, and mRNA expression in the planarian were studied. PFOS caused an increase in malondialdehyde (MDA) contents, a decrease in superoxide dismutase (SOD) and catalase (CAT) activities, and a change in glutathione peroxidase (GPx), glutathione S-transferase (GST), glutathione reductase (GR) activities. The mRNA levels of glutathione peroxidase gene (gpx), glutathione S-transferase enzyme gene (gst), and glutathione reductase gene (gr) are upregulated or downregulated to varying degrees. The WV and co-treatment planarians reduced MDA levels, increased the activities of oxidative stress biomarker enzymes, and restored gene expression levels. Our results show that low concentration of WV has protective effects on the oxidative damage caused by PFOS in the planarian.
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Affiliation(s)
- Bin Wang
- School of Life Sciences, Shandong University of Technology, Zibo, 255000, Shandong, China
| | - Danping Li
- School of Life Sciences, Shandong University of Technology, Zibo, 255000, Shandong, China
| | - Zuoqing Yuan
- School of Life Sciences, Shandong University of Technology, Zibo, 255000, Shandong, China
| | - Yuejie Zhang
- School of Life Sciences, Shandong University of Technology, Zibo, 255000, Shandong, China
| | - Xue Ma
- School of Life Sciences, Shandong University of Technology, Zibo, 255000, Shandong, China
| | - Ziheng Lv
- School of Life Sciences, Shandong University of Technology, Zibo, 255000, Shandong, China
| | - Yu Xiao
- School of Life Sciences, Shandong University of Technology, Zibo, 255000, Shandong, China
| | - Jianyong Zhang
- School of Life Sciences, Shandong University of Technology, Zibo, 255000, Shandong, China.
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28
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Fields C, Levin M. Does regeneration recapitulate phylogeny? Planaria as a model of body-axis specification in ancestral eumetazoa. Commun Integr Biol 2020; 13:27-38. [PMID: 32128026 PMCID: PMC7039665 DOI: 10.1080/19420889.2020.1729601] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2019] [Revised: 02/07/2020] [Accepted: 02/09/2020] [Indexed: 12/31/2022] Open
Abstract
Metazoan body plans combine well-defined primary, secondary, and in many bilaterians, tertiary body axes with structural asymmetries at multiple scales. Despite decades of study, how axis-defining symmetries and system-defining asymmetries co-emerge during both evolution and development remain open questions. Regeneration studies in asexual planaria have demonstrated an array of viable forms with symmetrized and, in some cases, duplicated body axes. We suggest that such forms may point toward an ancestral eumetazoan form with characteristics of both cnidarians and placazoa.
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Affiliation(s)
| | - Michael Levin
- Allen Discovery Center, Tufts University, Medford, MA, USA
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29
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Scott KY, Matthew R, Woolcock J, Silva M, Lemieux H. Adjustments in the control of mitochondrial respiratory capacity to tolerate temperature fluctuations. ACTA ACUST UNITED AC 2019; 222:jeb.207951. [PMID: 31439652 DOI: 10.1242/jeb.207951] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Accepted: 08/14/2019] [Indexed: 12/19/2022]
Abstract
As the world's climate changes, life faces an evolving thermal environment. Mitochondrial oxidative phosphorylation (OXPHOS) is critical to ensure sufficient cellular energy production, and it is strongly influenced by temperature. The thermally induced changes to the regulation of specific steps within the OXPHOS process are poorly understood. In our study, we used the eurythermal species of planarian Dugesia tigrina to study the thermal sensitivity of the OXPHOS process at 10, 15, 20, 25 and 30°C. We conducted cold acclimation experiments where we measured the adjustment of specific steps in OXPHOS at two assay temperatures (10 and 20°C) following 4 weeks of acclimation under normal (22°C) or low (5°C) temperature conditions. At the low temperature, the contribution of the NADH pathway to the maximal OXPHOS capacity, in a combined pathway (NADH and succinate), was reduced. There was partial compensation by an increased contribution of the succinate pathway. As the temperature decreased, OXPHOS became more limited by the capacity of the phosphorylation system. Acclimation to the low temperature resulted in positive adjustments of the NADH pathway capacity due, at least in part, to an increase in complex I activity. The acclimation also resulted in a better match between OXPHOS and phosphorylation system capacities. Both of these adjustments following acclimation were specific to the low assay temperature. We conclude that there is substantial plasticity in the mitochondrial OXPHOS process following thermal acclimation in D. tigrina, and this probably contributes to the wide thermal range of the species.
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Affiliation(s)
- Katrina Y Scott
- Faculty Saint-Jean, University of Alberta, Edmonton, AB, Canada, T6C 4G9
| | - Rebecca Matthew
- Faculty Saint-Jean, University of Alberta, Edmonton, AB, Canada, T6C 4G9
| | - Jennifer Woolcock
- Faculty Saint-Jean, University of Alberta, Edmonton, AB, Canada, T6C 4G9
| | - Maise Silva
- Faculty Saint-Jean, University of Alberta, Edmonton, AB, Canada, T6C 4G9.,Faculdade de Tecnologia e Ciências, Salvador, Bahia, 41741-590, Brazil
| | - Hélène Lemieux
- Faculty Saint-Jean, University of Alberta, Edmonton, AB, Canada, T6C 4G9 .,Department of Medicine, Women and Children's Health Research Institute, University of Alberta, Edmonton, AB, Canada, T6G 2R7
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30
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Ivankovic M, Haneckova R, Thommen A, Grohme MA, Vila-Farré M, Werner S, Rink JC. Model systems for regeneration: planarians. Development 2019; 146:146/17/dev167684. [PMID: 31511248 DOI: 10.1242/dev.167684] [Citation(s) in RCA: 59] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Abstract
Planarians are a group of flatworms. Some planarian species have remarkable regenerative abilities, which involve abundant pluripotent adult stem cells. This makes these worms a powerful model system for understanding the molecular and evolutionary underpinnings of regeneration. By providing a succinct overview of planarian taxonomy, anatomy, available tools and the molecular orchestration of regeneration, this Primer aims to showcase both the unique assets and the questions that can be addressed with this model system.
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Affiliation(s)
- Mario Ivankovic
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany
| | - Radmila Haneckova
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany.,Department of Tissue Dynamics and Regeneration, Max Planck Institute for Biophysical Chemistry, am Fassberg 11, 37077 Göttingen, Germany
| | - Albert Thommen
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany.,The Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK
| | - Markus A Grohme
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany
| | - Miquel Vila-Farré
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany.,Department of Tissue Dynamics and Regeneration, Max Planck Institute for Biophysical Chemistry, am Fassberg 11, 37077 Göttingen, Germany
| | - Steffen Werner
- FOM Institute AMOLF, Department of Systems Biology, Science Park 104, 1098 XG, Amsterdam, The Netherlands
| | - Jochen C Rink
- Max Planck Institute for Molecular Cell Biology and Genetics, Pfotenhauerstrasse 108, 01307 Dresden, Germany .,Department of Tissue Dynamics and Regeneration, Max Planck Institute for Biophysical Chemistry, am Fassberg 11, 37077 Göttingen, Germany
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