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Tischer M, Bleidorn C. Further evidence of low infection frequencies of Wolbachia in soil arthropod communities. INFECTION, GENETICS AND EVOLUTION : JOURNAL OF MOLECULAR EPIDEMIOLOGY AND EVOLUTIONARY GENETICS IN INFECTIOUS DISEASES 2024; 123:105641. [PMID: 39004260 DOI: 10.1016/j.meegid.2024.105641] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2024] [Revised: 06/22/2024] [Accepted: 07/11/2024] [Indexed: 07/16/2024]
Abstract
Endosymbiotic Alphaproteobacteria of the genus Wolbachia are exclusively transferred maternally from mother to offspring, but horizontal transfer across species boundaries seems to be frequent as well. However, the (ecological) mechanisms of how these bacteria are transferred between distantly related arthropod hosts remain unclear. Based on the observation that species that are part of the same ecological community often also share similar Wolbachia strains, host ecology has been hypothesized as an important factor enabling transmission and a key factor in explaining the global distribution of Wolbachia lineages. In this study, we focus on the diversity and abundance of Wolbachia strains in soil arthropods, a so far rather neglected community. We screened 82 arthropod morphotypes collected in the beech forest (dominated by Fagus sp.) soil in the area of Göttingen in central Germany for the presence of Wolbachia. By performing a PCR screen with Wolbachia-MLST markers (coxA, dnaA, fbpA, ftsZ, gatB, and hcpA), we found a rather low infection frequency of 12,2%. Additionally, we performed metagenomic screening of pooled individuals from the same sampling site and could not find evidence that this low infection frequency is an artefact due to PCR-primer bias. Phylogenetic analyses of the recovered Wolbachia strains grouped them in three known supergroups (A, B, and E), with the first report of Wolbachia in Protura (Hexapoda). Moreover, Wolbachia sequences from the pseudoscorpion Neobisium carcinoides cluster outside the currently known supergroup diversity. Our screening supports results from previous studies that the prevalence of Wolbachia infections seems to be lower in soil habitats than in above-ground terrestrial habitats. The reasons for this pattern are not completely understood but might stem from the low opportunity of physical contact and the prevalence of supergroups that are less suited for horizontal transfer.
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Affiliation(s)
- Marta Tischer
- Department for Animal Evolution and Biodiversity, Johann-Friedrich-Blumenbach-Institut für Zoologie und Anthropologie, Georg-August-Universität Göttingen, Untere Karspüle 2, 37073 Göttingen, Germany.
| | - Christoph Bleidorn
- Department for Animal Evolution and Biodiversity, Johann-Friedrich-Blumenbach-Institut für Zoologie und Anthropologie, Georg-August-Universität Göttingen, Untere Karspüle 2, 37073 Göttingen, Germany.
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Cen J, Lu S, Moestrup Ø, Jiang T, Ho KC, Li S, Li M, Huan Q, Wang J. Five Karenia species along the Chinese coast: With the description of a new species, Karenia hui sp. nov. (Kareniaceae, Dinophyta). HARMFUL ALGAE 2024; 137:102645. [PMID: 39003019 DOI: 10.1016/j.hal.2024.102645] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2024] [Revised: 05/05/2024] [Accepted: 05/12/2024] [Indexed: 07/15/2024]
Abstract
Dinoflagellates within the genus Karenia are well known for their potential to cause harmful algal blooms and induce detrimental ecological consequences. In this study, five Karenia species, Karenia longicanalis, Karenia papilionacea, Karenia mikimotoi, Karenia selliformis, and a new species, Karenia hui sp. nov., were isolated from Chinese coastal waters. The new species exhibits the typical characteristics of the genus Karenia, including a linear apical groove and butanoyl-oxyfucoxanthin as the major accessory pigment. It is distinguished from the other Karenia species by a wide-open sulcal intrusion onto the epicone, a conical epicone with an apical crest formed by the rim of the apical groove, and a hunchbacked hypocone. It is most closely related to Karenia cristata, with a genetic divergence of 3.16 % (22 bp out of 883 bp of LSU rDNA). Acute toxicity tests indicated that the five Karenia species from China are all toxic to marine medaka Oryzias melastigma. Karenia selliformis and K. hui were very toxic to O. melastigma, resulting in 100 % mortality within 4 h and 24 h, respectively. Further analysis by high-performance liquid chromatography revealed that four species, K. selliformis, K. longicanalis, K. papilionacea and K. mikimotoi were capable of producing Gymnodimine-A (GYM-A). The highest GYM-A content was in K. selliformis (strain HK-43), in which the value was 889 fg/cell. No GYM-A was detected in the new species K. hui, however and its toxin remains unknown. Below we provide a comprehensive report of the morphology, phylogeny, pigment composition, and toxicity profiles of Karenia species along the Chinese coast. These findings contribute new insights for monitoring of Karenia species, with important toxicological and ecological implications.
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Affiliation(s)
- Jingyi Cen
- Research Center of Harmful Algae and Marine Biology, Jinan University, Guangzhou 510632, PR China
| | - Songhui Lu
- Research Center of Harmful Algae and Marine Biology, Jinan University, Guangzhou 510632, PR China; Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai 519000, PR China
| | - Øjvind Moestrup
- Marine Biological Section, Department of Biology, University of Copenhagen, Universitetsparken 4, DK-2100 Copenhagen Ø, Denmark
| | - Tao Jiang
- School of Ocean, Yantai University, Yantai 264005, PR China
| | - Kin Chung Ho
- Department of Geography, The University of Hong Kong, Hong Kong 999077, PR China
| | - Si Li
- Research Center of Harmful Algae and Marine Biology, Jinan University, Guangzhou 510632, PR China
| | - Mingmin Li
- Beibu Gulf Marine Ecological Environment Field Observation and Research Station of Guangxi, Beihai 536000, PR China
| | - Qingliu Huan
- Shenzhen Holly Technology Co., LTD, Shenzhen 518000, PR China
| | - Jianyan Wang
- Department of Life Sciences, National Natural History Museum of China, Beijing 100050, PR China.
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Zheng D, Zou L, Zou J, Li Q, Lu S. Refining taxonomic identification of microalgae through molecular and genetic evolution: a case study of Prorocentrum lima and Prorocentrum arenarium. Microbiol Spectr 2024; 12:e0236723. [PMID: 38572997 PMCID: PMC11064606 DOI: 10.1128/spectrum.02367-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Accepted: 02/08/2024] [Indexed: 04/05/2024] Open
Abstract
Species delimitation based on lineage definition has become increasingly popular. However, these methods have been limited, especially for species that lack genomic data and are morphologically similar. The trickiest part for the species identification is that the interspecific and intraspecific boundaries are vague. Taking Prorocentrum (Dinophyta) as an example, analysis of cell morphology, growth, and toxin synthesis in both species of P. lima and P. arenarium does not provide a reliable basis for species delineation. However, through phylogenetic and genetic distance analyses of their ITS and LSU sequences, establishment of evolutionary tree based on orthologous gene sequences, and combining the results of automatic barcode gap discovery and Poisson tree processes models, it was sustained that P. arenarium does not belong to the P. lima complex and should be considered as an independent species. Interspecies genetic evolution analysis revealed that P. lima and P. arenarium may contribute to evolutionary direction that favors combating reverse environmental factors. In P. lima, viral invasion may be one of the reasons for its large genome size. In the study, P. lima complex has been selected as an example to enhance the taxonomic identification of microalgae through molecular and genetic evolution, offering valuable insights into refining taxonomic identification and promoting microbial biodiversity research in other species.IMPORTANCEMicroalgae, especially the species known as Prorocentrum, have received significant attention due to their ability to trigger harmful algal blooms and produce toxins. However, the boundaries between species and within species are ambiguous. Clear and comprehensive species delineation indicates that Prorocentrum arenarium should be considered as an independent species, separate from the Prorocentrum lima complex. Improving the classification and identification of microalgae through molecular and genetic evolution will provide reference points for other cryptic species. Prorocentrum occupy multiple ecological niches in marine environments, and studying their evolutionary direction contributes to understanding their ecological adaptations and community succession.
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Affiliation(s)
- Danlin Zheng
- College of Life Science and Technology, and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Jinan University, Guangzhou, China
| | - Ligong Zou
- College of Life Science and Technology, and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Jinan University, Guangzhou, China
| | - Jian Zou
- College of Life Science and Technology, and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Jinan University, Guangzhou, China
| | - Qun Li
- College of Life Science and Technology, and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Jinan University, Guangzhou, China
| | - Songhui Lu
- College of Life Science and Technology, and Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Jinan University, Guangzhou, China
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Fernández-Valero AD, Karpov SA, Sampedro N, Gordi J, Timoneda N, Garcés E, Reñé A. Newly identified diversity of Dinomycetaceae (Rhizophydiales, Chytridiomycota), a family of fungal parasites of marine dinoflagellates. Eur J Protistol 2024; 93:126053. [PMID: 38350179 DOI: 10.1016/j.ejop.2024.126053] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2023] [Revised: 01/22/2024] [Accepted: 01/23/2024] [Indexed: 02/15/2024]
Abstract
We identified two new parasite species of Chytridiomycota isolated during blooms of the dinoflagellate Alexandrium minutum in the coastal Mediterranean Sea. Light and electron microscopy together with molecular characterization of the nuclear 18S, ITS, and 28S rDNA regions led to their identification as two new species, Dinomyces gilberthii and Paradinomyces evelyniae, both belonging to the family Dinomycetaceae, order Rhizophydiales. Dinomyces gilberthii differs from the previously described D. arenysensis by the presence of discharge papillae and the development of a drop-shaped sporangium. Paradinomyces evelyniae differs from the previously described P. triforaminorum by the prominent lipid globule present in early sporangia and by the pointed end producing a rhizoid. The two chytrids differed in their geographical distribution. Dinomyces gilberthii was detected in several Mediterranean habitats, including harbours and beaches, and was particularly prevalent during summer dinoflagellate blooms. Its widespread occurrence in coastal ecosystems suggested a high level of adaptability to this environment. Paradinomyces evelyniae had a more restricted distribution in the coastal-marine environment, occurring in harbour sediments and only occasionally in the water column during winter and early spring. Paradinomyces evelyniae has previously been detected in the Baltic Sea, suggesting that its distribution encompasses contrasting coastal environments, although its presence is rare.
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Affiliation(s)
- Alan Denis Fernández-Valero
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Pg. Marítim de la Barceloneta, 37-49, 08003 Barcelona, Catalonia, Spain.
| | - Sergey A Karpov
- Department of Invertebrate Zoology, Biological Faculty, St Petersburg State University, Universitetskaya nab. 7/9, St Petersburg 199034, Russia; Zoological Institute of Russian Academy of Sciences, Universitetskaya nab. 1, St Petersburg 199034, Russia; North-Western State Medical University named after I.I. Mechnikov, Kirochnaya st. 41, St Petersburg 191015, Russia
| | - Nagore Sampedro
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Pg. Marítim de la Barceloneta, 37-49, 08003 Barcelona, Catalonia, Spain
| | - Jordina Gordi
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Pg. Marítim de la Barceloneta, 37-49, 08003 Barcelona, Catalonia, Spain
| | - Natàlia Timoneda
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Pg. Marítim de la Barceloneta, 37-49, 08003 Barcelona, Catalonia, Spain
| | - Esther Garcés
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Pg. Marítim de la Barceloneta, 37-49, 08003 Barcelona, Catalonia, Spain
| | - Albert Reñé
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Pg. Marítim de la Barceloneta, 37-49, 08003 Barcelona, Catalonia, Spain
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Jeon BS, Park MG. Morphology, phylogeny, and host range of the novel early-diverging oomycete Sirolpidium dinoletiferum sp. nov. parasitizing marine dinoflagellates. HARMFUL ALGAE 2024; 132:102567. [PMID: 38331547 DOI: 10.1016/j.hal.2024.102567] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2023] [Revised: 12/29/2023] [Accepted: 01/02/2024] [Indexed: 02/10/2024]
Abstract
Oomycetes are fungus-like heterotrophic organisms with a broad environmental distribution, including marine, freshwater, and terrestrial habitats. They function as saprotrophs that use the remains of other organisms or as parasites of a variety of eukaryotes, including protists, diatoms, dinoflagellates, macroalgae, plants, fungi, animals, and even other oomycetes. Among the protist hosts, the taxonomy, morphology, and phylogenetic positions of the oomycete parasitoids of diatoms have been well studied; however, this information concerning the oomycete parasitoids of dinoflagellates is poorly understood. During intensive sampling along the east and west coasts of Korea in May and October 2019, a new species of oomycetes was discovered and two strains of the new parasitoid were successfully established in cultures. The new oomycete parasitoid penetrated the dinoflagellate host cell and developed to form a sporangium, which was very similar to the perkinsozoan parasitoids that infect marine dinoflagellates. The most distinctive morphological feature of the new parasitoid was a central large vacuole forming several long discharge tubes. The molecular phylogenetic tree inferred based on the small subunit (SSU) ribosomal DNA (rDNA) revealed that the new parasitoid forms a distinct branch unrelated to other described species belonging to early-diverging oomycetes. It clustered with species belonging to the genus Sirolpidium with strong support values in the cytochrome c oxidase subunit 2 (cox2) tree. Cross-infection experiments showed that infections by the new parasitoid occurred in only six genera belonging to dinoflagellates among the protists tested in this study. Based on the morphological and molecular data obtained in this study, we propose to introduce a new species, Sirolpidium dinoletiferum sp. nov., for this novel parasitoid, conservatively within the genus Sirolpidium.
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Affiliation(s)
- Boo Seong Jeon
- Research Institute for Basic Sciences, Chonnam National University, Gwangju 61186, Korea
| | - Myung Gil Park
- LOHABE, Department of Oceanography, Chonnam National University, Gwangju 61186, Korea.
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Ibghi M, Rijal Leblad B, L’Bachir El Kbiach M, Aboualaalaa H, Daoudi M, Masseret E, Le Floc’h E, Hervé F, Bilien G, Chomerat N, Amzil Z, Laabir M. Molecular Phylogeny, Morphology, Growth and Toxicity of Three Benthic Dinoflagellates Ostreopsis sp. 9, Prorocentrum lima and Coolia monotis Developing in Strait of Gibraltar, Southwestern Mediterranean. Toxins (Basel) 2024; 16:49. [PMID: 38251265 PMCID: PMC10819257 DOI: 10.3390/toxins16010049] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2023] [Revised: 01/11/2024] [Accepted: 01/12/2024] [Indexed: 01/23/2024] Open
Abstract
Few works have been carried out on benthic harmful algal blooms (BHAB) species in the southern Mediterranean and no data are available for the highly dynamic Strait of Gibraltar (western Mediterranean waters). For the first time, Ostreopsis sp. 9, Prorocentrum lima and Coolia monotis were isolated in this key region in terms of exchanges between the Atlantic Ocean and the Mediterranean and subject to intense maritime traffic. Ribotyping confirmed the morphological identification of these three dinoflagellates species. Monoclonal cultures were established and the maximum growth rate and cell yield were measured at a temperature of 24 °C and an irradiance of 90 µmol photons m-2 s-1, for each species: 0.26 ± 0.02 d-1 (8.75 × 103 cell mL-1 after 28 days) for Ostreopsis sp. 9, 0.21 ± 0.01 d-1 (49 × 103 cell mL-1 after 145 days) for P. lima and 0.21 ± 0.01 d-1 (10.02 × 103 cell mL-1 after 28 days) for C. monotis. Only P. lima was toxic with concentrations of okadaic acid and dinophysistoxin-1 measured in optimal growth conditions ranging from 6.4 pg cell-1 to 26.97 pg cell-1 and from 5.19 to 25.27 pg cell-1, respectively. The toxin content of this species varied in function of the growth phase. Temperature influenced the growth and toxin content of P. lima. Results suggest that future warming of Mediterranean coastal waters may lead to higher growth rates and to increases in cellular toxin levels in P. lima. Nitrate and ammonia affected the toxin content of P. lima but no clear trend was noted. In further studies, we have to isolate other BHAB species and strains from Strait of Gibraltar waters to obtain more insight into their diversity and toxicity.
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Affiliation(s)
- Mustapha Ibghi
- Marine Environment Monitoring Laboratory, INRH (Moroccan Institute of Fisheries Research), Tangier 90000, Morocco; (M.I.); (H.A.); (M.D.)
- Equipe de Biotechnologie Végétale, Faculty of Sciences, Abdelmalek Essaadi University Tetouan, Tetouan 93000, Morocco;
- MARBEC, University of Montpellier, CNRS, IRD, Ifremer, 34095 Montpellier, France; (E.M.); (E.L.F.)
| | - Benlahcen Rijal Leblad
- Marine Environment Monitoring Laboratory, INRH (Moroccan Institute of Fisheries Research), Tangier 90000, Morocco; (M.I.); (H.A.); (M.D.)
| | - Mohammed L’Bachir El Kbiach
- Equipe de Biotechnologie Végétale, Faculty of Sciences, Abdelmalek Essaadi University Tetouan, Tetouan 93000, Morocco;
| | - Hicham Aboualaalaa
- Marine Environment Monitoring Laboratory, INRH (Moroccan Institute of Fisheries Research), Tangier 90000, Morocco; (M.I.); (H.A.); (M.D.)
- Equipe de Biotechnologie Végétale, Faculty of Sciences, Abdelmalek Essaadi University Tetouan, Tetouan 93000, Morocco;
- MARBEC, University of Montpellier, CNRS, IRD, Ifremer, 34095 Montpellier, France; (E.M.); (E.L.F.)
| | - Mouna Daoudi
- Marine Environment Monitoring Laboratory, INRH (Moroccan Institute of Fisheries Research), Tangier 90000, Morocco; (M.I.); (H.A.); (M.D.)
| | - Estelle Masseret
- MARBEC, University of Montpellier, CNRS, IRD, Ifremer, 34095 Montpellier, France; (E.M.); (E.L.F.)
| | - Emilie Le Floc’h
- MARBEC, University of Montpellier, CNRS, IRD, Ifremer, 34095 Montpellier, France; (E.M.); (E.L.F.)
| | - Fabienne Hervé
- Laboratoire Phycotoxines, IFREMER (French Research Institute for Exploitation of the Sea)/PHYTOX/METALG, 44311 Nantes, France; (F.H.); (Z.A.)
| | - Gwenael Bilien
- IFREMER, Unité Littoral, Station de Biologie Marine, Place de la Croix, 29185 Concarneau, France; (G.B.); (N.C.)
| | - Nicolas Chomerat
- IFREMER, Unité Littoral, Station de Biologie Marine, Place de la Croix, 29185 Concarneau, France; (G.B.); (N.C.)
| | - Zouher Amzil
- Laboratoire Phycotoxines, IFREMER (French Research Institute for Exploitation of the Sea)/PHYTOX/METALG, 44311 Nantes, France; (F.H.); (Z.A.)
| | - Mohamed Laabir
- MARBEC, University of Montpellier, CNRS, IRD, Ifremer, 34095 Montpellier, France; (E.M.); (E.L.F.)
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Luostarinen T, Ribeiro S, Zimmermann HH, Kvorning AB, Heikkilä M. Single-cell DNA from West Greenland marine sediments suggests presence of Protoperidinium tricingulatum in the Arctic. J Eukaryot Microbiol 2024; 71:e13005. [PMID: 37877451 DOI: 10.1111/jeu.13005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Revised: 09/11/2023] [Accepted: 10/02/2023] [Indexed: 10/26/2023]
Abstract
Spiny brown dinoflagellate cysts are commonly used as sea-ice indicators in the Arctic, but their biological affinities are not well known. We present the first indication of hitherto temperate Protoperidinium tricingulatum in the Arctic based on single-cell LSU rDNA sequencing from sediments of the Disko Bay-Vaigat Sound, West Greenland. The morphological similarity of the sequenced cyst morphotype to the sea-ice indicator Islandinium? cezare morphotype 1 is striking. The morphology of the isolated cysts, as well as those observed in the total cyst assemblage following standard palynological preparation, both resemble either I.? cezare morphotype 1 or P. tricingulatum, suggesting that the specimens may in fact be close morphological variants of the same species. In addition, nine LSU rDNA sequences were obtained from morphological variants assigned to Islandinium minutum s.l.: including both subspecies minutum and subspecies barbatum. The two subspecies could not be differentiated based on partial LSU rDNA sequencing. Overall, Arctic spiny brown dinoflagellate cyst species may be morphologically more diverse and taxonomically more complex than shown earlier and further genetic and morphological studies are needed. Importantly, the value of cysts as palaeoecological indicators depends on a sound understanding of their biological affinity and taxonomy.
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Affiliation(s)
- Tiia Luostarinen
- Environmental Change Research Unit (ECRU), Ecosystems and Environment Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
- Helsinki Institute of Sustainability Science (HELSUS), University of Helsinki, Helsinki, Finland
| | - Sofia Ribeiro
- Department of Glaciology and Climate, Geological Survey of Denmark and Greenland (GEUS), Copenhagen, Denmark
| | - Heike H Zimmermann
- Department of Glaciology and Climate, Geological Survey of Denmark and Greenland (GEUS), Copenhagen, Denmark
| | - Anna B Kvorning
- Department of Glaciology and Climate, Geological Survey of Denmark and Greenland (GEUS), Copenhagen, Denmark
| | - Maija Heikkilä
- Environmental Change Research Unit (ECRU), Ecosystems and Environment Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland
- Helsinki Institute of Sustainability Science (HELSUS), University of Helsinki, Helsinki, Finland
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Polaszek A, Noyes JS, Lugli EB, Schmaedick MA, Peck RW, Banko PC, Fusu L. Ooencyrtus pitosina (Hymenoptera: Encyrtidae)-A natural enemy of Samoan swallowtail butterfly Papilio godeffroyi (Lepidoptera: Papilionidae). PLoS One 2023; 18:e0288306. [PMID: 37556463 PMCID: PMC10411748 DOI: 10.1371/journal.pone.0288306] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2023] [Accepted: 06/16/2023] [Indexed: 08/11/2023] Open
Abstract
A new species of encyrtid wasp, Ooencyrtus pitosina Polaszek, Noyes & Fusu sp. n., (Hymenoptera: Encyrtidae: Encyrtinae) is described as a gregarious parasitoid in the eggs of the endemic Samoan swallowtail butterfly Papilio godeffroyi (Lepidoptera: Papilionidae) in the Samoan archipelago. It is described here because it is an important natural enemy of this butterfly, and to facilitate identification for future work with this parasitoid and its host.
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Affiliation(s)
| | - John S. Noyes
- Natural History Museum, London, England, United Kingdom
| | - Elena B. Lugli
- Core Research Laboratories, Natural History Museum, London, England, United Kingdom
| | - Mark A. Schmaedick
- Division of Agriculture, Community and Natural Resources, American Samoa Community College, Pago Pago, American Samoa
| | - Robert W. Peck
- Hawai‘i Cooperative Studies Unit, University of Hawai‘i at Hilo, Hilo, Hawai‘i, United States of America
| | - Paul C. Banko
- U.S. Geological Survey, Pacific Island Ecosystems Research Center, Kilauea Field Station, Hawai’i, United States of America
| | - Lucian Fusu
- Research Group in Invertebrate Diversity and Phylogenetics, Al. I. Cuza University, Faculty of Biology, Iasi, Romania
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9
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Borsato GT, Salgueiro F, De'Carli GAL, Morais AM, Goulart AS, de Paula JC, Nascimento SM. Taxonomy and abundance of epibenthic Prorocentrum (Dinophyceae) species from the tropical and subtropical Southwest Atlantic Ocean including a review of their global diversity and distribution. HARMFUL ALGAE 2023; 127:102470. [PMID: 37544670 DOI: 10.1016/j.hal.2023.102470] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2022] [Revised: 03/30/2023] [Accepted: 06/07/2023] [Indexed: 08/08/2023]
Abstract
In the tropical and subtropical South Atlantic Ocean, studies on the taxonomy and abundance of benthic harmful algae are scarce and the region has been largely under investigated. In this study, morphological descriptions, molecular (LSU rDNA and ITS region) and abundance data of benthic Prorocentrum species from the tropical and subtropical Southwest Atlantic and three oceanic islands are presented. Moreover, a review of global benthic Prorocentrum species richness and distribution is presented. Eleven benthic Prorocentrum species were found in Brazil. Morphological and molecular data on P. borbonicum, P. hoffmannianum, P. lima species complex and P. rhathymum were provided. Prorocentrum panamense, P. cf. caipirignum, P. cf. concavum, P. cf. norrisianum, P. emarginatum/fukuyoi/sculptile complex and two not identified species were observed using scanning electron and/or light microscopy, and morphological descriptions are presented. Prorocentrum lima species complex was found at all investigated sites, in abundances up to 2 × 104 cells g-1 FW at the Northeast Brazil, while maximum abundance of all the remaining species did not exceed 1 × 103 cells g-1 FW. The Fernando de Noronha archipelago can be considered a hotspot of benthic Prorocentrum species diversity, with ten species registered. Data compiled in the literature review shows a clear latitudinal gradient with higher species richness in tropical and subtropical regions relative to temperate areas. It is also evident that there is a bias caused by taxonomic impediment and an uneven sampling effort, with many regions still to be investigated using a combined morphological and molecular effort. Therefore, the current knowledge on the global distribution of benthic Prorocentrum species is likely underestimated.
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Affiliation(s)
- Geovanna Theobald Borsato
- Laboratório de Microalgas Marinhas, Universidade Federal do Estado do Rio de Janeiro - UNIRIO, Av. Pasteur, 458, Urca, Rio de Janeiro, 22290-240, RJ, Brazil
| | - Fabiano Salgueiro
- Laboratório de Biodiversidade e Evolução Molecular, Universidade Federal do Estado do Rio de Janeiro - UNIRIO, Av. Pasteur, 458, Urca, Rio de Janeiro, 22290-240, RJ, Brazil
| | - Gabriela A L De'Carli
- Laboratório de Microalgas Marinhas, Universidade Federal do Estado do Rio de Janeiro - UNIRIO, Av. Pasteur, 458, Urca, Rio de Janeiro, 22290-240, RJ, Brazil
| | - Agatha M Morais
- Laboratório de Microalgas Marinhas, Universidade Federal do Estado do Rio de Janeiro - UNIRIO, Av. Pasteur, 458, Urca, Rio de Janeiro, 22290-240, RJ, Brazil
| | - Amanda S Goulart
- Laboratório de Biodiversidade e Evolução Molecular, Universidade Federal do Estado do Rio de Janeiro - UNIRIO, Av. Pasteur, 458, Urca, Rio de Janeiro, 22290-240, RJ, Brazil
| | - Joel C de Paula
- Laboratório de Biologia e Taxonomia Algal, Universidade Federal do Estado do Rio de Janeiro - UNIRIO, Av. Pasteur, 458, Urca, Rio de Janeiro, 22290-240, RJ, Brazil
| | - Silvia M Nascimento
- Laboratório de Microalgas Marinhas, Universidade Federal do Estado do Rio de Janeiro - UNIRIO, Av. Pasteur, 458, Urca, Rio de Janeiro, 22290-240, RJ, Brazil.
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10
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Ruvindy R, Barua A, Bolch CJS, Sarowar C, Savela H, Murray SA. Genomic copy number variability at the genus, species and population levels impacts in situ ecological analyses of dinoflagellates and harmful algal blooms. ISME COMMUNICATIONS 2023; 3:70. [PMID: 37422553 PMCID: PMC10329664 DOI: 10.1038/s43705-023-00274-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2022] [Revised: 06/18/2023] [Accepted: 06/20/2023] [Indexed: 07/10/2023]
Abstract
The application of meta-barcoding, qPCR, and metagenomics to aquatic eukaryotic microbial communities requires knowledge of genomic copy number variability (CNV). CNV may be particularly relevant to functional genes, impacting dosage and expression, yet little is known of the scale and role of CNV in microbial eukaryotes. Here, we quantify CNV of rRNA and a gene involved in Paralytic Shellfish Toxin (PST) synthesis (sxtA4), in 51 strains of 4 Alexandrium (Dinophyceae) species. Genomes varied up to threefold within species and ~7-fold amongst species, with the largest (A. pacificum, 130 ± 1.3 pg cell-1 /~127 Gbp) in the largest size category of any eukaryote. Genomic copy numbers (GCN) of rRNA varied by 6 orders of magnitude amongst Alexandrium (102- 108 copies cell-1) and were significantly related to genome size. Within the population CNV of rRNA was 2 orders of magnitude (105 - 107 cell-1) in 15 isolates from one population, demonstrating that quantitative data based on rRNA genes needs considerable caution in interpretation, even if validated against locally isolated strains. Despite up to 30 years in laboratory culture, rRNA CNV and genome size variability were not correlated with time in culture. Cell volume was only weakly associated with rRNA GCN (20-22% variance explained across dinoflagellates, 4% in Gonyaulacales). GCN of sxtA4 varied from 0-102 copies cell-1, was significantly related to PSTs (ng cell-1), displaying a gene dosage effect modulating PST production. Our data indicate that in dinoflagellates, a major marine eukaryotic group, low-copy functional genes are more reliable and informative targets for quantification of ecological processes than unstable rRNA genes.
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Affiliation(s)
- Rendy Ruvindy
- University of Technology Sydney, School of Life Sciences, Sydney, PO Box 123, Broadway, NSW, 2007, Australia
| | - Abanti Barua
- University of Technology Sydney, School of Life Sciences, Sydney, PO Box 123, Broadway, NSW, 2007, Australia
| | - Christopher J S Bolch
- Institute for Marine & Antarctic Studies, University of Tasmania, Launceston, 7248, TAS, Australia
| | - Chowdhury Sarowar
- Sydney Institute of Marine Science, Chowder Bay Rd, Mosman, NSW, Australia
| | - Henna Savela
- University of Technology Sydney, School of Life Sciences, Sydney, PO Box 123, Broadway, NSW, 2007, Australia
- Finnish Environment Institute, Marine Research Centre, Helsinki, Finland
| | - Shauna A Murray
- University of Technology Sydney, School of Life Sciences, Sydney, PO Box 123, Broadway, NSW, 2007, Australia.
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11
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Lima JF, Carvalho LS, Carvalho MA, Schneider MC. Chromosome diversity in Buthidae and Chactidae scorpions from Brazilian fauna: Diploid number and distribution of repetitive DNA sequences. Genet Mol Biol 2023; 46:e20220083. [PMID: 37216321 DOI: 10.1590/1678-4685-gmb-2022-0083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2022] [Accepted: 03/23/2023] [Indexed: 05/24/2023] Open
Abstract
In this work, we analyzed cytogenetically eight Chactidae and Buthidae, including the localization of repetitive DNA sequences. The chactids possess monocentric chromosomes and the highest diploid numbers (2n=50 in Brotheas amazonicus, 2n=36 in Chactopsis amazonica, 2n=30 in Neochactas sp.) when compared with buthids (2n=10 in Tityus bahiensis, 2n=14 in Tityus apiacas and Tityus metuendus, 2n=18 in Tityus aba, 2n=26 in Ischnotelson peruassu). The localization of rDNA genes and (TTAGG)n sequences exhibited a conserved pattern of two terminal/subterminal ribosomal cistrons and terminal telomere signals. However, the comparison between the data of C-banding, DAPI after FISH and Cot-DNA fraction indicated a variable quantity and distribution of these regions, as follow: (i) positive heterochromatin and Cot-DNA signals (B. amazonicus and I. peruassu), (ii) small blocks of heterochromatin with large Cot-DNA signals (T. metuendus), (iii) positive heterochromatic regions and absence of Cot-DNA signals (T. aba and T. apiacas), and (iv) negative heterochromatin and Cot-DNA signals (T. bahiensis). Therefore, our results revealed that there still is not a clear relation between quantity of heterochromatin and presence of monocentric or holocentric chromosomes and occurrence of chromosomal rearrangements, indicating that repetitive regions in scorpions must be analyzed using different cytogenetic approaches.
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Affiliation(s)
- Juliana Figueiredo Lima
- Universidade de São Paulo (USP), Instituto de Biociências, Departamento de Zoologia, Programa de Pós-Graduação em Zoologia, São Paulo, SP, Brazil
| | | | - Marcos André Carvalho
- Universidade Federal de Mato Grosso (UFMT), Departamento de Biologia e Zoologia, Cuiabá, MT, Brazil
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12
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Leynse AK, Mudge EM, Turner AD, Maskrey BH, Robertson A. Gambierone and Sodium Channel Specific Bioactivity Are Associated with the Extracellular Metabolite Pool of the Marine Dinoflagellate Coolia palmyrensis. Mar Drugs 2023; 21:md21040244. [PMID: 37103383 PMCID: PMC10143066 DOI: 10.3390/md21040244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 04/04/2023] [Accepted: 04/11/2023] [Indexed: 04/28/2023] Open
Abstract
Tropical epibenthic dinoflagellate communities produce a plethora of bioactive secondary metabolites, including the toxins ciguatoxins (CTXs) and potentially gambierones, that can contaminate fishes, leading to ciguatera poisoning (CP) when consumed by humans. Many studies have assessed the cellular toxicity of causative dinoflagellate species to better understand the dynamics of CP outbreaks. However, few studies have explored extracellular toxin pools which may also enter the food web, including through alternative and unanticipated routes of exposure. Additionally, the extracellular exhibition of toxins would suggest an ecological function and may prove important to the ecology of the CP-associated dinoflagellate species. In this study, semi-purified extracts obtained from the media of a Coolia palmyrensis strain (DISL57) isolated from the U.S. Virgin Islands were assessed for bioactivity via a sodium channel specific mouse neuroblastoma cell viability assay and associated metabolites evaluated by targeted and non-targeted liquid chromatography tandem and high-resolution mass spectrometry. We found that extracts of C. palmyrensis media exhibit both veratrine enhancing bioactivity and non-specific bioactivity. LC-HR-MS analysis of the same extract fractions identified gambierone and multiple undescribed peaks with mass spectral characteristics suggestive of structural similarities to polyether compounds. These findings implicate C. palmyrensis as a potential contributor to CP and highlight extracellular toxin pools as a potentially significant source of toxins that may enter the food web through multiple exposure pathways.
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Affiliation(s)
- Alexander K Leynse
- School of Marine & Environmental Sciences, University of South Alabama, 600 Clinic Drive, Mobile, AL 36688, USA
- Dauphin Island Sea Lab, 101 Bienville Boulevard, Dauphin Island, AL 36528, USA
| | - Elizabeth M Mudge
- National Research Council of Canada, 1411 Oxford Street, Halifax, NS B3M3Z1, Canada
| | - Andrew D Turner
- Center for the Environment, Fisheries, and Aquaculture Science, Barrack Road, Weymouth DT4 8UB, UK
| | - Benjamin H Maskrey
- Center for the Environment, Fisheries, and Aquaculture Science, Barrack Road, Weymouth DT4 8UB, UK
| | - Alison Robertson
- School of Marine & Environmental Sciences, University of South Alabama, 600 Clinic Drive, Mobile, AL 36688, USA
- Dauphin Island Sea Lab, 101 Bienville Boulevard, Dauphin Island, AL 36528, USA
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13
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Yoo J, Coats DW, Kim S. Syndinean dinoflagellates of the genus Euduboscquella are paraphyletic. J Eukaryot Microbiol 2023; 70:e12953. [PMID: 36301231 DOI: 10.1111/jeu.12953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2022] [Revised: 09/21/2022] [Accepted: 10/19/2022] [Indexed: 11/29/2022]
Abstract
Syndinean dinoflagellates of the genus Euduboscquella infect marine ciliates and dinoflagellates. Euduboscquella species infecting dinoflagellates are understudied relative to congeners infecting ciliates and their molecular phylogeny remains uncertain. Morphology, development, and rRNA gene sequences of intracellular parasites infecting heterotrophic dinoflagellates from coastal waters of Busan, Republic of Korea in summer to fall of 2019-2021 indicate that Cucumeridinium coeruleum, Gyrodinium cf. ochraceum, and two unidentified species of Gyrodinium were each infected by a different Euduboscquella species. Morphological features including shield structure, shape and color of the mature trophont, and sporogenic process distinguished each of the four parasites from the 10 previously described species of Euduboscquella. Our molecular and phylogenetic analyses showed considerably greater genetic distance of SSU and ITS-LSU rRNA gene regions among Euduboscquella species infecting dinoflagellates than among those infecting ciliates. Rather than clustering as a group with Euduboscquella species infecting ciliates, SSU rRNA sequences of the four novel parasites spread out across the syndinean Group I phylogeny, occurring in two different clades and a new lineage. Placement of our novel parasites in multiple clades that encompass Ichythyodinium chabelardi strongly indicates that the genus Euduboscquella is paraphyletic.
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Affiliation(s)
- Jiae Yoo
- Major of Oceanography, Division of Earth Environmental System Science, Pukyong National University, Busan, Korea
| | - D Wayne Coats
- Smithsonian Environmental Research Center, Edgewater, Maryland, USA
| | - Sunju Kim
- Major of Oceanography, Division of Earth Environmental System Science, Pukyong National University, Busan, Korea
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14
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Yamaguchi A, Hoppenrath M, Murray S, Kretzschmar AL, Horiguchi T, Wakeman KC. Morphology and molecular phylogeny of the benthic dinoflagellates (Dinophyceae, Peridiniales) Amphidiniopsis crumena n. sp. and Amphidiniopsis nileribanjensis n. sp. Eur J Protistol 2023; 87:125940. [PMID: 36495769 DOI: 10.1016/j.ejop.2022.125940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2022] [Revised: 11/01/2022] [Accepted: 11/02/2022] [Indexed: 11/09/2022]
Abstract
Amphidiniopsis is a benthic, heterotrophic and thecate dinoflagellate genus that has a smaller epitheca and larger hypotheca. The genus contains 24 described species, but is considered to be polyphyletic based on morphological characters and molecular phylogenetics. In this study, two new species were discovered from two distant sampling localities, Amphidiniopsis crumena sp. nov. from Japan, and Amphidiniopsis nileribanjensis sp. nov., from Australia. These species have a uniquely shaped, additional second postcingular plate. Both species are dorsoventrally flattened, an apical hook is present, and have six postcingular plates. The plate formula is: APC 4' 3a 7″ ?C 4?S 6″' 2″″. The cells of these species were examined with LM and SEM, and molecular phylogenic analyses were performed using 18S and 28S rDNA. These species are distinguished by the presence of spines on the hypotheca and touching of the sixth postcingular plate and the anterior sulcal plate. Their shape and disposition of several thecal plates also differ. Molecular phylogenetic analyses showed that the two new species formed a monophyletic clade and did not belong to any morphogroup proposed by previous studies. Considering the morphological features and the molecular phylogenetic results, a new morphogroup is proposed, Amphidiniopsis morphogroup VI ('crumena group').
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Affiliation(s)
- Aika Yamaguchi
- Faculty of Science, Hokkaido University, North 10, West 8, Sapporo 060-0810 Japan.
| | - Mona Hoppenrath
- Senckenberg am Meer, German Centre for Marine Biodiversity Research, Südstrand 44, D-26382 Wilhelmshaven, Germany
| | - Shauna Murray
- University of Technology Sydney, School of Life Sciences, 15 Broadway, Ultimo, NSW 2007, Australia
| | - Anna Liza Kretzschmar
- University of Technology Sydney, School of Life Sciences, 15 Broadway, Ultimo, NSW 2007, Australia; Garvan-Weizmann Centre for Cellular Genomics, Garvan Institute of Medical Research, Sydney, NSW 2010, Australia
| | - Takeo Horiguchi
- Faculty of Science, Hokkaido University, North 10, West 8, Sapporo 060-0810 Japan
| | - Kevin C Wakeman
- Institute for International Collaboration, Hokkaido University, Sapporo 060-0808 Japan
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15
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Arteaga-Sogamoso E, Rodríguez F, Amato A, Ben-Gigirey B, Fraga S, Mafra LL, Fernandes LF, de Azevedo Tibiriçá CEJ, Chomérat N, Nishimura T, Homma C, Adachi M, Mancera-Pineda JE. Morphology and phylogeny of Prorocentrum porosum sp. nov. (Dinophyceae): A new benthic toxic dinoflagellate from the Atlantic and Pacific Oceans. HARMFUL ALGAE 2023; 121:102356. [PMID: 36639183 DOI: 10.1016/j.hal.2022.102356] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 11/04/2022] [Accepted: 11/14/2022] [Indexed: 06/17/2023]
Abstract
A new marine benthic toxic Prorocentrum species is described from the tropical/subtropical regions of the Atlantic (Colombian Caribbean Sea and Northeast Brazil) and Pacific (Southern Japan) oceans. Morphological cell structures were examined using light (LM) and scanning electron (SEM) microscopy. Prorocentrum porosum sp. nov. was characterized by 35.9-50.2 μm long and 25.4-45.7 μm deep cells, covered by broadly ovoid symmetric thecal plates. The surface of both thecal plates is smooth and covered by randomly scattered kidney-shaped pores (n = 102-149), rounder towards the center, absent in the central part, and surrounded by a conspicuous marginal ring of about 69-92 evenly spaced pores. Broad V-shaped periflagellar area exhibiting flagellar and accessory pores. The molecular phylogenetic position of P. porosum sp. nov. was inferred using partial LSU rRNA gene (rDNA) and rDNA ITS sequences. This new species branched with high support in a Prorocentrum clade including P. caipirignum, P. hoffmannianum and P. cf. lima (P. lima morphotype 5 sensuZhang et al., 2015). Pairwise comparison of ITS1 and ITS2 transcripts with these closest relatives revealed the presence of compensatory base changes (CBCs), with the exception of P. cf. lima (P. lima morphotype 5), which only showed in ITS2 a hemi-CBC (HCBC) and two base changes that possibly induce a structural modification. Toxin analyses performed in two Colombian and Brazilian strains in the present study detected the presence of low amounts of okadaic acid.
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Affiliation(s)
- Edgar Arteaga-Sogamoso
- Instituto de Investigaciones Marinas y Costeras José Benito Vives de Andréis, INVEMAR, Santa Marta, Colombia. Calle 25 No. 2-55, Playa Salguero, Rodadero, Santa Marta, Colombia; Universidad Nacional de Colombia, sede Caribe, Santa Marta, Colombia. Calle 25 No. 2-55, Playa Salguero, Rodadero, Santa Marta, Colombia.
| | - Francisco Rodríguez
- Centro Nacional Instituto Español de Oceanografía (IEO-CSIC), Centro Oceanográfico de Vigo. Subida a Radio Faro 50, 36390 Vigo, Spain; European Union Reference Laboratory for Monitoring of Marine Biotoxins, Citexvi Campus Universitario de Vigo, 36310, Vigo, Spain
| | - Alberto Amato
- Laboratoire de Physiologie Cellulaire et Végétale, Université Grenoble-Alpes CEA CNRS INRA IRIG-CEA Grenoble, 17 rue des Martyrs, 38054 Grenoble Cedex 9, France
| | - Begoña Ben-Gigirey
- European Union Reference Laboratory for Monitoring of Marine Biotoxins, Citexvi Campus Universitario de Vigo, 36310, Vigo, Spain
| | | | - Luiz Laureno Mafra
- Centro de Estudos do Mar, Universidade Federal do Paraná, P.O. Box 61, 83255-976, Pontal do Paraná, PR, Brazil
| | - Luciano Felício Fernandes
- Departamento de Botânica, SCB, Centro Politécnico, Universidade Federal do Paraná, P.O. Box 19031, 81531-990, Curitiba, Paraná CEP Brazil
| | | | - Nicolas Chomérat
- Station de Biologie Marine, IFREMER, Littoral, LER BO, Place de la Croix, F-29900, Concarneau, France
| | - Tomohiro Nishimura
- Cawthron Institute, 98 Halifax Street East, 7010 Nelson, New Zealand; Laboratory of Aquatic Environmental Science (LAQUES), Faculty of Agriculture and Marine Science, Kochi University, 200 Otsu, Monobe, Nankoku, 783-8502, Kochi Japan
| | - Chiho Homma
- Laboratory of Aquatic Environmental Science (LAQUES), Faculty of Agriculture and Marine Science, Kochi University, 200 Otsu, Monobe, Nankoku, 783-8502, Kochi Japan
| | - Masao Adachi
- Laboratory of Aquatic Environmental Science (LAQUES), Faculty of Agriculture and Marine Science, Kochi University, 200 Otsu, Monobe, Nankoku, 783-8502, Kochi Japan
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16
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Fernández-Valero AD, Reñé A, Timoneda N, Sampedro N, Garcés E. Dinoflagellate hosts determine the community structure of marine Chytridiomycota: Demonstration of their prominent interactions. Environ Microbiol 2022; 24:5951-5965. [PMID: 36057937 PMCID: PMC10087856 DOI: 10.1111/1462-2920.16182] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Accepted: 08/26/2022] [Indexed: 01/12/2023]
Abstract
The interactions of parasitic fungi with their phytoplankton hosts in the marine environment are mostly unknown. In this study, we evaluated the diversity of Chytridiomycota in phytoplankton communities dominated by dinoflagellates at several coastal locations in the NW Mediterranean Sea and demonstrated the most prominent interactions of these parasites with their hosts. The protist community in seawater differed from that in sediment, with the latter characterized by a greater heterogeneity of putative hosts, such as dinoflagellates and diatoms, as well as a chytrid community more diverse in its composition and with a higher relative abundance. Chytrids accounted for 77 amplicon sequence variants, of which 70 were found exclusively among different blooming host species. The relative abundance of chytrids was highest in samples dominated by the dinoflagellate genera Ostreopsis and Alexandrium, clearly indicating the presence of specific chytrid communities. The establishment of parasitoid-host co-cultures of chytrids and dinoflagellates allowed the morphological identification and molecular characterization of three species of Chytridiomycota, including Dinomyces arenysensis, as one of the most abundant environmental sequences, and the discovery of two other species not yet described.
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Affiliation(s)
- Alan Denis Fernández-Valero
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Catalonia, Spain
| | - Albert Reñé
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Catalonia, Spain
| | - Natàlia Timoneda
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Catalonia, Spain
| | - Nagore Sampedro
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Catalonia, Spain
| | - Esther Garcés
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Catalonia, Spain
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17
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Stuart J, Smith KF, Rhodes L, Murray JS, Viallon J, Henry K, Darius HT, Murray SA, De Azevedo CD, Argyle P, Chinain M. Geographical distribution, molecular and toxin diversity of the dinoflagellate species Gambierdiscus honu in the Pacific region. HARMFUL ALGAE 2022; 118:102308. [PMID: 36195424 DOI: 10.1016/j.hal.2022.102308] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2022] [Revised: 06/29/2022] [Accepted: 08/07/2022] [Indexed: 06/16/2023]
Abstract
An increase in cases of ciguatera poisoning (CP) and expansion of the causative species in the South Pacific region highlight the need for baseline data on toxic microalgal species to help identify new areas of risk and manage known hot spots. Gambierdiscus honu is a toxin producing and potential CP causing dinoflagellate species, first described in 2017. Currently no high-resolution geographical distribution, intraspecific genetic variation or toxin production diversity data is available for G. honu. This research aimed to further characterize G. honu by investigating its distribution using species-specific real-time polymerase chain reaction assays at 25 sites in an area spanning ∼8000 km of the Coral Sea/Pacific Ocean, and assessing intraspecific genetic variation, toxicity and toxin production of isolated strains. Assessment of genetic variation of the partial rRNA operon of isolates demonstrated no significant intraspecific population structure, in addition to a lack of adherence to isolation by distance (IBD) model of evolution. The detected distribution of G. honu in the Pacific region was within the expected tropical to temperate latitudinal ranges of 10° to -30° and extended from Australia to French Polynesia. In the lipophilic fractions, the neuroblastoma cell-based assay (CBA-N2a) showed no ciguatoxin (CTX)-like activity for nine of the 10 isolates, and an atypical pattern for CAWD233 isolate which showed cytotoxic activity in OV- and OV+ conditions. In the same way, liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis confirmed no Pacific-CTXs (CTX-3B, CTX-3C, CTX-4A, CTX-4B) were produced by the ten strains. The CBA-N2a assessment of the hydrophilic fractions showed moderate to high cytotoxicity in both OV- and OV+ condition for all the strains showing a cytotoxic profile similar to that of gambierone. Indeed, this study is the first to show the cytotoxic activity of gambierone on mouse neuroblastoma cells while no cytotoxicity was observed when 44-MG was analysed at the same concentrations using the CBA-N2a. Analysis of the hydrophilic via LC-MS/MS confirmed production of gambierone in all isolates, ranging from 2.1 to 38.1 pg/cell, with 44-methylgambierone (44-MG) also produced by eight of the isolates, ranging from 0.3 to 42.9 pg/cell. No maitotoxin-1 was detected in any of the isolates. Classification of the G. honu strains according to the quantities of gambierone produced aligned with the classification of their cytotoxicity using the CBA-N2a. Finally, no maitotoxin-1 (MTX) was detected in any of the isolates. This study shows G. honu is widely distributed within the Pacific region with no significant intraspecific population structure present. This aligns with the view of microalgal populations as global metapopulations, however more in-depth assessment with other genetic markers could detect further structure. Toxicity diversity across 10 isolates assessed did not display any geographical patterns.
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Affiliation(s)
- Jacqui Stuart
- Cawthron Institute, Private Bag 2, Nelson 7042, New Zealand.
| | - Kirsty F Smith
- Cawthron Institute, Private Bag 2, Nelson 7042, New Zealand; School of Biological Sciences, University of Auckland, Auckland 1142, New Zealand
| | - Lesley Rhodes
- Cawthron Institute, Private Bag 2, Nelson 7042, New Zealand
| | - J Sam Murray
- Cawthron Institute, Private Bag 2, Nelson 7042, New Zealand
| | - Jérôme Viallon
- Institut Louis Malardé - UMR EIO, Laboratoire des Biotoxines Marines, Papeete, Tahiti, French Polynesia
| | - Kevin Henry
- Institut Louis Malardé - UMR EIO, Laboratoire des Biotoxines Marines, Papeete, Tahiti, French Polynesia
| | - H Taiana Darius
- Institut Louis Malardé - UMR EIO, Laboratoire des Biotoxines Marines, Papeete, Tahiti, French Polynesia
| | | | | | - Phoebe Argyle
- University of Technology Sydney, New South Wales, Australia
| | - Mireille Chinain
- Institut Louis Malardé - UMR EIO, Laboratoire des Biotoxines Marines, Papeete, Tahiti, French Polynesia
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18
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Pandeirada MS, Craveiro SC, Daugbjerg N, Moestrup Ø, Calado AJ. Ultrastructure and phylogeny of Parvodinium cunningtonii comb. nov. (syn. Peridiniopsis cunningtonii) and description of P. cunningtonii var. inerme var. nov. (Peridiniopsidaceae, Dinophyceae). Eur J Protistol 2022; 86:125930. [PMID: 36162240 DOI: 10.1016/j.ejop.2022.125930] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2022] [Revised: 09/01/2022] [Accepted: 09/07/2022] [Indexed: 11/25/2022]
Abstract
Two strains of peridinioids were isolated from a flooded stream near Aveiro, central Portugal, and examined by light microscopy, scanning electron microscopy and serial-section transmission electron microscopy. The two strains showed the same tabulation and cell shape as Peridiniopsis cunningtonii. One of the strains had lightly reticulated plates and spines in most hypothecal plates, matching the features of typical P. cunningtonii. The other strain showed smooth plates and consistently lacked spines in the apiculate hypotheca. The strains were similar in fine structure and had a central pyrenoid with a starch sheath and perforated by cytoplasmic channels. Details of the flagellar apparatus matched those known from Parvodinium, as did the remarkably long microtubular strand leading to an extruded peduncle that was visible in serial sections. Phylogenetic analyses based on partial LSU rDNA and the concatenated ribosomal operon placed the strain with the smooth hypotheca in a clade with Parvodinium species. The two strains grouped as closely related sister taxa in the partial LSU rDNA phylogeny. A new combination is proposed, Parvodinium cunningtonii comb. nov. and a new variety, Parvodinium cunningtonii var. inerme var. nov., is described.
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Affiliation(s)
- Mariana S Pandeirada
- Department of Biology, University of Aveiro, P-3810-193 Aveiro, Portugal; GeoBioTec Research Unit, University of Aveiro, P-3810-193 Aveiro, Portugal
| | - Sandra C Craveiro
- Department of Biology, University of Aveiro, P-3810-193 Aveiro, Portugal; GeoBioTec Research Unit, University of Aveiro, P-3810-193 Aveiro, Portugal.
| | - Niels Daugbjerg
- Marine Biological Section, Department of Biology, University of Copenhagen, Universitetsparken 4, DK-2100 Copenhagen Ø, Denmark
| | - Øjvind Moestrup
- Marine Biological Section, Department of Biology, University of Copenhagen, Universitetsparken 4, DK-2100 Copenhagen Ø, Denmark
| | - António J Calado
- Department of Biology, University of Aveiro, P-3810-193 Aveiro, Portugal; GeoBioTec Research Unit, University of Aveiro, P-3810-193 Aveiro, Portugal
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19
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First Characterization of Ostreopsis cf. ovata (Dinophyceae) and Detection of Ovatoxins during a Multispecific and Toxic Ostreopsis Bloom on French Atlantic Coast. Mar Drugs 2022; 20:md20070461. [PMID: 35877754 PMCID: PMC9315632 DOI: 10.3390/md20070461] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2022] [Revised: 07/08/2022] [Accepted: 07/10/2022] [Indexed: 01/17/2023] Open
Abstract
Blooms of the benthic toxic dinoflagellate genus Ostreopsis have been recorded more frequently during the last two decades, particularly in warm temperate areas such as the Mediterranean Sea. The proliferation of Ostreopsis species may cause deleterious effects on ecosystems and can impact human health through skin contact or aerosol inhalation. In the eastern Atlantic Ocean, the toxic O. cf. ovata has not yet been reported to the north of Portugal, and the only species present further north was O. cf. siamensis, for which the toxic risk is considered low. During summer blooms of unidentified Ostreopsis species on the French Basque coast (Atlantic) in 2020 and 2021, people suffered from irritations and respiratory disorders, and the number of analyzed cases reached 674 in 2021. In order to investigate the causes, sampling was carried out during summer 2021 to (i) taxonomically identify Ostreopsis species present using a molecular approach, (ii) isolate strains from the bloom and culture them, and (iii) characterize the presence of known toxins which may be involved. For the first time, this study reports the presence of both O. cf. siamensis and O. cf. ovata, for which the French Basque coast is a new upper distribution limit. Furthermore, the presence of ovatoxins a, b, c, and d in the environmental sample and in a cultivated strain in culture confirmed the toxic nature of the bloom and allowed identifying O. cf. ovata as the producer. The present data identify a new health risk in the area and highlight the extended distribution of some harmful dinoflagellates, presumably in relation to climate change.
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Revision of the World Species of Megaphragma Timberlake (Hymenoptera: Trichogrammatidae). INSECTS 2022; 13:insects13060561. [PMID: 35735898 PMCID: PMC9225605 DOI: 10.3390/insects13060561] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/16/2022] [Revised: 06/03/2022] [Accepted: 06/04/2022] [Indexed: 02/04/2023]
Abstract
Megaphragma species are important models for basic organismal research, and many are potential biological control agents. We present the first extensive revision of species of the genus Megaphragma based on morphological and molecular data. Our revision includes all previously described species, 6 of which are synonymized, and 22 of which are described here as new. We also provide the first key to all species of the genus and reconstruct their phylogeny based on 28S and CO1 molecular markers. The following species are synonymized with M. longiciliatum Subba Rao: M. aligarhensis Yousuf and Shafee syn. nov.; M. amalphitanum Viggiani syn. nov.; M. decochaetum Lin syn. nov.; M. magniclava Yousuf and Shafee syn. nov.; M. shimalianum Hayat syn. nov.M. anomalifuniculi Yuan and Lou syn. nov. is synonymized with M. polychaetum Lin. The following species are described as new: M. antecessor Polaszek and Fusu sp. nov.; M. breviclavum Polaszek and Fusu sp. nov.; M. chienleei Polaszek and Fusu sp. nov.; M. cockerilli Polaszek and Fusu sp. nov.; M. digitatum Polaszek and Fusu sp. nov.; M. fanenitrakely Polaszek and Fusu sp. nov.; M. funiculatum Fusu, Polaszek, and Viggiani sp. nov.; M. giraulti Viggiani, Fusu, and Polaszek sp. nov.; M. hansoni Polaszek, Fusu, and Viggiani sp. nov.; M. kinuthiae Polaszek, Fusu, and Viggiani sp. nov.; M. liui Polaszek and Fusu sp. nov.; M. momookherjeeae Polaszek and Fusu sp. nov.; M. nowickii Polaszek, Fusu, and Viggiani sp. nov.; M. noyesi Polaszek and Fusu sp. nov.; M. pintoi Viggiani sp. nov.; M. polilovi Polaszek, Fusu, and Viggiani sp. nov.; M. rivelloi Viggiani sp. nov.; M. tamoi Polaszek, Fusu, and Viggiani sp. nov.; M. tridens Fusu, and Polaszek sp. nov.; M. uniclavum Polaszek and Fusu sp. nov.; M. vanlentereni Polaszek and Fusu sp. nov.; M. viggianii Fusu, Polaszek, and Polilov sp. nov.
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21
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Description of an Enigmatic Alveolate, Platyproteum noduliferae n. sp., and Reconstruction of its Flagellar Apparatus. Protist 2022; 173:125878. [DOI: 10.1016/j.protis.2022.125878] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/14/2021] [Revised: 03/02/2022] [Accepted: 03/27/2022] [Indexed: 11/23/2022]
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22
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Biogeography of Long-Jawed Spiders Reveals Multiple Colonization of the Caribbean. DIVERSITY 2021. [DOI: 10.3390/d13120622] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
Abstract
Dispersal ability can affect levels of gene flow thereby shaping species distributions and richness patterns. The intermediate dispersal model of biogeography (IDM) predicts that in island systems, species diversity of those lineages with an intermediate dispersal potential is the highest. Here, we tested this prediction on long-jawed spiders (Tetragnatha) of the Caribbean archipelago using phylogenies from a total of 318 individuals delineated into 54 putative species. Our results support a Tetragnatha monophyly (within our sampling) but reject the monophyly of the Caribbean lineages, where we found low endemism yet high diversity. The reconstructed biogeographic history detects a potential early overwater colonization of the Caribbean, refuting an ancient vicariant origin of the Caribbean Tetragnatha as well as the GAARlandia land-bridge scenario. Instead, the results imply multiple colonization events to and from the Caribbean from the mid-Eocene to late-Miocene. Among arachnids, Tetragnatha uniquely comprises both excellently and poorly dispersing species. A direct test of the IDM would require consideration of three categories of dispersers; however, long-jawed spiders do not fit one of these three a priori definitions, but rather represent a more complex combination of attributes. A taxon such as Tetragnatha, one that readily undergoes evolutionary changes in dispersal propensity, can be referred to as a ‘dynamic disperser’.
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Hoppenrath M, Reñé A, Satta CT, Yamaguchi A, Selina MS. Molecular phylogeny and morphology of Carinadinium gen. nov. (Dinophyceae, Gonyaulacales), including marine sand-dwelling dinoflagellate species formerly classified within Thecadinium. Eur J Protistol 2021; 81:125835. [PMID: 34715455 DOI: 10.1016/j.ejop.2021.125835] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Revised: 06/17/2021] [Accepted: 07/26/2021] [Indexed: 10/20/2022]
Abstract
Thecadinium is a morphologically heterogenous marine benthic genus. Its polyphyly has been discussed. After redefinition of the sensu stricto genus, sensu lato taxa now need reclassification. Heterotrophic, morphologically closely related species were studied in detail. Molecular phylogenetic data for three of the four known species (T. ornatum, T. acanthium, T. ovatum) and new morphological data were obtained, leading to an emended thecal plate pattern, including the presence of an apical pore complex and an additional hypothecal plate. The results confirm the close relationship of the species and justify the description of Carinadinium gen. nov., characterized by the tabulation APC 3/4' 1/0a 6″ 6c 5s 5‴ 2'‴, an epithecal plate of special morphology, an apical flange, a ventral pore, antapical appendages, a descending cingulum and lateral cell flattening. The genus can be separated into two sub-clades, one with a third precingular 'dimple'-plate, four apical and no anterior intercalary plates and the other with a 'multi-pimple'-plate as third precingular or its homolog plate, three apical and one anterior intercalary plate. Carinadinium is phylogenetically related to the planktonic genera Protoceratium, Pentaplacodinium, and Ceratocorys (family Protoceratiaceae), and clearly belongs into the order Gonyaulacales, but with uncertain family affiliation.
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Affiliation(s)
- Mona Hoppenrath
- Senckenberg am Meer, German Centre for Marine Biodiversity Research (DZMB), Südstrand 44, D - 26382 Wilhelmshaven, Germany.
| | - Albert Reñé
- Institut de Ciències del Mar (CSIC), Departament de Biologia Marina i Oceanografia, Pg. Marítim de la Barceloneta, 37-49 08003 Barcelona, Catalonia, Spain
| | - Cecilia T Satta
- Dipartimento di Architettura, Design e Urbanistica, University of Sassari, Via Piandanna 4, 07100 Sassari, Italy
| | - Aika Yamaguchi
- Faculty of Science, Hokkaido University, Sapporo 060-0810, Japan
| | - Marina S Selina
- A.V. Zhirmunsky National Scientific Center of Marine Biology, Far Eastern Branch, Russian Academy of Sciences, Palchevskogo Str17, Vladivostok 690041, Russia
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Nishimura T, Murray JS, Boundy MJ, Balci M, Bowers HA, Smith KF, Harwood DT, Rhodes LL. Update of the Planktonic Diatom Genus Pseudo-nitzschia in Aotearoa New Zealand Coastal Waters: Genetic Diversity and Toxin Production. Toxins (Basel) 2021; 13:637. [PMID: 34564641 PMCID: PMC8473122 DOI: 10.3390/toxins13090637] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 08/31/2021] [Accepted: 09/01/2021] [Indexed: 11/23/2022] Open
Abstract
Domoic acid (DA) is produced by almost half of the species belonging to the diatom genus Pseudo-nitzschia and causes amnesic shellfish poisoning (ASP). It is, therefore, important to investigate the diversity and toxin production of Pseudo-nitzschia species for ASP risk assessments. Between 2018 and 2020, seawater samples were collected from various sites around Aotearoa New Zealand, and 130 clonal isolates of Pseudo-nitzschia were established. Molecular phylogenetic analysis of partial large subunit ribosomal DNA and/or internal transcribed spacer regions revealed that the isolates were divided into 14 species (Pseudo-nitzschia americana, Pseudo-nitzschia arenysensis, Pseudo-nitzschia australis, Pseudo-nitzschia calliantha, Pseudo-nitzschia cuspidata, Pseudo-nitzschia delicatissima, Pseudo-nitzschia fraudulenta, Pseudo-nitzschia galaxiae, Pseudo-nitzschia hasleana, Pseudo-nitzschia multiseries, Pseudo-nitzschia multistriata, Pseudo-nitzschia plurisecta, Pseudo-nitzschia pungens, and Pseudo-nitzschia cf. subpacifica). The P. delicatissima and P. hasleana strains were further divided into two clades/subclades (I and II). Liquid chromatography-tandem mass spectrometry was used to assess the production of DA and DA isomers by 73 representative strains. The analyses revealed that two (P. australis and P. multiseries) of the 14 species produced DA as a primary analogue, along with several DA isomers. This study is the first geographical distribution record of P. arenysensis, P.cuspidata, P. galaxiae, and P. hasleana in New Zealand coastal waters.
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Affiliation(s)
- Tomohiro Nishimura
- Cawthron Institute, Nelson 7010, New Zealand; (J.S.M.); (M.J.B.); (K.F.S.); (D.T.H.)
| | - J. Sam Murray
- Cawthron Institute, Nelson 7010, New Zealand; (J.S.M.); (M.J.B.); (K.F.S.); (D.T.H.)
| | - Michael J. Boundy
- Cawthron Institute, Nelson 7010, New Zealand; (J.S.M.); (M.J.B.); (K.F.S.); (D.T.H.)
| | - Muharrem Balci
- Biology Department, Faculty of Science, Istanbul University, Istanbul 34134, Turkey;
| | - Holly A. Bowers
- Moss Landing Marine Laboratories, Moss Landing, CA 95039, USA;
| | - Kirsty F. Smith
- Cawthron Institute, Nelson 7010, New Zealand; (J.S.M.); (M.J.B.); (K.F.S.); (D.T.H.)
- School of Biological Sciences, University of Auckland, Auckland 1142, New Zealand
| | - D. Tim Harwood
- Cawthron Institute, Nelson 7010, New Zealand; (J.S.M.); (M.J.B.); (K.F.S.); (D.T.H.)
| | - Lesley L. Rhodes
- Cawthron Institute, Nelson 7010, New Zealand; (J.S.M.); (M.J.B.); (K.F.S.); (D.T.H.)
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Loria SF, Prendini L. Burrowing into the forest: Phylogeny of the Asian forest scorpions (Scorpionidae: Heterometrinae) and the evolution of ecomorphotypes. Cladistics 2021; 37:109-161. [PMID: 34478184 DOI: 10.1111/cla.12434] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2019] [Revised: 07/22/2020] [Accepted: 07/27/2020] [Indexed: 01/03/2023] Open
Abstract
Asian forest scorpions (Scorpionidae Latreille, 1802: Heterometrinae Simon, 1879) are distributed across South and Southeast Asia. All are fossorial, constructing burrows under stones or in open ground, in habitats differing in precipitation and vegetation cover, from rainforests and tropical deciduous forests to savanna and scrubland. The systematics of these scorpions has long been confused due to bad taxonomy and the absence of a phylogenetic framework. Although the monophyly of the group was previously confirmed as part of broader phylogenetic analyses based on exemplar species, the only quantitative analysis of species-level variation to date was based on overall similarity. This contribution presents the first species-level phylogenetic analysis of Asian Scorpionidae, based on 186 morphological characters and 4188 aligned base-pairs of DNA sequence data from two nuclear and three mitochondrial loci for 132 terminals including all 41 ingroup species and four outgroup species. Simultaneous analyses of the morphological and molecular datasets with parsimony, Maximum Likelihood and Bayesian Inference provided the framework for a revised classification presented elsewhere. In order to understand how adaptation following dispersal into new habitats has driven the morphological diversification of Asian forest scorpions, species were scored for 10 characters concerning morphology and burrow architecture, which contributed to an ensemble index of adaptation to habitat aridity. Species were classified into three ecomorphotypes based on the index, and ancestral state reconstruction of ecomorphotypes performed on the phylogeny. A pattern was recovered in which lineages and species occurring in different habitats on a continuum from wet (evergreen forest) to dry (savanna, scrubland) exhibited characters presumed to be adaptive and hence responsible for driving scorpion diversification.
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Affiliation(s)
- Stephanie F Loria
- Richard Gilder Graduate School, American Museum of Natural History, Central Park West at 79th Street, New York, NY, 10024-5192, USA.,Arachnology Lab and Scorpion Systematics Research Group, Division of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY, 10024-5192, USA
| | - Lorenzo Prendini
- Arachnology Lab and Scorpion Systematics Research Group, Division of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY, 10024-5192, USA
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Reñé A, Alacid E, Gallisai R, Chambouvet A, Fernández-Valero AD, Garcés E. New Perkinsea Parasitoids of Dinoflagellates Distantly Related to Parviluciferaceae Members. Front Microbiol 2021; 12:701196. [PMID: 34421856 PMCID: PMC8375308 DOI: 10.3389/fmicb.2021.701196] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/27/2021] [Accepted: 07/12/2021] [Indexed: 11/16/2022] Open
Abstract
Perkinsea is a phylogenetic group of protists that includes parasites of distantly related hosts. However, its diversity is still mainly composed of environmental sequences, mostly obtained from freshwater environments. Efforts to isolate and culture parasitoids of dinoflagellates have led to the description of several phylogenetically closely related species constituting the Parviluciferaceae family. In this study, two new parasitoid species infecting dinoflagellates during recurrent coastal blooms are reported. Using the ribosomal RNA (rRNA) gene phylogenies, we show that both cluster within Perkinsea, one of them at the base of Parviluciferaceae and the other in a distinct branch unrelated to other described species. The establishment of host-parasite lab cultures of the latter allowed its morphological characterization, resulting in the formal description of Maranthos nigrum gen. nov., sp. nov. The life-cycle development of the two parasitoids is generally the same as that of other members of the Parviluciferaceae family but they differ in the features of the trophont and sporont stages, including the arrangement of zoospores during the mature sporangium stage and the lack of specialized structures that release the zoospores into the environment. Laboratory cross-infection experiments showed that the parasitoid host range is restricted to dinoflagellates, although it extends across several different genera. The maximum prevalence reached in the tested host populations was lower than in other Parviluciferaceae members. The findings from this study suggest that Perkinsea representatives infecting dinoflagellates are more widespread than previously thought.
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Affiliation(s)
- Albert Reñé
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Spain
| | - Elisabet Alacid
- Living Systems Institute, School of Biosciences, College of Life and Environmental Sciences, University of Exeter, Exeter, United Kingdom.,Department of Zoology, University of Oxford, Oxford, United Kingdom
| | - Rachele Gallisai
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Spain
| | | | - Alan D Fernández-Valero
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Spain
| | - Esther Garcés
- Departament de Biologia Marina i Oceanografia, Institut de Ciències del Mar (CSIC), Barcelona, Spain
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Séchet V, Sibat M, Billien G, Carpentier L, Rovillon GA, Raimbault V, Malo F, Gaillard S, Perrière-Rumebe M, Hess P, Chomérat N. Characterization of toxin-producing strains of Dinophysis spp. (Dinophyceae) isolated from French coastal waters, with a particular focus on the D. acuminata-complex. HARMFUL ALGAE 2021; 107:101974. [PMID: 34456013 DOI: 10.1016/j.hal.2021.101974] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2020] [Revised: 12/22/2020] [Accepted: 01/05/2021] [Indexed: 06/13/2023]
Abstract
Dinoflagellates of the genus Dinophysis are the most prominent producers of Diarrhetic Shellfish Poisoning (DSP) toxins which have an impact on public health and on marine aquaculture worldwide. In particular, Dinophysis acuminata has been reported as the major DSP agent in Western Europe. Still, its contribution to DSP events in the regions of the English Channel and the Atlantic coast of France, and the role of the others species of the Dinophysis community in these areas are not as clear. In addition, species identification within the D. acuminata complex has proven difficult due to their highly similar morphological features. In the present study, 30 clonal strains of the dominant Dinophysis species have been isolated from French coasts including the English Channel (3 sites), the Atlantic Ocean (11 sites) and the Mediterranean Sea (6 sites). Morphologically, strains were identified as three species: D. acuta, D. caudata, D. tripos, as well as the D. acuminata-complex. Sequences of the ITS and LSU rDNA regions confirmed these identifications and revealed no genetic difference within the D. acuminata-complex. Using the mitochondrial gene cox1, two groups of strains differing by only one substitution were found in the D. acuminata-complex, but SEM analysis of various strains showed a large range of morphological variations. Based on geographical origin and morphology, strains of the subclade A were ascribed to 'D. acuminata' while those of the subclade B were ascribed to 'D. sacculus'. Nevertheless, the distinction into two separate species remains questionable and was not supported by our genetic data. The considerable variations observed in cultured strains suggest that physiological factors might influence cell contour and bias identification. Analyses of Dinophysis cultures from French coastal waters using liquid chromatography coupled to tandem mass spectrometry (LC-MS/MS) revealed species-conserved toxin profiles for D. acuta (dinophysistoxin 2 (DTX2), okadaic acid (OA), pectenotoxin 2 (PTX2)), D. caudata (PTX2) and D. tripos (PTX2), irrespective of geographical origin (Atlantic Ocean or Mediterranean Sea). Within the D. acuminata-complex, two different toxin profiles were observed: the strains of 'D. acuminata' (subclade A) from the English Channel and the Atlantic Ocean contained only OA while strains of 'D. sacculus' (subclade B) from Mediterranean Sea/Atlantic Ocean contained PTX2 as the dominant toxin, with OA and C9-esters also being present, albeit in lower proportions. The same difference in toxin profiles between 'D. sacculus' and 'D. acuminata' was reported in several studies from Galicia (NW- Spain). This difference in toxin profiles has consequences in terms of public health, and consequently for monitoring programs. While toxin profile could appear as a reliable feature separating 'D. acuminata' from 'D. sacculus' on both French and Spanish coasts, this does not seem consistent with observations on a broader geographical scale for the D. acuminata complex, possibly due to the frequent lack of genetic characterization.
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Affiliation(s)
- Véronique Séchet
- Ifremer, DYNECO, Laboratoire Phycotoxines, F-44000 Nantes, France.
| | - Manoella Sibat
- Ifremer, DYNECO, Laboratoire Phycotoxines, F-44000 Nantes, France
| | - Gwenael Billien
- Ifremer, LITTORAL, Laboratoire Environnement Ressources de Bretagne Occidentale, Station de Biologie Marine de Concarneau, 29900 Concarneau, France
| | | | | | | | - Florent Malo
- Ifremer, DYNECO, Laboratoire Phycotoxines, F-44000 Nantes, France
| | - Sylvain Gaillard
- Ifremer, DYNECO, Laboratoire Phycotoxines, F-44000 Nantes, France
| | | | - Philipp Hess
- Ifremer, DYNECO, Laboratoire Phycotoxines, F-44000 Nantes, France
| | - Nicolas Chomérat
- Ifremer, LITTORAL, Laboratoire Environnement Ressources de Bretagne Occidentale, Station de Biologie Marine de Concarneau, 29900 Concarneau, France
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Choi H, Kim S. Heterocapsa busanensis sp. nov. (Peridiniales, Dinophyceae): A new marine thecate dinoflagellate from Korean coastal waters. Eur J Protistol 2021; 79:125797. [PMID: 33979712 DOI: 10.1016/j.ejop.2021.125797] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2020] [Revised: 03/30/2021] [Accepted: 04/12/2021] [Indexed: 11/19/2022]
Abstract
During daily monitoring in Yongho Bay off Busan, Korea in 2019, an isolate of the dinoflagellate genus Heterocapsa was established in clonal culture. Light and electron microscopic examination revealed that the isolate was ellipsoid in shape, exhibiting a thecal plate arrangement (Po, cp, X, 5', 3a, 7″, 6c, 5s, 5‴, 2'''') consistent with most other Heterocapsa species. A large, elongated nucleus was positioned on the left side of the cell, a single reticulate chloroplast was located peripherally, and a single, starch-sheathed, spherical pyrenoid was present in the episome or near the cingulum. Morphologically, the isolate most closely resembles H. circularisquama and H. illdefina. Transmission electron microscopic examination of whole mounts revealed that the isolate had two body scale types, one of which was a complex, three-dimensional, fine structure distinct from other Heterocapsa species, whereas the other simpler type was structurally similar to the scales of H. horiguchii. Molecular phylogeny based on rRNA sequences revealed that the isolate was distantly related to morphologically similar species, but formed a sister lineage to H. horiguchii, a species characterized by a similar body scale morphology. Based on morphological, ultrastructural, and molecular data, we proposed it as a new species, Heterocapsa busanensis sp. nov.
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Affiliation(s)
- Hojoon Choi
- Division of Earth Environmental System Science, Pukyong National University, Busan 48513, Republic of Korea
| | - Sunju Kim
- Division of Earth Environmental System Science, Pukyong National University, Busan 48513, Republic of Korea; Department of Oceanography, Pukyong National University, Busan 48513, Republic of Korea.
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Roux P, Siano R, Collin K, Bilien G, Sinquin C, Marchand L, Zykwinska A, Delbarre-Ladrat C, Schapira M. Bacteria enhance the production of extracellular polymeric substances by the green dinoflagellate Lepidodinium chlorophorum. Sci Rep 2021; 11:4795. [PMID: 33637819 PMCID: PMC7910647 DOI: 10.1038/s41598-021-84253-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2020] [Accepted: 02/03/2021] [Indexed: 11/22/2022] Open
Abstract
High biomasses of the marine dinoflagellate Lepidodinium chlorophorum cause green seawater discolorations along Southern Brittany (NE Atlantic, France). The viscosity associated to these phenomena has been related to problems in oyster cultivation. The harmful effect of L. chlorophorum might originate from the secretion of Extracellular Polymeric Substances (EPS). To understand whether the EPS are produced by L. chlorophorum or its associated bacteria, or if they are a product of their interaction, batch cultures were performed under non-axenic and pseudo-axenic conditions for three strains. Maximum dinoflagellate cell abundances were observed in pseudo-axenic cultures. The non-sinking fraction of polymers (Soluble Extracellular Polymers, SEP), mainly composed of proteins and the exopolysaccharide sulphated galactan, slightly increased in pseudo-axenic cultures. The amount of Transparent Exopolymer Particles (TEP) per cell increased under non-axenic conditions. Despite the high concentrations of Particulate Organic Carbon (POC) measured, viscosity did not vary. These results suggest that the L. chlorophorum-bacteria interaction could have a detrimental consequence on the dinoflagellate, translating in a negative effect on L. chlorophorum growth, as well as EPS overproduction by the dinoflagellate, at concentrations that should not affect seawater viscosity.
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Song JY, Kim KY, Choi SW. Occurrence and Molecular Identification of Microcotyle sebastis Isolated from Fish Farms of the Korean Rockfish, Sebastes schlegelii. THE KOREAN JOURNAL OF PARASITOLOGY 2021; 59:89-95. [PMID: 33684992 PMCID: PMC7939961 DOI: 10.3347/kjp.2021.59.1.89] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/12/2020] [Accepted: 01/15/2021] [Indexed: 11/23/2022]
Abstract
Microcotyle sebastis is a gill monogenean ectoparasite that causes serious problems in the mariculture of the Korean rockfish, Sebastes schlegelii. In this study, we isolated the parasite from fish farms along the coasts of Tongyeong, South Korea in 2016, and characterized its infection, morphology and molecular phylogeny. The prevalence of M. sebastis infection during the study period ranged from 46.7% to 96.7%, and the mean intensity was 2.3 to 31.4 ind./fish, indicating that the fish was constantly exposed to parasitic infections throughout the year. Morphological observations under light and scanning electron microscopes of the M. sebastis isolates in this study showed the typical characteristics of the anterior prohaptor and posterior opisthaptor of monogenean parasites. In phylogenetic trees reconstructed using the nuclear 28S ribosomal RNA gene and the mitochondrial cytochrome c oxidase I gene (cox1), they consistently clustered together with their congeneric species, and showed the closest phylogenetic relationships to M. caudata and M. kasago in the cox1 tree.
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Affiliation(s)
- Jun-Young Song
- Pathology Research Division, National Institute of Fisheries Science, Busan 46083, Korea
| | - Keun-Yong Kim
- Department of Genetic Analysis, AquaGenTech Co., Ltd, Busan 48300, Korea
| | - Seo-Woo Choi
- Southeast Sea Fisheries Research Institute, National Institute of Fisheries Science, Tongyeong, 53085, Korea
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Li Y, Guo XH, Lundholm N. Molecular Phylogeny and Taxonomy of the Genus Minidiscus (Bacillariophyceae), with Description of Mediolabrus gen. nov. JOURNAL OF PHYCOLOGY 2020; 56:1443-1456. [PMID: 32510583 DOI: 10.1111/jpy.13038] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2020] [Accepted: 05/06/2020] [Indexed: 06/11/2023]
Abstract
The genus Minidiscus comprises a group of ecologically-important and globally-distributed planktonic diatoms that are characterized by their small cell size, high mantle and processes more or less concentrated in the valve center. Monoclonal strains were established from collections along the Chinese coast. In the phylogenetic analyses inferred from a LSU and SSU dataset, six Minidiscus species clustered into two well-supported clades. The first clade was located within a larger clade formed mainly by Thalassiosira taxa, and the second clade appeared as sister to a clade comprising the genus Skeletonema. Hence, presently known Minidiscus do not form a monophyletic clade, but rather make up a phenotypic grouping. Based on the morphology of the type species, M. trioculatus, as well as morphological characters of all taxa in the clade with M. trioculatus, Minidiscus is characterized by having fultoportula(e) in the valve center or sub-centered close to a single rimoportula, and the cells are usually cylindrical. Mediolabrus gen. nov. is proposed to accommodate species in the second clade. The main difference between Minidiscus and Mediolabrus is the type of process found in the valve (sub-)center, with fultoportula(e) close to a rimoportula in the former, and only a single rimoportula in the latter. According to the above criteria, previously described Minidiscus taxa were re-examined, and either retained in Minidiscus or transferred to Mediolabrus.
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Affiliation(s)
- Yang Li
- Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, Guangdong Provincial key Laboratory of Healthy and Safe Aquaculture, College of Life Science, South China Normal University, West 55 of Zhongshan Avenue, Guangzhou, 510631, China
| | - Xiao-Hui Guo
- Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, Guangdong Provincial key Laboratory of Healthy and Safe Aquaculture, College of Life Science, South China Normal University, West 55 of Zhongshan Avenue, Guangzhou, 510631, China
| | - Nina Lundholm
- Natural History Museum of Denmark, University of Copenhagen, Øster Farimagsgade 5, 1307, Copenhagen K, Denmark
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Borsato GT, Salgueiro F, da Silva CGT, Menezes-Salgueiro AD, Nascimento SM. Ostreopsis lenticularis Y. Fukuyo (Dinophyceae, Gonyaulacales) from the South Atlantic Ocean: morphological and molecular characterization. MARINE POLLUTION BULLETIN 2020; 158:111441. [PMID: 32736204 DOI: 10.1016/j.marpolbul.2020.111441] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2020] [Revised: 07/03/2020] [Accepted: 07/04/2020] [Indexed: 06/11/2023]
Abstract
Ostreopsis is a benthic dinoflagellate genus comprising eleven species including seven that are toxigenic. Ostreopsis lenticularis was first described from French Polynesia and is widely distributed in many insular locations from the Pacific Ocean. The current study presents morphological and molecular evidence of the presence of O. lenticularis at the Fernando de Noronha Archipelago, South Atlantic. Light microscopy and scanning electron microscopy of field cells showed morphological features in agreement with the description of O. lenticularis. Cells were broadly oval, 66.0-117.5 μm in dorso-ventral diameter, 50.0-92.5 μm in width, with thecal plates presenting two kinds of pores. Phylogenetic analyses based on LSU (D1-D3) and ITS sequences from field cells from Fernando de Noronha clustered with O. lenticularis sequences from elsewhere. The species was present in low to high abundances. The current study expands the distribution of O. lenticularis to Fernando de Noronha Archipelago in the South Atlantic Ocean.
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Affiliation(s)
- Geovanna Theobald Borsato
- Laboratório de Microalgas Marinhas, Universidade Federal do Estado do Rio de Janeiro (UNIRIO), Av. Pasteur, 458, 314-B, Rio de Janeiro, RJ 22290-240, Brazil
| | - Fabiano Salgueiro
- Laboratório de Biodiversidade e Evolução Molecular, Universidade Federal do Estado do Rio de Janeiro (UNIRIO), Av. Pasteur, 458, 512, Rio de Janeiro, RJ 22290-240, Brazil.
| | - Cristhian Gomes Tavares da Silva
- Laboratório de Biodiversidade e Evolução Molecular, Universidade Federal do Estado do Rio de Janeiro (UNIRIO), Av. Pasteur, 458, 512, Rio de Janeiro, RJ 22290-240, Brazil; Laboratório de Biotecnologia Vegetal, Instituto Federal de Educação, Ciência e Tecnologia do Rio de Janeiro (IFRJ), Rua Senador Furtado, 121, 112. Maracanã, Rio de Janeiro, RJ 20270-021, Brazil
| | - Adriana D Menezes-Salgueiro
- Laboratório de Biotecnologia Vegetal, Instituto Federal de Educação, Ciência e Tecnologia do Rio de Janeiro (IFRJ), Rua Senador Furtado, 121, 112. Maracanã, Rio de Janeiro, RJ 20270-021, Brazil.
| | - Silvia M Nascimento
- Laboratório de Microalgas Marinhas, Universidade Federal do Estado do Rio de Janeiro (UNIRIO), Av. Pasteur, 458, 314-B, Rio de Janeiro, RJ 22290-240, Brazil.
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Phylogenetic position, complete larval development and larval sexual dimorphism in a rhizocephalan barnacle, Lernaeodiscus rybakovi sp. nov. (Cirripedia: Rhizocephala: Peltogastridae), parasitizing the crab Pachycheles stevensii Stimpson, 1858 (Decapoda: Anomura: Porcellanidae). ZOOL ANZ 2020. [DOI: 10.1016/j.jcz.2020.06.005] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Barua A, Ajani PA, Ruvindy R, Farrell H, Zammit A, Brett S, Hill D, Sarowar C, Hoppenrath M, Murray SA. First Detection of Paralytic Shellfish Toxins from Alexandrium pacificum above the Regulatory Limit in Blue Mussels ( Mytilus galloprovincialis) in New South Wales, Australia. Microorganisms 2020; 8:E905. [PMID: 32560067 PMCID: PMC7356031 DOI: 10.3390/microorganisms8060905] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2020] [Revised: 06/03/2020] [Accepted: 06/04/2020] [Indexed: 01/11/2023] Open
Abstract
In 2016, 2017 and 2018, elevated levels of the species Alexandrium pacificum were detected within a blue mussel (Mytilus galloprovincialis) aquaculture area at Twofold Bay on the south coast of New South Wales, Australia. In 2016, the bloom persisted for at least eight weeks and maximum cell concentrations of 89,000 cells L-1 of A. pacificum were reported. The identity of A. pacificum was confirmed using molecular genetic tools (qPCR and amplicon sequencing) and complemented by light and scanning electron microscopy of cultured strains. Maximum reported concentrations of paralytic shellfish toxins (PSTs) in mussel tissue was 7.2 mg/kg PST STX equivalent. Elevated cell concentrations of A. pacificum were reported along the adjacent coastal shelf areas, and positive PST results were reported from nearby oyster producing estuaries during 2016. This is the first record of PSTs above the regulatory limit (0.8 mg/kg) in commercial aquaculture in New South Wales since the establishment of routine biotoxin monitoring in 2005. The intensity and duration of the 2016 A. pacificum bloom were unusual given the relatively low abundances of A. pacificum in estuarine and coastal waters of the region found in the prior 10 years.
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Affiliation(s)
- Abanti Barua
- Climate Change Cluster (C3), University of Technology Sydney, Sydney 2007, Australia; (P.A.A.); (R.R.); (S.A.M.)
- Department of Microbiology, Noakhali Science and Technology University, Noakhali 3814, Bangladesh
| | - Penelope A. Ajani
- Climate Change Cluster (C3), University of Technology Sydney, Sydney 2007, Australia; (P.A.A.); (R.R.); (S.A.M.)
| | - Rendy Ruvindy
- Climate Change Cluster (C3), University of Technology Sydney, Sydney 2007, Australia; (P.A.A.); (R.R.); (S.A.M.)
| | - Hazel Farrell
- NSW Food Authority, NSW Department of Primary Industries, PO Box 232, Taree 2430, Australia; (H.F.); (A.Z.)
| | - Anthony Zammit
- NSW Food Authority, NSW Department of Primary Industries, PO Box 232, Taree 2430, Australia; (H.F.); (A.Z.)
| | - Steve Brett
- Microalgal Services, 308 Tucker Rd, Ormond 3204, Australia; (S.B.); (D.H.)
| | - David Hill
- Microalgal Services, 308 Tucker Rd, Ormond 3204, Australia; (S.B.); (D.H.)
| | - Chowdhury Sarowar
- Sydney Institute of Marine Science, 19 Chowder Bay Road, Mosman 2088, Australia;
| | - Mona Hoppenrath
- Senckenberg am Meer, Deutsches Zentrum für Marine Biodiversitätsforschung (DZMB), Südstrand 44, 26382 Wilhelmshaven, Germany;
| | - Shauna A. Murray
- Climate Change Cluster (C3), University of Technology Sydney, Sydney 2007, Australia; (P.A.A.); (R.R.); (S.A.M.)
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Xu X, Lundholm N, Li Y. A Study of Chaetoceros debilis Sensu Lato Species (Bacillariophyceae), with Ememdation of C. debilis and Description of C. galeatus Sp. Nov. 1. JOURNAL OF PHYCOLOGY 2020; 56:784-797. [PMID: 32110841 DOI: 10.1111/jpy.12982] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2019] [Accepted: 02/10/2020] [Indexed: 06/10/2023]
Abstract
Chaetoceros debilis is considered one of the most abundant and widespread diatoms in the coastal marine phytoplankton, and is often used in research studies ranging from ecophysiology and molecular biology to oceanography and aquaculture. To clarify the species delineation of C. debilis and explore the diversity among C. debilis sensu lato taxa, monoclonal strains were established from different geographical regions, including the Danish coast, close to the type locality of C. debilis, the Denmark Strait (between Iceland and Greenland) as well as the Taiwan Strait, East China Sea and Daya Bay, South China Sea. Vegetative cells and resting spores were examined using light and electron microscopy. The hypervariable D1-D3 region of the nuclear large subunit ribosomal gene and the small subunit ribosomal gene were sequenced to address phylogenetic relationships. In both SSU and LSU trees, the C. debilis sensu lato strains clustered in four distinct clades. Culture material from the type locality was, along with molecular data, used to delineate and emend the description of C. debilis. Based on molecular data and detailed morphological features, one of the clades originating from Chinese waters was described as C. galeatus sp. nov., characterized by curved and helical chains, elliptical valves, and smooth and helmet-shaped primary valves of the resting spores. The remaining two clades, which also represent two novel taxa, C. cf. debilis-1 and C. cf. debilis-2, were not formally described as new species due to the insufficient information on their morphology.
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Affiliation(s)
- Xiaojing Xu
- Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, Guangdong Provincial Key Laboratory of Healthy and Safe Aquaculture, College of Life Science, South China Normal University, West 55 of Zhongshan Avenue, Guangzhou, 510631, P.R. China
| | - Nina Lundholm
- Natural History Museum of Denmark, University of Copenhagen, Øster Farimagsgade 5, 1307, Copenhagen K, Denmark
| | - Yang Li
- Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, Guangdong Provincial Key Laboratory of Healthy and Safe Aquaculture, College of Life Science, South China Normal University, West 55 of Zhongshan Avenue, Guangzhou, 510631, P.R. China
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Diversity and Toxicity of the Genus Coolia Meunier in Brazil, and Detection of 44-Methyl Gambierone in Coolia tropicalis. Toxins (Basel) 2020; 12:toxins12050327. [PMID: 32429280 PMCID: PMC7290302 DOI: 10.3390/toxins12050327] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2020] [Revised: 05/09/2020] [Accepted: 05/13/2020] [Indexed: 02/02/2023] Open
Abstract
Coolia is a genus of marine benthic dinoflagellates which is widely distributed in tropical and temperate zones. Toxicity has been reported in selected Coolia species, although the identity of causative compounds is still controversial. In this study, we investigated the taxonomical and toxicological aspects of Coolia species from Brazil. Since light- and electron microscopy-based morphology was not enough to distinguish small-celled species, ITS and LSU D1-D3 phylogenetic analyses were used for species definition. Cultures of Coolia palmyrensis and Coolia santacroce were established from samples collected along the northeastern Brazilian coast, the first record of both species in South Atlantic waters. Cultures of Coolia malayensis and Coolia tropicalis were also established and exhibited acute in vivo toxicity to adults of Artemia salina, while C. palmyrensis and C. santacroce were non-toxic. The presence of 30 yessotoxin analogues, 7 metabolites of Coolia and 44 Gambierdiscus metabolites was screened in 14 strains of Coolia. 44-methyl gambierone (formerly referred to as MTX3) and a new isomer of this compound were detected only in C. tropicalis, using both low- and high-resolution LC-MS/MS. To our knowledge, this is the first report of gambierone analogues in dinoflagellates other than Gambierdiscus; the role of C. tropicalis in ciguatera poisoning thus deserves to be considered in further investigations.
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Polaszek A, Noyes JS, Russell S, Ramadan MM. Metaphycus macadamiae (Hymenoptera: Encyrtidae) - a biological control agent of macadamia felted coccid Acanthococcus ironsidei (Hemiptera: Eriococcidae) in Hawaii. PLoS One 2020; 15:e0230944. [PMID: 32267857 PMCID: PMC7141769 DOI: 10.1371/journal.pone.0230944] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Accepted: 03/11/2020] [Indexed: 11/19/2022] Open
Abstract
A new species of encyrtid wasp, Metaphycus macadamiae Polaszek
& Noyes sp. n., (Hymenoptera: Encyrtidae: Encyrtinae) is
described as a solitary endoparasitoid of the invasive macadamia felted coccid,
Acanthococcus ironsidei (Hemiptera: Eriococcidae) in
Hawaii. This parasitoid is native to Australia, and the species description is
based on material collected from a Macadamia integrifolia
Maiden & Betche (Proteaceae) plantation in New South Wales, Australia, the
native region of the host tree and insect. It is described here because it is a
potential biological control agent against this pest where it has recently
invaded Hawaii and South Africa.
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Affiliation(s)
- Andrew Polaszek
- Dept of Life Sciences, Natural History Museum, London, England, United
Kingdom
- * E-mail:
| | - John S. Noyes
- Dept of Life Sciences, Natural History Museum, London, England, United
Kingdom
| | - Stephen Russell
- Core Research Laboratories, Natural History Museum, London, England,
United Kingdom
| | - Mohsen M. Ramadan
- Division of Plant Industry, Plant Pest Control Branch, Hawaii Department
of Agriculture, Honolulu, Hawaii
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38
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Verma A, Kazandjian A, Sarowar C, Harwood DT, Murray JS, Pargmann I, Hoppenrath M, Murray SA. Morphology and Phylogenetics of Benthic Prorocentrum Species (Dinophyceae) from Tropical Northwestern Australia. Toxins (Basel) 2019; 11:toxins11100571. [PMID: 31574958 PMCID: PMC6833055 DOI: 10.3390/toxins11100571] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2019] [Revised: 09/17/2019] [Accepted: 09/27/2019] [Indexed: 01/29/2023] Open
Abstract
Approximately 70 species of Prorocentrum are known, of which around 30 species are associated with benthic habitats. Some produce okadaic acid (OA), dinophysistoxin (DTX) and their derivatives, which are involved in diarrhetic shellfish poisoning. In this study, we isolated and characterized Prorocentrum concavum and P. malayense from Broome in north Western Australia using light and scanning electron microscopy as well as molecular sequences of large subunit regions of ribosomal DNA, marking the first record of these species from Australian waters. The morphology of the motile cells of P. malayense was similar to P. concavum in the light microscopy, but differed by the smooth thecal surface, the pore pattern and the production of mucous stalk-like structures and a hyaline sheath around the non-motile cells. P. malayense could also be differentiated from other closely related species, P. leve and P. foraminosum, despite the similarity in thecal surface and pore pattern, by its platelet formula and morphologies. We tested the production of OA and DTXs from both species, but found that they did not produce detectable levels of these toxins in the given culturing conditions. This study aids in establishing more effective monitoring of potential harmful algal taxa in Australian waters for aquaculture and recreational purposes.
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Affiliation(s)
- Arjun Verma
- Climate Change Cluster, University of Technology Sydney, Ultimo, NSW 2007, Australia.
| | - Aniuska Kazandjian
- Climate Change Cluster, University of Technology Sydney, Ultimo, NSW 2007, Australia.
- Laboratorio de Sistemática Molecular, Centro de Biodiversidad Marina, Universidad Simón Bolívar, Caracas 89000, Venezuela.
| | | | - D Tim Harwood
- Seafood Safety Research Programme, Cawthron Institute, Nelson 7010, New Zealand.
| | - J Sam Murray
- Seafood Safety Research Programme, Cawthron Institute, Nelson 7010, New Zealand.
| | - Insa Pargmann
- Institut für Biologie und Umweltwissenschaften, Carl von Ossietzky Universität Oldenburg, D-26129 Oldenburg; Germany.
| | - Mona Hoppenrath
- Institut für Biologie und Umweltwissenschaften, Carl von Ossietzky Universität Oldenburg, D-26129 Oldenburg; Germany.
- Senckenberg am Meer, German Centre for Marine Biodiversity Research (DZMB), D-26382 Wilhelmshaven, Germany.
| | - Shauna A Murray
- Climate Change Cluster, University of Technology Sydney, Ultimo, NSW 2007, Australia.
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Massariol FC, Takiya DM, Salles FF. Global classification and evolution of brushlegged mayflies (Insecta: Ephemeroptera: Oligoneuriidae): phylogenetic analyses of morphological and molecular data and dated historical biogeography. Zool J Linn Soc 2019. [DOI: 10.1093/zoolinnean/zlz031] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
AbstractOligoneuriidae is a Pantropical family of Ephemeroptera, with 68 species described in 12 genera. Three subfamilies are recognized: Chromarcyinae, with a single species from East Asia; Colocrurinae, with two fossil species from Brazil; and Oligoneuriinae, with the remaining species distributed in the Neotropical, Nearctic, Afrotropical and Palaearctic regions. Phylogenetic and biogeographical analyses were performed for the family based on 2762 characters [73 morphological and 2689 molecular (COI, 16S, 18S and 28S)]. Four major groups were recovered in all analyses (parsimony, maximum likelihood and Bayesian inference), and they were assigned to tribal level, namely Oligoneuriini, Homoeoneuriini trib. nov., Oligoneuriellini trib. nov. and Elassoneuriini trib. nov. In addition, Yawari and Madeconeuria were elevated to genus level. According to Statistical Dispersal-Vicariance (S-DIVA), Dispersal Extinction Cladogenesis (DEC) and divergence time estimation analyses, Oligoneuriidae originated ~150 Mya in the Gondwanan supercontinent, but was probably restricted to the currently delimited Neotropical region. The initial divergence of Oligoneuriidae involved a range expansion to Oriental and Afrotropical areas, sometime between 150 and 118 Mya. At ~118 Mya, the family started its diversification, reaching the Nearctic through dispersal from the Neotropical region and the Palaearctic and Madagascar from the Afrotropical region.
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Affiliation(s)
- Fabiana Criste Massariol
- Laboratório de Sistemática e Ecologia de Insetos, Universidade Federal do Espírito Santo, Departamento de Ciências Agrárias e Biológicas, São Mateus, ES, Brazil
- Programa de Pós-Graduação em Biologia Animal, Universidade Federal do Espírito Santo, Vitória, Brazil
| | - Daniela Maeda Takiya
- Laboratório de Entomologia, Departamento de Zoologia, Universidade Federal do Rio de Janeiro, Caixa Postal, Rio de Janeiro, RJ, Brazil
| | - Frederico Falcão Salles
- Museu de Entomologia, Departamento de Entomologia, Universidade Federal de Viçosa, Viçosa, MG, Brazil
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Larsson ME, Smith KF, Doblin MA. First description of the environmental niche of the epibenthic dinoflagellate species Coolia palmyrensis, C. malayensis, and C. tropicalis (Dinophyceae) from Eastern Australia. JOURNAL OF PHYCOLOGY 2019; 55:565-577. [PMID: 30635909 DOI: 10.1111/jpy.12833] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Accepted: 11/11/2018] [Indexed: 06/09/2023]
Abstract
Environmental variables such as temperature, salinity, and irradiance are significant drivers of microalgal growth and distribution. Therefore, understanding how these variables influence fitness of potentially toxic microalgal species is particularly important. In this study, strains of the potentially harmful epibenthic dinoflagellate species Coolia palmyrensis, C. malayensis, and C. tropicalis were isolated from coastal shallow water habitats on the east coast of Australia and identified using the D1-D3 region of the large subunit (LSU) ribosomal DNA (rDNA). To determine the environmental niche of each taxon, growth was measured across a gradient of temperature (15-30°C), salinity (20-38), and irradiance (10-200 μmol photons · m-2 · s-1 ). Specific growth rates of Coolia tropicalis were highest under warm temperatures (27°C), low salinities (ca. 23), and intermediate irradiance levels (150 μmol photons · m-2 · s-1 ), while C. malayensis showed the highest growth at moderate temperatures (24°C) and irradiance levels (150 μmol photons · m-2 · s-1 ) and growth rates were consistent across the range of salinity levels tested (20-38). Coolia palmyrensis had the highest growth rate of all species tested and favored moderate temperatures (24°C), oceanic salinity (35), and high irradiance (>200 μmol photons · m-2 · s-1 ). This is the first study to characterize the environmental niche of species from the benthic harmful algal bloom genus Coolia and provides important information to help define species distributions and inform risk management.
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Affiliation(s)
- Michaela E Larsson
- Climate Change Cluster, Faculty of Science, University of Technology Sydney, PO Box 123 Broadway, Sydney, New South Wales, 2007, Australia
| | - Kirsty F Smith
- Cawthron Institute, 98 Halifax Street East, Private Bag 2, Nelson, 7010, New Zealand
| | - Martina A Doblin
- Climate Change Cluster, Faculty of Science, University of Technology Sydney, PO Box 123 Broadway, Sydney, New South Wales, 2007, Australia
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The Algicidal Bacterium Kordia algicida Shapes a Natural Plankton Community. Appl Environ Microbiol 2019; 85:AEM.02779-18. [PMID: 30737345 PMCID: PMC6585488 DOI: 10.1128/aem.02779-18] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Accepted: 01/27/2019] [Indexed: 11/23/2022] Open
Abstract
Plankton communities change on a seasonal basis in temperate systems, with distinct succession patterns; this is mainly due to algal species that have their optimal timing relative to environmental conditions. We know that bacterial populations are also instrumental in the decay and termination of phytoplankton blooms. Here, we describe algicidal bacteria as modulators of this important species succession. Upon treatment of a natural plankton consortium with an algicidal bacterium, we observed a strong shift in the phytoplankton community structure, compared to controls, resulting in formation of a succeeding Phaeocystis bloom. Blooms of this alga have a substantial impact on global biogeochemical and ecological cycles, as they are responsible for a substantial proportion of primary production during spring in the North Sea. We propose that one of the key factors influencing such community shifts may be algicidal bacteria. Plankton communities consist of complex microbial consortia that change over time. These fluctuations can be only partially explained by limiting resources. Biotic factors such as herbivores and pathogens also contribute to the control of algal blooms. Here we address the effects of algicidal bacteria on a natural plankton community in an indoor enclosure experiment. The algicidal bacteria, introduced into plankton taken directly from the North Sea during a diatom bloom, caused the rapid decline of the bloom-forming Chaetoceros socialis within only 1 day. The haptophyte Phaeocystis, in contrast, is resistant to the lytic bacteria and could benefit from the removal of the competitor, as indicated by an onset of a bloom in the treated enclosures. This cascading effect caused by the bacterial pathogen accelerated the succession of Phaeocystis, which bloomed with a delay of only several weeks in the in situ waters at Helgoland Roads in the North Sea. The algicidal bacteria can thus modulate the community within the limits of the abiotic and biotic conditions of the local environment. Implications of our findings for plankton ecosystem functioning are discussed. IMPORTANCE Plankton communities change on a seasonal basis in temperate systems, with distinct succession patterns; this is mainly due to algal species that have their optimal timing relative to environmental conditions. We know that bacterial populations are also instrumental in the decay and termination of phytoplankton blooms. Here, we describe algicidal bacteria as modulators of this important species succession. Upon treatment of a natural plankton consortium with an algicidal bacterium, we observed a strong shift in the phytoplankton community structure, compared to controls, resulting in formation of a succeeding Phaeocystis bloom. Blooms of this alga have a substantial impact on global biogeochemical and ecological cycles, as they are responsible for a substantial proportion of primary production during spring in the North Sea. We propose that one of the key factors influencing such community shifts may be algicidal bacteria.
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42
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Esposito LA, Prendini L. Island Ancestors and New World Biogeography: A Case Study from the Scorpions (Buthidae: Centruroidinae). Sci Rep 2019; 9:3500. [PMID: 30837519 PMCID: PMC6401060 DOI: 10.1038/s41598-018-33754-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2018] [Accepted: 09/27/2018] [Indexed: 01/07/2023] Open
Abstract
Scorpions are an excellent system for understanding biogeographical patterns. Most major scorpion lineages predate modern landforms, making them suitable for testing hypotheses of vicariance and dispersal. The Caribbean islands are endowed with a rich and largely endemic scorpion fauna, the origins of which have not been previously investigated with modern biogeographical methods. Three sets of hypotheses have been proposed to explain present patterns of diversity in the Caribbean: (1) connections via land bridges, (2) vicariance events, and (3) overwater dispersal from continents and among islands. The present study investigates the biogeographical diversification of the New World buthid scorpion subfamily Centruroidinae Kraus, 1955, a clade of seven genera and more than 110 species; infers the ancestral distributions of these scorpions; and tests the relative roles of vicariance and dispersal in the formation of their present distributions. A fossil-calibrated molecular phylogeny was estimated with a Bayesian criterion to infer the dates of diversification events from which ancestral distributions were reconstructed, and the relative likelihood of models of vicariance vs. dispersal, calculated. Although both the timing of diversification and the ancestral distributions were congruent with the GAARlandia land-bridge hypothesis, there was no significant difference between distance-dependent models with or without the land-bridge. Heteroctenus Pocock, 1893, the Caribbean-endemic sister taxon of Centruroides Marx, 1890 provides evidence for a Caribbean ancestor, which subsequently colonized Central America and North America, and eventually re-colonized the Greater Antilles. This 'reverse colonization' event of a continent from an island demonstrates the importance of islands as a potential source of biodiversity.
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Affiliation(s)
- Lauren A Esposito
- Scorpion Systematics Research Group, Division of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY, 10024-5192, USA.
- Graduate School and University Center, City University of New York, 365 5th Avenue, New York, NY, 10016, USA.
- Essig Museum of Entomology, 130 Mulford Hall, University of California, Berkeley, CA, 94720-3114, USA.
- Institute for Biodiversity Science and Sustainability, California Academy of Sciences, 55 Music Concourse Drive, San Francisco, CA, 94118, USA.
| | - Lorenzo Prendini
- Scorpion Systematics Research Group, Division of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY, 10024-5192, USA
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Xu XJ, Chen ZY, Lundholm N, Li Y. Diversity in the section Compressa of the genus Chaetoceros (Bacillariophyceae), with description of two new species from Chinese warm waters. JOURNAL OF PHYCOLOGY 2019; 55:104-117. [PMID: 30368809 DOI: 10.1111/jpy.12807] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/09/2018] [Accepted: 08/14/2018] [Indexed: 06/08/2023]
Abstract
Monoclonal strains of Chaetoceros species were collected from Chinese warm waters. Vegetative cells and resting spores were examined using light microscopy as well as scanning and transmission electron microscopy. Combined morphological and DNA sequence data from the hypervariable D1-D3 region of the nuclear ribosomal large subunit showed the presence of two new species within the section Compressa, herein described as Chaetoceros bifurcatus sp. nov. and C. millipedarius sp. nov. Both species possessed features typical of the section Compressa, but C. bifurcatus was characterized by the heavy intercalary setae fusing and extending together for a distance before diverging. The heavy setae were not visually contorted, lacking poroids and spines, in contrast with how the section Compressa has been defined. Chaetoceros millipedarius was characterized by a horizontal stagger of ordinary intercalary setae when the chain was seen in broad girdle view, making the chain look like a millipede. The two new species were supported by molecular phylogenetic analyses with C. bifurcatus sister to C. contortus var. ornatus, while C. millipedarius was sister to C. contortus var. contortus. Based on the morphological features exhibited in C. bifurcatus, the diagnosis of the section Compressa was emended to exclude "contorted" heavy setae and compressed valve faces.
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Affiliation(s)
- Xiao Jing Xu
- Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, Guangdong Provincial Key Laboratory of Healthy and Safe Aquaculture, College of Life Science, South China Normal University, West 55 of Zhongshan Avenue, Guangzhou, 510631, China
| | - Zuo Yi Chen
- The Eighth Geological Brigade, Hebei Geological Prospecting Bureau, Qinhuangdao, 066001, China
| | - Nina Lundholm
- Natural History Museum of Denmark, University of Copenhagen, Sølvgade 83S, Copenhagen, Denmark
| | - Yang Li
- Guangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, Guangdong Provincial Key Laboratory of Healthy and Safe Aquaculture, College of Life Science, South China Normal University, West 55 of Zhongshan Avenue, Guangzhou, 510631, China
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Čandek K, Agnarsson I, Binford GJ, Kuntner M. Biogeography of the Caribbean Cyrtognatha spiders. Sci Rep 2019; 9:397. [PMID: 30674906 PMCID: PMC6344596 DOI: 10.1038/s41598-018-36590-y] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/23/2018] [Accepted: 11/01/2018] [Indexed: 12/18/2022] Open
Abstract
Island systems provide excellent arenas to test evolutionary hypotheses pertaining to gene flow and diversification of dispersal-limited organisms. Here we focus on an orbweaver spider genus Cyrtognatha (Tetragnathidae) from the Caribbean, with the aims to reconstruct its evolutionary history, examine its biogeographic history in the archipelago, and to estimate the timing and route of Caribbean colonization. Specifically, we test if Cyrtognatha biogeographic history is consistent with an ancient vicariant scenario (the GAARlandia landbridge hypothesis) or overwater dispersal. We reconstructed a species level phylogeny based on one mitochondrial (COI) and one nuclear (28S) marker. We then used this topology to constrain a time-calibrated mtDNA phylogeny, for subsequent biogeographical analyses in BioGeoBEARS of over 100 originally sampled Cyrtognatha individuals, using models with and without a founder event parameter. Our results suggest a radiation of Caribbean Cyrtognatha, containing 11 to 14 species that are exclusively single island endemics. Although biogeographic reconstructions cannot refute a vicariant origin of the Caribbean clade, possibly an artifact of sparse outgroup availability, they indicate timing of colonization that is much too recent for GAARlandia to have played a role. Instead, an overwater colonization to the Caribbean in mid-Miocene better explains the data. From Hispaniola, Cyrtognatha subsequently dispersed to, and diversified on, the other islands of the Greater, and Lesser Antilles. Within the constraints of our island system and data, a model that omits the founder event parameter from biogeographic analysis is less suitable than the equivalent model with a founder event.
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Affiliation(s)
- Klemen Čandek
- Evolutionary Zoology Laboratory, Department of Organisms and Ecosystems Research, National Institute of Biology, Ljubljana, Slovenia.
- Evolutionary Zoology Laboratory, Institute of Biology, Research Centre of the Slovenian Academy of the Sciences and Arts, Ljubljana, Slovenia.
- Department of Biology, Biotechnical Faculty, University of Ljubljana, Ljubljana, Slovenia.
| | - Ingi Agnarsson
- Department of Biology, University of Vermont, Burlington, VT, USA
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, Washington D.C., USA
| | - Greta J Binford
- Department of Biology, Lewis and Clark College, Portland, OR, USA
| | - Matjaž Kuntner
- Evolutionary Zoology Laboratory, Department of Organisms and Ecosystems Research, National Institute of Biology, Ljubljana, Slovenia
- Department of Entomology, National Museum of Natural History, Smithsonian Institution, Washington D.C., USA
- College of Life Sciences, Hubei University, Wuhan, Hubei, China
- Evolutionary Zoology Laboratory, Institute of Biology, Research Centre of the Slovenian Academy of the Sciences and Arts, Ljubljana, Slovenia
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Bolaños LM, Rosenblueth M, Manrique de Lara A, Migueles-Lozano A, Gil-Aguillón C, Mateo-Estrada V, González-Serrano F, Santibáñez-López CE, García-Santibáñez T, Martínez-Romero E. Cophylogenetic analysis suggests cospeciation between the Scorpion Mycoplasma Clade symbionts and their hosts. PLoS One 2019; 14:e0209588. [PMID: 30625167 PMCID: PMC6326461 DOI: 10.1371/journal.pone.0209588] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2018] [Accepted: 12/08/2018] [Indexed: 11/19/2022] Open
Abstract
Scorpions are predator arachnids of ancient origin and worldwide distribution. Two scorpion species, Vaejovis smithi and Centruroides limpidus, were found to harbor two different Mollicutes phylotypes: a Scorpion Mycoplasma Clade (SMC) and Scorpion Group 1 (SG1). Here we investigated, using a targeted gene sequencing strategy, whether these Mollicutes were present in 23 scorpion morphospecies belonging to the Vaejovidae, Carboctonidae, Euscorpiidae, Diplocentridae, and Buthidae families. Our results revealed that SMC is found in a species-specific association with Vaejovidae and Buthidae, whereas SG1 is uniquely found in Vaejovidae. SMC and SG1 co-occur only in Vaejovis smithi where 43% of the individuals host both phylotypes. A phylogenetic analysis of Mollicutes 16S rRNA showed that SMC and SG1 constitute well-delineated phylotypes. Additionally, we found that SMC and scorpion phylogenies are significantly congruent, supporting the observation that a cospeciation process may have occurred. This study highlights the phylogenetic diversity of the scorpion associated Mollicutes through different species revealing a possible cospeciation pattern.
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Affiliation(s)
- Luis M. Bolaños
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Mónica Rosenblueth
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Amaranta Manrique de Lara
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Analí Migueles-Lozano
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Citlali Gil-Aguillón
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Valeria Mateo-Estrada
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Francisco González-Serrano
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Carlos E. Santibáñez-López
- Departamento de Medicina Molecular y Bioprocesos, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Tonalli García-Santibáñez
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
| | - Esperanza Martínez-Romero
- Laboratorio de Ecología Genómica, Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México, Cuernavaca, Mor, Mexico
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Edgecombe GD, Huey JA, Humphreys WF, Hillyer M, Burger MA, Volschenk ES, Waldock JM. Blind scolopendrid centipedes of the genus Cormocephalus from subterranean habitats in Western Australia (Myriapoda: Scolopendromorpha: Scolopendridae). INVERTEBR SYST 2019. [DOI: 10.1071/is19015] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Only a single blind species is known in the centipede family Scolopendridae, representing the monotypic genus Tonkinodentus Schileyko, 1992, from Vietnam. All of more than 400 other species have four ocelli on each side of the cephalic plate. A complex of three new blind species of the genus Cormocephalus Newport, 1844, is described from the subterranean fauna of the central Pilbara region of Western Australia. Phylogenies based on sequence data for the barcode region of COI and a concatenated matrix that also includes 12S rRNA, 28S rRNA and ITS2 unite the blind Pilbara species as a monophyletic group, albeit with moderate bootstrap support, informally named the C. sagmus species group. Cormocephalus sagmus, C. pyropygus and C. delta spp. nov. supplement 17 epigean congeners previously described from Australia. The new species are all morphologically similar, but can be distinguished using the shape and spinulation of the ultimate leg prefemur. Two additional genetically distinct lineages were recovered that are not described, owing to the specimens being immature or lacking diagnostic morphological characters. The subterranean radiation in the Pilbara is more closely related to species from forests in the south-west of Western Australia than to congeners from the arid zone.
http://zoobank.org/urn:lsid:zoobank.org:pub:6F67FD31-A373-4DC5-A5FD-374D32DEE02C
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Garvetto A, Nézan E, Badis Y, Bilien G, Arce P, Bresnan E, Gachon CMM, Siano R. Novel Widespread Marine Oomycetes Parasitising Diatoms, Including the Toxic Genus Pseudo-nitzschia: Genetic, Morphological, and Ecological Characterisation. Front Microbiol 2018; 9:2918. [PMID: 30559730 PMCID: PMC6286980 DOI: 10.3389/fmicb.2018.02918] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2018] [Accepted: 11/13/2018] [Indexed: 01/16/2023] Open
Abstract
Parasites are key drivers of phytoplankton bloom dynamics and related aquatic ecosystem processes. Yet, the dearth of morphological and molecular information hinders the assessment of their diversity and ecological role. Using single-cell techniques, we characterise morphologically and molecularly, intracellular parasitoids infecting four potentially toxin-producing Pseudo-nitzschia and one Melosira species on the North Atlantic coast. These sequences define two, morphologically indistinguishable clades within the phylum Oomycota, related to the genera of algal parasites Anisolpidium and Olpidiopsis and the diatom parasitoid species Miracula helgolandica. Our morphological data are insufficient to attribute either clade to the still unsequenced genus Ectrogella; hence it is proposed to name the clades OOM_1 and OOM_2. A screening of global databases of the barcode regions V4 and V9 of the 18S rDNA demonstrate the presence of these parasitoids beyond the North Atlantic coastal region. During a biweekly metabarcoding survey (Concarneau Bay, France), reads associated with one sequenced parasitoid coincided with the decline of Cerataulina pelagica bloom, whilst the other parasitoids co-occurred at low abundance with Pseudo-nitzschia. Our data highlight a complex and unexplored diversity of the oomycete parasitoids of diatoms and calls for the investigation of their phenology, evolution, and potential contribution in controlling their host spatial-temporal dynamics.
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Affiliation(s)
- Andrea Garvetto
- The Scottish Association for Marine Science, Scottish Marine Institute, Oban, United Kingdom
| | - Elisabeth Nézan
- IFREMER, ODE/UL/LER BO, Station de Biologie Marine de Concarneau, Concarneau, France
| | - Yacine Badis
- The Scottish Association for Marine Science, Scottish Marine Institute, Oban, United Kingdom
| | - Gwenael Bilien
- IFREMER, ODE/UL/LER BO, Station de Biologie Marine de Concarneau, Concarneau, France
| | - Paola Arce
- The Scottish Association for Marine Science, Scottish Marine Institute, Oban, United Kingdom
| | - Eileen Bresnan
- Marine Scotland Science, Marine Laboratory, Aberdeen, United Kingdom
| | - Claire M. M. Gachon
- The Scottish Association for Marine Science, Scottish Marine Institute, Oban, United Kingdom
| | - Raffaele Siano
- IFREMER – Centre de Brest, DYNECO PELAGOS, Plouzané, France
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Chen ZY, Lundholm N, Moestrup Ø, Kownacka J, Li Y. Chaetoceros pauciramosus sp. nov. (Bacillariophyceae), a Widely Distributed Brackish Water Species in the C. lorenzianus Complex. Protist 2018; 169:615-631. [DOI: 10.1016/j.protis.2018.06.007] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2018] [Revised: 05/27/2018] [Accepted: 06/28/2018] [Indexed: 10/28/2022]
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Ubinski CV, Carvalho LS, Schneider MC. Mechanisms of karyotype evolution in the Brazilian scorpions of the subfamily Centruroidinae (Buthidae). Genetica 2018; 146:475-486. [PMID: 30206751 DOI: 10.1007/s10709-018-0038-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2018] [Accepted: 09/05/2018] [Indexed: 01/09/2023]
Abstract
The recently-revised subfamily Centruroidinae is part of the New World clade of buthid scorpions. In this study, we analyzed the cytogenetic characteristics of nine of the 10 Brazilian centruroidines, and one undescribed species of the genus Ischnotelson, using a phylogenetic approach to determine the chromosomal rearrangements responsible for the differentiation of karyotypes among the species. The cytogenetic data recorded in the present study supported the new taxonomic arrangement of the Centruroidinae, with all the species of the same genus sharing the same or similar diploid numbers, i.e., 2n = 20 or 22 in Troglorhopalurus lacrau and T. translucidus, 2n = 25 or 26 in Ischnotelson sp., I. guanambiensis and I. peruassu, and 2n = 28 in Jaguajir agamemnon, J. pintoi and J. rochae. The karyotype modelling in the ChromEvol software indicated 2n = 18 as the ancestral diploid number of the Centruroidinae. The differentiation of karyotypes among the centruroidine genera was based on increasing chromosome numbers resulting from progressive fission events. These changes probably occurred prior to the diversification of the genera Ischnotelson, Jaguajir, Physoctonus and Rhopalurus, and appear to have played a more important role in karyotype evolution at the intergeneric level than the interspecific one. However, the observed increase in diploid numbers was not accompanied by changes in the number or location of ribosomal genes or telomeric sequences. The identification of meiotic cells in female specimens also allowed us to discuss the mechanisms of achiasmatic meiosis in scorpions.
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Affiliation(s)
- Crislaine Vanessa Ubinski
- Departamento de Ecologia e Biologia Evolutiva, Universidade Federal de São Paulo, UNIFESP, Av. Prof. Artur Riedel, 275, Diadema, São Paulo, 09972-270, Brazil
| | - Leonardo Sousa Carvalho
- Universidade Federal do Piauí, UFPI, Campus Amílcar Ferreira Sobral, BR 343, Km 3.5, Floriano, Piauí, 64800-000, Brazil
| | - Marielle Cristina Schneider
- Departamento de Ecologia e Biologia Evolutiva, Universidade Federal de São Paulo, UNIFESP, Av. Prof. Artur Riedel, 275, Diadema, São Paulo, 09972-270, Brazil.
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50
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Ajani PA, Verma A, Lassudrie M, Doblin MA, Murray SA. A new diatom species P. hallegraeffii sp. nov. belonging to the toxic genus Pseudo-nitzschia (Bacillariophyceae) from the East Australian Current. PLoS One 2018; 13:e0195622. [PMID: 29649303 PMCID: PMC5896966 DOI: 10.1371/journal.pone.0195622] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2017] [Accepted: 03/25/2018] [Indexed: 11/18/2022] Open
Abstract
A new species belonging to the toxin producing diatom genus Pseudo-nitzschia, P. hallegraeffii sp. nov., is delineated and described from the East Australian Current (EAC). Clonal cultures were established by single cell isolation from phytoplankton net hauls collected as part of a research expedition in the EAC region in 2016 on the RV Investigator. Cultures were assessed for their morphological and genetic characteristics, their sexual compatibility with other Pseudo-nitzschia species, and their ability to produce domoic acid. Light and transmission electron microscopy revealed cells which differed from their closest relatives by their cell width, rows of poroids, girdle band structure and density of band straie. Phylogenetic analyses based on sequencing of nuclear-encoded ribosomal deoxyribonucleic acid (rDNA) regions showed this novel genotype clustered within the P. delicatissima complex, but formed a discrete clade from its closest relatives P. dolorosa, P. simulans, P. micropora and P. delicatissima. Complementary base changes (CBCs) were observed in the secondary structure of the 3’ nuclear ribosomal transcribed spacer sequence region (ITS2) between P. hallegraeffii sp. nov. and its closest related taxa, P. simulans and P. dolorosa. Under laboratory conditions, and in the absence of any zooplankton cues, strains of P. hallegraeffii sp. nov. did not produce domoic acid (DA) and were not sexually compatible with any other Pseudo-nitzschia clones tested. A total of 18 Pseudo-nitzschia species, including three confirmed toxigenic species (P. cuspidata, P. multistriata and P. australis) have now been unequivocally confirmed from eastern Australia.
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Affiliation(s)
- Penelope A. Ajani
- Climate Change Cluster (C3), University of Technology Sydney, Broadway, NSW, Australia
- * E-mail:
| | - Arjun Verma
- Climate Change Cluster (C3), University of Technology Sydney, Broadway, NSW, Australia
| | - Malwenn Lassudrie
- Climate Change Cluster (C3), University of Technology Sydney, Broadway, NSW, Australia
| | - Martina A. Doblin
- Climate Change Cluster (C3), University of Technology Sydney, Broadway, NSW, Australia
| | - Shauna A. Murray
- Climate Change Cluster (C3), University of Technology Sydney, Broadway, NSW, Australia
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