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Rabbachin L, Nir I, Waldherr M, Vassallo Y, Piñar G, Graf A, Kushmaro A, Sterflinger K. Diversity of fungi associated with petroglyph sites in the Negev Desert, Israel, and their potential role in bioweathering. FRONTIERS IN FUNGAL BIOLOGY 2024; 5:1400380. [PMID: 39035870 PMCID: PMC11257853 DOI: 10.3389/ffunb.2024.1400380] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/13/2024] [Accepted: 05/14/2024] [Indexed: 07/23/2024]
Abstract
The petroglyphs of the Negev Desert, Israel, are famous and valuable archaeological remains. Previous studies have investigated the microbial communities associated with petroglyphs and their potential role in stone deterioration; nevertheless, the role of fungi remains unclear. In this study, the fungal communities present on the stone and, as a comparison, in the surrounding environment (soil and air) at Negev petroglyph sites were analyzed by means of culture-dependent and -independent (metagenomic) techniques. The metagenomic results showed a high fungal biodiversity in the soil, and both approaches highlighted the prevalence of species producing melanized, large, thick-walled spores (mainly Alternaria spp.). From the air sampling, mostly Cladosporium spp. were retrieved. On the other hand, on the rock, the results seem to indicate a low presence of fungi, but with a rock-specialized mycobiota consisting of extremotolerant microcolonial fungi (MCF) (e.g., Vermiconidia and Coniosporium) and lichens (Flavoplaca). In addition, low proportions of cosmopolitan fungi were detected on the stone, but the comparison of the data clearly indicates that they are transients from the surrounding environment. The ability of the isolated strains to dissolve CaCO3 and therefore be a potential threat to the petroglyphs (limestone substrate) was tested, but only one strain resulted in positive acid production under laboratory conditions. Nevertheless, both lichens and MCF detected in this study are well-known stone deteriogens, which may have a significant impact on the petroglyph's deterioration.
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Affiliation(s)
- Laura Rabbachin
- Institute of Natural Sciences and Technology in the Arts (INTK), Academy of Fine Arts Vienna, Vienna, Austria
| | - Irit Nir
- Environmental Biotechnology Laboratory, Avram and Stella Goldstein-Goren Department of Biotechnology Engineering, Ben-Gurion University of the Negev, Be’er Sheva, Israel
| | - Monika Waldherr
- Department of Bioinformatics, University of Applied Sciences, Vienna, Austria
| | - Ylenia Vassallo
- Laboratory of Plant Pathology, Department of Environmental Biology, Sapienza University of Rome, Rome, Italy
| | - Guadalupe Piñar
- Institute of Natural Sciences and Technology in the Arts (INTK), Academy of Fine Arts Vienna, Vienna, Austria
| | - Alexandra Graf
- Department of Bioinformatics, University of Applied Sciences, Vienna, Austria
| | - Ariel Kushmaro
- Environmental Biotechnology Laboratory, Avram and Stella Goldstein-Goren Department of Biotechnology Engineering, Ben-Gurion University of the Negev, Be’er Sheva, Israel
- School of Sustainability and Climate Change, Ben-Gurion University of the Negev, Be’er Sheva, Israel
| | - Katja Sterflinger
- Institute of Natural Sciences and Technology in the Arts (INTK), Academy of Fine Arts Vienna, Vienna, Austria
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Chen W, Fu B, Ma F, He Z, Li M. Hot spots and trends in microbial disease research on cultural heritage: a bibliometric analysis. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:35908-35926. [PMID: 38743327 DOI: 10.1007/s11356-024-33559-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 04/30/2024] [Indexed: 05/16/2024]
Abstract
This study is to understand and analyze the development history, research hotspots, and research trends in the study of microbial diseases of cultural heritage through bibliometric analyses in order to fill the current gap of no literature review in this research field and to make certain contributions to the research in this field and the protection of cultural heritage. Bibliometric and visual analyses of the literature on cultural heritage microbial diseases in the Web of Science (WoS) core collection were carried out using VOSviewer and R-bibliometrix, choosing the two main literature types of papers and reviews. The emphasis was placed on analyzing and summarizing core research strengths, hotspots, and trends. Six hundred sixty-seven documents (573 articles and 94 reviews) were retrieved. αIn the WoS core collection, the first literature on cultural heritage microbial disease research was published in January 2000, and the annual number of publications from 2000 to 2009 did not exceed one; the annual number of publications from 2010 onwards increased rapidly, and after 2018, the number of publications per year exceeded 60, reaching 94 in 2020, which indicates that cultural heritage microbial disease research is booming. Our research showed that Italy, the USA, and China were the leading research countries, and Univ Milan was the institution with the most publications. International Biodeterioration &Biodegradation was the most published and co-cited journal, and Gu JD was the most prolific author. The research hotspots in the study of microbial diseases of cultural heritage mainly include biological degradation of cultural heritage; identification of diseased microorganisms and disease mechanisms; cultural heritage microbial disease prevention and control methods; monitoring, prevention, and control of diseased microorganisms in indoor air; antibacterial agents, especially essential oils, nanoparticles, and other safe and efficient antibacterial products research and development; and exploration of the mechanisms of biofilm protection of cultural heritage on cultural heritage surfaces. Monitoring and identifying cultural heritage microbial communities, identifying disease mechanisms, and researching safe and efficient bacteriostatic products such as essential oils and nanoparticles will be the main research directions in the field of cultural heritage microbial disease prevention and control in the future.
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Affiliation(s)
- Weilin Chen
- School of Environment, Liaoning University, Shenyang, 110036, China
| | - Baorong Fu
- School of Environment, Liaoning University, Shenyang, 110036, China.
| | - Fang Ma
- School of Environment, Liaoning University, Shenyang, 110036, China
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin, 150090, China
| | - Zhe He
- School of Environment, Liaoning University, Shenyang, 110036, China
| | - Ming Li
- School of Environment, Liaoning University, Shenyang, 110036, China
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Gadd GM, Fomina M, Pinzari F. Fungal biodeterioration and preservation of cultural heritage, artwork, and historical artifacts: extremophily and adaptation. Microbiol Mol Biol Rev 2024; 88:e0020022. [PMID: 38179930 PMCID: PMC10966957 DOI: 10.1128/mmbr.00200-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Accepted: 09/11/2023] [Indexed: 01/06/2024] Open
Abstract
SUMMARYFungi are ubiquitous and important biosphere inhabitants, and their abilities to decompose, degrade, and otherwise transform a massive range of organic and inorganic substances, including plant organic matter, rocks, and minerals, underpin their major significance as biodeteriogens in the built environment and of cultural heritage. Fungi are often the most obvious agents of cultural heritage biodeterioration with effects ranging from discoloration, staining, and biofouling to destruction of building components, historical artifacts, and artwork. Sporulation, morphological adaptations, and the explorative penetrative lifestyle of filamentous fungi enable efficient dispersal and colonization of solid substrates, while many species are able to withstand environmental stress factors such as desiccation, ultra-violet radiation, salinity, and potentially toxic organic and inorganic substances. Many can grow under nutrient-limited conditions, and many produce resistant cell forms that can survive through long periods of adverse conditions. The fungal lifestyle and chemoorganotrophic metabolism therefore enable adaptation and success in the frequently encountered extremophilic conditions that are associated with indoor and outdoor cultural heritage. Apart from free-living fungi, lichens are a fungal growth form and ubiquitous pioneer colonizers and biodeteriogens of outdoor materials, especially stone- and mineral-based building components. This article surveys the roles and significance of fungi in the biodeterioration of cultural heritage, with reference to the mechanisms involved and in relation to the range of substances encountered, as well as the methods by which fungal biodeterioration can be assessed and combated, and how certain fungal processes may be utilized in bioprotection.
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Affiliation(s)
- Geoffrey Michael Gadd
- Geomicrobiology Group, School of Life Sciences, University of Dundee, Dundee, United Kingdom
- State Key Laboratory of Heavy Oil Processing, Beijing Key Laboratory of Oil and Gas Pollution Control, College of Chemical Engineering and Environment, China University of Petroleum, Beijing, China
| | - Marina Fomina
- Zabolotny Institute of Microbiology and Virology, National Academy of Sciences of Ukraine, Kyiv, Ukraine
- National Reserve “Sophia of Kyiv”, Kyiv, Ukraine
| | - Flavia Pinzari
- Institute for Biological Systems (ISB), Council of National Research of Italy (CNR), Monterotondo (RM), Italy
- Natural History Museum, London, United Kingdom
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Sanjurjo-Sánchez J, Alves C, Freire-Lista DM. Biomineral deposits and coatings on stone monuments as biodeterioration fingerprints. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:168846. [PMID: 38036142 DOI: 10.1016/j.scitotenv.2023.168846] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Revised: 11/16/2023] [Accepted: 11/22/2023] [Indexed: 12/02/2023]
Abstract
Biominerals deposition processes, also called biomineralisation, are intimately related to biodeterioration on stone surfaces. They include complex processes not always completely well understood. The study of biominerals implies the identification of organisms, their molecular mechanisms, and organism/rock/atmosphere interactions. Sampling restrictions of monument stones difficult the biominerals study and the in situ demonstrating of biodeterioration processes. Multidisciplinary works are required to understand the whole process. Thus, studies in heritage buildings have taken advantage of previous knowledge acquired thanks to laboratory experiments, investigations carried out on rock outcrops and within caves from some years ago. With the extrapolation of such knowledge to heritage buildings and the advances in laboratory techniques, there has been a huge increase of knowledge regarding biomineralisation and biodeterioration processes in stone monuments during the last 20 years. These advances have opened new debates about the implications on conservation interventions, and the organism's role in stone conservation and decay. This is a review of the existing studies of biominerals formation, biodeterioration on laboratory experiments, rocks, caves, and their application to building stones of monuments.
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Affiliation(s)
| | - Carlos Alves
- LandS/Lab2PT-Landscapes, Heritage and Territory Laboratory (FCT-UIDB/04509/2020) and Earth Sciences Department/School of Sciences, University of Minho, 4710-057 Braga, Portugal
| | - David M Freire-Lista
- Universidade de Trás-os-Montes e Alto Douro, UTAD, Escola de Ciências da Vida e do Ambiente, Quinta dos Prados, 5000-801 Vila Real, Portugal; Centro de Geociências, Universidade de Coimbra, Portugal
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Toreno G, Zucconi L, Caneva G, Meloni P, Isola D. Recolonization dynamics of marble monuments after cleaning treatments: A nine-year follow-up study. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:169350. [PMID: 38103606 DOI: 10.1016/j.scitotenv.2023.169350] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2023] [Revised: 11/07/2023] [Accepted: 12/11/2023] [Indexed: 12/19/2023]
Abstract
The prevention and control of biological patinas on outdoor stone monuments represent a demanding challenge for the conservation of cultural heritage also due to some microorganisms, particularly resistant to treatments, such as black meristematic fungi, an eco-physiological group well known for its tolerance to extreme conditions. Even if several methods and eco-friendly products have been proposed as new alternatives, traditional biocides are still far from being completely replaced. Recolonization is a natural process that occurs sooner or later after cleaning. The time that elapses until its occurrence can vary considerably depending on environmental conditions and the used products; unfortunately, the papers describing the effect of treatments over time are rare. This work aims to shed light on the recolonization process of marble surfaces in the ancient monumental cemetery of Bonaria (Cagliari) after nine years from treatments, evaluating the long-term efficiency of two different cleaning methods, namely dimethyl sulfoxide-based gel (DMSO-based gel) and Biotin T (a didecyldimethylammonium chloride-based product-). In this context, the microflora present before treatments and in the following years was assessed by culture-based methods and identified by molecular techniques, with attention on black meristematic fungi, which were used as reference for the most resistant lithobiontic organisms. Different environmental parameters, such as temperature, exposition, dominant winds, and rainfall, were considered, and infrared thermography, portable light microscopy, and image analysis were used. This research evidenced the influence of water availability and lightning in recolonization processes, the transition from the pioneer fungal community versus more resistant black fungal species after Biotin T treatment, and the long-lasting efficiency of the DMSO-based gel. These findings prove that this low-impact method deserves more attention in the conservation of outdoor marble monuments, emphasizing the importance of long-term studies.
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Affiliation(s)
- Georgia Toreno
- Superintendency of Archaeology, Fine Arts and Landscape for the metropolitan city of Cagliari and the Provinces of Oristano and South Sardinia, Italy.
| | - Laura Zucconi
- Department of Ecological and Biological Sciences (DEB), University of Tuscia, 01100 Viterbo, Italy.
| | - Giulia Caneva
- Department of Sciences, Roma Tre University, 00146 Rome, Italy.
| | - Paola Meloni
- Department of Mechanical, Chemical and Materials Engineering (DIMCM), University of Cagliari, 09123 Cagliari, Italy; Laboratorio Colle di Bonaria, University of Cagliari, 09125 Cagliari, Italy.
| | - Daniela Isola
- Department of Sciences, Roma Tre University, 00146 Rome, Italy; Department of Economics, Engineering, Society and Business Organization (DEIM), University of Tuscia, 01100 Viterbo, Italy.
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Mugnai G, Borruso L, Wu YL, Gallinaro M, Cappitelli F, Zerboni A, Villa F. Ecological strategies of bacterial communities in prehistoric stone wall paintings across weathering gradients: A case study from the Borana zone in southern Ethiopia. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 907:168026. [PMID: 37907101 DOI: 10.1016/j.scitotenv.2023.168026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 09/18/2023] [Accepted: 10/20/2023] [Indexed: 11/02/2023]
Abstract
Rock art paintings represent fragile ecosystems supporting complex microbial communities tuned to the lithic substrate and climatic conditions. The composition and activity of these microbial communities associated with different weathering patterns affecting rock art sites remain unexplored. This study aimed to explore how bacterial communities adapt their ecological strategies based on substrate weathering, while also examining the role of their metabolic pathways in either biodeterioration or bioprotection of the underlying stone. SEM-EDS investigations coupled with 16S rRNA gene sequencing and PICRUSt2 analysis were applied on different weathered surfaces that affect southern Ethiopian rock paintings to investigate the relationships between the current stone microbiome and weathering patterns. The findings revealed that samples experiencing low and high weathering reached a climax stage characterized by stable microenvironments and limited resources. This condition favored K-strategist microorganisms, leading to reduced α-biodiversity and a community with a positive or neutral impact on the substrate. In contrast, moderately-weathered samples displayed diverse microhabitats, resulting in the prevalence of r-strategist bacteria, increased α-biodiversity, and the presence of specialist microorganisms. Moreover, the bacterial communities in moderately-weathered samples demonstrated the highest potential for carbon fixation, stress responses, and complete nitrogen and sulfur cycles. This bacterial community also showed the potential to negatively impact the underlying substrate. This research provided valuable insights into the little-understood ecology of bacterial communities inhabiting deteriorated surfaces, shedding light on the potential role of these microorganisms in the sustainable conservation of rock art.
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Affiliation(s)
- Gianmarco Mugnai
- Department of Agriculture, Food and Environmental Sciences, University of Perugia, Borgo XX Giugno, 74, I-06121 Perugia (PG), IT, Italy.
| | - Luigimaria Borruso
- Free University of Bolzano, Faculty of Agricultural, Environmental and Food Sciences, Piazza Universitá 5, 39100 Bolzano, Italy.
| | - Ying-Li Wu
- Dipartimento di Scienze della Terra "A. Desio", Università degli Studi di Milano, 20133 Milan, Italy.
| | - Marina Gallinaro
- Dipartimento di Scienze dell'Antichità, Università di Roma La Sapienza, 00185 Rome, Italy.
| | - Francesca Cappitelli
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
| | - Andrea Zerboni
- Dipartimento di Scienze della Terra "A. Desio", Università degli Studi di Milano, 20133 Milan, Italy.
| | - Federica Villa
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
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Favero-Longo SE, Matteucci E, Voyron S, Iacomussi P, Ruggiero MG. Lithobiontic recolonization following cleaning and preservative treatments on the rock engravings of Valle Camonica, Italy: A 54-months monitoring. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 901:165885. [PMID: 37524193 DOI: 10.1016/j.scitotenv.2023.165885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/30/2023] [Revised: 07/03/2023] [Accepted: 07/27/2023] [Indexed: 08/02/2023]
Abstract
Both the indirect control of microclimate conditions and the direct application of preservative products to contrast stone bioreceptivity may contribute to limit lithobiontic recolonization of cultural heritage surfaces after cleaning interventions. However, the priority deserved by these different preventive approaches has still been poorly evaluated, particularly in outdoor environments. This work dealt with the engraved sandstone surfaces of the National Park of Rock Engravings of Naquane (Italy, UNESCO WHS), widely colonized by lichens, mosses and a dark cyanobacterial biofilm, and thus requiring frequent cleaning interventions to preserve their legibility for visitors and scholars. In particular, post-cleaning recolonization by the different lithobionts was seasonally monitored along 54 months in different zones of an engraved outcrop, primarily differing in levels of shading, on parcels exposed to nine different conservative treatments. These included (or not) a pre-cleaning devitalization of lithobionts and the post-cleaning application of biocidal (benzalkonium chloride, plant essential oils, usnic acid) and other restoration products (nanocrystalline anatase, polysiloxane-based water repellent, ethyl-silicate-based consolidant). The combination of surface image analyses, fluorimetric and colorimetric measurements showed that mosses and the cyanobacterial biofilm rapidly recolonized all the parcels in the more shaded zone, irrespective of conservative treatments. In the other areas, recolonization significantly differed depending on the treatment. The post-cleaning application of biocides determined the best results through two vegetative seasons, but only nanocrystalline anatase and the polysiloxane-based water repellent maintained the surfaces lighter than uncleaned controls along the whole monitoring period. Recolonization primarily proceeded by the uncleaned surfaces surrounding the parcels and, at least in the examined case of lichens, did not show substantial shifts in community composition, although some nitrophytic species increased their frequency. In conclusion, the effectiveness of preservative treatments to prevent a rapid recolonization of heritage stone surfaces appeared subordinate to the presence of microenvironmental conditions less favourable to lithobionts.
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Affiliation(s)
- Sergio E Favero-Longo
- Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Viale Mattioli 25, 10125 Torino, Italy.
| | - Enrica Matteucci
- Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Viale Mattioli 25, 10125 Torino, Italy; Fondazione Centro per la Conservazione e Restauro "La Venaria Reale", via XX settembre 18, 10078 Venaria Reale, TO, Italy
| | - Samuele Voyron
- Dipartimento di Scienze della Vita e Biologia dei Sistemi, Università degli Studi di Torino, Viale Mattioli 25, 10125 Torino, Italy
| | - Paola Iacomussi
- Istituto Nazionale di Ricerca Metrologica, Divisione Ottica, Strada delle Cacce 91, 10135 Torino, Italy
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Wahab A, Muhammad M, Munir A, Abdi G, Zaman W, Ayaz A, Khizar C, Reddy SPP. Role of Arbuscular Mycorrhizal Fungi in Regulating Growth, Enhancing Productivity, and Potentially Influencing Ecosystems under Abiotic and Biotic Stresses. PLANTS (BASEL, SWITZERLAND) 2023; 12:3102. [PMID: 37687353 PMCID: PMC10489935 DOI: 10.3390/plants12173102] [Citation(s) in RCA: 17] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Revised: 08/24/2023] [Accepted: 08/26/2023] [Indexed: 09/10/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) form symbiotic relationships with the roots of nearly all land-dwelling plants, increasing growth and productivity, especially during abiotic stress. AMF improves plant development by improving nutrient acquisition, such as phosphorus, water, and mineral uptake. AMF improves plant tolerance and resilience to abiotic stressors such as drought, salt, and heavy metal toxicity. These benefits come from the arbuscular mycorrhizal interface, which lets fungal and plant partners exchange nutrients, signalling molecules, and protective chemical compounds. Plants' antioxidant defence systems, osmotic adjustment, and hormone regulation are also affected by AMF infestation. These responses promote plant performance, photosynthetic efficiency, and biomass production in abiotic stress conditions. As a result of its positive effects on soil structure, nutrient cycling, and carbon sequestration, AMF contributes to the maintenance of resilient ecosystems. The effects of AMFs on plant growth and ecological stability are species- and environment-specific. AMF's growth-regulating, productivity-enhancing role in abiotic stress alleviation under abiotic stress is reviewed. More research is needed to understand the molecular mechanisms that drive AMF-plant interactions and their responses to abiotic stresses. AMF triggers plants' morphological, physiological, and molecular responses to abiotic stress. Water and nutrient acquisition, plant development, and abiotic stress tolerance are improved by arbuscular mycorrhizal symbiosis. In plants, AMF colonization modulates antioxidant defense mechanisms, osmotic adjustment, and hormonal regulation. These responses promote plant performance, photosynthetic efficiency, and biomass production in abiotic stress circumstances. AMF-mediated effects are also enhanced by essential oils (EOs), superoxide dismutase (SOD), peroxidase (POD), ascorbate peroxidase (APX), hydrogen peroxide (H2O2), malondialdehyde (MDA), and phosphorus (P). Understanding how AMF increases plant adaptation and reduces abiotic stress will help sustain agriculture, ecosystem management, and climate change mitigation. Arbuscular mycorrhizal fungi (AMF) have gained prominence in agriculture due to their multifaceted roles in promoting plant health and productivity. This review delves into how AMF influences plant growth and nutrient absorption, especially under challenging environmental conditions. We further explore the extent to which AMF bolsters plant resilience and growth during stress.
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Affiliation(s)
- Abdul Wahab
- Shanghai Center for Plant Stress Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai 200032, China
- University of Chinese Academy of Sciences, Beijing 100049, China;
| | - Murad Muhammad
- University of Chinese Academy of Sciences, Beijing 100049, China;
- State Key Laboratory of Desert and Oasis Ecology, Xinjiang Institute of Ecology and Geography, Chinese Academy of Sciences, Urumqi 830011, China
| | - Asma Munir
- Department of Chemistry, Government College Women University, Faisalabad 38000, Pakistan;
| | - Gholamreza Abdi
- Department of Biotechnology, Persian Gulf Research Institute, Persian Gulf University, Bushehr 75169, Iran;
| | - Wajid Zaman
- Department of Life Sciences, Yeungnam University, Gyeongsan 38541, Gyeongbuk, Republic of Korea
| | - Asma Ayaz
- Faculty of Sports Science, Ningbo University, Ningbo 315211, China;
| | - Chandni Khizar
- Institute of Molecular Biology and Biochemistry, University of the Lahore, Lahore 51000, Pakistan;
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Pinna D, Mazzotti V, Gualtieri S, Voyron S, Andreotti A, Favero-Longo SE. Damaging and protective interactions of lichens and biofilms on ceramic dolia and sculptures of the International Museum of Ceramics, Faenza, Italy. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 877:162607. [PMID: 36906030 DOI: 10.1016/j.scitotenv.2023.162607] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 02/24/2023] [Accepted: 02/28/2023] [Indexed: 05/06/2023]
Abstract
Although ceramic objects are an important part of the worldwide cultural heritage, few investigations on the effects of lithobiontic growth on their outdoor conservation are available in the literature. Many aspects of the interaction between lithobionts and stones are still unknown or strongly debated, as in the case of equilibria between biodeterioration and bioprotection. This paper describes research on the colonization by lithobionts on outdoor ceramic Roman dolia and contemporary sculptures of the International Museum of Ceramics, Faenza (Italy). Accordingly, the study i) characterized the mineralogical composition and petrographic structure of the artworks, ii) performed porosimetric measurements, iii) identified lichen and microbial diversity, iv) elucidated the interaction of the lithobionts with the substrates. Moreover, v) the measurements of variability in stone surface hardness and in water absorption of colonized and uncolonized areas were collected to assess damaging and/or protective effects by the lithobionts. The investigation showed how the biological colonization depends on physical properties of the substrates as well on climatic conditions of environments in which the ceramic artworks are located. The results indicated that lichens Protoparmeliopsis muralis and Lecanora campestris may have a bioprotective effect on ceramics with high total porosity and pores with very small diameters, as they poorly penetrate the substrate, do not negatively affect surface hardness and are able to reduce the amount of absorbed water limiting the water ingress. By contrast, Verrucaria nigrescens, here widely found in association with rock-dwelling fungi, deeply penetrate terracotta causing substrate disaggregation, with negative consequences on surface hardness and water absorption. Accordingly, a careful evaluation of the negative and positive effects of lichens must be carried out before deciding their removal. Regarding biofilms, their barrier efficacy is related to their thickness and composition. Even if thin, they can impact negatively on substrates enhancing the water absorption in comparison to uncolonized parts.
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Affiliation(s)
- Daniela Pinna
- Chemistry Department, University of Bologna, Ravenna Campus, via Guaccimanni 42, Ravenna, Italy.
| | - Valentina Mazzotti
- Museo Internazionale delle Ceramiche in Faenza, Viale Baccarini 19, 48018 Faenza, RA, Italy.
| | - Sabrina Gualtieri
- Institute of Science and Technology for Ceramics, National Research Council, Via Granarolo 64, 48018 Faenza, RA, Italy.
| | - Samuele Voyron
- Dipartimento di Scienze della Vita e Biologia dei Sistemi (Life Sciences and Systems Biology), viale Mattioli 25, 10125 Torino, Italy.
| | - Alessia Andreotti
- Department of Chemistry and Industrial Chemistry, University of Pisa, via Moruzzi 13, Pisa, Italy.
| | - Sergio Enrico Favero-Longo
- Dipartimento di Scienze della Vita e Biologia dei Sistemi (Life Sciences and Systems Biology), viale Mattioli 25, 10125 Torino, Italy.
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10
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Villa F, Ludwig N, Mazzini S, Scaglioni L, Fuchs AL, Tripet B, Copié V, Stewart PS, Cappitelli F. A desiccated dual-species subaerial biofilm reprograms its metabolism and affects water dynamics in limestone. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 868:161666. [PMID: 36669662 DOI: 10.1016/j.scitotenv.2023.161666] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2022] [Revised: 01/10/2023] [Accepted: 01/13/2023] [Indexed: 06/17/2023]
Abstract
Understanding the impact of sessile communities on underlying materials is of paramount importance in stone conservation. Up until now, the critical role of subaerial biofilms (SABs) whether they are protective or deteriorative remains unclear, especially under desiccation. The interest in desiccated SABs is raised by the prediction of an increase in drought events in the next decades that will affect the Mediterranean regions' rich stone heritage as never before. Thus, the main goal of this research is to study the effects of desiccation on both the biofilms' eco-physiology and its impacts on the lithic substrate. To this end, we used a dual-species model system composed of a phototroph and a chemotroph to simulate biofilm behavior on stone heritage. We found that drought altered the phototroph-chemotroph balance and enriched the biofilm matrix with proteins and DNA. Desiccated SABs underwent a shift in metabolism to fermentation and a decrease in oxidative stress. Additionally, desiccated SABs changed the water-related dynamics (adsorption, evaporation, and wetting properties) in limestone. Water absorption experiments showed that desiccated SABs protected the stone from rapid water uptake, while a thermographic survey indicated a delay in water evaporation. Spilling-drop tests revealed a change in the wettability of the stone-SAB interface, which affected the water transport properties of the stone. Finally, desiccated SABs reduced stone swelling in the presence of water vapor. The biodeteriorative and bioprotective implications of desiccated SABs on the stone were ultimately assessed.
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Affiliation(s)
- F Villa
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
| | - N Ludwig
- Dipartimento di Fisica Aldo Pontremoli, Università degli Studi di Milano, 20133 Milan, Italy.
| | - S Mazzini
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
| | - L Scaglioni
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
| | - A L Fuchs
- Department of Chemistry & Biochemistry, Montana State University, Bozeman, USA
| | - B Tripet
- Department of Chemistry & Biochemistry, Montana State University, Bozeman, USA.
| | - V Copié
- Department of Chemistry & Biochemistry, Montana State University, Bozeman, USA.
| | - P S Stewart
- Center for Biofilm Engineering, Montana State University, Bozeman 59717, USA.
| | - F Cappitelli
- Dipartimento di Scienze per gli Alimenti, la Nutrizione e l'Ambiente, Università degli Studi di Milano, 20133 Milan, Italy.
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11
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Sanmartín P, Bosch-Roig P, Pangallo D, Kraková L, Serrano M. Unraveling disparate roles of organisms, from plants to bacteria, and viruses on built cultural heritage. Appl Microbiol Biotechnol 2023; 107:2027-2037. [PMID: 36820899 PMCID: PMC9947938 DOI: 10.1007/s00253-023-12423-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Revised: 12/19/2022] [Accepted: 01/31/2023] [Indexed: 02/24/2023]
Abstract
The different organisms, ranging from plants to bacteria, and viruses that dwell on built cultural heritage can be passive or active participants in conservation processes. For the active participants, particular attention is generally given to organisms that play a positive role in bioprotection, bioprecipitation, bioconsolidation, bioremediation, biocleaning, and biological control and to those involved in providing ecosystem services, such as reducing temperature, pollution, and noise in urban areas. The organisms can also evolve or mutate in response to changes, becoming tolerant and resistant to biocidal treatments or acquiring certain capacities, such as water repellency or resistance to ultraviolet radiation. Our understanding of the capacities and roles of these active organisms is constantly evolving as bioprotection/biodeterioration, and biotreatment studies are conducted and new techniques for characterizing species are developed. This brief review article aims to shed light on interesting research that has been abandoned as well as on recent (some ongoing) studies opening up new scopes of research involving a wide variety of organisms and viruses, which are likely to receive more attention in the coming years. KEY POINTS: • Organisms and viruses can be active or passive players in heritage conservation • Biotreatment and ecosystem service studies involving organisms and viruses are shown • Green deal, health, ecosystem services, and global change may shape future research.
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Affiliation(s)
- Patricia Sanmartín
- grid.11794.3a0000000109410645GEMAP (GI-1243), Departamento de Edafoloxía e Química Agrícola, Facultade de Farmacia, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Spain
- grid.11794.3a0000000109410645CRETUS, Universidade de Santiago de Compostela, Santiago de Compostela, Spain
| | - Pilar Bosch-Roig
- grid.157927.f0000 0004 1770 5832Instituto Universitario de Restauración del Patrimonio, Dpto. Conservación y Restauración del Patrimonio, Universitat Politècnica de València, 46022 Valencia, Spain
| | - Domenico Pangallo
- grid.419303.c0000 0001 2180 9405Institute of Molecular Biology, Slovak Academy of Sciences, Dúbravská cesta 21, 845 51 Bratislava, Slovakia
- Caravella, s.r.o., Tupolevova 2, 851 01 Bratislava, Slovakia
| | - Lucia Kraková
- grid.419303.c0000 0001 2180 9405Institute of Molecular Biology, Slovak Academy of Sciences, Dúbravská cesta 21, 845 51 Bratislava, Slovakia
| | - Miguel Serrano
- grid.11794.3a0000000109410645Department of Botany, Faculty of Pharmacy, University of Santiago de Compostela, 15782 Santiago de Compostela, Spain
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12
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Geweely NS. New frontiers review of some recent conservation techniques of organic and inorganic archaeological artefacts against microbial deterioration. Front Microbiol 2023; 14:1146582. [PMID: 37007519 PMCID: PMC10060858 DOI: 10.3389/fmicb.2023.1146582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Accepted: 02/13/2023] [Indexed: 03/18/2023] Open
Abstract
The information on the advances and technology of some recent conservation methods (2020–2023) of organic and inorganic archaeological objects against microbial deterioration is recorded. An outline of comparative new protective methods for conserving plant-origin organic artefacts {Fibers (manuscripts, textile) and wood}, animal-origin organic artefacts (painting, parchment and mummies) and inorganic stone artefacts were investigated. The work not only contributes to the development of safe revolutionary ways for more efficient safe conservation of items of historical and cultural worth but also serves as a significant diagnostic signature for detecting the sorts of microbial identification and incidents in antiques. Biological technologies (environmentally friendly green biocides) are the most used recent, efficient and safe strategy acceptable as alternatives to stop microbial deterioration and prevent any potential interactions between the biological agent and the artefacts. Also, a synergistic effect of combining natural biocides with mechanical cleaning or chemical treatments was suggested. The recommended exploration techniques should be considered for future applications.
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13
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Camacho-Chab JC, Pereañez-Sacarías JE, Camacho-Chab PA, Gaylarde C, Arena-Ortiz ML, Ortiz-Alcántara JM, Chan-Bacab MJ, Quintana-Owen P, Ortega-Morales BO. Influence of bacterial biopolymers on physical properties of experimental limestone blocks. World J Microbiol Biotechnol 2022; 38:254. [DOI: 10.1007/s11274-022-03438-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Accepted: 10/07/2022] [Indexed: 11/16/2022]
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14
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Villa F, Wu YL, Zerboni A, Cappitelli F. In Living Color: Pigment-Based Microbial Ecology At the Mineral-Air Interface. Bioscience 2022; 72:1156-1175. [PMID: 36451971 PMCID: PMC9699719 DOI: 10.1093/biosci/biac091] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023] Open
Abstract
Pigment-based color is one of the most important phenotypic traits of biofilms at the mineral-air interface (subaerial biofilms, SABs), because it reflects the physiology of the microbial community. Because color is the hallmark of all SABs, we argue that pigment-based color could convey the mechanisms that drive microbial adaptation and coexistence across different terrestrial environments and link phenotypic traits to community fitness and ecological dynamics. Within this framework, we present the most relevant microbial pigments at the mineral-air interface and discuss some of the evolutionary landscapes that necessitate pigments as adaptive strategies for resource allocation and survivability. We report several pigment features that reflect SAB communities' structure and function, as well as pigment ecology in the context of microbial life-history strategies and coexistence theory. Finally, we conclude the study of pigment-based ecology by presenting its potential application and some of the key challenges in the research.
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15
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Wu F, Zhang Y, Gu JD, He D, Zhang G, Liu X, Guo Q, Cui H, Zhao J, Feng H. Community assembly, potential functions and interactions between fungi and microalgae associated with biodeterioration of sandstone at the Beishiku Temple in Northwest China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 835:155372. [PMID: 35489512 DOI: 10.1016/j.scitotenv.2022.155372] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2022] [Revised: 04/12/2022] [Accepted: 04/14/2022] [Indexed: 05/11/2023]
Abstract
Fungi, cyanobacteria and algae are specific microbial groups associated with the deterioration and safety of stone monuments. In this study, high-throughput sequencing analysis was used to investigate the diversity, distributions, ecological functions, and interaction patterns of both the fungal and microalgal (including cyanobacteria and algae) communities on sandstone in the Beishiku Temple, located on the ancient Silk Road. The results showed that the core phyla of fungi were affiliated with unclassified Lecanoromycetes, Engyodontium, Knufia, Epicoccum, Endocarpon, and Cladosporium of Ascomycota whereas the phyla of microalgae were dominated by prokaryotic Cyanobacteria and eukaryotic Chlorophyta. The environmental factors of temperature, relative humidity, and light intensity were monitored simultaneously. The structure of the microbial communities was much more strongly shaped by soluble Cl-, Na+, NO3- ions than by the light intensity, moisture content or temperature, especially for the weathered sandstone located outside the caves. The co-occurrence network analysis suggested that a more stable community structure was evident outside the caves than inside. The stronger positive connections and coexistence patterns that were detected indicate a strong adaptability of fungi and microalgae to the distinct oligotrophic microhabitats on sandstone. The metacommunity co-occurrence network exhibited the ecological predominance of fungi, and most of the functional fungi in the biofilms outside the caves belonged to the Lichenized group, based on the FUNGuild prediction. These findings highlight the ecology and functions of stone-inhabiting microorganisms to further advance the current understanding and knowledge of sandstone biodeterioration for protection and management.
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Affiliation(s)
- Fasi Wu
- MOE Key Laboratory of Cell Activities and Stress Adaptations, Center of Grassland Microbiome, School of Life Sciences, Lanzhou University, Lanzhou, Gansu 730000, PR China; National Research Center for Conservation of Ancient Wall Paintings and Earthen Sites, Department of Conservation Research, Dunhuang Academy, Dunhuang, Gansu 736200, PR China
| | - Yong Zhang
- MOE Key Laboratory of Cell Activities and Stress Adaptations, Center of Grassland Microbiome, School of Life Sciences, Lanzhou University, Lanzhou, Gansu 730000, PR China
| | - Ji-Dong Gu
- Environmental Science and Engineering Group, Guangdong Technion - Israel Institute of Technology, 241 Daxue Road, Shantou, Guangdong 515063, PR China; Guangdong Provincial Key Laboratory of Materials and Technologies for Energy Conversion, Guangdong Technion - Israel Institute of Technology, 241 Daxue Road, Shantou, Guangdong 515063, PR China
| | - Dongpeng He
- National Research Center for Conservation of Ancient Wall Paintings and Earthen Sites, Department of Conservation Research, Dunhuang Academy, Dunhuang, Gansu 736200, PR China
| | - Gaosen Zhang
- Key Laboratory of Extreme Environmental Microbial Resources and Engineering, Gansu Province, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou, Gansu 730000, PR China
| | - Xiaobo Liu
- Environmental Science and Engineering Group, Guangdong Technion - Israel Institute of Technology, 241 Daxue Road, Shantou, Guangdong 515063, PR China; School of Environmental and Biological Engineering, Nanjing University of Science and Technology, 200 Xiaolingwei Street, Nanjing 210094, Jiangsu, PR China
| | - Qinglin Guo
- National Research Center for Conservation of Ancient Wall Paintings and Earthen Sites, Department of Conservation Research, Dunhuang Academy, Dunhuang, Gansu 736200, PR China
| | - Huiping Cui
- National Research Center for Conservation of Ancient Wall Paintings and Earthen Sites, Department of Conservation Research, Dunhuang Academy, Dunhuang, Gansu 736200, PR China
| | - Jianhua Zhao
- Shanghai Majorbio Bio-pharm Technology Co., Ltd., Shanghai 200120, PR China
| | - Huyuan Feng
- MOE Key Laboratory of Cell Activities and Stress Adaptations, Center of Grassland Microbiome, School of Life Sciences, Lanzhou University, Lanzhou, Gansu 730000, PR China.
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16
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Chieli A, Vendrell M, Roldán C, Giráldez P, Domingo I. Characterizing paint technologies and recipes in Levantine and Schematic rock art: El Carche site as a case study (Jalance, Spain). PLoS One 2022; 17:e0271276. [PMID: 35969607 PMCID: PMC9377580 DOI: 10.1371/journal.pone.0271276] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2021] [Accepted: 06/28/2022] [Indexed: 11/18/2022] Open
Abstract
This paper contributes to current debates on the technologies and practices of prehistoric artists using the rock art site of el Carche (Jalance, Spain) as a case study. The site preserves both Levantine and Schematic paintings, yet poorly understood from an analytical point of view. In the past, it has even been argued how little differentiation there is between these two post-Paleolithic traditions in terms of paint composition. Our aim with this paper was to identify pigments, paint recipes and technologies and decipher the order of the superimpositions, both between Levantine motifs of different styles, and between these and the Schematic ones. To do so, we adopted a multi-stage and multi-technical analytical strategy, trying to find a balance between sound scientific investigation and impact on the art, considering the irreplaceable nature of this World Heritage rock art. As such, our approach begins with in situ non-invasive investigations using portable EDXRF, to then collect micro-samples for non-destructive analyses by means of Optical Microscopy, Scanning Electron Microscopy coupled with Energy Dispersive X-Ray Spectroscopy (SEM-EDX), micro-Raman Spectroscopy and Fourier Transform Infrared Spectroscopy (FTIR). One of the key highlights of these paper is the identification of up to four different paint compositions, produced with various hematite-based raw materials and different processing techniques. This variability had not been previously documented. Interestingly though, no direct correlations appear to exist between styles or sub-styles and recipes. Some of these paint mixtures were even shared by both traditions. These results are discussed in cultural terms, challenging previous interpretations suggesting a similar pigment composition between Levantine and Schematic art. Microstratigraphic analysis of the cross-sections only partially clarified the overlapping sequence unveiling the complexity of these analysis. They also revealed several degradation layers and external crusts related to rock alteration processes and biological formations. Their role in rock art conservation is also discussed.
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Affiliation(s)
| | | | | | | | - Ines Domingo
- ICREA, Universitat de Barcelona, SERP, Barcelona, Spain
- * E-mail:
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17
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Holistic Approach to the Restoration of a Vandalized Monument: The Cross of the Inquisition, Seville City Hall, Spain. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12126222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/10/2022]
Abstract
The Cross of the Inquisition, sculpted in 1903 and raised on a column with a fluted shaft and ornamented with vegetable garlands, is located in a corner of the Plateresque façade of the Seville City Hall. The Cross was vandalized in September 2019 and the restoration concluded in September 2021. A geological and microbiological study was carried out in a few small fragments. The data are consistent with the exposure of the Cross of the Inquisition to an urban environment for more than 100 years. During that time, a lichen community colonized the Cross and the nearby City Hall façades. The lichens, bryophytes and fungi colonizing the limestone surface composed an urban community, regenerated from the remains of the original communities, after superficial cleaning of the limestone between 2008 and 2010. This biological activity was detrimental to the integrity of the limestone, as showed by the pitting and channels, which evidence the lytic activity of organisms on the stone surface. Stone consolidation was achieved with Estel 1000. Preventol RI80, a biocide able to penetrate the porous limestone and active against bacteria, fungi, lichens, and bryophytes, was applied in the restoration.
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18
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Abstract
Rock art is a widespread cultural heritage, representing an immovable element of the material culture created on natural rocky supports. Paintings and petroglyphs can be found within caves and rock shelters or in open-air contexts and for that reason they are not isolated from the processes acting at the Earth surface. Consequently, rock art represents a sort of ecosystem because it is part of the complex and multidirectional interplay between the host rock, pigments, environmental parameters, and microbial communities. Such complexity results in several processes affecting rock art; some of them contribute to its destruction, others to its preservation. To understand the effects of such processes an interdisciplinary scientific approach is needed. In this contribution, we discuss the many processes acting at the rock interface—where rock art is present—and the multifaceted possibilities of scientific investigations—non-invasive or invasive—offered by the STEM disciplines. Finally, we suggest a sustainable approach to investigating rock art allowing to understand its production as well as its preservation and eventually suggest strategies to mitigate the risks threatening its stability.
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Liu B, Fu R, Wu B, Liu X, Xiang M. Rock-inhabiting fungi: terminology, diversity, evolution and adaptation mechanisms. Mycology 2022; 13:1-31. [PMID: 35186410 PMCID: PMC8856086 DOI: 10.1080/21501203.2021.2002452] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Rock-inhabiting fungi (RIF) constitute an ecological group associated with terrestrial rocks. This association is generally restricted to the persistent colonisation of rocks and peculiar morphological features based on melanisation and slow growth, which endow RIF with significance in eukaryotic biology, special status in ecology, and exotic potential in biotechnology. There is a need to achieve a better understanding of the hidden biodiversity, antistress biology, origin and convergent evolution of RIF, which will facilitate cultural relic preservation, exploitation of the biogeochemical cycle of rock elements and biotechnology applications. This review focuses on summarising the current knowledge of rock-inhabiting fungi, with particular reference to terminology, biodiversity and geographic distribution, origin and evolution, and stress adaptation mechanisms. We especially teased out the definition through summing up the terms related to rock-inhabting fungi, and also provided a checklist of rock-inhabiting fungal taxa recorded following updated classification schemes.
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Affiliation(s)
- Bingjie Liu
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.,University of Chinese Academy of Sciences, Beijing, China
| | - Rong Fu
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.,University of Chinese Academy of Sciences, Beijing, China
| | - Bing Wu
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China
| | - Xingzhong Liu
- Department of Microbiology, College of Life Science, Nankai University, Tianjin, China
| | - Meichun Xiang
- State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.,University of Chinese Academy of Sciences, Beijing, China
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20
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Romani M, Warscheid T, Nicole L, Marcon L, Di Martino P, Suzuki MT, Lebaron P, Lami R. Current and future chemical treatments to fight biodeterioration of outdoor building materials and associated biofilms: Moving away from ecotoxic and towards efficient, sustainable solutions. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 802:149846. [PMID: 34464791 DOI: 10.1016/j.scitotenv.2021.149846] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/12/2021] [Revised: 08/18/2021] [Accepted: 08/19/2021] [Indexed: 06/13/2023]
Abstract
All types of building materials are rapidly colonized by microorganisms, initially through an invisible and then later a visible biofilm that leads to their biodeterioration. Over centuries, this natural phenomenon has been managed using mechanical procedures, oils, or even wax. In modern history, many treatments such as high-pressure cleaners, biocides (mainly isothiazolinones and quaternary ammonium compounds) are commercially available, as well as preventive ones, such as the use of water-repellent coatings in the fabrication process. While all these cleaning techniques offer excellent cost-benefit ratios, their limitations are numerous. Indeed, building materials are often quickly recolonized after application, and microorganisms are increasingly reported as resistant to chemical treatments. Furthermore, many antifouling compounds are ecotoxic, harmful to human health and the environment, and new regulations tend to limit their use and constrain their commercialization. The current state-of-the-art highlights an urgent need to develop innovative antifouling strategies and the widespread use of safe and eco-friendly solutions to biodeterioration. Interestingly, innovative approaches and compounds have recently been identified, including the use of photocatalysts or natural compounds such as essential oils or quorum sensing inhibitors. Most of these solutions developed in laboratory settings appear very promising, although their efficiency and ecotoxicological features remain to be further tested before being widely marketed. This review highlights the complexity of choosing the adequate antifouling compounds when fighting biodeterioration and proposes developing case-to-case innovative strategies to raise this challenge, relying on integrative and multidisciplinary approaches.
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Affiliation(s)
- Mattea Romani
- Sorbonne Université, CNRS, Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Observatoire Océanologique de Banyuls sur Mer, Avenue Pierre Fabre, 66650 Banyuls-sur-Mer, France
| | | | - Lionel Nicole
- Sorbonne Université, CNRS, Laboratoire de chimie de la matière condensée de Paris (LCMCP), 4 Place Jussieu, 75005 Paris, France
| | - Lionel Marcon
- Sorbonne Université, CNRS, Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Observatoire Océanologique de Banyuls sur Mer, Avenue Pierre Fabre, 66650 Banyuls-sur-Mer, France
| | - Patrick Di Martino
- Université de Cergy-Pontoise, Laboratoire ERRMECe, rue Descartes site de Neuville-sur-Oise, 95031 Cergy-Pontoise, France
| | - Marcelino T Suzuki
- Sorbonne Université, CNRS, Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Observatoire Océanologique de Banyuls sur Mer, Avenue Pierre Fabre, 66650 Banyuls-sur-Mer, France
| | - Philippe Lebaron
- Sorbonne Université, CNRS, Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Observatoire Océanologique de Banyuls sur Mer, Avenue Pierre Fabre, 66650 Banyuls-sur-Mer, France
| | - Raphaël Lami
- Sorbonne Université, CNRS, Laboratoire de Biodiversité et Biotechnologies Microbiennes (LBBM), Observatoire Océanologique de Banyuls sur Mer, Avenue Pierre Fabre, 66650 Banyuls-sur-Mer, France.
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21
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Bauer MA, Kainz K, Ruckenstuhl C, Madeo F, Carmona-Gutierrez D. Murals meet microbes: at the crossroads of microbiology and cultural heritage. MICROBIAL CELL (GRAZ, AUSTRIA) 2021; 8:276-279. [PMID: 34909431 PMCID: PMC8642884 DOI: 10.15698/mic2021.12.765] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Accepted: 11/30/2021] [Indexed: 06/14/2023]
Abstract
Our cultural heritage consists of manifold cultural expressions and represents a defining feature of our societies that needs to be further inherited to future generations. Even though humankind always fought a daily struggle for survival, at the same time, it seemed to have a spiritual need that went far beyond mere materialistic satisfaction and nowadays manifests in sometimes very ancient, yet brilliant artistic works. This fundamental legacy is endangered by several instances, including biodeterioration. Indeed, microorganisms play a significant role in the decline of all forms of tangible cultural heritage, including movable, immovable and underwater cultural heritage. Microbial colonization, biofilm formation and damaging metabolite production eventually result in critical decay. Thus, efforts to mitigate the negative impact of damaging microorganisms have been pursued with diverse physical, chemical and biological approaches. Intriguingly, recent advances have unveiled that specific microorganisms and microbial-based technologies also have the potential for cultural heritage preservation and present unique advantages. This short piece provides a quick overview on the duality of microorganisms in the conservation and restoration of cultural heritage.
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Affiliation(s)
- Maria A Bauer
- Institute of Molecular Biosciences, NAWI Graz, University of Graz, Graz, Austria
| | - Katharina Kainz
- Institute of Molecular Biosciences, NAWI Graz, University of Graz, Graz, Austria
| | | | - Frank Madeo
- Institute of Molecular Biosciences, NAWI Graz, University of Graz, Graz, Austria
- BioHealth Graz, Graz, Austria
- BioHealth Graz, Graz, Austria
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22
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Geochemical-Microscopical Characterization of the Deterioration of Stone Surfaces in the Cloister of Santa Maria in Vado (Ferrara, Italy). HERITAGE 2021. [DOI: 10.3390/heritage4040167] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Santa Maria in Vado is a monument in the rich artistic heritage of the city of Ferrara (north of Italy). In this paper we want to investigate the state of conservation of tombstones, cloister and the entrance to the basilica, in order to keep them in the best possible state for the future generations. From the chemical characterization, the state of conservation was determined focusing on the biodeteriogenic and non-biodeteriogenic factors, which determine a series of unwanted changes in the physical, mechanical and above all aesthetic properties of the material, often closely connected with the environment and conservation conditions. On the macroscopic observation, the state of conservation of the tombstones appeared to be very deteriorated through aesthetic and structural damage. In detail, the stereo microscope observation of samples collected from the tombstones show the presence of efflorescence probably caused by the abundant of water that bring the salts present inside the rock into solution. Relating the columns, μ-XRF analysis confirm the carbonate composition of samples and presence of iron and sulfur. Finally, SEM observation highlighted the presence of black crust on arch samples and the presence of pollen on the black crust and spheroidal particles probably related to atmospheric pollution.
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23
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Black on White: Microbial Growth Darkens the External Marble of Florence Cathedral. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app11136163] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Weathering processes seriously affect the durability of outdoor marble monuments. In urban environments, a very common deterioration phenomenon is the dark discoloration or blackening of marble. This paper describes a multidisciplinary study on the state of conservation of white marbles of the Florence Cathedral and the microbial community involved in their deterioration. The study is focused on the widespread dark discoloration of marble analyzed in two differently exposed sites of the Cathedral. It aims to provide information useful for future interventions to control the microbial growth. By chemical and petrographic analysis, in situ and ex situ microscopy, and cultivation and identification of microorganisms, it was found that (i) the darkening is mainly due to the growth of black fungi and dark cyanobacteria and (ii) the state of conservation of marble and the growth pattern of microorganisms seems to be linked to the microclimatic conditions, in particular to solar radiation exposure. This is the first report on the lithobiontic community inhabiting the Florence Cathedral marbles, with a more detailed investigation of the culturable mycobiota.
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Abstract
Cultural heritage buildings of stone construction require careful restorative actions to maintain them as close to the original condition as possible. This includes consolidation and cleaning of the structure. Traditional consolidants may have poor performance due to structural drawbacks such as low adhesion, poor penetration and flexibility. The requirement for organic consolidants to be dissolved in volatile organic compounds may pose environmental and human health risks. Traditional conservation treatments can be replaced by more environmentally acceptable, biologically-based, measures, including bioconsolidation using whole bacterial cells or cell biomolecules; the latter include plant or microbial biopolymers and bacterial cell walls. Biocleaning can employ microorganisms or their extracted enzymes to remove inorganic and organic surface deposits such as sulfate crusts, animal glues, biofilms and felt tip marker graffiti. This review seeks to provide updated information on the innovative bioconservation treatments that have been or are being developed.
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25
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Impact of Herbicide Treatments on the Construction Materials in the Roman Wall of Lugo, Spain (UNESCO World Heritage Site). APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app11115276] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Combined laboratory and field research examining the possible alterations caused by herbicide treatments applied to the construction materials (schist and some granite, bound with mortar) in the Roman wall of Lugo (NW Spain), declared a World Heritage site by UNESCO in 2000, was performed in three separate studies in the past 20 years. In the summers of 1998 and 1999, the herbicides glyphosate, sulphosate and glufosinate–ammonium, as well as physical treatments (infrared and burning) were separately applied to different areas of the wall. In the spring of 2016, the oxyfluorfen herbicide Goal Supreme® was applied to test areas. In the winter of 2018, three essential oils, Origanum vulgare L., Thymus zygis Loefl. ex L., and Thymus vulgaris L., were each applied to test areas. Mineralogical modifications in the materials (determined by X-ray diffraction analysis), as well as visible physical changes, such as colour changes, and the appearance of saline residues were evaluated after the treatments. In the 1998/9 trial, glyphosate and both physical treatments triggered changes in the vermiculite clay minerals in the schists, and the physical treatments also caused changes in the kaolinite. None of the treatments caused highly perceptible colour changes. The oxyfluorfen herbicide did not cause any mineralogical alterations in the construction materials, but it did generate an increase in chloride, nitrate and sulphate contents of the granite and a slight darkening of this material. In the most recent study, the only deleterious effect observed was a perceptible increase in lightness and reduction in the yellow component after the application of Thymus zygis Loefl. ex L. essential oil to granite.
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Role of Exposure on the Microbial Consortiums on Historical Rural Granite Buildings. APPLIED SCIENCES-BASEL 2021. [DOI: 10.3390/app11093786] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Local granite has been used throughout history in Galicia (NW Spain), forming the basis of much of the region’s architecture. Like any other rock, granite provides an ecological niche for a multitude of organisms that form biofilms that can affect the physical integrity of the stone. In this study, for the first time, characterization of the microbial consortium forming biofilms that developed on historical rural granite buildings is carried out using a combination of culture-dependent and next generation sequencing (NGS) techniques. Results pointed to differences in biofilm composition on the studied rural granite buildings and that of previously analyzed urban granite buildings, especially in terms of abundance of cyanobacteria and lichenized fungi. Exposure was corroborated as an important factor, controlling both the diversity and abundance of microorganisms on walls, with environmental factors associated with a northern orientation favoring a higher diversity of fungi and green algae, and environmental factors associated with the west orientation determining the abundance of lichenized fungi. The orientation also affected the distribution of green algae, with one of the two most abundant species, Trentepohlia cf. umbrina, colonizing north-facing walls, while the other, Desmococcus olivaceus, predominated on west-facing walls.
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Ellis CJ, Asplund J, Benesperi R, Branquinho C, Di Nuzzo L, Hurtado P, Martínez I, Matos P, Nascimbene J, Pinho P, Prieto M, Rocha B, Rodríguez-Arribas C, Thüs H, Giordani P. Functional Traits in Lichen Ecology: A Review of Challenge and Opportunity. Microorganisms 2021; 9:766. [PMID: 33917569 PMCID: PMC8067525 DOI: 10.3390/microorganisms9040766] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 03/28/2021] [Accepted: 03/31/2021] [Indexed: 01/29/2023] Open
Abstract
Community ecology has experienced a major transition, from a focus on patterns in taxonomic composition, to revealing the processes underlying community assembly through the analysis of species functional traits. The power of the functional trait approach is its generality, predictive capacity such as with respect to environmental change, and, through linkage of response and effect traits, the synthesis of community assembly with ecosystem function and services. Lichens are a potentially rich source of information about how traits govern community structure and function, thereby creating opportunity to better integrate lichens into 'mainstream' ecological studies, while lichen ecology and conservation can also benefit from using the trait approach as an investigative tool. This paper brings together a range of author perspectives to review the use of traits in lichenology, particularly with respect to European ecosystems from the Mediterranean to the Arctic-Alpine. It emphasizes the types of traits that lichenologists have used in their studies, both response and effect, the bundling of traits towards the evolution of life-history strategies, and the critical importance of scale (both spatial and temporal) in functional trait ecology.
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Affiliation(s)
| | - Johan Asplund
- Faculty of Environmental Sciences and Natural Resource Management, Norwegian University of Life Sciences, 5003 NO-1432 Ås, Norway;
| | - Renato Benesperi
- Dipartimento di Biologia, Università di Firenze, Via la Pira, 450121 Florence, Italy; (R.B.); (L.D.N.)
| | - Cristina Branquinho
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências, Universidade de Lisboa, Campo Grande, C2, Piso 5, 1749-016 Lisboa, Portugal; (C.B.); (P.P.); (B.R.)
| | - Luca Di Nuzzo
- Dipartimento di Biologia, Università di Firenze, Via la Pira, 450121 Florence, Italy; (R.B.); (L.D.N.)
| | - Pilar Hurtado
- Área de Biodiversidad y Conservación, Departamento de Biología, Geología, Física y Química Inorgánica, ESCET, Universidad Rey Juan Carlos, 28933 Móstoles, Spain; (P.H.); (I.M.); marí (M.P.); (C.R.-A.)
- Departamento de Biología (Botánica), Universidad Autónoma de Madrid, c/Darwin, 2, 28049 Madrid, Spain
| | - Isabel Martínez
- Área de Biodiversidad y Conservación, Departamento de Biología, Geología, Física y Química Inorgánica, ESCET, Universidad Rey Juan Carlos, 28933 Móstoles, Spain; (P.H.); (I.M.); marí (M.P.); (C.R.-A.)
| | - Paula Matos
- MARE—Marine and Environmental Sciences Centre, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal;
| | - Juri Nascimbene
- Department of Biological, Geological and Environmental Sciences, Alma Mater Studiorum, University of Bologna, I-40126 Bologna, Italy;
| | - Pedro Pinho
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências, Universidade de Lisboa, Campo Grande, C2, Piso 5, 1749-016 Lisboa, Portugal; (C.B.); (P.P.); (B.R.)
| | - María Prieto
- Área de Biodiversidad y Conservación, Departamento de Biología, Geología, Física y Química Inorgánica, ESCET, Universidad Rey Juan Carlos, 28933 Móstoles, Spain; (P.H.); (I.M.); marí (M.P.); (C.R.-A.)
| | - Bernardo Rocha
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências, Universidade de Lisboa, Campo Grande, C2, Piso 5, 1749-016 Lisboa, Portugal; (C.B.); (P.P.); (B.R.)
| | - Clara Rodríguez-Arribas
- Área de Biodiversidad y Conservación, Departamento de Biología, Geología, Física y Química Inorgánica, ESCET, Universidad Rey Juan Carlos, 28933 Móstoles, Spain; (P.H.); (I.M.); marí (M.P.); (C.R.-A.)
| | - Holger Thüs
- Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany;
| | - Paolo Giordani
- DIFAR, University of Genova, Viale Cembrano, 4, I-16148 Genova, Italy;
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The Control of Cultural Heritage Microbial Deterioration. Microorganisms 2020; 8:microorganisms8101542. [PMID: 33036341 PMCID: PMC7600914 DOI: 10.3390/microorganisms8101542] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2020] [Revised: 10/02/2020] [Accepted: 10/04/2020] [Indexed: 11/24/2022] Open
Abstract
The microbial deterioration of cultural heritage includes physical and chemical damage as well as aesthetic alteration. With the technological advancement, a plethora of techniques for removing unwanted microorganisms have opened up new opportunities for microbiologists and conservators. This article reviews the most applied, up-to-date, and sustainable techniques developed for the control of cultural heritage microbial deterioration presenting noteworthy case studies. These techniques include chemical methods, i.e., traditional biocides and nanoparticles; physical methods, such as mechanical removal, UV irradiation, gamma radiation, laser cleaning, heat shocking, microwaves, and dry ice treatment; and biological methods, such as natural molecules with biocidal activity, enzymes, and microorganisms. The application of control systems requires the comprehension of their behavior toward the unwanted microorganisms and possible interactions with the heritage materials. This overview shows also the control methods drawbacks for the purpose of creating awareness in selecting the most suitable technique or combination of techniques.
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Frequent Microalgae in the Fountains of the Alhambra and Generalife: Identification and Creation of a Culture Collection. APPLIED SCIENCES-BASEL 2020. [DOI: 10.3390/app10186603] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Cyanobacteria, green algae and diatoms are significant factors in the biodeterioration of stone cultural heritage sites, and specifically fountain monuments, due to the constant presence of water. In this study, samples were taken from different fountains in the Alhambra and Generalife, which are among the Spanish monuments of greatest historical and artistic value and which together were declared a World Heritage Site by UNESCO in 1984. The aim was to identify which species of colonising microalgae are most frequent and to obtain monoalgal cultures from them. From a conservation point of view, it is interesting to identify which algae are growing in these fountains and how they behave in order to develop new methods to control their growth. The most abundant groups of algae in our samples were green algae and cyanobacteria. The most common genera in the former group were Bracteacoccus, Chlorosarcina, Chlorosarcinopsis, Apatococcus and Klebsormidium. As for cyanobacteria, the most abundant genera were Phormidium, Calothrix, Leptolyngbya, Chamaesiphon, Pleurocapsa and Chlorogloea. Using our collected samples, 10 genera of green algae and 13 genera of cyanobacteria were isolated, thereby constituting the base samples for the creation of a reference collection of living algae from the Alhambra and Generalife contexts, which can be used in subsequent studies to develop new types of treatment against biodeterioration.
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