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For: Tung CW, Cheng HJ, Wang CC, Wang SS, Lin P. Leveraging complementary computational models for prioritizing chemicals of developmental and reproductive toxicity concern: an example of food contact materials. Arch Toxicol 2020;94:485-494. [PMID: 31897520 DOI: 10.1007/s00204-019-02641-0] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Accepted: 12/02/2019] [Indexed: 12/23/2022]
Number Cited by Other Article(s)
1
Wang SS, Wang CC, Wang CL, Lin YC, Tung CW. Incorporating Tissue-Specific Gene Expression Data to Improve Chemical-Disease Inference of in Silico Toxicogenomics Methods. J Xenobiot 2024;14:1023-1035. [PMID: 39189172 PMCID: PMC11348041 DOI: 10.3390/jox14030057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Revised: 07/08/2024] [Accepted: 07/30/2024] [Indexed: 08/28/2024]  Open
2
Marić Đ, Baralić K, Vukelić D, Milošević I, Nikolić A, Antonijević B, Đukić-Ćosić D, Bulat Z, Aschner M, Djordjevic AB. Thyroid under siege: Unravelling the toxic impact of real-life metal mixture exposures in Wistar rats. CHEMOSPHERE 2024;360:142441. [PMID: 38797200 DOI: 10.1016/j.chemosphere.2024.142441] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2023] [Revised: 04/26/2024] [Accepted: 05/24/2024] [Indexed: 05/29/2024]
3
Radović B, Baralić K, Ćurčić M, Marić Đ, Živanović J, Antonijević Miljaković E, Buha Djordjevic A, Ćosić DĐ, Bulat Z, Antonijević B. Endocrine disruptors in e-waste dismantling dust: In silico prediction of mixture-induced reproductive toxicity mechanisms. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;917:170437. [PMID: 38290670 DOI: 10.1016/j.scitotenv.2024.170437] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2023] [Revised: 01/23/2024] [Accepted: 01/23/2024] [Indexed: 02/01/2024]
4
Wang X, Li F, Meng X, Xia C, Ji C, Wu H. Abnormality of mussel in the early developmental stages induced by graphene and triphenyl phosphate: In silico toxicogenomic data-mining, in vivo, and toxicity pathway-oriented approach. AQUATIC TOXICOLOGY (AMSTERDAM, NETHERLANDS) 2023;263:106674. [PMID: 37666107 DOI: 10.1016/j.aquatox.2023.106674] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 08/25/2023] [Accepted: 08/27/2023] [Indexed: 09/06/2023]
5
Pedroni L, Dorne JLCM, Dall'Asta C, Dellafiora L. An in silico insight on the mechanistic aspects of gelsenicine toxicity: A reverse screening study pointing to the possible involvement of acetylcholine binding receptor. Toxicol Lett 2023;386:1-8. [PMID: 37683806 DOI: 10.1016/j.toxlet.2023.09.003] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 08/28/2023] [Accepted: 09/05/2023] [Indexed: 09/10/2023]
6
Wang SS, Lin P, Wang CC, Lin YC, Tung CW. Machine learning for predicting chemical migration from food packaging materials to foods. Food Chem Toxicol 2023:113942. [PMID: 37451598 DOI: 10.1016/j.fct.2023.113942] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Revised: 06/26/2023] [Accepted: 07/11/2023] [Indexed: 07/18/2023]
7
Baralić K, Živančević K, Marić Đ, Bozic D, Buha Djordjevic A, Antonijević Miljaković E, Ćurčić M, Bulat Z, Antonijević B, Đukić-Ćosić D. Testing sulforaphane as a strategy against toxic chemicals of public health concern by toxicogenomic data analysis: Friend or foe at the gene level - Colorectal carcinoma case study. ENVIRONMENTAL RESEARCH 2023;227:115818. [PMID: 37004859 DOI: 10.1016/j.envres.2023.115818] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/05/2023] [Revised: 03/29/2023] [Accepted: 03/30/2023] [Indexed: 05/08/2023]
8
Balasubramanian S, Duraikannan V, Perumal E. Toxicogenomic analysis of physiologically important metals: An integrated in silico approach. Food Chem Toxicol 2023:113895. [PMID: 37328090 DOI: 10.1016/j.fct.2023.113895] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2023] [Revised: 05/30/2023] [Accepted: 06/10/2023] [Indexed: 06/18/2023]
9
Recio-Vega R, Facio-Campos RA, Hernández-González SI, Olivas-Calderón E. State of the Art of Genomic Technology in Toxicology: A Review. Int J Mol Sci 2023;24:ijms24119618. [PMID: 37298568 DOI: 10.3390/ijms24119618] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2023] [Revised: 05/23/2023] [Accepted: 05/30/2023] [Indexed: 06/12/2023]  Open
10
Kan HL, Tung CW, Chang SE, Lin YC. In silico prediction of parkinsonian motor deficits-related neurotoxicants based on the adverse outcome pathway concept. Arch Toxicol 2022;96:3305-3314. [PMID: 36175685 DOI: 10.1007/s00204-022-03376-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Accepted: 09/07/2022] [Indexed: 11/02/2022]
11
Chou CY, Lin P, Kim J, Wang SS, Wang CC, Tung CW. Ensemble learning for predicting ex vivo human placental barrier permeability. BMC Bioinformatics 2022;22:629. [PMID: 36138350 PMCID: PMC9502578 DOI: 10.1186/s12859-022-04937-y] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Accepted: 09/16/2022] [Indexed: 11/10/2022]  Open
12
Joint impact of key air pollutants on COVID-19 severity: prediction based on toxicogenomic data analysis. ARHIV ZA HIGIJENU RADA I TOKSIKOLOGIJU 2022;73:119-125. [PMID: 35792766 PMCID: PMC9287838 DOI: 10.2478/aiht-2022-73-3631] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Accepted: 05/01/2022] [Indexed: 11/20/2022]
13
Zhang Y, Zhang M, Yu W, Li J, Kong D. Ecotoxicological risk ranking of 19 metals in the lower Yangtze River of China based on their threats to aquatic wildlife. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022;812:152370. [PMID: 34915017 DOI: 10.1016/j.scitotenv.2021.152370] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/08/2021] [Revised: 12/09/2021] [Accepted: 12/09/2021] [Indexed: 06/14/2023]
14
Wang CC, Liang YC, Wang SS, Lin P, Tung CW. A machine learning-driven approach for prioritizing food contact chemicals of carcinogenic concern based on complementary in silico methods. Food Chem Toxicol 2022;160:112802. [PMID: 34979167 DOI: 10.1016/j.fct.2021.112802] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 12/15/2021] [Accepted: 12/28/2021] [Indexed: 10/19/2022]
15
Živančević K, Baralić K, Bozic D, Miljaković EA, Djordjević AB, Ćurčić M, Bulat Z, Antonijević B, Bulat P, Đukić-Ćosić D. Involvement of environmentally relevant toxic metal mixture in Alzheimer's disease pathway alteration and protective role of berberine: Bioinformatics analysis and toxicogenomic screening. Food Chem Toxicol 2022;161:112839. [DOI: 10.1016/j.fct.2022.112839] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2021] [Revised: 12/22/2021] [Accepted: 01/22/2022] [Indexed: 02/07/2023]
16
Liang PI, Wang CC, Cheng HJ, Wang SS, Lin YC, Lin P, Tung CW. Curation of cancer hallmark-based genes and pathways for in silico characterization of chemical carcinogenesis. DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 2021;2020:5857494. [PMID: 32539087 PMCID: PMC7294774 DOI: 10.1093/database/baaa045] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/16/2020] [Revised: 05/10/2020] [Accepted: 05/19/2020] [Indexed: 01/19/2023]
17
Živančević K, Baralić K, Jorgovanović D, Buha Djordjević A, Ćurčić M, Antonijević Miljaković E, Antonijević B, Bulat Z, Đukić-Ćosić D. Elucidating the influence of environmentally relevant toxic metal mixture on molecular mechanisms involved in the development of neurodegenerative diseases: In silico toxicogenomic data-mining. ENVIRONMENTAL RESEARCH 2021;194:110727. [PMID: 33465344 DOI: 10.1016/j.envres.2021.110727] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2020] [Revised: 12/14/2020] [Accepted: 01/05/2021] [Indexed: 06/12/2023]
18
Kan HL, Wang CC, Lin YC, Tung CW. Computational identification of preservatives with potential neuronal cytotoxicity. Regul Toxicol Pharmacol 2020;119:104815. [PMID: 33159970 DOI: 10.1016/j.yrtph.2020.104815] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2020] [Revised: 10/17/2020] [Accepted: 10/30/2020] [Indexed: 11/28/2022]
19
Baralić K, Jorgovanović D, Živančević K, Antonijević Miljaković E, Antonijević B, Buha Djordjevic A, Ćurčić M, Đukić-Ćosić D. Safety assessment of drug combinations used in COVID-19 treatment: in silico toxicogenomic data-mining approach. Toxicol Appl Pharmacol 2020;406:115237. [PMID: 32920000 PMCID: PMC7483129 DOI: 10.1016/j.taap.2020.115237] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Revised: 07/11/2020] [Accepted: 09/08/2020] [Indexed: 12/28/2022]
20
Wang CC, Lin P, Chou CY, Wang SS, Tung CW. Prediction of human fetal-maternal blood concentration ratio of chemicals. PeerJ 2020;8:e9562. [PMID: 32742813 PMCID: PMC7380269 DOI: 10.7717/peerj.9562] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Accepted: 06/26/2020] [Indexed: 12/13/2022]  Open
21
Bolt HM, Hengstler JG. The rapid development of computational toxicology. Arch Toxicol 2020;94:1371-1372. [PMID: 32382955 PMCID: PMC7261728 DOI: 10.1007/s00204-020-02768-5] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Accepted: 04/28/2020] [Indexed: 11/15/2022]
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