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Botti A, Musmeci E, Negroni A, Capuozzo R, Fava F, Biagi E, Zanaroli G. Site-specific response of sediment microbial community to supplementation of polyhydroxyalkanoates as biostimulants for PCB reductive dechlorination. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 898:165485. [PMID: 37442469 DOI: 10.1016/j.scitotenv.2023.165485] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Revised: 06/23/2023] [Accepted: 07/10/2023] [Indexed: 07/15/2023]
Abstract
The use of biodegradable plastics is constantly raising, increasing the likeliness for these polymers to end up in the environment. Environmental applications foreseeing the intentional release of biodegradable plastics have been also recently proposed, e.g., for polyhydroxyalkanoates (PHAs) acting as slow hydrogen releasing compounds to stimulate microbial reductive dehalogenation processes. However, the effects of their release into the environment on the ecosystems still need to be thoroughly explored. In this work, the use of PHAs to enhance the microbial reductive dechlorination of polychlorobiphenyls (PCBs) and their impact on the metabolic and compositional features of the resident microbial community have been investigated in laboratory microcosms of a polluted marine sediment from Mar Piccolo (Taranto, Italy), and compared with recent findings on a different contaminated marine sediment from Pialassa della Baiona (Ravenna, Italy). A decreased biostimulation efficiency of PHAs on PCBs reductive dechlorination was observed in the sediment from Mar Piccolo, with respect to the sediment from Pialassa della Baiona, suggesting that the sediments' physical-chemical characteristics and/or the biodiversity and composition of its microbial community might play a key role in determining the outcome of this biostimulation strategy. Regardless of the sediment origin, PHAs were found to have a specific and pervasive effect on the sediment microbial community, reducing its biodiversity, defining a newly arranged microbial core of primary degraders and consequently affecting, in a site-specific way, the abundance of subdominant bacteria, possibly cross-feeders. Such potential to dramatically change the structure of autochthonous microbial communities should be carefully considered, since it might have secondary effects, e.g., on the natural biogeochemical cycles.
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Affiliation(s)
- Alberto Botti
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Eliana Musmeci
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Andrea Negroni
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Rosaria Capuozzo
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Fabio Fava
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Elena Biagi
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy.
| | - Giulio Zanaroli
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
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2
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Mohana Rangan S, Rao S, Robles A, Mouti A, LaPat-Polasko L, Lowry GV, Krajmalnik-Brown R, Delgado AG. Decoupling Fe 0 Application and Bioaugmentation in Space and Time Enables Microbial Reductive Dechlorination of Trichloroethene to Ethene: Evidence from Soil Columns. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:4167-4179. [PMID: 36866930 PMCID: PMC10018760 DOI: 10.1021/acs.est.2c06433] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2022] [Revised: 12/28/2022] [Accepted: 02/14/2023] [Indexed: 06/06/2023]
Abstract
Fe0 is a powerful chemical reductant with applications for remediation of chlorinated solvents, including tetrachloroethene and trichloroethene. Its utilization efficiency at contaminated sites is limited because most of the electrons from Fe0 are channeled to the reduction of water to H2 rather than to the reduction of the contaminants. Coupling Fe0 with H2-utilizing organohalide-respiring bacteria (i.e., Dehalococcoides mccartyi) could enhance trichloroethene conversion to ethene while maximizing Fe0 utilization efficiency. Columns packed with aquifer materials have been used to assess the efficacy of a treatment combining in space and time Fe0 and aD. mccartyi-containing culture (bioaugmentation). To date, most column studies documented only partial conversion of the solvents to chlorinated byproducts, calling into question the feasibility of Fe0 to promote complete microbial reductive dechlorination. In this study, we decoupled the application of Fe0 in space and time from the addition of organic substrates andD. mccartyi-containing cultures. We used a column containing soil and Fe0 (at 15 g L-1 in porewater) and fed it with groundwater as a proxy for an upstream Fe0 injection zone dominated by abiotic reactions and biostimulated/bioaugmented soil columns (Bio-columns) as proxies for downstream microbiological zones. Results showed that Bio-columns receiving reduced groundwater from the Fe0-column supported microbial reductive dechlorination, yielding up to 98% trichloroethene conversion to ethene. The microbial community in the Bio-columns established with Fe0-reduced groundwater also sustained trichloroethene reduction to ethene (up to 100%) when challenged with aerobic groundwater. This study supports a conceptual model where decoupling the application of Fe0 and biostimulation/bioaugmentation in space and/or time could augment microbial trichloroethene reductive dechlorination, particularly under oxic conditions.
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Affiliation(s)
- Srivatsan Mohana Rangan
- School
of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
- Center
for Bio-Mediated and Bio-Inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona 85281, United States
- Biodesign
Center for Health Through Microbiomes, Arizona
State University, Tempe, Arizona 85287, United States
| | - Shefali Rao
- School
of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
- Center
for Bio-Mediated and Bio-Inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona 85281, United States
| | - Aide Robles
- School
of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
- Center
for Bio-Mediated and Bio-Inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona 85281, United States
| | - Aatikah Mouti
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
| | | | - Gregory V. Lowry
- Center
for Environmental Implications of Nanotechnology (CEINT), Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
- Department
of Civil & Environmental Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Rosa Krajmalnik-Brown
- School
of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
- Center
for Bio-Mediated and Bio-Inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona 85281, United States
- Biodesign
Center for Health Through Microbiomes, Arizona
State University, Tempe, Arizona 85287, United States
| | - Anca G. Delgado
- School
of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Biodesign
Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
- Center
for Bio-Mediated and Bio-Inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona 85281, United States
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3
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Botti A, Biagi E, Musmeci E, Breglia A, Degli Esposti M, Fava F, Zanaroli G. Effect of polyhydroxyalkanoates on the microbial reductive dechlorination of polychlorinated biphenyls and competing anaerobic respirations in a marine microbial culture. MARINE POLLUTION BULLETIN 2023; 186:114458. [PMID: 36493518 DOI: 10.1016/j.marpolbul.2022.114458] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2022] [Revised: 10/26/2022] [Accepted: 11/28/2022] [Indexed: 06/17/2023]
Abstract
The effect of polyhydroxyalkanoates (PHAs) with different composition on the reductive dechlorination activity of a polychlorinated biphenyls (PCBs) dechlorinating marine microbial community and on the activity of sulfate-reducing (SRB) and methanogenic bacteria (MB), were investigated in marine sediment microcosms and compared with the main monomer, 3-hydroxybutyric acid (3HB). Despite PHAs were fermented more slowly than 3HB, all electron donors stimulated constantly sulfate-reduction, methanogenesis and, only transiently, PCB reductive dechlorination. No relevant differences were observed with different compositions of PHAs. According to electron balances, the majority of the supplied electrons (50 %) were consumed by SRB and to less extent by MB (9-31 %), while a small percentage (0.01 %) was delivered to OHRB. In the studied conditions PHAs were confirmed as potential slow‑hydrogen releasing compounds in marine environment but their fermentation rate was sufficiently high to mainly stimulate the competitors of organohalide respring bacteria for electron donors.
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Affiliation(s)
- Alberto Botti
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Elena Biagi
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Eliana Musmeci
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Alessia Breglia
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Micaela Degli Esposti
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Fabio Fava
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy
| | - Giulio Zanaroli
- Dept. of Civil, Chemical, Environmental and Material Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131 Bologna, Italy.
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Rosato A, Barone M, Negroni A, Brigidi P, Fava F, Biagi E, Candela M, Zanaroli G. Bacterial colonization dynamics of different microplastic types in an anoxic salt marsh sediment and impact of adsorbed polychlorinated biphenyls on the plastisphere. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 315:120411. [PMID: 36240963 DOI: 10.1016/j.envpol.2022.120411] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Revised: 09/14/2022] [Accepted: 10/06/2022] [Indexed: 06/16/2023]
Abstract
Plastic debris dispersed into the environment provide a substrate for microbial colonization, constituting a new human-made ecosystem called "plastisphere", and altering the microbial species distribution in aquatic, coastal and benthic ecosystems. The study aims at exploring the interaction among microplastics (MPs) made of different polymers, a persistent organic contaminant (polychlorinated biphenyls, PCBs), and the environmental microbial communities, in an anoxic marine sediment. Plastic pellets were incubated in the field in a salt marsh anoxic sediment, to observe the stages of plastisphere formation, by quantitative PCR and 16S rRNA gene sequencing, and PCB dechlorination activity on the MPs surface. Microbes from the sediment rapidly colonized the different microplastics types, with PVC recruiting a peculiar community enriched in sulfate-reducing bacteria. The composition of the plastisphere varied along the 1-year incubation possibly in response either to warmer temperatures in spring-summer or to microhabitat's changes due to the progressive plastic surface weathering. Even if PCB contaminated MPs were able to recruit potentially dehalogenating taxa, actual dechlorination was not detectable after 1 year. This suggests that the concentration of potentially dehalorespiring bacteria in the natural environment could be too low for the onset of the dechlorination process on MP-sorbed contaminants. Our study, which is among very few available longitudinally exploring the plastisphere composition in an anoxic sediment context, is the first exploring the fate and possible biodegradation of persistent organic pollutants sorbed on MPs reaching the seafloor.
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Affiliation(s)
- Antonella Rosato
- Dept. of Civil, Chemical, Environmental and Materials Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131, Bologna, Italy
| | - Monica Barone
- Dept. of Pharmacy and Biotechnology (FaBit), Alma Mater Studiorum University of Bologna, Via Belmeloro 6, 40126, Bologna, Italy; Dept. of Medical and Surgical Sciences (DIMEC), Alma Mater Studiorum University of Bologna, Via Massarenti 9, 40138, Bologna, Italy
| | - Andrea Negroni
- Dept. of Civil, Chemical, Environmental and Materials Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131, Bologna, Italy
| | - Patrizia Brigidi
- Dept. of Medical and Surgical Sciences (DIMEC), Alma Mater Studiorum University of Bologna, Via Massarenti 9, 40138, Bologna, Italy
| | - Fabio Fava
- Dept. of Civil, Chemical, Environmental and Materials Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131, Bologna, Italy
| | - Elena Biagi
- Dept. of Civil, Chemical, Environmental and Materials Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131, Bologna, Italy
| | - Marco Candela
- Dept. of Pharmacy and Biotechnology (FaBit), Alma Mater Studiorum University of Bologna, Via Belmeloro 6, 40126, Bologna, Italy
| | - Giulio Zanaroli
- Dept. of Civil, Chemical, Environmental and Materials Engineering (DICAM), Alma Mater Studiorum University of Bologna, Via Terracini 28, 40131, Bologna, Italy.
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Meinel M, Delgado AG, Ilhan ZE, Aguero ML, Aguiar S, Krajmalnik-Brown R, Torres CI. Organic carbon metabolism is a main determinant of hydrogen demand and dynamics in anaerobic soils. CHEMOSPHERE 2022; 303:134877. [PMID: 35577129 DOI: 10.1016/j.chemosphere.2022.134877] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2022] [Revised: 04/29/2022] [Accepted: 05/04/2022] [Indexed: 06/15/2023]
Abstract
Hydrogen (H2) is a crucial electron donor for many processes in the environment including nitrate-, sulfate- and, iron-reduction, homoacetogenesis, and methanogenesis, and is a major determinant of microbial competition and metabolic pathways in groundwater, sediments, and soils. Despite the importance of H2 for many microbial processes in the environment, the total H2 consuming capacity (or H2 demand) of soils is generally unknown. Using soil microcosms with added H2, the aims of this study were 1) to measure the H2 demand of geochemically diverse soils and 2) to define the processes leading to this demand. Study results documented a large range of H2 demand in soil (0.034-1.2 millielectron equivalents H2 g-1 soil). The measured H2 demand greatly exceeded the theoretical demand predicted based on measured concentrations of common electron acceptors initially present in a library of 15 soils. While methanogenesis accounted for the largest fraction of H2 demand, humic acid reduction and acetogenesis were also significant contributing H2-consuming processes. Much of the H2 demand could be attributed to CO2 produced during incubation from fermentation and/or acetoclastic methanogenesis. The soil initial total organic carbon showed the strongest correlation to H2 demand. Besides external additions, H2 was likely generated or cycled in the microcosms. Apart from fermentative H2 production, carboxylate elongation to produce C4-C7 fatty acids may have accounted for additional H2 production in these soils. Many of these processes, especially the organic carbon contribution is underestimated in microbial models for H2 consumption in natural soil ecosystems or during bioremediation of contaminants in soils.
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Affiliation(s)
- Megan Meinel
- Arizona State University, Biodesign Swette Center for Environmental Biotechnology, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, School of Sustainable Engineering and the Built Environment, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), 1001 S McAllister Ave, Tempe, AZ, USA
| | - Anca G Delgado
- Arizona State University, Biodesign Swette Center for Environmental Biotechnology, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, School of Sustainable Engineering and the Built Environment, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), 1001 S McAllister Ave, Tempe, AZ, USA
| | - Zehra Esra Ilhan
- Arizona State University, Biodesign Swette Center for Environmental Biotechnology, 1001 S McAllister Ave, Tempe, AZ, USA
| | - Marisol Luna Aguero
- Arizona State University, Biodesign Swette Center for Environmental Biotechnology, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, School of Sustainable Engineering and the Built Environment, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), 1001 S McAllister Ave, Tempe, AZ, USA
| | - Samuel Aguiar
- Arizona State University, Biodesign Swette Center for Environmental Biotechnology, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), 1001 S McAllister Ave, Tempe, AZ, USA
| | - Rosa Krajmalnik-Brown
- Arizona State University, Biodesign Swette Center for Environmental Biotechnology, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, School of Sustainable Engineering and the Built Environment, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, Biodesign Center for Health Through Microbiomes, 1001 S McAllister Ave, Tempe, AZ, USA.
| | - César I Torres
- Arizona State University, Biodesign Swette Center for Environmental Biotechnology, 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), 1001 S McAllister Ave, Tempe, AZ, USA; Arizona State University, School for Engineering of Matter, Transport & Energy, 1001 S McAllister Ave, Tempe, AZ, USA.
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6
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Wang J, Wu S, Yang Q, Gu Y, Wang P, Li Z, Li L. Performance and mechanism of the in situ restoration effect on VHCs in the polluted river water based on the orthogonal experiment: photosynthetic fluorescence characteristics and microbial community analysis. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:43004-43018. [PMID: 35094283 DOI: 10.1007/s11356-022-18845-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2021] [Accepted: 01/20/2022] [Indexed: 06/14/2023]
Abstract
Volatile halogenated hydrocarbons (VHCs) attracted many attentions due to its toxicity and persistence in the environment. In this research, a novel in situ ecological restoration reactor was applied to the degradation of VHCs in polluted river water. The optimized working condition adaptation of the in situ restoration technique was evaluated through orthogonal tests. The experiments showed that when the water depth was 0.4 m, the HRT was 5 days, and the current velocity was 1 m/s, the optimal removal efficiency of VHCs in the reactor was achieved. And the removal rates of CHCl3, CCl4, C2HCl3, and C2Cl4 reached 70.27%, 70.59%, 67.74%, and 81.82%, respectively. The results showed that both HRT and water depth were significantly related to the removal efficiency of reactor. The physiological state of the plants was analyzed by fitting rapid light curve (RLC) model, which showed that the accumulation of VHCs inhibited the photosynthetic performance of plants. Moreover, the microbial community structures of fillers were tested by high-throughput sequencing, and the findings supported that the microbial community made a great response to adapt to the changes in environment of the reactor. The relative abundance of Rhodocyclaceae increased slightly, which hinted that it had good adaptability to VHCs in polluted river water. The research results confirmed that in situ ecological restoration reactor was a potential approach for removal VHCs in polluted river water.
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Affiliation(s)
- Jia Wang
- School of Water Resources and Environment, China University of Geosciences (Beijing), Beijing, 100083, China
- Beijing Institute of Water Science and Technology, Beijing, 100048, China
| | - Shuangrong Wu
- College of Civil and Architectural Engineering, Tangshan University, Tangshan, 063000, China
| | - Qi Yang
- School of Water Resources and Environment, China University of Geosciences (Beijing), Beijing, 100083, China.
| | - Yonggang Gu
- Beijing Institute of Water Science and Technology, Beijing, 100048, China.
| | - Peijing Wang
- Beijing Institute of Water Science and Technology, Beijing, 100048, China
| | - Zhaoxin Li
- Beijing Institute of Water Science and Technology, Beijing, 100048, China
| | - Lei Li
- Beijing Institute of Water Science and Technology, Beijing, 100048, China
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7
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Lin WH, Chen CC, Ou JH, Sheu YT, Hou D, Kao CM. Bioremediation of hexavalent-chromium contaminated groundwater: Microcosm, column, and microbial diversity studies. CHEMOSPHERE 2022; 295:133877. [PMID: 35131270 DOI: 10.1016/j.chemosphere.2022.133877] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Revised: 12/11/2021] [Accepted: 02/02/2022] [Indexed: 06/14/2023]
Abstract
Sulfate reducing bacteria (SRB) have the capability of bioreducing hexavalent chromium [Cr(VI)] to trivalent chromium [Cr(III)] under sulfate-reducing conditions for toxicity reduction. However, a high amount of sulfate addition would cause elevated sulfide production, which could inhibit the growth of SRB and result in reduced Cr(VI) bioreduction efficiency. A slow release reagent, viscous carbon and sulfate-releasing colloidal substrates (VCSRCS), was prepared for a long-lasting carbon and sulfate supplement. In the column study, VCSRCS was injected into the column system to form a VCSRCS biobarrier for Cr(VI) containment and bioreduction. A complete Cr(VI) removal was observed via the adsorption and bioreduction mechanisms in the column with VCSRCS addition. Results from X-ray diffractometer analyses indicate that Cr(OH)3(s) and Cr2O3(s) were detected in precipitates, indicating the occurrence of Cr(VI) reduction followed by Cr(III) precipitation. Results from the Fourier-transform infrared spectroscopy analyses show that cell deposits carried functional groups, which could adsorb Cr. Addition of VCSRCS caused increased populations of total bacteria and dsrA, which also enhanced Cr(VI) reduction. Microbial diversity results indicate that VCSRCS addition resulted in the growth of Cr(VI)-reducing bacteria including Exiguobacterium, Citrobacter, Aerococcus, and SRB. Results of this study will be helpful in developing an effective and green VCSRCS biobarrier for the bioremediation of Cr(VI)-polluted groundwater.
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Affiliation(s)
- Wei-Han Lin
- School of Environment, Tsinghua University, Beijing, China
| | - Chien-Cheng Chen
- Department of Biotechnology, National Kaohsiung Normal University, Kaohsiung, Taiwan
| | - Jiun-Hau Ou
- Institute of Environmental Engineering, National Sun Yat-Sen University, Kaohsiung, Taiwan
| | - Yih-Terng Sheu
- General Education Center, National University of Kaohsiung, Kaohsiung, Taiwan
| | - Deyi Hou
- School of Environment, Tsinghua University, Beijing, China.
| | - Chih-Ming Kao
- Institute of Environmental Engineering, National Sun Yat-Sen University, Kaohsiung, Taiwan.
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8
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Robles A, Yellowman TL, Joshi S, Mohana Rangan S, Delgado AG. Microbial Chain Elongation and Subsequent Fermentation of Elongated Carboxylates as H 2-Producing Processes for Sustained Reductive Dechlorination of Chlorinated Ethenes. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2021; 55:10398-10410. [PMID: 34283573 DOI: 10.1021/acs.est.1c01319] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
In situ anaerobic groundwater bioremediation of trichloroethene (TCE) to nontoxic ethene is contingent on organohalide-respiring Dehalococcoidia, the most common strictly hydrogenotrophic Dehalococcoides mccartyi (D. mccartyi). The H2 requirement for D. mccartyi is fulfilled by adding various organic substrates (e.g., lactate, emulsified vegetable oil, and glucose/molasses), which require fermenting microorganisms to convert them to H2. The net flux of H2 is a crucial controlling parameter in the efficacy of bioremediation. H2 consumption by competing microorganisms (e.g., methanogens and homoacetogens) can diminish the rates of reductive dechlorination or stall the process altogether. Furthermore, some fermentation pathways do not produce H2 or having H2 as a product is not always thermodynamically favorable under environmental conditions. Here, we report on a novel application of microbial chain elongation as a H2-producing process for reductive dechlorination. In soil microcosms bioaugmented with dechlorinating and chain-elongating enrichment cultures, near stoichiometric conversion of TCE (0.07 ± 0.01, 0.60 ± 0.03, and 1.50 ± 0.20 mmol L-1 added sequentially) to ethene was achieved when initially stimulated by chain elongation of acetate and ethanol. Chain elongation initiated reductive dechlorination by liberating H2 in the conversion of acetate and ethanol to butyrate and caproate. Syntrophic fermentation of butyrate, a chain-elongation product, to H2 and acetate further sustained the reductive dechlorination activity. Methanogenesis was limited during TCE dechlorination in soil microcosms and absent in transfer cultures fed with chain-elongation substrates. This study provides critical fundamental knowledge toward the feasibility of chlorinated solvent bioremediation based on microbial chain elongation.
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Affiliation(s)
- Aide Robles
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Ave., Tempe, Arizona 85287, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics, Arizona State University, Tempe, Arizona 85281, United States
| | - Theodora L Yellowman
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Ave., Tempe, Arizona 85287, United States
- Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics, Arizona State University, Tempe, Arizona 85281, United States
| | - Sayalee Joshi
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Ave., Tempe, Arizona 85287, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics, Arizona State University, Tempe, Arizona 85281, United States
| | - Srivatsan Mohana Rangan
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Ave., Tempe, Arizona 85287, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics, Arizona State University, Tempe, Arizona 85281, United States
| | - Anca G Delgado
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, 1001 S. McAllister Ave., Tempe, Arizona 85287, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Engineering Research Center for Bio-mediated and Bio-inspired Geotechnics, Arizona State University, Tempe, Arizona 85281, United States
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9
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Mohana Rangan S, Krajmalnik-Brown R, Delgado AG. An Ion Chromatography Method for Simultaneous Quantification of Chromate, Arsenate, Selenate, Perchlorate, and Other Inorganic Anions in Environmental Media. ENVIRONMENTAL ENGINEERING SCIENCE 2021; 38:626-634. [PMID: 34316248 PMCID: PMC8312025 DOI: 10.1089/ees.2020.0347] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/18/2020] [Accepted: 04/18/2021] [Indexed: 05/28/2023]
Abstract
Chromium (Cr) (VI) is a toxic, mutagenic, and carcinogenic water pollutant. The standard ion chromatography (IC) method for quantification of Cr (VI) in water samples is Environmental Protection Agency Method 218.7, which requires postcolumn derivatization with 1,5-diphenylcarbazide and UV-Vis spectroscopy detection. Method 218.7 is Cr (VI) specific; thus, it does not allow detection of co-occurring natural and anthropogenic anions in environmental media. In this study, we developed an isocratic IC method with suppressed conductivity detection, a Metrohm Metrosep A Supp 7 column, and sodium carbonate/acetonitrile as mobile phase for simultaneous quantification of Cr (VI),C l O 4 - , As (V) as arsenate, Se (VI) as selenate, and the common anions F-, Cl-,N O 2 - ,N O 3 - , andS O 4 2 - . The determination coefficient for every analyte was >0.99 and the method showed good accuracy in quantification. Cr (VI), As (V), Se (VI), andC l O 4 - limit of detection and limit of quantification were 0.1-0.6 μg/L and 0.5-2.1 μg/L, respectively. Recovery of Cr (VI) in various aqueous samples (tap water, surface water, groundwater, and wastewater) was between 97.2% and 102.8%. Overall, most analytes showed acceptable recovery (80-120%) in the environmental samples tested. The IC method was applied to track Cr (VI) and other anion concentrations in laboratory batch microcosms experiments with soil, surface water, and anaerobic medium. The IC method developed in this study should prove useful to environmental practitioners, academic and research organizations, and industries for monitoring low concentrations of multiple anions in environmental media, helping to decrease the sample requirement, time, and cost of analysis.
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Affiliation(s)
- Srivatsan Mohana Rangan
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona, USA
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona, USA
- Engineering Research Center for Bio-Mediated and Bio-Inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona, USA
| | - Rosa Krajmalnik-Brown
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona, USA
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona, USA
- Engineering Research Center for Bio-Mediated and Bio-Inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona, USA
| | - Anca G. Delgado
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona, USA
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona, USA
- Engineering Research Center for Bio-Mediated and Bio-Inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona, USA
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10
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Rangan SM, Mouti A, LaPat-Polasko L, Lowry GV, Krajmalnik-Brown R, Delgado AG. Synergistic Zerovalent Iron (Fe 0) and Microbiological Trichloroethene and Perchlorate Reductions Are Determined by the Concentration and Speciation of Fe. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:14422-14431. [PMID: 33151674 DOI: 10.1021/acs.est.0c05052] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Trichloroethene (TCE) and perchlorate (ClO4-) are cocontaminants at multiple Superfund sites. Fe0 is often used during TCE bioremediation with Dehalococcoides mccartyi to establish anoxic conditions in the aquifer. However, the synergy between Fe0 abiotic reactions and microbiological TCE and ClO4- reductions is poorly understood and seldom addressed in the literature. Here, we investigated the effects of Fe0 and its oxidation product, Fe2+, at field-relevant concentrations in promoting microbial TCE and ClO4- reductions. Using semibatch microcosms with a Superfund site soil and groundwater, we showed that the high Fe0 concentration (16.5 g L-1) expected during Fe0in situ injection mostly yielded TCE abiotic reduction to ethene/ethane. However, such concentrations obscured dechlorination by D. mccartyi, impeded ClO4- reduction, and enhanced SO42- reduction and methanogenesis. Fe2+ at 0.25 g L-1 substantially delayed conversion of TCE to ethene when compared to no-Fe controls. A low concentration of aged-Fe0 synergistically promoted microbiological TCE dechlorination to ethene while achieving complete ClO4- reduction. Collectively, these results illustrate scenarios relevant at or downstream of Fe0 injection zones when Fe0 is used to facilitate microbial dechlorination. Results also underscore the potential detrimental effects of Fe0 and bioaugmentation cultures coinjection for in situ treatment of chlorinated ethenes and ClO4-.
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Affiliation(s)
- Srivatsan Mohana Rangan
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
- Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona 85281, United States
| | - Aatikah Mouti
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
| | | | - Gregory V Lowry
- Center for Environmental Implications of Nanotechnology (CEINT) Durham, North Carolina 27708, United States
- Department of Civil & Environmental Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania 15213, United States
| | - Rosa Krajmalnik-Brown
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
- Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona 85281, United States
| | - Anca G Delgado
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona 85281, United States
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, Arizona 85287, United States
- Center for Bio-mediated and Bio-inspired Geotechnics (CBBG), Arizona State University, Tempe, Arizona 85281, United States
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11
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Wen LL, Li Y, Zhu L, Zhao HP. Influence of non-dechlorinating microbes on trichloroethene reduction based on vitamin B 12 synthesis in anaerobic cultures. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2020; 259:113947. [PMID: 31931416 DOI: 10.1016/j.envpol.2020.113947] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 09/28/2019] [Accepted: 01/07/2020] [Indexed: 06/10/2023]
Abstract
In this study, the YH consortium, an ethene-producing culture, was used to evaluate the effect of vitamin B12 (VB12) on trichloroethene (TCE) dechlorination by transferring the original TCE-reducing culture with or without adding exogenous VB12. Ultra-high performance liquid chromatography - tandem mass spectrometry (UPLC-MS/MS) was applied to detect the concentrations of VB12 and its lower ligand 5,6-dimethylbenzimidazole (DMB) in the cultures. After three successive VB12 starvation cycles, the dechlorination of TCE stopped mostly at cis-dichloroethene (cDCE), and no ethene was found; methane production increased significantly, and no VB12 was detected. Results suggest that the co-cultured microbes may not be able to provide enough VB12 as a cofactor for the growth of Dehalococcoides in the YH culture, possibly due to the competition for corrinoids between Dehalococcoides and methanogens. The relative abundances of 16 S rRNA gene of Dehalococcoides and reductive dehalogenase genes tceA or vcrA were lower in the cultures without VB12 compared with the cultures with VB12. VB12 limitation changed the microbial community structures of the consortia. In the absence of VB12, the microbial community shifted from dominance of Chloroflexi to Proteobacteria after three consecutive VB12 starvation cycles, and the dechlorinating genus Dehalococcoides declined from 42.9% to 13.5%. In addition, Geobacter, Clostridium, and Desulfovibrio were also present in the cultures without VB12. Furthermore, the abundance of archaea increased under VB12 limited conditions. Methanobacterium and Methanosarcina were the predominant archaea in the culture without VB12.
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Affiliation(s)
- Li-Lian Wen
- College of Resource and Environmental Science, Hubei University, Wuhan, 430062, China; MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Science, Zhejiang University, Hangzhou, 310058, China
| | - Yaru Li
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Science, Zhejiang University, Hangzhou, 310058, China
| | - Lizhong Zhu
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Science, Zhejiang University, Hangzhou, 310058, China
| | - He-Ping Zhao
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Science, Zhejiang University, Hangzhou, 310058, China.
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12
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Preparation and characterization of site-specific dechlorinating microbial inocula capable of complete dechlorination enriched in anaerobic microcosms amended with clay mineral. World J Microbiol Biotechnol 2020; 36:29. [PMID: 32016527 PMCID: PMC6997268 DOI: 10.1007/s11274-020-2806-7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Accepted: 01/22/2020] [Indexed: 11/21/2022]
Abstract
Abstract Short-chain halogenated aliphatic hydrocarbons (e.g. perchloroethene, trichloroethene) are among the most toxic environmental pollutants. Perchloroethene and trichloroethene can be dechlorinated to non-toxic ethene through reductive dechlorination by Dehalococcoides sp. Bioaugmentation, applying cultures containing organohalide-respiring microorganisms, is a possible technique to remediate sites contaminated with chlorinated ethenes. Application of site specific inocula is an efficient alternative solution. Our aim was to develop site specific dechlorinating microbial inocula by enriching microbial consortia from groundwater contaminated with trichloroethene using microcosm experiments containing clay mineral as solid phase. Our main goal was to develop fast and reliable method to produce large amount (100 L) of bioactive agent with anaerobic fermentation technology. Polyphasic approach has been applied to monitor the effectiveness of dechlorination during the transfer process from bench-scale (500 mL) to industrial-scale (100 L). Gas chromatography measurement and T-RFLP (Terminal Restriction Fragment Length Polymorphism) revealed that the serial subculture of the enrichments shortened the time-course of the complete dechlorination of trichloroethene to ethene and altered the composition of bacterial communities. Complete dechlorination was observed in enrichments with significant abundance of Dehalococcoides sp. cultivated at 8 °C. Consortia incubated in fermenters at 18 °C accelerated the conversion of TCE to ethene by 7–14 days. Members of the enrichments belong to the phyla Bacteroidetes, Chloroflexi, Proteobacteria and Firmicutes. According to the operational taxonomic units, main differences between the composition of the enrichment incubated at 8 °C and 18 °C occurred with relative abundance of acetogenic and fermentative species. In addition to the temperature, the site-specific origin of the microbial communities and the solid phase applied during the fermentation technique contributed to the development of a unique microbial composition. Graphic abstract ![]()
Electronic supplementary material The online version of this article (10.1007/s11274-020-2806-7) contains supplementary material, which is available to authorized users.
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13
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Lai YS, Ontiveros‐Valencia A, Coskun T, Zhou C, Rittmann BE. Electron‐acceptor loadings affect chloroform dechlorination in a hydrogen‐based membrane biofilm reactor. Biotechnol Bioeng 2019; 116:1439-1448. [DOI: 10.1002/bit.26945] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2018] [Revised: 01/24/2019] [Accepted: 01/30/2019] [Indexed: 11/09/2022]
Affiliation(s)
- YenJung Sean Lai
- School of Sustainable Engineering and the Built EnvironmentArizona State University, Biodesign InstituteTempe Arizona
| | - Aura Ontiveros‐Valencia
- School of Sustainable Engineering and the Built EnvironmentArizona State University, Biodesign InstituteTempe Arizona
- Present address: Escuela de Ingenieria y CienciasTecnologico de Monterrey, Campus PueblaPuebla Pue Mexico
| | - Tamer Coskun
- School of Sustainable Engineering and the Built EnvironmentArizona State University, Biodesign InstituteTempe Arizona
| | - Chen Zhou
- School of Sustainable Engineering and the Built EnvironmentArizona State University, Biodesign InstituteTempe Arizona
| | - Bruce E. Rittmann
- School of Sustainable Engineering and the Built EnvironmentArizona State University, Biodesign InstituteTempe Arizona
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14
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Clark K, Taggart DM, Baldwin BR, Ritalahti KM, Murdoch RW, Hatt JK, Löffler FE. Normalized Quantitative PCR Measurements as Predictors for Ethene Formation at Sites Impacted with Chlorinated Ethenes. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018; 52:13410-13420. [PMID: 30365883 PMCID: PMC6945293 DOI: 10.1021/acs.est.8b04373] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Quantitative PCR (qPCR) targeting Dehalococcoides mccartyi ( Dhc) biomarker genes supports effective management at sites impacted with chlorinated ethenes. To establish correlations between Dhc biomarker gene abundances and ethene formation (i.e., detoxification), 859 groundwater samples representing 62 sites undergoing monitored natural attenuation or enhanced remediation were analyzed. Dhc 16S rRNA genes and the vinyl chloride (VC) reductive dehalogenase genes bvcA and vcrA were detected in 88% and 61% of samples, respectively, from wells with ethene. Dhc 16S rRNA, bvcA, vcrA, and tceA (implicated in cometabolic reductive VC dechlorination) gene abundances all positively correlated with ethene formation. Significantly greater ethene concentrations were observed when Dhc 16S rRNA gene and VC RDase gene abundances exceeded 107 and 106 copies L-1, respectively, and when Dhc 16S rRNA- and bvcA + vcrA-to-total bacterial 16S rRNA gene ratios exceeded 0.1%. Dhc 16S rRNA gene-to- vcrA/ bvcA ratios near unity also indicated elevated ethene; however, no increased ethene was observed in 19 wells where vcrA and/or bvcA gene copy numbers exceeded Dhc cell numbers 10- to 10 000-fold. Approximately one-third of samples with detectable ethene lacked bvcA, vcrA, and tceA, suggesting that comprehensive understanding of VC detoxification biomarkers has not been achieved. Although the current biomarker suite is incomplete, the data analysis corroborates the value of the available Dhc DNA biomarkers for prognostic and diagnostic groundwater monitoring at sites impacted with chlorinated ethenes.
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Affiliation(s)
- Katherine Clark
- Microbial Insights, Incorporated, 10515 Research Drive, Knoxville, Tennessee 37932, United States
| | - Dora M. Taggart
- Microbial Insights, Incorporated, 10515 Research Drive, Knoxville, Tennessee 37932, United States
| | - Brett R. Baldwin
- Microbial Insights, Incorporated, 10515 Research Drive, Knoxville, Tennessee 37932, United States
| | - Kirsti M. Ritalahti
- Center for Environmental Biotechnology, University of Tennessee, Knoxville, Tennessee 37996, United States
- Department of Microbiology, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Robert W. Murdoch
- Center for Environmental Biotechnology, University of Tennessee, Knoxville, Tennessee 37996, United States
| | - Janet K. Hatt
- School of Civil and Environmental Engineering, Atlanta, Georgia 30332-0512
| | - Frank E. Löffler
- Center for Environmental Biotechnology, University of Tennessee, Knoxville, Tennessee 37996, United States
- Department of Microbiology, University of Tennessee, Knoxville, Tennessee 37996, United States
- Department of Civil and Environmental Engineering, University of Tennessee, Knoxville, Tennessee 37996, United States
- Department of Biosystems Engineering & Soil Science, University of Tennessee, Knoxville, Tennessee 37996, United States
- Biosciences Division and Joint Institute for Biological Sciences (JIBS), Oak Ridge National Laboratory, Oak Ridge Tennessee 37831, United States
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15
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Wan H, Yi X, Liu X, Feng C, Dang Z, Wei C. Time-dependent bacterial community and electrochemical characterizations of cathodic biofilms in the surfactant-amended sediment-based bioelectrochemical reactor with enhanced 2,3,4,5-tetrachlorobiphenyl dechlorination. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2018; 236:343-354. [PMID: 29414357 DOI: 10.1016/j.envpol.2018.01.048] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2017] [Revised: 01/13/2018] [Accepted: 01/16/2018] [Indexed: 06/08/2023]
Abstract
Applying an electric field to stimulate the microbial reductive dechlorination of polychlorinated biphenyls (PCBs) represents a promising approach for bioremediation of PCB-contaminated sites. This study aimed to demonstrate the biocathodic film-facilitated reduction of PCB 61 in a sediment-based bioelectrochemical reactor (BER) and, more importantly, the characterizations of electrode-microbe interaction from microbial and electrochemical perspectives particularly in a time-dependent manner. The application of a cathodic potential (-0.45 V vs. SHE) significantly improved the rate and extent of PCB 61 dechlorination compared to the open-circuit scenario (without electrical stimulation), and the addition of an external surfactant further increased the dechlorination, with Tween 80 exerting more pronounced effects than rhamnolipid. The bacterial composition of the biofilms and the bioelectrochemical kinetics of the BERs were found to be time-dependent and to vary considerably with the incubation time and slightly with the coexistence of an external surfactant. Excellent correlations were observed between the dechlorination rate and the relative abundance of Dehalogenimonas, Dechloromonas, and Geobacter, the dechlorination rate and the cathodic current density recorded from the chronoamperometry tests, and the dechlorination rate and the charge transfer resistance derived from the electrochemical impedance tests, with respect to the 120 day-operation. After day 120, PCB 61 was resistant to further appreciable reduction, but substantial hydrogen production was detected, and the bacterial community and electrochemical parameters observed on day 180 were not distinctly different from those on day 120.
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Affiliation(s)
- Hui Wan
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Xiaoyun Yi
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; Guangdong Provincial Engineering and Technology Research Center for Environmental Risk Prevention and Emergency Disposal, South China University of Technology, Guangzhou 510006, PR China
| | - Xiaoping Liu
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Chunhua Feng
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; Guangdong Provincial Engineering and Technology Research Center for Environmental Risk Prevention and Emergency Disposal, South China University of Technology, Guangzhou 510006, PR China.
| | - Zhi Dang
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; Guangdong Provincial Engineering and Technology Research Center for Environmental Risk Prevention and Emergency Disposal, South China University of Technology, Guangzhou 510006, PR China
| | - Chaohai Wei
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; Guangdong Provincial Engineering and Technology Research Center for Environmental Risk Prevention and Emergency Disposal, South China University of Technology, Guangzhou 510006, PR China
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16
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Delgado AG, Fajardo-Williams D, Bondank E, Esquivel-Elizondo S, Krajmalnik-Brown R. Coupling Bioflocculation of Dehalococcoides mccartyi to High-Rate Reductive Dehalogenation of Chlorinated Ethenes. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2017; 51:11297-11307. [PMID: 28914537 DOI: 10.1021/acs.est.7b03097] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Continuous bioreactors operated at low hydraulic retention times have rarely been explored for reductive dehalogenation of chlorinated ethenes. The inability to consistently develop such bioreactors affects the way growth approaches for Dehalococcoides mccartyi bioaugmentation cultures are envisioned. It also affects interpretation of results from in situ continuous treatment processes. We report bioreactor performance and dehalogenation kinetics of a D. mccartyi-containing consortium in an upflow bioreactor. When fed synthetic groundwater at 11-3.6 h HRT, the upflow bioreactor removed >99.7% of the influent trichloroethene (1.5-2.8 mM) and produced ethene as the main product. A trichloroethene removal rate of 98.51 ± 0.05 me- equiv L-1 d-1 was achieved at 3.6 h HRT. D. mccartyi cell densities were 1013 and 1012 16S rRNA gene copies L-1 in the bioflocs and planktonic culture, respectively. When challenged with a feed of natural groundwater containing various competing electron acceptors and 0.3-0.4 mM trichloroethene, trichloroethene removal was sustained at >99.6%. Electron micrographs revealed that D. mccartyi were abundant within the bioflocs, not only in multispecies structures, but also as self-aggregated microcolonies. This study provides fundamental evidence toward the feasibility of upflow bioreactors containing D. mccartyi as high-density culture production tools or as a high-rate, real-time remediation biotechnology.
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Affiliation(s)
- Anca G Delgado
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University , Tempe, Arizona 85287-5701, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University , Tempe, Arizona 85287-3005, United States
| | - Devyn Fajardo-Williams
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University , Tempe, Arizona 85287-5701, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University , Tempe, Arizona 85287-3005, United States
| | - Emily Bondank
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University , Tempe, Arizona 85287-5701, United States
| | - Sofia Esquivel-Elizondo
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University , Tempe, Arizona 85287-5701, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University , Tempe, Arizona 85287-3005, United States
| | - Rosa Krajmalnik-Brown
- Biodesign Swette Center for Environmental Biotechnology, Arizona State University , Tempe, Arizona 85287-5701, United States
- School of Sustainable Engineering and the Built Environment, Arizona State University , Tempe, Arizona 85287-3005, United States
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17
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Wen LL, Chen JX, Fang JY, Li A, Zhao HP. Effects of 1,1,1-Trichloroethane and Triclocarban on Reductive Dechlorination of Trichloroethene in a TCE-Reducing Culture. Front Microbiol 2017; 8:1439. [PMID: 28824572 PMCID: PMC5541058 DOI: 10.3389/fmicb.2017.01439] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2017] [Accepted: 07/17/2017] [Indexed: 11/13/2022] Open
Abstract
Chlorinated compounds were generally present in the environment due to widespread use in the industry. A short-term study was performed to evaluate the effects of 1,1,1- trichloroethane (TCA) and triclocarban (TCC) on trichloroethene (TCE) removal in a reactor fed with lactate as the sole electron donor. Both TCA and TCC inhibited TCE reduction, but the TCC had a more pronounced effect compared to TCA. The TCE-reducing culture, which had never been exposed to TCA before, reductively dechlorinated TCA to 1,1-dichloroethane (DCA). Below 15 μM, TCA had little effect on the transformation of TCE to cis-dichloroethene (DCE); however, the reduction of cis-DCE and vinyl chloride (VC) were more sensitive to TCA, and ethene production was completely inhibited when the concentration of TCA was above 15 μM. In cultures amended with TCC, the reduction of TCE was severely affected, even at concentrations as low as 0.3 μM; all the cultures stalled at VC, and no ethene was detected. The cultures that fully transformed TCE to ethene contained 5.2–8.1% Dehalococcoides. Geobacter and Desulfovibrio, the bacteria capable of partially reducing TCE to DCE, were detected in all cultures, but both represented a larger proportion of the community in TCC-amended cultures. All cultures were dominated by Clostridium_sensu_stricto_7, a genus that belongs to Firmicutes with proportions ranging from 40.9% (in a high TCC (15 μM) culture) to 88.2%. Methanobacteria was detected at levels of 1.1–12.7%, except in cultures added with 15 and 30 μM TCA, in which they only accounted for ∼0.4%. This study implies further environmental factors needed to be considered in the successful bioremediation of TCE in contaminated sites.
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Affiliation(s)
- Li-Lian Wen
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang UniversityHangzhou, China.,Zhejiang Provincial Key Laboratory of Water Pollution Control and Environmental Safety, Zhejiang UniversityHangzhou, China
| | - Jia-Xian Chen
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang UniversityHangzhou, China.,Zhejiang Provincial Key Laboratory of Water Pollution Control and Environmental Safety, Zhejiang UniversityHangzhou, China
| | - Jia-Yi Fang
- College of Agriculture and Biotechnology, Zhejiang UniversityHangzhou, China
| | - Ang Li
- School of Environment, Harbin Institute of TechnologyHarbin, China
| | - He-Ping Zhao
- Department of Environmental Engineering, College of Environmental and Resource Sciences, Zhejiang UniversityHangzhou, China.,Zhejiang Provincial Key Laboratory of Water Pollution Control and Environmental Safety, Zhejiang UniversityHangzhou, China
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18
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Koelschbach JS, Mouttaki H, Pickl C, Heipieper HJ, Rachel R, Lawson PA, Meckenstock RU. Rectinema cohabitans gen. nov., sp. nov., a rod-shaped spirochaete isolated from an anaerobic naphthalene-degrading enrichment culture. Int J Syst Evol Microbiol 2017; 67:1288-1295. [DOI: 10.1099/ijsem.0.001799] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Affiliation(s)
- Janina S Koelschbach
- Helmholtz Zentrum München, Institute of Groundwater Ecology, Ingolstädter Landstr. 1, 85764 Neuherberg, Germany
- Universität Duisburg-Essen, Biofilm Centre, Universitätsstr. 5, 45141 Essen, Germany
| | - Housna Mouttaki
- Helmholtz Zentrum München, Institute of Groundwater Ecology, Ingolstädter Landstr. 1, 85764 Neuherberg, Germany
| | - Carolin Pickl
- Helmholtz Zentrum München, Institute of Groundwater Ecology, Ingolstädter Landstr. 1, 85764 Neuherberg, Germany
| | - Hermann J Heipieper
- Helmholtz Zentrum für Umweltforschung, Department of Environmental Biotechnology, Permoserstr. 15, 04318 Leipzig, Germany
| | - Reinhard Rachel
- Universität Regensburg, Zentrum für Elektronenmikroskopie der Fakultät für Biologie und Vorklinische Medizin, Universitätsstr. 31, 93053 Regensburg, Germany
| | - Paul A Lawson
- Department of Microbiology and Plant Biology, University of Oklahoma, Norman, OK 73019, USA
| | - Rainer U Meckenstock
- Universität Duisburg-Essen, Biofilm Centre, Universitätsstr. 5, 45141 Essen, Germany
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Dehalococcoides and general bacterial ecology of differentially trichloroethene dechlorinating flow-through columns. Appl Microbiol Biotechnol 2017; 101:4799-4813. [PMID: 28213734 DOI: 10.1007/s00253-017-8180-1] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2017] [Accepted: 02/03/2017] [Indexed: 10/20/2022]
Abstract
The diversity of Dehalococcoides mccartyi (Dhc) and/or other organohalide respiring or associated microorganisms in parallel, partial, or complete trichloroethene (TCE) dehalogenating systems has not been well described. The composition of Dhc populations and the associated bacterial community that developed over 7.5 years in the top layer (0-10 cm) of eight TCE-fed columns were examined using pyrosequencing. Columns biostimulated with one of three carbon sources, along with non-stimulated controls, developed into complete (ethene production, whey amended), partial (cis-dichloroethene (DCE) and VC, an emulsified oil with nonionic surfactant), limited (<5 % cis-DCE and 95 % TCE, an emulsified oil), and non- (controls) TCE dehalogenating systems. Bioaugmentation of one column of each treatment with Bachman Road enrichment culture did not change Dhc populations nor the eventual degree of TCE dehalogenation. Pyrosequencing revealed high diversity among Dhc strains. There were 13 OTUs that were represented by more than 1000 sequences each. Cornell group-related populations dominated in complete TCE dehalogenating columns, while Pinellas group related Dhc dominated in all other treatments. General microbial communities varied with biostimulation, and three distinct microbial communities were established: one each for whey, oils, and control treatments. Bacterial genera, including Dehalobacter, Desulfitobacterium, Sulfurospirillum, Desulfuromonas, and Geobacter, all capable of partial TCE dehalogenation, were abundant in the limited and partial TCE dehalogenating systems. Dhc strain diversity was wider than previously reported and their composition within the community varied significantly depending on the nature of the carbon source applied and/or changes in the Dhc associated partners that fostered different biogeochemical conditions across the columns.
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Yu H, Wan H, Feng C, Yi X, Liu X, Ren Y, Wei C. Microbial polychlorinated biphenyl dechlorination in sediments by electrical stimulation: The effect of adding acetate and nonionic surfactant. THE SCIENCE OF THE TOTAL ENVIRONMENT 2017; 580:1371-1380. [PMID: 28038879 DOI: 10.1016/j.scitotenv.2016.12.102] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2016] [Revised: 12/14/2016] [Accepted: 12/14/2016] [Indexed: 06/06/2023]
Abstract
The necessity for developing an efficient and cost-effective in situ bioremediation technology for sediments contaminated with polychlorinated biphenyls (PCBs) has prompted the application of low-voltage electrical fields to anaerobic digestion systems. Here we show that the use of a sediment-based bio-electrochemical reactor (BER) poised at a potential of -0.50V (vs. a standard calomel electrode, SCE) substantially enhanced the reduction of 2,3,4,5-tetrachlorobiphenyl (PCB 61) when acetate was added as a carbon source. The addition of surfactant Tween 80 to the BER further accelerated the PCB 61 transformation. The comparative study of closed- and open-circuit reactors demonstrated the enrichment conditions affecting the bacterial community structure, the dominant dechlorination metabolisms, and thus the extent, the rate and the products of the reduction of PCBs. The dominant bacterial dechlorinators detected in the BERs in the presence of acetate and Tween 80 are Dehalogenimonas, Dehalobacter, Sulfuricurvum, Dechloromonas and Geobacter, which should be responsible for PCB dechlorination. This study improves understanding of the key factors influencing dechlorination activity in sediment-based BERs polarized at a low potential, as well as the metabolic mechanisms dominating in the PCB dechlorination process.
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Affiliation(s)
- Hui Yu
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Hui Wan
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Chunhua Feng
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China; Guangdong Provincial Engineering and Technology Research Center for Environmental Risk Prevention and Emergency Disposal, South China University of Technology, Guangzhou 510006, PR China.
| | - Xiaoyun Yi
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Xiaoping Liu
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Yuan Ren
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
| | - Chaohai Wei
- The Key Lab of Pollution Control and Ecosystem Restoration in Industry Clusters, Ministry of Education, School of Environment and Energy, South China University of Technology, Guangzhou 510006, PR China
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Reiss RA, Guerra P, Makhnin O. Metagenome phylogenetic profiling of microbial community evolution in a tetrachloroethene-contaminated aquifer responding to enhanced reductive dechlorination protocols. Stand Genomic Sci 2016; 11:88. [PMID: 27980706 PMCID: PMC5131427 DOI: 10.1186/s40793-016-0209-z] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2016] [Accepted: 11/18/2016] [Indexed: 01/02/2023] Open
Abstract
Chlorinated solvent contamination of potable water supplies is a serious problem worldwide. Biostimulation protocols can successfully remediate chlorinated solvent contamination through enhanced reductive dechlorination pathways, however the process is poorly understood and sometimes stalls creating a more serious problem. Whole metagenome techniques have the potential to reveal details of microbial community changes induced by biostimulation. Here we compare the metagenome of a tetrachloroethene contaminated Environmental Protection Agency Superfund Site before and after the application of biostimulation protocols. Environmental DNA was extracted from uncultured microbes that were harvested by on-site filtration of groundwater one month prior to and five months after the injection of emulsified vegetable oil, nutrients, and hydrogen gas bioamendments. Pair-end libraries were prepared for high-throughput DNA sequencing and 90 basepairs from both ends of randomly fragmented 400 basepair DNA fragments were sequenced. Over 31 millions reads were annotated with Metagenome Rapid Annotation using Subsystem Technology representing 32 prokaryotic phyla, 869 genera, and 3,181 species. A 3.6 log2 fold increase in biomass as measured by DNA yield per mL water was measured, but there was a 9% decrease in the number of genera detected post-remediation. We apply Bayesian statistical methods to assign false discovery rates to fold-change abundance data and use Zipf’s power law to filter genera with low read counts. Plotting the log-rank against the log-fold-change facilitates the visualization of the changes in the community in response to the enhanced reductive dechlorination protocol. Members of the Archaea domain increased 4.7 log2 fold, dominated by methanogens. Prior to remediation, classes Alphaproteobacteria and Betaproteobacteria dominated the community but exhibit significant decreases five months after biostimulation. Geobacter and Sulfurospirillum replace “Sideroxydans” and Burkholderia as the most abundant genera. As a result of biostimulation, Deltaproteobacteria and Epsilonproteobacteria capable of dehalogenation, iron and sulfate reduction, and sulfur oxidation increase. Matches to thermophilic, haloalkane respiring archaea is evidence for additional species involved in biodegradation of chlorinated solvents. Additionally, potentially pathogenic bacteria increase, indicating that there may be unintended consequences of bioremediation.
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Affiliation(s)
- Rebecca A Reiss
- New Mexico Institute of Mining and Technology, 801 Leroy Place, Socorro, NM 87801 USA
| | - Peter Guerra
- AMEC Foster Wheeler Environment & Infrastructure, Inc, 8519 Jefferson NE, Albuquerque, NM 87113 USA
| | - Oleg Makhnin
- New Mexico Institute of Mining and Technology, 801 Leroy Place, Socorro, NM 87801 USA
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Wen LL, Yang Q, Zhang ZX, Yi YY, Tang Y, Zhao HP. Interaction of perchlorate and trichloroethene bioreductions in mixed anaerobic culture. THE SCIENCE OF THE TOTAL ENVIRONMENT 2016; 571:11-17. [PMID: 27449607 DOI: 10.1016/j.scitotenv.2016.07.122] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2016] [Revised: 07/17/2016] [Accepted: 07/17/2016] [Indexed: 06/06/2023]
Abstract
This work evaluated the interaction of perchlorate and trichloroethene (TCE), two common co-contaminants in groundwater, during bioreduction in serum bottles containing synthetic mineral salts media and microbial consortia. TCE at concentrations up to 0.3mM did not significantly affect perchlorate reduction; however, perchlorate concentrations higher than 0.1mM made the reduction of TCE significantly slower. Perchlorate primarily inhibited the reduction of vinyl chloride (VC, a daughter product of TCE) to ethene. Mechanistic analysis showed that the inhibition was mainly because perchlorate reduction is thermodynamically more favorable than reduction of TCE and its daughter products and not because of toxicity due to accumulation of dissolved oxygen produced during perchlorate reduction. As the initial perchlorate concentration increased from 0 to 600mg/L in a set of serum bottles, the relative abundance of Rhodocyclaceae (a putatively perchlorate-reducing genus) increased from 6.3 to 80.6%, while the relative abundance of Dehalococcoides, the only known genus that is able to reduce TCE all the way to ethene, significantly decreased. Similarly, the relative abundance of Proteobacteria (a phylum to which most known perchlorate-reducing bacteria belong) increased from 22% to almost 80%.
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Affiliation(s)
- Li-Lian Wen
- Department of Environmental Engineering, College of Environmental and Resource Science, Zhejiang University, Hangzhou, China; Zhejiang Prov Key Lab Water Pollut Control & Envi, Zhejiang University, Hangzhou, Zhejiang, China
| | - Qiang Yang
- Hangzhou Institute of Environmental Protection Science, Hangzhou, China
| | - Zhao-Xin Zhang
- Department of Environmental Engineering, College of Environmental and Resource Science, Zhejiang University, Hangzhou, China
| | - Yang-Yi Yi
- Department of Environmental Engineering, College of Environmental and Resource Science, Zhejiang University, Hangzhou, China
| | - Youneng Tang
- Department of Civil and Environmental Engineering, FAMU-FSU College of Engineering, Florida State University, Tallahassee, FL 32310-6046, USA
| | - He-Ping Zhao
- Department of Environmental Engineering, College of Environmental and Resource Science, Zhejiang University, Hangzhou, China; Zhejiang Prov Key Lab Water Pollut Control & Envi, Zhejiang University, Hangzhou, Zhejiang, China; Hangzhou Institute of Environmental Protection Science, Hangzhou, China.
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Impact of Ammonium on Syntrophic Organohalide-Respiring and Fermenting Microbial Communities. mSphere 2016; 1:mSphere00053-16. [PMID: 27303735 PMCID: PMC4894693 DOI: 10.1128/msphere.00053-16] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2016] [Accepted: 03/10/2016] [Indexed: 01/27/2023] Open
Abstract
Contamination with ammonium and chlorinated solvents has been reported in numerous subsurface environments, and these chemicals bring significant challenges for in situ bioremediation. Dehalococcoides mccartyi is able to reduce the chlorinated solvent trichloroethene to the nontoxic end product ethene. Fermentative bacteria are of central importance for organohalide respiration and bioremediation to provide D. mccartyi with H2, their electron donor, acetate, their carbon source, and other micronutrients. In this study, we found that high concentrations of ammonium negatively correlated with rates of trichloroethene reductive dehalogenation and fermentation. However, detoxification of trichloroethene to nontoxic ethene occurred even at ammonium concentrations typical of those found in animal waste (up to 2 g liter−1 NH4+-N). To date, hundreds of subsurface environments have been bioremediated through the unique metabolic capability of D. mccartyi. These findings extend our knowledge of D. mccartyi and provide insight for bioremediation of sites contaminated with chlorinated solvents and ammonium. Syntrophic interactions between organohalide-respiring and fermentative microorganisms are critical for effective bioremediation of halogenated compounds. This work investigated the effect of ammonium concentration (up to 4 g liter−1 NH4+-N) on trichloroethene-reducing Dehalococcoides mccartyi and Geobacteraceae in microbial communities fed lactate and methanol. We found that production of ethene by D. mccartyi occurred in mineral medium containing ≤2 g liter−1 NH4+-N and in landfill leachate. For the partial reduction of trichloroethene (TCE) to cis-dichloroethene (cis-DCE) at ≥1 g liter−1 NH4+-N, organohalide-respiring dynamics shifted from D. mccartyi and Geobacteraceae to mainly D. mccartyi. An increasing concentration of ammonium was coupled to lower metabolic rates, longer lag times, and lower gene abundances for all microbial processes studied. The methanol fermentation pathway to acetate and H2 was conserved, regardless of the ammonium concentration provided. However, lactate fermentation shifted from propionic to acetogenic at concentrations of ≥2 g liter−1 NH4+-N. Our study findings strongly support a tolerance of D. mccartyi to high ammonium concentrations, highlighting the feasibility of organohalide respiration in ammonium-contaminated subsurface environments. IMPORTANCE Contamination with ammonium and chlorinated solvents has been reported in numerous subsurface environments, and these chemicals bring significant challenges for in situ bioremediation. Dehalococcoides mccartyi is able to reduce the chlorinated solvent trichloroethene to the nontoxic end product ethene. Fermentative bacteria are of central importance for organohalide respiration and bioremediation to provide D. mccartyi with H2, their electron donor, acetate, their carbon source, and other micronutrients. In this study, we found that high concentrations of ammonium negatively correlated with rates of trichloroethene reductive dehalogenation and fermentation. However, detoxification of trichloroethene to nontoxic ethene occurred even at ammonium concentrations typical of those found in animal waste (up to 2 g liter−1 NH4+-N). To date, hundreds of subsurface environments have been bioremediated through the unique metabolic capability of D. mccartyi. These findings extend our knowledge of D. mccartyi and provide insight for bioremediation of sites contaminated with chlorinated solvents and ammonium.
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Wen LL, Zhang Y, Pan YW, Wu WQ, Meng SH, Zhou C, Tang Y, Zheng P, Zhao HP. The roles of methanogens and acetogens in dechlorination of trichloroethene using different electron donors. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2015; 22:19039-19047. [PMID: 26233753 DOI: 10.1007/s11356-015-5117-z] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2015] [Accepted: 07/22/2015] [Indexed: 06/04/2023]
Abstract
We evaluated the effects of methanogens and acetogens on the function and structure of microbial communities doing reductive dechlorination of trichloroethene (TCE) by adding four distinct electron donors: lactate, a fermentable organic; acetate, a non-fermentable organic; methanol, a fermentable 1-C (carbon) organic; and hydrogen gas (H2), the direct electron donor for reductive dechlorination by Dehalococcoides. The fermentable electron donors had faster dechlorination rates, more complete dechlorination, and higher bacterial abundances than the non-fermentable electron donors during short-term tests. Phylotypes of Dehalococcoides were relatively abundant (≥9%) for the cultures fed with fermentable electron donors but accounted for only ~1-2% of the reads for the cultures fed by the non-fermentable electron donors. Routing electrons to methanogenesis and a low ratio of Dehalococcoides/methanogenesis (Dhc/mcrA) were associated with slow and incomplete reductive dechlorination with methanol and H2. When fermentable substrates were applied as electron donors, a Dhc/mcrA ratio ≥6.4 was essential to achieve fast and complete dechlorination of TCE to ethene. When methanogenesis was suppressed using 2-bromoethanesulfonate (BES), achieving complete dechlorination of TCE to ethane required a minimum abundance of the mcrA gene. Methanobacterium appeared to be important for maintaining a high dechlorination rate, probably by providing Dehalococcoides with cofactors other than vitamin B12. Furthermore, the presence of homoacetogens also was important to maintain a high dechlorination rate, because they provided acetate as Dehalococcoides's obligatory carbon source and possibly cofactors.
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Affiliation(s)
- Li-Lian Wen
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Yin Zhang
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Ya-Wei Pan
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Wen-Qi Wu
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Shao-Hua Meng
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - Chen Zhou
- Department of Civil and Environmental Engineering, FAMU-FSU College of Engineering, Florida State University, Tallahassee, FL, 32310-6046, USA
| | - Youneng Tang
- Department of Civil and Environmental Engineering, FAMU-FSU College of Engineering, Florida State University, Tallahassee, FL, 32310-6046, USA
| | - Ping Zheng
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China
| | - He-Ping Zhao
- MOE Key Lab of Environmental Remediation and Ecosystem Health, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, China.
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25
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Mirza BS, Sorensen DL, Dupont RR, McLean JE. Dehalococcoides abundance and alternate electron acceptor effects on large, flow-through trichloroethene dechlorinating columns. Appl Microbiol Biotechnol 2015; 100:2367-79. [PMID: 26536878 DOI: 10.1007/s00253-015-7112-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2015] [Revised: 10/18/2015] [Accepted: 10/20/2015] [Indexed: 11/25/2022]
Abstract
Trichloroethene (TCE) in groundwater is a major health concern and biostimulation/bioaugmentation-based strategies have been evaluated to achieve complete reductive dechlorination with varying success. Different carbon sources were hypothesized to stimulate different extents of TCE reductive dechlorination. Ecological conditions that developed different dechlorination stages were investigated by quantitating Dehalococcoides 16S rRNA (Dhc) and reductive dehalogenase gene abundance, and by describing biogeochemical properties of laboratory columns in response to this biostimulation. Eight large columns (183 cm × 15.2 cm), packed with aquifer material from Hill AFB, Utah, that were continuously fed TCE for 7.5 years. Duplicate columns were biostimulated with whey or one of two different Newman Zone® emulsified oil formulations containing either nonionic surfactant (EOLN) or standard surfactant (EOL). Two columns were non-stimulated controls. Complete (whey amended), partial (EOLN amended), limited (EOL), and non-TCE dehalogenating systems (controls) developed over the course of the study. Bioaugmentation of half of the columns with Bachman Road culture 3 years prior to dismantling did not influence the extent of TCE dehalogenation. Multivariate analysis clustered samples by biostimulation treatments and extent of TCE dehalogenation. Dhc, tceA, and bvcA gene concentrations did not show a consistent relationship with TCE dehalogenation but the vcrA gene was more abundant in completely dehalogenating, whey-treated columns. The whey columns developed strongly reducing conditions producing Fe(II), sulfide, and methane. Biostimulation with different carbon and energy sources can support high concentrations of diverse Dhc, but carbon addition has a major influence on biogeochemical processes effecting the extent of TCE dehalogenation.
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Affiliation(s)
- Babur S Mirza
- Utah Water Research Laboratory, Utah State University, Logan, UT, 84322-8200, USA
| | - Darwin L Sorensen
- Utah Water Research Laboratory, Utah State University, Logan, UT, 84322-8200, USA
| | - R Ryan Dupont
- Utah Water Research Laboratory, Utah State University, Logan, UT, 84322-8200, USA.,Department of Civil and Environmental Engineering, Utah State University, Logan, UT, 84322-8200, USA
| | - Joan E McLean
- Utah Water Research Laboratory, Utah State University, Logan, UT, 84322-8200, USA. .,Department of Civil and Environmental Engineering, Utah State University, Logan, UT, 84322-8200, USA.
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Mao X, Stenuit B, Polasko A, Alvarez-Cohen L. Efficient metabolic exchange and electron transfer within a syntrophic trichloroethene-degrading coculture of Dehalococcoides mccartyi 195 and Syntrophomonas wolfei. Appl Environ Microbiol 2015; 81:2015-24. [PMID: 25576615 PMCID: PMC4345365 DOI: 10.1128/aem.03464-14] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2014] [Accepted: 01/02/2015] [Indexed: 01/07/2023] Open
Abstract
Dehalococcoides mccartyi 195 (strain 195) and Syntrophomonas wolfei were grown in a sustainable syntrophic coculture using butyrate as an electron donor and carbon source and trichloroethene (TCE) as an electron acceptor. The maximum dechlorination rate (9.9 ± 0.1 μmol day(-1)) and cell yield [(1.1 ± 0.3) × 10(8) cells μmol(-1) Cl(-)] of strain 195 maintained in coculture were, respectively, 2.6 and 1.6 times higher than those measured in the pure culture. The strain 195 cell concentration was about 16 times higher than that of S. wolfei in the coculture. Aqueous H2 concentrations ranged from 24 to 180 nM during dechlorination and increased to 350 ± 20 nM when TCE was depleted, resulting in cessation of butyrate fermentation by S. wolfei with a theoretical Gibbs free energy of -13.7 ± 0.2 kJ mol(-1). Carbon monoxide in the coculture was around 0.06 μmol per bottle, which was lower than that observed for strain 195 in isolation. The minimum H2 threshold value for TCE dechlorination by strain 195 in the coculture was 0.6 ± 0.1 nM. Cell aggregates during syntrophic growth were observed by scanning electron microscopy. The interspecies distances to achieve H2 fluxes required to support the measured dechlorination rates were predicted using Fick's law and demonstrated the need for aggregation. Filamentous appendages and extracellular polymeric substance (EPS)-like structures were present in the intercellular spaces. The transcriptome of strain 195 during exponential growth in the coculture indicated increased ATP-binding cassette transporter activities compared to the pure culture, while the membrane-bound energy metabolism related genes were expressed at stable levels.
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Affiliation(s)
- Xinwei Mao
- Department of Civil and Environmental Engineering, College of Engineering, University of California, Berkeley, Berkeley, California, USA
| | - Benoit Stenuit
- Department of Civil and Environmental Engineering, College of Engineering, University of California, Berkeley, Berkeley, California, USA
| | - Alexandra Polasko
- Department of Civil and Environmental Engineering, College of Engineering, University of California, Berkeley, Berkeley, California, USA
| | - Lisa Alvarez-Cohen
- Department of Civil and Environmental Engineering, College of Engineering, University of California, Berkeley, Berkeley, California, USA Earth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA
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27
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Pycke BG, Roll IB, Brownawell BJ, Kinney CA, Furlong ET, Kolpin DW, Halden RU. Transformation products and human metabolites of triclocarban and triclosan in sewage sludge across the United States. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2014; 48:7881-90. [PMID: 24932693 PMCID: PMC4215897 DOI: 10.1021/es5006362] [Citation(s) in RCA: 64] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Removal of triclocarban (TCC) and triclosan (TCS) from wastewater is a function of adsorption, abiotic degradation, and microbial mineralization or transformation, reactions that are not currently controlled or optimized in the pollution control infrastructure of standard wastewater treatment. Here, we report on the levels of eight transformation products, human metabolites, and manufacturing byproducts of TCC and TCS in raw and treated sewage sludge. Two sample sets were studied: samples collected once from 14 wastewater treatment plants (WWTPs) representing nine states, and multiple samples collected from one WWTP monitored for 12 months. Time-course analysis of significant mass fluxes (α=0.01) indicate that transformation of TCC (dechlorination) and TCS (methylation) occurred during sewage conveyance and treatment. Strong linear correlations were found between TCC and the human metabolite 2'-hydroxy-TCC (r=0.84), and between the TCC-dechlorination products dichlorocarbanilide (DCC) and monochlorocarbanilide (r=0.99). Mass ratios of DCC-to-TCC and of methyl-triclosan (MeTCS)-to-TCS, serving as indicators of transformation activity, revealed that transformation was widespread under different treatment regimes across the WWTPs sampled, though the degree of transformation varied significantly among study sites (α=0.01). The analysis of sludge sampled before and after different unit operation steps (i.e., anaerobic digestion, sludge heat treatment, and sludge drying) yielded insights into the extent and location of TCC and TCS transformation. Results showed anaerobic digestion to be important for MeTCS transformation (37-74%), whereas its contribution to partial TCC dechlorination was limited (0.4-2.1%). This longitudinal and nationwide survey is the first to report the occurrence of transformation products, human metabolites, and manufacturing byproducts of TCC and TCS in sewage sludge.
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Affiliation(s)
- Benny
F. G. Pycke
- Center
for Environmental Security, Biodesign Institute, Security and Defense
Systems Initiative, Arizona State University, 781 East Terrace Road, Tempe, Arizona 85287, United States
| | - Isaac B. Roll
- Center
for Environmental Security, Biodesign Institute, Security and Defense
Systems Initiative, Arizona State University, 781 East Terrace Road, Tempe, Arizona 85287, United States
| | - Bruce J. Brownawell
- School
of Marine and Atmospheric Sciences, Stony
Brook University, Stony Brook, New York 11794-5000, United States
| | - Chad A. Kinney
- Chemistry
Department, Colorado State University-Pueblo, 2200 Bonforte Boulevard, Pueblo, Colorado 81001, United States
| | - Edward T. Furlong
- U.S. Geological
Survey, Denver Federal Center, P.O. Box 25585, Denver, Colorado 80225, United States
| | - Dana W. Kolpin
- U.S. Geological
Survey, 400 South Clinton Street, Iowa City, Iowa 52244, United States
| | - Rolf U. Halden
- Center
for Environmental Security, Biodesign Institute, Security and Defense
Systems Initiative, Arizona State University, 781 East Terrace Road, Tempe, Arizona 85287, United States
- Phone: (480) 727-0893; e-mail:
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28
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Selective enrichment yields robust ethene-producing dechlorinating cultures from microcosms stalled at cis-dichloroethene. PLoS One 2014; 9:e100654. [PMID: 24950250 PMCID: PMC4065118 DOI: 10.1371/journal.pone.0100654] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2014] [Accepted: 05/27/2014] [Indexed: 11/19/2022] Open
Abstract
Dehalococcoides mccartyi strains are of particular importance for bioremediation due to their unique capability of transforming perchloroethene (PCE) and trichloroethene (TCE) to non-toxic ethene, through the intermediates cis-dichloroethene (cis-DCE) and vinyl chloride (VC). Despite the widespread environmental distribution of Dehalococcoides, biostimulation sometimes fails to promote dechlorination beyond cis-DCE. In our study, microcosms established with garden soil and mangrove sediment also stalled at cis-DCE, albeit Dehalococcoides mccartyi containing the reductive dehalogenase genes tceA, vcrA and bvcA were detected in the soil/sediment inocula. Reductive dechlorination was not promoted beyond cis-DCE, even after multiple biostimulation events with fermentable substrates and a lengthy incubation. However, transfers from microcosms stalled at cis-DCE yielded dechlorination to ethene with subsequent enrichment cultures containing up to 109Dehalococcoides mccartyi cells mL−1. Proteobacterial classes which dominated the soil/sediment communities became undetectable in the enrichments, and methanogenic activity drastically decreased after the transfers. We hypothesized that biostimulation of Dehalococcoides in the cis-DCE-stalled microcosms was impeded by other microbes present at higher abundances than Dehalococcoides and utilizing terminal electron acceptors from the soil/sediment, hence, outcompeting Dehalococcoides for H2. In support of this hypothesis, we show that garden soil and mangrove sediment microcosms bioaugmented with their respective cultures containing Dehalococcoides in high abundance were able to compete for H2 for reductive dechlorination from one biostimulation event and produced ethene with no obvious stall. Overall, our results provide an alternate explanation to consolidate conflicting observations on the ubiquity of Dehalococcoides mccartyi and occasional stalling of dechlorination at cis-DCE; thus, bringing a new perspective to better assess biological potential of different environments and to understand microbial interactions governing bioremediation.
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Delgado AG, Fajardo-Williams D, Popat SC, Torres CI, Krajmalnik-Brown R. Successful operation of continuous reactors at short retention times results in high-density, fast-rate Dehalococcoides dechlorinating cultures. Appl Microbiol Biotechnol 2013; 98:2729-37. [PMID: 24085396 DOI: 10.1007/s00253-013-5263-5] [Citation(s) in RCA: 20] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2013] [Revised: 09/11/2013] [Accepted: 09/12/2013] [Indexed: 10/26/2022]
Abstract
The discovery of Dehalococcoides mccartyi reducing perchloroethene and trichloroethene (TCE) to ethene was a key landmark for bioremediation applications at contaminated sites. D. mccartyi-containing cultures are typically grown in batch-fed reactors. On the other hand, continuous cultivation of these microorganisms has been described only at long hydraulic retention times (HRTs). We report the cultivation of a representative D. mccartyi-containing culture in continuous stirred-tank reactors (CSTRs) at a short, 3-d HRT, using TCE as the electron acceptor. We successfully operated 3-d HRT CSTRs for up to 120 days and observed sustained dechlorination of TCE at influent concentrations of 1 and 2 mM TCE to ≥ 97 % ethene, coupled to the production of 10(12) D. mccartyi cells Lculture (-1). These outcomes were possible in part by using a medium with low bicarbonate concentrations (5 mM) to minimize the excessive proliferation of microorganisms that use bicarbonate as an electron acceptor and compete with D. mccartyi for H2. The maximum conversion rates for the CSTR-produced culture were 0.13 ± 0.016, 0.06 ± 0.018, and 0.02 ± 0.007 mmol Cl(-) Lculture (-1) h(-1), respectively, for TCE, cis-dichloroethene, and vinyl chloride. The CSTR operation described here provides the fastest laboratory cultivation rate of high-cell density Dehalococcoides cultures reported in the literature to date. This cultivation method provides a fundamental scientific platform for potential future operations of such a system at larger scales.
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Affiliation(s)
- Anca G Delgado
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, P.O. Box 875701, Tempe, AZ, 85287-5701, USA,
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Kang DW, Park JG, Ilhan ZE, Wallstrom G, LaBaer J, Adams JB, Krajmalnik-Brown R. Reduced incidence of Prevotella and other fermenters in intestinal microflora of autistic children. PLoS One 2013; 8:e68322. [PMID: 23844187 PMCID: PMC3700858 DOI: 10.1371/journal.pone.0068322] [Citation(s) in RCA: 575] [Impact Index Per Article: 52.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2013] [Accepted: 05/29/2013] [Indexed: 02/07/2023] Open
Abstract
High proportions of autistic children suffer from gastrointestinal (GI) disorders, implying a link between autism and abnormalities in gut microbial functions. Increasing evidence from recent high-throughput sequencing analyses indicates that disturbances in composition and diversity of gut microbiome are associated with various disease conditions. However, microbiome-level studies on autism are limited and mostly focused on pathogenic bacteria. Therefore, here we aimed to define systemic changes in gut microbiome associated with autism and autism-related GI problems. We recruited 20 neurotypical and 20 autistic children accompanied by a survey of both autistic severity and GI symptoms. By pyrosequencing the V2/V3 regions in bacterial 16S rDNA from fecal DNA samples, we compared gut microbiomes of GI symptom-free neurotypical children with those of autistic children mostly presenting GI symptoms. Unexpectedly, the presence of autistic symptoms, rather than the severity of GI symptoms, was associated with less diverse gut microbiomes. Further, rigorous statistical tests with multiple testing corrections showed significantly lower abundances of the genera Prevotella, Coprococcus, and unclassified Veillonellaceae in autistic samples. These are intriguingly versatile carbohydrate-degrading and/or fermenting bacteria, suggesting a potential influence of unusual diet patterns observed in autistic children. However, multivariate analyses showed that autism-related changes in both overall diversity and individual genus abundances were correlated with the presence of autistic symptoms but not with their diet patterns. Taken together, autism and accompanying GI symptoms were characterized by distinct and less diverse gut microbial compositions with lower levels of Prevotella, Coprococcus, and unclassified Veillonellaceae.
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Affiliation(s)
- Dae-Wook Kang
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, Tempe, Arizona, United States of America
| | - Jin Gyoon Park
- Virginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, Arizona, United States of America
| | - Zehra Esra Ilhan
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, Tempe, Arizona, United States of America
| | - Garrick Wallstrom
- Virginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, Arizona, United States of America
- Department of Biomedical Informatics, Arizona State University, Scottsdale, Arizona, United States of America
| | - Joshua LaBaer
- Virginia G. Piper Center for Personalized Diagnostics, Biodesign Institute, Arizona State University, Tempe, Arizona, United States of America
| | - James B. Adams
- School for Engineering of Matter, Transport and Energy, Arizona State University, Tempe, Arizona, United States of America
| | - Rosa Krajmalnik-Brown
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, Tempe, Arizona, United States of America
- School of Sustainable Engineering and the Built Environment, Arizona State University, Tempe, Arizona, United States of America
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Yelton AP, Williams KH, Fournelle J, Wrighton KC, Handley KM, Banfield JF. Vanadate and acetate biostimulation of contaminated sediments decreases diversity, selects for specific taxa, and decreases aqueous V5+ concentration. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2013; 47:6500-9. [PMID: 23713472 DOI: 10.1021/es4006674] [Citation(s) in RCA: 52] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
Vanadium is a commercially important metal that is released into the environment by fossil fuel combustion and mining. Despite its prevalence as a contaminant, the potential for vanadium bioremediation has not been widely studied. Injection of acetate (as a carbon source) directly into an aquifer to biostimulate contaminated sediments in Colorado, United States, resulted in prolonged removal of aqueous vanadium for a period of at least two years. To further investigate this process, we simultaneously added acetate and vanadate (V(5+)) to columns that were packed with aquifer sediment and inserted into groundwater wells installed on the Colorado River floodplain. This allowed evaluation of the microbial response to amendments in columns that received an influx of natural groundwater. Our results demonstrate the removal of up to 99% of the added V(5+)(aq) and suggest microbial mediation. Most probable number measurements demonstrate up to a 50-fold increase in numbers of V(5+)-reducing cells in vanadium-amended columns compared to controls. 16S rRNA gene sequencing indicates decreased diversity and selection for specific taxa in columns that received vanadate compared to those that did not. Overall, our results demonstrate that acetate amendment can be an effective strategy for V removal, and that V bioremediation may be a viable technology.
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Affiliation(s)
- Alexis P Yelton
- Department of Environmental Science, University of California, Berkeley, California 94720, United States
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McNamara PJ, Krzmarzick MJ. Triclosan enriches forDehalococcoides-likeChloroflexiin anaerobic soil at environmentally relevant concentrations. FEMS Microbiol Lett 2013; 344:48-52. [DOI: 10.1111/1574-6968.12153] [Citation(s) in RCA: 28] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2013] [Revised: 03/25/2013] [Accepted: 04/04/2013] [Indexed: 11/27/2022] Open
Affiliation(s)
- Patrick J. McNamara
- Department of Civil, Construction and Environmental Engineering; Marquette University; Milwaukee; WI; USA
| | - Mark J. Krzmarzick
- School of Civil and Environmental Engineering; Oklahoma State University; Stillwater; OK; USA
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Ziv-El M, Kalinowski T, Krajmalnik-Brown R, Halden RU. Simultaneous determination of chlorinated ethenes and ethene in groundwater using headspace solid-phase microextraction with gas chromatography. J Chromatogr Sci 2013; 52:137-42. [PMID: 23377651 DOI: 10.1093/chromsci/bms258] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Abstract
Widespread contamination of groundwater by chlorinated ethenes and their biological dechlorination products necessitates the reliable monitoring of liquid matrices; current methods approved by the U.S. Environmental Protection Agency (EPA) require a minimum of 5 mL of sample volume and cannot simultaneously detect all transformative products. This paper reports on the simultaneous detection of six chlorinated ethenes and ethene itself, using a liquid sample volume of 1 mL by concentrating the compounds onto an 85-µm carboxen-polydimenthylsiloxane solid-phase microextraction fiber in 5 min and subsequent chromatographic analysis in 9.15 min. Linear increases in signal response were obtained over three orders of magnitude (∼0.05 to ∼50 µM) for simultaneous analysis with coefficient of determination (R(2)) values of ≥ 0.99. The detection limits of the method (1.3-6 µg/L) were at or below the maximum contaminant levels specified by the EPA. Matrix spike studies with groundwater and mineral medium showed recovery rates between 79-108%. The utility of the method was demonstrated in lab-scale sediment flow-through columns assessing the bioremediation potential of chlorinated ethene-contaminated groundwater. Owing to its low sample volume requirements, good sensitivity and broad target analyte range, the method is suitable for routine compliance monitoring and is particularly attractive for interpreting the bench-scale feasibility studies that are commonly performed during the remedial design stage of groundwater cleanup projects.
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Affiliation(s)
- Michal Ziv-El
- 1Swette Center for Environmental Biotechnology, Biodesign Institute at Arizona State University, P.O. Box 875701, Tempe, AZ 85287-5701
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Ontiveros-Valencia A, Ziv-El M, Zhao HP, Feng L, Rittmann BE, Krajmalnik-Brown R. Interactions between nitrate-reducing and sulfate-reducing bacteria coexisting in a hydrogen-fed biofilm. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2012; 46:11289-11298. [PMID: 23039896 DOI: 10.1021/es302370t] [Citation(s) in RCA: 59] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
To explore the relationships between denitrifying bacteria (DB) and sulfate-reducing bacteria (SRB) in H(2)-fed biofilms, we used two H(2)-based membrane biofilm reactors (MBfRs) with or without restrictions on H(2) availability. DB and SRB compete for H(2) and space in the biofilm, and sulfate (SO(4)(2-)) reduction should be out-competed when H(2) is limiting inside the biofilm. With H(2) availability restricted, nitrate (NO(3)(-)) reduction was proportional to the H(2) pressure and was complete at a H(2) pressure of 3 atm; SO(4)(2-) reduction began at H(2) ≥ 3.4 atm. Without restriction on H(2) availability, NO(3)(-) was the preferred electron acceptor, and SO(4)(2-) was reduced only when the NO(3)(-) surface loading was ≤ 0.13 g N/m(2)-day. We assayed DB and SRB by quantitative polymerase chain reaction targeting the nitrite reductases and dissimilatory sulfite reductase, respectively. Whereas DB and SRB increased with higher H(2) pressures when H(2) availability was limiting, SRB did not decline with higher NO(3)(-) removal flux when H(2) availability was not limiting, even when SO(4)(2-) reduction was absent. The SRB trend reflects that the SRB's metabolic diversity allowed them to remain in the biofilm whether or not they were reducing SO(4)(2-). In all scenarios tested, the SRB were able to initiate strong SO(4)(2-) reduction only when competition for H(2) inside the biofilm was relieved by nearly complete removal of NO(3)(-).
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Affiliation(s)
- Aura Ontiveros-Valencia
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, 1001 South McAllister Ave. Tempe, AZ, USA
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Delgado AG, Parameswaran P, Fajardo-Williams D, Halden RU, Krajmalnik-Brown R. Role of bicarbonate as a pH buffer and electron sink in microbial dechlorination of chloroethenes. Microb Cell Fact 2012; 11:128. [PMID: 22974059 PMCID: PMC3511292 DOI: 10.1186/1475-2859-11-128] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2012] [Accepted: 09/04/2012] [Indexed: 11/15/2022] Open
Abstract
BACKGROUND Buffering to achieve pH control is crucial for successful trichloroethene (TCE) anaerobic bioremediation. Bicarbonate (HCO3-) is the natural buffer in groundwater and the buffer of choice in the laboratory and at contaminated sites undergoing biological treatment with organohalide respiring microorganisms. However, HCO3- also serves as the electron acceptor for hydrogenotrophic methanogens and hydrogenotrophic homoacetogens, two microbial groups competing with organohalide respirers for hydrogen (H2). We studied the effect of HCO3- as a buffering agent and the effect of HCO3--consuming reactions in a range of concentrations (2.5-30 mM) with an initial pH of 7.5 in H2-fed TCE reductively dechlorinating communities containing Dehalococcoides, hydrogenotrophic methanogens, and hydrogenotrophic homoacetogens. RESULTS Rate differences in TCE dechlorination were observed as a result of added varying HCO3- concentrations due to H2-fed electrons channeled towards methanogenesis and homoacetogenesis and pH increases (up to 8.7) from biological HCO3- consumption. Significantly faster dechlorination rates were noted at all HCO3- concentrations tested when the pH buffering was improved by providing 4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid (HEPES) as an additional buffer. Electron balances and quantitative PCR revealed that methanogenesis was the main electron sink when the initial HCO3- concentrations were 2.5 and 5 mM, while homoacetogenesis was the dominant process and sink when 10 and 30 mM HCO3- were provided initially. CONCLUSIONS Our study reveals that HCO3- is an important variable for bioremediation of chloroethenes as it has a prominent role as an electron acceptor for methanogenesis and homoacetogenesis. It also illustrates the changes in rates and extent of reductive dechlorination resulting from the combined effect of electron donor competition stimulated by HCO3- and the changes in pH exerted by methanogens and homoacetogens.
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Affiliation(s)
- Anca G Delgado
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, PO Box 875001, Tempe, AZ 85287-5701, USA
- School of Life Sciences, Arizona State University, Tempe, USA
| | - Prathap Parameswaran
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, PO Box 875001, Tempe, AZ 85287-5701, USA
| | - Devyn Fajardo-Williams
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, PO Box 875001, Tempe, AZ 85287-5701, USA
| | - Rolf U Halden
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, PO Box 875001, Tempe, AZ 85287-5701, USA
- Ira A Fulton Schools of Engineering, Arizona State University, Tempe, USA
| | - Rosa Krajmalnik-Brown
- Swette Center for Environmental Biotechnology, Biodesign Institute, Arizona State University, PO Box 875001, Tempe, AZ 85287-5701, USA
- Ira A Fulton Schools of Engineering, Arizona State University, Tempe, USA
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Venkatesan AK, Pycke BF, Barber LB, Lee KE, Halden RU. Occurrence of triclosan, triclocarban, and its lesser chlorinated congeners in Minnesota freshwater sediments collected near wastewater treatment plants. JOURNAL OF HAZARDOUS MATERIALS 2012; 229-230:29-35. [PMID: 22742731 PMCID: PMC3401314 DOI: 10.1016/j.jhazmat.2012.05.049] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/21/2011] [Revised: 04/26/2012] [Accepted: 05/12/2012] [Indexed: 05/18/2023]
Abstract
The antimicrobial agents triclosan (TCS), triclocarban (TCC) and their associated transformation products are of increasing concern as environmental pollutants due to their potential adverse effects on humans and wildlife, including bioaccumulation and endocrine-disrupting activity. Analysis by tandem mass spectrometry of 24 paired freshwater bed sediment samples (top 10 cm) collected by the U.S. Geological Survey near 12 wastewater treatment plants (WWTPs) in Minnesota revealed TCS and TCC concentrations of up to 85 and 822 ng/g dry weight (dw), respectively. Concentrations of TCS and TCC in bed sediments collected downstream of WWTPs were significantly greater than upstream concentrations in 58% and 42% of the sites, respectively. Dichloro- and non-chlorinated carbanilides (DCC and NCC) were detected in sediments collected at all sites at concentrations of up to 160 and 1.1 ng/g dw, respectively. Overall, antimicrobial concentrations were significantly higher in lakes than in rivers and creeks, with relative abundances decreasing from TCC>TCS>DCC>NCC. This is the first statewide report on the occurrence of TCS, TCC and TCC transformation products in freshwater sediments. Moreover, the results suggest biological or chemical TCC dechlorination products to be ubiquitous in freshwater environments of Minnesota, but whether this transformation occurs in the WWTP or bed sediment remains to be determined.
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Affiliation(s)
- Arjun K. Venkatesan
- Swette Center for Environmental Biotechnology, The Biodesign Institute at Arizona State University, Tempe, Arizona 85287, USA
| | - Benny F.G. Pycke
- Swette Center for Environmental Biotechnology, The Biodesign Institute at Arizona State University, Tempe, Arizona 85287, USA
| | - Larry B. Barber
- U.S. Geological Survey, 3215 Marine Street, Boulder, CO 80303, USA
| | - Kathy E. Lee
- U.S. Geological Survey, Mounds View, MN 55112, USA
| | - Rolf U. Halden
- Swette Center for Environmental Biotechnology, The Biodesign Institute at Arizona State University, Tempe, Arizona 85287, USA
- Corresponding author phone: +1 (480) 727-0893; fax: +1 (480) 727-0889;
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Kaufhold T, Schmidt M, Cichocka D, Nikolausz M, Nijenhuis I. Dehalogenation of diverse halogenated substrates by a highly enrichedDehalococcoides-containing culture derived from the contaminated mega-site in Bitterfeld. FEMS Microbiol Ecol 2012; 83:176-88. [DOI: 10.1111/j.1574-6941.2012.01462.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2012] [Revised: 07/16/2012] [Accepted: 07/25/2012] [Indexed: 11/30/2022] Open
Affiliation(s)
- Theresa Kaufhold
- Department of Isotope Biogeochemistry; Helmholtz Centre for Environmental Research - UFZ; Leipzig; Germany
| | - Marie Schmidt
- Department of Isotope Biogeochemistry; Helmholtz Centre for Environmental Research - UFZ; Leipzig; Germany
| | - Danuta Cichocka
- Faculty of Bioscience Engineering; Division of Soil and Water Management; Catholic University of Leuven; Heverlee; Belgium
| | | | - Ivonne Nijenhuis
- Department of Isotope Biogeochemistry; Helmholtz Centre for Environmental Research - UFZ; Leipzig; Germany
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Ziv-El M, Popat SC, Parameswaran P, Kang DW, Polasko A, Halden RU, Rittmann BE, Krajmalnik-Brown R. Using electron balances and molecular techniques to assess trichoroethene-induced shifts to a dechlorinating microbial community. Biotechnol Bioeng 2012; 109:2230-9. [DOI: 10.1002/bit.24504] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2011] [Revised: 03/13/2012] [Accepted: 03/16/2012] [Indexed: 11/09/2022]
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Ziv-El M, Popat SC, Cai K, Halden RU, Krajmalnik-Brown R, Rittmann BE. Managing methanogens and homoacetogens to promote reductive dechlorination of trichloroethene with direct delivery of H2 in a membrane biofilm reactor. Biotechnol Bioeng 2012; 109:2200-10. [DOI: 10.1002/bit.24487] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2011] [Revised: 02/13/2012] [Accepted: 02/22/2012] [Indexed: 11/12/2022]
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