Managing long-term polycyclic aromatic hydrocarbon contaminated soils: a risk-based approach

PAH bioremediation with Rhodococcus rhodochrous ATCC 21198: Impact of cell immobilization and surfactant use on PAH treatment and post-remediation toxicity

Polycyclic aromatic hydrocarbons (PAHs) are prevalent environmental contaminants that are harmful to ecological and human health. Bioremediation is a promising technique for remediating PAHs in the environment, however bioremediation often results in the accumulation of toxic PAH metabolites. The objectives of this research were to demonstrate the cometabolic treatment of a mixture of PAHs by a pure bacterial culture, Rhodococcus rhodochrous ATCC 21198, and investigate PAH metabolites and toxicity. Additionally, the surfactant Tween ® 80 and cell immobilization techniques were used to enhance bioremediation. Total PAH removal ranged from 70-95% for fluorene, 44-89% for phenanthrene, 86-97% for anthracene, and 6.5-78% for pyrene. Maximum removal was achieved with immobilized cells in the presence of Tween ® 80. Investigation of PAH metabolites produced by 21198 revealed a complex mixture of hydroxylated compounds, quinones, and ring-fission products. Toxicity appeared to increase after bioremediation, manifesting as mortality and developmental effects in embryonic zebrafish. 21198's ability to rapidly transform PAHs of a variety of molecular structures and sizes suggests that 21198 can be a valuable microorganism for catalyzing PAH remediation. However, implementing further treatment processes to address toxic PAH metabolites should be pursued to help lower post-remediation toxicity in future studies.

Identification of an efficient phenanthrene-degrading Pseudarthrobacter sp. L1SW and characterization of its metabolites and catabolic pathway

Phenanthrene, a typical chemical of polycyclic aromatic hydrocarbons (PAHs) pollutants, severely threatens health of wild life and human being. Microbial degradation is effective and environment-friendly for PAH removal, while the phenanthrene-degrading mechanism in Gram-positive bacteria is unclear. In this work, one Gram-positive strain of plant growth-promoting rhizobacteria (PGPR), Pseudarthrobacter sp. L1SW, was isolated and identified with high phenanthrene-degrading efficiency and great stress tolerance. It degraded 96.3% of 500 mg/L phenanthrene in 72 h and kept stable degradation performance with heavy metals (65 mg/L of Zn2+, 5.56 mg/L of Ni2+, and 5.20 mg/L of Cr3+) and surfactant (10 CMC of Tween 80). Strain L1SW degraded phenanthrene mainly through phthalic acid pathway, generating intermediate metabolites including cis-3,4-dihydrophenanthrene-3,4-diol, 1-hydroxy-2-naphthoic acid, and phthalic acid. A novel metabolite (m/z 419.0939) was successfully separated and identified as an end-product of phenanthrene, suggesting a unique metabolic pathway. With the whole genome sequence alignment and comparative genomic analysis, 19 putative genes associated with phenanthrene metabolism in strain L1SW were identified to be distributed in three gene clusters and induced by phenanthrene and its metabolites. These findings advance the phenanthrene-degrading study in Gram-positive bacteria and promote the practical use of PGPR strains in the bioremediation of PAH-contaminated environments.

Performance of a gross pollutant trap-biofilter and sand filter treatment train for the removal of organic micropollutants from highway stormwater (field study)

This field study assessed the occurrence, event mean concentrations (EMCs), and removal of selected organic micro-pollutants (OMPs), namely, polycyclic aromatic hydrocarbons (PAHs), petroleum hydrocarbons (PHCs), nonylphenol (NP), 4-t-octylphenol (OP), and bisphenol A (BPA), in a gross pollutant trap (GPT)-biofilter/sand filter stormwater treatment train in Sundsvall, Sweden. The effects of design features of each treatment unit, including pre-sedimentation (GPT), sand filter medium, vegetation, and chalk amendment, were investigated by comparing the units' removal performances. Overall, the treatment train removed most OMPs from highway runoff effectively. The results showed that although the sand filter provided moderate (<50 % for phenolic substances) to high (50-80 % for PAHs and PHCs) removal of OMPs, adding a vegetated soil layer on top of the sand filter considerably improved the removal performance (by at least 30 %), especially for BPA, OP, and suspended solids. Moreover, GTP did not contribute to the treatment significantly. Uncertainties in the removal efficiencies of PAHs and PHCs by the filter cells increased substantially when the ratio of the influent concentration to the limit of quantification decreased. Thus, accounting for such uncertainties due to the low OMP concentrations should be considered when evaluating the removal performance of biofilters.

A century-long record of polycyclic aromatic hydrocarbon deposition in the Old Yellow River Estuary, China

Polycyclic aromatic hydrocarbons (PAHs) are potential geochemical indicators for assessing the impact of human activities and can be used to reconstruct historical human activities. This study collected a 108 cm sediment core from the 5th lobe of the Yellow River Delta for the first time and analyzed the historical distribution characteristics of PAHs in this area. The results showed that the sedimentation history of the core was from 1908 to 2014. The average value of PAHs was 28.93 ng/g. Biomass and coal combustion sources were the main sources of PAHs in the low-value areas, while oil spill sources were the main sources in the significantly higher PAHs areas in the 1960s, mid-1980s, late 1990s, and late 2010s, which was consistent with the development history of Shengli Oilfield. Compared with global estuaries, the historical industrial activity intensity in this area was weaker.

Effect of electric fields strength on soil factors and microorganisms during electro-bioremediation of benzo[a]pyrene-contaminated soil

Electro-bioremediation is a promising technology for remediating soils contaminated with polycyclic aromatic hydrocarbons (PAHs). However, the resulting electrokinetic effects and electrochemical reactions may inevitably cause changes in soil factors and microorganism, thereby reducing the remediation efficiency. To avoid negative effect of electric field on soil and microbes and maximize microbial degradability, it is necessary to select a suitable electric field. In this study, artificial benzo [a]pyrene (BaP)-contaminated soil was selected as the object of remediation. Changes in soil factors and microorganisms were investigated under the voltage of 1.0, 2.0, and 2.5 V cm-1 using chemical analysis, real-time PCR, and high-throughput sequencing. The results revealed noticeable changes in soil factors (pH, moisture, electrical conductivity [EC], and BaP concentration) and microbes (PAHs ring-hydroxylating dioxygenase [PAHs-RHDα] gene and bacterial community) after the application of electric field. The degree of change was related to the electric field strength, with a suitable strength being more conducive to BaP removal. At 70 d, the highest mean extent of BaP removal and PAHs-RHDα gene copies were observed in EK2.0 + BIO, reaching 3.37 and 109.62 times those in BIO, respectively, indicating that the voltage of 2.0 V cm-1 was the most suitable for soil microbial growth and metabolism. Changes in soil factors caused by electric fields can affect microbial activity and community composition. Redundancy analysis revealed that soil pH and moisture had the most significant effects on microbial community composition (P < 0.05). The purpose of this study was to determine the appropriate electric field that could be used for electro-bioremediation of PAH-contaminated soil by evaluating the effects of electric fields on soil factors and microbial communities. This study also provides a reference for efficiency enhancement and successful application of electro-bioremediation of soil contaminated with PAHs.

Current trends in bioremediation and bio-integrated treatment of petroleum hydrocarbons

Petroleum hydrocarbons and their derivatives constitute the leading group of environmental pollutants worldwide. In the present global scenario, petroleum and natural gas production, exploration, petroleum refining, and other anthropogenic activities produce huge amounts of hazardous petroleum wastes that accumulate in the terrestrial and marine environment. Due to their carcinogenic, neurotoxic, and mutagenic characteristics, petroleum pollutants pose severe risks to human health and exert ecotoxicological effects on the ecosystems. To mitigate petroleum hydrocarbons (PHs) contamination, implementing "green technologies" for effective cleanup and restoration of an affected environment is considered as a pragmatic approach. This review provides a comprehensive outline of newly emerging bioremediation technologies, for instance; nanobioremediation, electrokinetic bioremediation, vermiremediation, multifunctional and sustainably implemented on-site applied biotechnologies such as; natural attenuation, biostimulation, bioaugmentation, bioventing, phytoremediation and multi-process hybrid technologies. Additionally, the scope of the effectiveness and limitations of individual technologies in treating the petroleum hydrocarbon polluted sites are also evaluated.

Inhalation bioaccessibility and risk assessment for PM-bound organic components: Co-effects of component physicochemical properties, PM properties, and sources

Inhalation bioaccessibility and deposition in respiratory tracts of organic components in atmospheric particulate matter (PM) are key factors for accurately estimating health risks and understanding human exposures. This study evaluated the in-vitro inhalation bioaccessibility of polycyclic aromatic hydrocarbons (PAHs) and PAH derivatives, phthalic acid esters (PAEs), polychlorinated biphenyls (PCBs), and organophosphate flame retardants (OPFRs) in size-resolved PM from a Chinese megacity. The bioaccessibility ranged from 0.2% to 77.8% in the heating period (HP), and from 0.7% to 94.2% in the non-heating period (NHP). Result suggests that less hydrophobic organics might be more bioaccessible. Bioaccessibility of medium logKow organics in sizes > 0.65 µm was significantly inhibited by high carbon fractions, indicating the co-effects. Then, this is the first study to explore effects of sources on inhalation bioaccessibility of organics. Coal and biomass combustion in HP and traffic emission in NHP negatively correlated with bioaccessibility. Secondary particles also negatively correlated with bioaccessibility of medium logKow organics. Incremental lifetime cancer risk (ILCR) and non-cancer risk (HQ) for all measured components in PM10 were estimated after considering the bioaccessibility and deposition efficiencies and the HQ and ILCR were within the acceptable range. BaP and DEHP were strong contributors to HQ and ILCR, respectively.

Ecological and human health risk assessment of polycyclic aromatic hydrocarbons (PAH) in Tigris river near the oil refineries in Iraq

Recent Iraqi battles against ISIS in 2014 and 2015 resulted in the destruction or severe damage to several refineries' infrastructure. This, along with other factors, has led to the release and accumulation of a wide range of hazardous chemicals into the environment, for instance, polycyclic aromatic hydrocarbons (PAH). Thus, for the first time, a comprehensive 16 PAHs measurements campaign over the course of six months near the oil refineries along the Tigris River and its estuaries was investigated. The 16 PAHs concentrations in surface water and the sediments for the following oil refineries: Baiji, Kirkuk, Al-Siniyah, Qayyarah, Al-Kasak, Daura, South Refineries Company, and Maysan were examined. The overall findings indicated that the 16 PAHs concentrations ranged from 567.8 to 3750.7 ng/L for water and 5619.2-12795.0 ng/g for sediment. Water samples in South Refineries Company recorded the highest PAH concentrations while Baiji oil refinery registered the highest PAH concentrations in the sediment samples. The percentages of high molecular weight PAH (5-6 rings) in water and sediment samples were the highest, ranging from 49.41% to 81.67% and from 39.06% to 89.39% of total PAH for water and sediment, respectively. The majority of 16 PAHs measured in water and sediment samples of the Tigris River were derived from pyrogenic sources. Based on sediment quality guidelines (SQGs), most sites showed a possible effect range with occasional biological effects of most of the PAH concentrations in all sediments' samples. The calculated incremental lifetime cancer risk (ILCR) value was high risk with adverse health effects, including cancer.

Effects of source materials on desorption kinetics of carcinogenic PAHs from contaminated soils

Research investigating the desorptive behaviour of PAHs from contaminated soils often overlooked the effects of source materials, especially coal tar and coal tar pitch and materials alike. In this study, a refined experimental approach was adopted to establish a simple-to-complex continuum of systems that allow the investigation of desorption kinetics of benzo(a)pyrene (BaP) and 3 other carcinogenic PAHs (cPAHs) over an incubation period of 48 d. By comparing the modelled desorption parameters, elucidation of the effects of PAH source materials on their desorptive behaviour was achieved. Desorption of cPAHs from coal tar and pitch was enhanced when they were added to soils, with rapidly desorbing fraction (F_rap) of BaP increased from 0.68% for pitch to 1.10% and 2.66% for pitch treated soils, and from 2.57% for coal tar to 6.24% for coal tar treated soil G and 8.76% for coal tar treated sand (1 d). At 1 d, desorption of target cPAHs from solvent and source material spiked soils generally followed the order of solvent > coal tar > pitch. Increases in F_rap of cPAHs were observed in coal tar-treated soils after 48 d soil incubation (0.33%-1.16% for soil M, p ≥ 0.05, 6.24%-9.21% for soil G, p < 0.05) and was attributed to the continuous migration of coal tar as a non-aqueous phase liquid (NAPL) into soil pore structures. Slow desorption was dominated by source materials, whereas the extents and rates of rapid desorption (F_rap and k_rap) were more controlled by the quantity of soil organic matter (SOM), rather than quality of SOM (as in solvent-spiked soils). The results of this study challenged the role of PAH source materials as 'sinks' and led to the proposed roles of coal tar and pitch and source materials alike as 'reservoirs' with a risk-driven perspective.

The derivation of soil generic assessment criteria for polychlorinated biphenyls under the agricultural land scenario in Pearl and Yangtze River Delta regions, China

The agricultural soils in China are suffered from serious polychlorinated biphenyls (PCBs) contamination, however, the valid management standards for farmland are absent to efficiently control the health risks of PCBs exposure. This study analyzed the contamination characteristics and main composition of PCBs in agricultural soils of the southeastern China from the published literature over the past 20 years, and derived the regional generic assessment criteria (GAC) using an exposure modelling approach for individual and total PCBs (∑PCBs) via multiple exposure pathways such as ingestion of soil and dust, consumption of vegetables, dermal contact with soil and dust, ingestion of soil attached to vegetables, and inhalation of soil vapour and soil-derived dust outdoors under the agricultural land scenario. It is identified that the averaged ∑PCBs concentration of 80.03 ng g^-1 under the 95 % lower confidence limit with an unacceptable health risk of 4.8 × 10^-6 has significantly exceeded the integrated generic assessment criteria (expressed as GAC_int) of 16.5 ng g^-1. Accordingly, the exposure pathways from the consumption of agricultural produces and indirect ingestion of soil attached to vegetables contributed up to 62 %-88 % of the total exposure, followed by 11 %-33 % of the soil ingestion and 2 %-6 % of dermal contact. The derived GAC_int for ∑PCBs is extremely valuable to effectively assess and manage the PCBs contamination in agricultural soils of China.

Novel insights into the predominant factors affecting the bioavailability of polycyclic aromatic hydrocarbons in industrial contaminated areas using PLS-developed model

Bioavailability is recognized as a useful technical standard for risk assessment and pollution rehabilitation. However, knowledge on the bioavailability of polycyclic aromatic hydrocarbons (PAHs) in contaminated site soils is still limited, especially concerning the influential mechanism. With an abundance of soil collections from nine industrial areas in China, the bioavailabilities, as conceptually defined as bioconcentration factors (BCFs) of PAHs were analyzed using biomimetic extraction of hydroxypropyl-β-cyclodextrin (HPCD). Apart from the total content of PAHs varying with the different pyrogenic sources, the BCFs were greatly dependent on the soil physicochemical properties from the spatial scale and inversely proportional to the number of rings. Pearson correlation analysis indicated a weak relationship between bioavailability and the soil dissolved organic matter (DOM), pH and particle size. To incorporate the soil physicochemical properties and structural characteristics of PAHs determined by density functional theory (DFT), the optimum model for bioavailability was developed for BCFs by partial least square (PLS) analysis. The PLS-derived model was shown to be predictive within the applicability domain (AD). The structural characteristics, e.g., molecular polarizability and frontier orbital energy level that favor the soil adsorption of PAH isomers via dispersion interactions, and electron exchanges were indicated to be more impactful on bioavailability than soil environmental factors. However, soil factors should not be neglected, because the pH, DOM, etc. were significantly influential. It makes sense that the higher DOM causes greater bioavailability via increasing the free-dissolved fractions of PAHs. Interestingly, the effect of pH on bioavailability was spectrally validated by excitation-emission matrix (EEM) fluorescence, showing that the interaction between DOM and pyrene strengthened the fluorescence quenching of chromophores with the decline in pH.

Variations in the concentration, source and flux of polycyclic aromatic hydrocarbons in sediments of the Pearl River Estuary: Implications for anthropogenic impacts

Variations in the distribution, source composition, mass inventory and burial flux of polycyclic aromatic hydrocarbons (PAHs) in surface sediments from the Pearl River Estuary (PRE) collected in 2011 and 2019 were analyzed to investigate the influence of the anthropogenic activities. Total concentrations of 16 priority PAHs in 2019 (200.40 ± 188.86 ng g^-1 dry weight on average) were at the medium level among global bays/estuaries/coastal areas. In 2019, PAH concentrations have decreased by about 50% compared to 2011 and the dominant composition has changed from low- to high-molecular-weight PAHs. The qualitative and quantitative source apportionment analysis indicates that the dominant source of PAHs has shifted from petroleum (40.33%) in 2011 to traffic emission (44.17%) in 2019. The source variation in the PRE can be attributed to the transformation of the energy source structure from petrogenic to pyrogenic in the Pearl River Delta. The estimated PAH mass inventory of the top 5-cm sediment was 38.70 metric tons in 2019, which was about 41 metric tons lower than that in 2011. The average deposition fluxes have dropped from 418.91 ± 261.02 ng cm^-2 yr^-1 in 2011 to 215.52 ± 246.63 ng cm^-2 yr^-1 in 2019. The decreasing PAH concentration is related to the sediment coarsening and decline of total organic carbon. These findings in the PRE can be applied to other estuarine environments influenced by anthropogenic activities.

Evaluation of negative effect of Naphthenic acids (NAs) on physiological metabolism and polycyclic aromatic hydrocarbons adsorption of Phragmites australis

Toxic substances in the environment disturb the adsorption of pollutants in plants but little is known about the underlying mechanisms of these processes. This study evaluated the PAH adsorption by Phragmites australis under NAs stress. Results showed that Naphthenic acids (NAs) significantly decreased the adsorption of PAHs and had higher selectivity for type and structure. P. australis root cell growth and mitosis were significantly affected by NAs, which was accompanied by serious disturbances in mitochondrial function. The physiological evaluation showed the NAs could increase Reactive Oxygen Species (ROS) accumulation by around 16-fold and cause damage to the root cell normal redox equilibrium. The levels of three key related antioxidants, PLA, CAT and POD, decreased significantly to 35-50% under NAs stress and were dependent upon NAs concentration. Furthermore, NAs could significantly change the concentration and species of root exudates of P. ausralis. Autotoxic substances, including alcohol and amines, increased by 28.63% and 23.96, respectively. Sixteen compounds were identified and assumed as potential biomarkers. Galactonic, glyceric, and octadecanoic acid had the general effect of activating PAH in soil. The global view of the metabolic pathway suggests that NAs influenced the citric acid cycle, fatty acid synthesis, amino acid metabolism and the phenylpropanoid pathway. Detection data results indicated that the energy products cause hypoxia and oxidative stress, which are the main processes under the NAs. Furthermore, verification of these processes was fulfilled through gene expression and biomarkers quantification. Our results provide novel metabolic insights into the mechanisms of PAHs adsorption by P. australis under NAs disturbance, suggesting that monitoring NAs in phytoremediation applications is necessary.

Remediation of industrial site soil contaminated with PAHs using stage persulfate oxidation activated by Fe2+ chelated with sodium citrate

The remediation for industrial site soil has attracted public concerns because of the hazardous and hydrophobic properties of organic pollutants existed in the soil. The persulfate oxidation activated by Fe²⁺ chelated with sodium citrate (PS/Fe²⁺/SC) was used to remediate different types of industrial site soils in the present study. The maximum removal rates of Σ16 PAHs in the Nanjing site soil (NJS) and Hefei site soil (HFS) were 73.6% and 85.8% after the second-stage oxidation, respectively. The late oxidation stages couldn't enhance the degradation efficiency of PAHs due to the increase of high crystalline Fe mineral phases both in the NJS and HFS, which significantly decreased the Fe²⁺/Fe³⁺ recycle and further inhibited the reactive oxygen species production during the remediation. The remediation using PS/Fe²⁺/SC could change the soil physicochemical properties, such as the functional groups, specific surface area (SSA), total pore volume (TPV) and some UV spectral parameters of soil particles. Additionally, the oxidation of PS/Fe²⁺/SC also altered the composition of soil dissolve organic matters, especially the fulvic acid, which further affected the Fe²⁺ oxidation. The study mainly discloses the mechanism of limitation using persulfate oxidation activated by Fe materials at late oxidation stage.

Roles of oxidant, activator, and surfactant on enhanced electrokinetic remediation of PAHs historically contaminated soil

Electrokinetic (EK) remediation technology can enhance the migration of reagents to soil and is especially suitable for in situ remediation of low permeability contaminated soil. Due to the long aging time and strong hydrophobicity of polycyclic aromatic hydrocarbons (PAHs) from historically polluted soil, some enhanced reagents (oxidant, activator, and surfactant) were used to increase the mobility of PAHs, and remove and degrade PAHs in soil. However, under the electrical field, there are few reports on the roles and combined effect of oxidant, activator, and surfactant for remediation of PAHs historically contaminated soil. In the present study, sodium persulfate (PS, oxidant, 100 g L^-1) or/and Tween 80 (TW80, surfactant, 50 g L^-1) were added to the anolyte, and citric acid chelated iron(II) (CA-Fe(II), activator, 0.10 mol L^-1) was added to catholyte to explore the roles and contribution of enhanced reagents and combined effect on PAHs removal in soil. A constant voltage of 20 V was applied and the total experiment duration was 10 days. The results showed that the removal rate of PAHs in each treatment was PS + CA-Fe(II) (21.3%) > PS + TW80 + CA-Fe(II) (19.9%) > PS (17.4%) > PS + TW80 (11.4%) > TW80 (8.1%) > CK (7.5%). The combination of PS and CA-Fe(II) had the highest removal efficiency of PAHs, and CA-Fe(II) in the catholyte could be transported toward anode via electromigration. The addition of TW80 reduced the electroosmotic flow and inhibited the transport of PS from anolyte to the soil, which decreased the removal of PAHs (from 17.4 to 11.4% with PS, from 21.3 to 19.9% with PS+CA-Fe(II)). The calculation of contribution rates showed that PS was the strongest enhancer (3.3~9.9%), followed by CA-Fe(II) (3.9~8.5%) (with PS), and the contribution of TW80 was small and even negative (-1.4~0.6%). The above results indicated that the combined application of oxidant and activator was conducive to the removal of PAHs, while the addition of surfactant reduced the EOF and the migration of oxidant and further reduced the PAHs removal efficiency. The present study will help to further understand the role of enhanced reagents (especially surfactant) during enhanced EK remediation of PAHs historically contaminated soil.

Modelling polycyclic aromatic hydrocarbon bioavailability in historically contaminated soils with six in-vitro chemical extractions and three earthworm ecotypes

Accurate prediction of organic contaminant bioavailability for risk assessment in ecological applications is hindered by limited validation on relevant bioassay species. Here, six in-vitro chemical extraction methods (butanol, non-buffered and buffered hydroxypropyl-β-cyclodextrin (HPCD, Buf-HPCD), Tenax, potassium persulfate oxidation, polyoxymethylene solid phase extraction (POM)) were tested for PAH bioaccumulation prediction in three earthworm ecotypes with dissimilar exposures, Amynthas sp., Eisenia fetida, and Lumbricus terrestris, in historically contaminated soils from manufactured gas plant (MGP) sites. Extractions were compared directly and modelled in a calculation approach using equilibrium partitioning theory (EqPT) with a novel combination of different organic carbon/octanol-water partitioning parameters (K_OC and K_OW). In the direct comparison approach Buf-HPCD showed the closest prediction of accumulation for burrowing Amynthas sp. and L. terrestris (within 1.5 and 3.1, respectively), but Tenax and POM showed the closest approximation for E. fetida (within 1.1 and 0.9, respectively). The optimum method for predicting PAH bioaccumulation in the calculation approach depended on earthworm species and the partitioning parameters used in equations of the four models, but overall POM, which was independent of K_OC, showed the closest approximation of accumulation, within a factor of 2.5 across all species. This work effectively identifies the optimum in-vitro based approaches for PAH bioavailability prediction in earthworms as a model soil health indicator for ecological risk assessment within regulatory and remediation decision frameworks.

Risk control and assessment of sulfide-rich sediment remediation by controlled-release calcium nitrate

Nitrate stimulation is widely used in sediment remediation to eliminate sulfides, degrade organic pollutants and immobilize phosphorus. However, the environmental risks of nitrate escape and the subsequent release of pollutants (e.g. nitrite, ammonium and trace metals) to water bodies during its application has received less attention. In this study, controlled-release nitrate pellets (SedCaN pellets) were manufactured and applied at different sediment depths to examine their effectiveness in controlling the risk of nitrate escape and subsequent pollutant release. The germination of submerged plant was also analyzed to assess the ecological risks associated with the remediated sediment. The results showed that the SedCaN pellets slowly released calcium nitrate, which led to denitrifying sulfide oxidation, organic matter degradation and the immobilization of phosphorus as a calcium-bound species. Gas production by denitrification increased the sediment porosity (0.3-2.2%) and led to the concomitant release of nitrite, ammonium, and heavy metals, creating secondary risks. Application of the SedCaN pellets at depth decreased the nitrate escape and the secondary risks, presumably by means of a capping effect of the upper sediment. The release of nitrate, ammonium, Ni and Cu were partially limited by 91.6%, 19.0%, 61.6% and 57.4% when SedCaN pellets were incorporated into deeper sediments (7-9 cm). Moreover, the range of sulfide oxidation extended to the upper and lower sediments in the profile (column), while the sulfide oxidation efficiency reached 85.9-95.0%. Finally, increased germination of Bacopa monnieri (20.0-26%) demonstrated that in comparison to reference materials the ecological risks of the treated sediments was reduced and the habitat function of sediment was restored after nitrate-stimulating remediation. The results of this study provide valuable guidelines for nitrate-stimulating remediation of sulfide-rich (black-odor) sediments.

The first high resolution PAH record of industrialization over the past 200 years in Liaodong Bay, northeastern China

Polycyclic aromatic hydrocarbons (PAHs) are excellent tracers for fossil fuel combustion, natural fires and petroleum contamination, and have been widely used for reconstructing past wildfires and industrial activities at a variety of time scales. Here, for the first time, we obtain a high resolution (annual to decadal scale) record of PAHs from two parallel marine sediment cores from the Liaodong Bay, Northeastern China to reconstruct the industrial activities, spanning the past ∼ 200 years from 1815 to 2014. Our data indicate that PAH variations can be divided into four episodes: I) low (probably near background) PAHs from natural fires and domestic wood combustion during the pre-industrial period from 1815 to 1890; II) slightly increased (but with large fluctuations) PAH concentrations derived from intermittent warfare during the World War (1891-1945) and increased industrial activities after 1946 (1946-1965); III) a period of stagnation and, in some cases, reduction in PAHs during the "Cultural Revolution" (1966 to 1979); and IV) a rapid and persistent rise in PAHs post 1979 linked to fast economic development, with PAH concentrations doubled from 1979 to 2014. Changes in PAH distributions demonstrate major shifts in the dominant types of fuels over time from vegetation/wood, to coal and wood, followed by coal and petroleum (including vehicle emissions) over the past 200 years. We find that PAH records also show similar trend to domestic economy and the estimated regional Anthropocene CO₂ emissions from industrial activities, suggesting sedimentary PAH fluxes could be used as an indirect and qualitative proxy to track the trend for regional anthropogenic CO₂ emissions.

Engineering Pseudomonas putida To Produce Rhamnolipid Biosurfactants for Promoting Phenanthrene Biodegradation by a Two-Species Microbial Consortium

Polycyclic aromatic hydrocarbons (PAHs) are a group of organic contaminants that pose a significant environmental hazard. Phenanthrene is one of the model compounds for the study of biodegradation of PAHs. However, the biodegradation of phenanthrene is often limited by its low water solubility and dissolution rate. To overcome this limitation, we engineered a strain of Pseudomonas putida to produce rhamnolipid biosurfactants and thereby promote phenanthrene biodegradation by an engineered strain of Escherichia coli constructed previously in our lab. The E. coli-P. putida two-species consortium exhibited a synergistic effect of these two distinct organisms in degrading phenanthrene, resulting in an increase from 61.15 to 73.86% of the degradation ratio of 100 mg/L phenanthrene within 7 days. After additional optimization of the degradation conditions, the phenanthrene degradation ratio was improved to 85.73%. IMPORTANCE Polycyclic aromatic hydrocarbons (PAHs), which are recalcitrant, carcinogenic, and tend to bioaccumulate, are widespread and persistent environmental pollutants. Based on these characteristics, the U.S. Environmental Protection Agency has listed PAHs as priority contaminants. Although there are many methods to treat PAH pollution, these methods are mostly limited by the poor water solubility of PAHs, which is especially true for the biodegradation process. Recent evidence of PAH-contaminated sites suffering from increasingly severe impact has emerged. As a result, the need to degrade PAHs is becoming urgent. The significance of our study lies in the development of nonpathogenic strains of biosurfactant-producing Pseudomonas aeruginosa for promoting the degradation of phenanthrene by engineered Escherichia coli.

Nematodes As Soil Stress Indicators for Polycyclic Aromatic Hydrocarbons: a Review

Polycyclic aromatic hydrocarbons (PAHs) are an important group of organic pollutants present in all parts of the environment, affecting ecosystems and human health. PAHs, which have a strong affinity for organic carbon, are found in large quantities in soil, which is one of the most important sinks for these contaminants. Their impact on the soil biotic compartments depends on a number of different factors in combination with PAH behaviour and can be assessed using soil monitoring. Soil fauna have already shown excellent properties for biomonitoring of contaminants with most promising indicator frameworks based on nematodes, which are involved in essential processes in this environment. Nematodes respond to PAHs at multiple levels, including molecular, individual and community levels. At the molecular level, this is associated with activation of metabolic pathways for xenobiotics and increased demand for energy and resources. At the individual level, this is reflected in the slowing down of various physiological processes, which has consequences at the individual and community level for sensitive taxa. In this review, the toxicity and the direct and indirect effects of PAHs on soil nematode communities are discussed. It also considers the perspectives and challenges in assessing the toxicity of PAHs and their indication using soil nematodes.

Sphingomonas Relies on Chemotaxis to Degrade Polycyclic Aromatic Hydrocarbons and Maintain Dominance in Coking Sites

Polycyclic aromatic hydrocarbons (PAHs) are organic pollutants widely present in industrial sites. Microbial degradation is an effective method of removing PAHs. The identification of microorganisms that have important ecological functions at the site is of great significance for PAH removal. We collected soil samples at three depths in the range of 0–100 cm at 70-day intervals at the coking site and explored the degradation of PAHs. We combined molecular ecology networking, metagenomics, and genome assembly to search for microorganisms that persist, dominate, and affect the microbial community construction in the degradation process and analyzed their adaptation strategies. The results showed that 15.78 mg/kg of PAHs naturally decayed, and 13.33 mg/kg of PAHs migrated from 30–100 cm to 0–30 cm in the soil. Sphingomonas, which occupied a niche advantage, was both the core and keystone microorganism, and its spatial distribution pattern and temporal change dynamics were consistent with those of PAHs. We assembled the genome of Sphingomonas sp., revealing its multiple potential for degrading PAHs and other pollutants. Additionally, flagellar assembly and bacterial chemotaxis genes ranked high in the assembled genome of Sphingomonas sp., which might help it obtain a competitive advantage in the soil. The findings underscored the strategy of Sphingomonas to maintain dominance, enriched the understanding of PAH-degrading microorganisms in site soil, and provided references for the remediation of PAHs.

Cost reduction strategies in the remediation of petroleum hydrocarbon contaminated soil

Petroleum hydrocarbon spill on land pollutes soil and reduces its ecosystem. Hydrocarbon transport in the soil is aided by several biological, physical, and chemical processes. However, pore characteristics play a major role in the distribution within the soil matrix. Restoring land use after spills necessitates remediation using cost-effective technologies. Several remediation technologies have been demonstrated at different scales, and research is ongoing to improve their performances towards the reduction of treatment costs. The process of removing the contaminants in the soil is through one or a combination of containment, separation, and degradation methods under the influence of biological, physical, chemical, and electrically-dominated processes. Generally, performance improvement is achieved through the introduction of products/materials and/or energy. Nevertheless, the technologies can be categorized based on effectiveness period as short, medium, and long term. The treatment cost of short, medium, and long-term technologies are usually in the range of $39 - 331/t (/tonne), $22 - 131/t, and $8 - 131/t, respectively. However, the total cost depends on other factors such as site location, capital cost, and permitting. This review compiles cost-saving strategies reported for different techniques used in remediating petroleum hydrocarbon polluted soil. We discuss the principles of contaminant removal, performance enhancing methods, and the cost-effectiveness analysis of selected technologies.

Negative correlations between cultivable and active-yet-uncultivable pyrene degraders explain the postponed bioaugmentation

Bioaugmentation is an effective approach to remediate soils contaminated by polycyclic aromatic hydrocarbons (PAHs), but suffers from unsatisfactory performance in engineering practices, which is hypothetically explained by the complicated interactions between indigenous microbes and introduced degraders. This study isolated a cultivable pyrene degrader (Sphingomonas sp. YT1005) and an active pyrene degrading consortium (Gp16, Streptomyces, Pseudonocardia, Panacagrimonas, Methylotenera and Nitrospira) by magnetic-nanoparticle mediated isolation (MMI) from soils. Pyrene biodegradation was postponed in bioaugmentation with Sphingomonas sp. YT1005, whilst increased by 30.17% by the active pyrene degrading consortium. Pyrene dioxygenase encoding genes (nidA, nidA3 and PAH-RHDα-GP) were enriched in MMI isolates and positively correlated with pyrene degradation efficiency. Pyrene degradation by Sphingomonas sp. YT1005 only followed the phthalate pathway, whereas both phthalate and salicylate pathways were observed in the active pyrene degrading consortium. The results indicated that the uncultivable pyrene degraders were suitable for bioaugmentation, rather than cultivable Sphingomonas sp. YT1005. The negative correlations between Sphingomonas sp. YT1005 and the active-yet-uncultivable pyrene degraders were the underlying mechanisms of bioaugmentation postpone in engineering practices.

Facile preparation of a novel modified biochar-based supramolecular self-assembled g-C3N4 for enhanced visible light photocatalytic degradation of phenanthrene

The rational design of a novel and environmentally friendly photocatalytic composite for persistent pollutant removal, energy production and catalytic applications have attracted widespread interest. In this study, the new composite composed of KOH-modified biochar and g-C₃N₄ with different morphologies was successfully prepared with facile supramolecular self-assembly and thermal poly-condensation method. The characterization results of the as-prepared composites suggested that KOH-modified biochar had been well combined with g-C₃N₄ with different morphologies. These synthesized catalysts were used to degrade phenanthrene under visible light radiation. A-BC/g-C₃N₄-D performed best and removed 76.72% phenanthrene. Its first-order reaction rate constant was 0.355 h^-1, which was 3.7 times higher than that of g-C₃N₄. A-BC/g-C₃N₄-D still exhibited a high photocatalytic activity after four cycles. Radical quenching results showed that superoxide radical (·O₂^-), hydroxyl radical (·OH) and hole (h⁺) could be used as active species in the redox reaction with phenanthrene. Based on the exploration results of gas chromatography-mass spectrometer (GC-MS), a possible reaction pathway of phenanthrene degradation was also proposed. This study provides a novel strategy for fabricating various high-performance photocatalysts and the removal of persistent organic pollutants.

Environmental impact assessment of the current, emerging, and alternative waste management systems using life cycle assessment tools: a case study of Johannesburg, South Africa

Proper information regarding the performance of waste management systems from an environmental perspective is significant to sustainable waste management decisions and planning toward the selection of the least impactful treatment options. However, little is known about the environmental impacts of the different waste management options in South Africa. This study is therefore aimed at using the life cycle assessment tool to assess the environmental impact of the current, emerging, and alternative waste management systems in South Africa, using the city of Johannesburg as a case study. This assessment involves a comparative analysis of the unit processes of waste management and the different waste management scenarios comprising two or more unit processes from an environmental view. The lifecycle boundary consists of unit processes: waste collection and transportation (WC&T), material recycling facilities (MRF), composting, incineration, and landfilling. Four scenarios developed for the assessment are S1 (WC&T, MRF, and landfilling without energy recovery), S2 (WC&T, MRF, composting, and landfilling with energy recovery), S3 (WC&T and incineration), and S4 (WC&T, MRF, composting, and incineration). Based on the result of this study, MRF is the most environmentally beneficial unit operation while landfill without energy recovery is the most impactful unit operation. The result further revealed that no scenario had the best performance across all the impact categories. However, S3 can be considered as the most environmentally friendly option owing to its lowest impact in most of the impact categories. S3 has the lowest global warming potential (GWP) of 33.19 × 10⁶ kgCO₂eq, ozone depletion potential (ODP) of 0.563 kgCFC-11e, and photochemical ozone depletion potential (PODP) of 679.46 kgC₂H₂eq. Also, S4 can be regarded as the most impactful option owing to its highest contributions to PODP of 1044 kgC₂H₂eq, acidification potential (AP) of 892073.8 kgSO₂eq, and eutrophication potential (EP) of 51292.98 MaxPO4^-3eq. The result of this study will be found helpful in creating a complete impression of the environmental performance of waste management systems in Johannesburg, South Africa which will aid sustainable planning and decisions by the concerned sector.

Biochar-assisted Fenton-like oxidation of benzo[a]pyrene-contaminated soil

In the present study, the biochar derived from sunflower husks was used as a mediator in the heterogeneous Fenton process. The physical and chemical characteristics were studied in terms of specific surface area, elemental contents, surface morphology, surface functional groups, thermal stability, and X-ray crystallography. The main aim was to evaluate the effectiveness of biochar in a heterogeneous Fenton process catalyzed by hematite toward the degradation of benzo[a]pyrene (BaP) in Haplic Chernozem. The Fenton-like reaction was performed at a pH of 7.8 without pH adjustment in chernozem soil. The effects of operating parameters, such as hematite dosage and H₂O₂ concentrations, were investigated with respect to the removal efficiency of BaP. The overall degradation of 65% was observed at the optimized conditions where 2 mg g^-1 hematite and 1.25 M H₂O₂ corresponded to the H₂O₂ to Fe ratio of 22:1. Moreover, the biochar amendment showed an increment in the removal efficiency and promotion in the growth of spring barley (Hordeum sativum distichum). The BaP removal was reached 75 and 95% after 2.5 and 5% w/w addition of biochar, respectively. The results suggested that the Fenton-like reaction's effectiveness would be greatly enhanced by the ability of biochar for activation of H₂O₂ and ejection of the electron to reduce Fe(III) to Fe(II). Finally, the presence of biochar could enhance the soil physicochemical properties, as evidenced by the better growth of Hordeum sativum distichum compared to the soil without biochar. These promising results open up new opportunities toward the application of a modified Fenton reaction with biochar for remediating BaP-polluted soils.

Binding interaction of a ring-hydroxylating dioxygenase with fluoranthene in Pseudomonas aeruginosa DN1

Pseudomonas aeruginosa DN1 can efficiently utilize fluoranthene as its sole carbon source, and the initial reaction in the biodegradation process is catalyzed by a ring-hydroxylating dioxygenase (RHD). To clarify the binding interaction of RHD with fluoranthene in the strain DN1, the genes encoding alpha subunit (RS30940) and beta subunit (RS05115) of RHD were functionally characterized through multi-technique combination such as gene knockout and homology modeling as well as molecular docking analysis. The results showed that the mutants lacking the characteristic alpha subunit and/or beta subunit failed to degrade fluoranthene effectively. Based on the translated protein sequence and Ramachandran plot, 96.5% of the primary amino-acid sequences of the alpha subunit in the modeled structure of the RHD were in the permitted region, 2.3% in the allowed region, but 1.2% in the disallowed area. The catalytic mechanism mediated by key residues was proposed by the simulations of molecular docking, wherein the active site of alpha subunit constituted a triangle structure of the mononuclear iron atom and the two oxygen atoms coupled with the predicted catalytic ternary of His₂₁₇-His₂₂₂-Asp₃₇₂ for the dihydroxylation reaction with fluoranthene. Those amino acid residues adjacent to fluoranthene were nonpolar groups, and the C₇-C₈ positions on the fluoranthene ring were estimated to be the best oxidation sites. The distance of C₇-O and C₈-O was 3.77 Å and 3.04 Å respectively, and both of them were parallel. The results of synchronous fluorescence and site-directed mutagenesis confirmed the roles of the predicted residues during catalysis. This binding interaction could enhance our understanding of the catalytic mechanism of RHDs and provide a solid foundation for further enzymatic modification.

Remediation of soils and sediments polluted with polycyclic aromatic hydrocarbons: To immobilize, mobilize, or degrade?

Polycyclic aromatic hydrocarbons (PAHs) are generated due to incomplete burning of organic substances. Use of fossil fuels is the primary anthropogenic cause of PAHs emission in natural settings. Although several PAH compounds exist in the natural environmental setting, only 16 of these compounds are considered priority pollutants. PAHs imposes several health impacts on humans and other living organisms due to their carcinogenic, mutagenic, or teratogenic properties. The specific characteristics of PAHs, such as their high hydrophobicity and low water solubility, influence their active adsorption onto soils and sediments, affecting their bioavailability and subsequent degradation. Therefore, this review first discusses various sources of PAHs, including source identification techniques, bioavailability, and interactions of PAHs with soils and sediments. Then this review addresses the remediation technologies adopted so far of PAHs in soils and sediments using immobilization techniques (capping, stabilization, dredging, and excavation), mobilization techniques (thermal desorption, washing, electrokinetics, and surfactant assisted), and biological degradation techniques. The pros and cons of each technology are discussed. A detailed systematic compilation of eco-friendly approaches used to degrade PAHs, such as phytoremediation, microbial remediation, and emerging hybrid or integrated technologies are reviewed along with case studies and provided prospects for future research.

Soil concentrations, compositional profiles, sources and bioavailability of polychlorinated dibenzo dioxins/furans, polychlorinated biphenyls and polycyclic aromatic hydrocarbons in open municipal dumpsites of Chennai city, India

Several studies have reported the release of halogenated persistent organic pollutants (POPs) and polycyclic aromatic hydrocarbons (PAHs) associated with open burning of municipal solid waste. Considering soil as a sink for such organic contaminants, we conducted an in-depth study on the surface soil concentrations of polychlorinated dibenzo-p-dioxins/furans (PCDD/Fs), polychlorinated biphenyls (PCBs) and sixteen USEPA enlisted PAHs collected from thirteen zones of the two major municipal dumpsites, Kodungaiyur dumpsite (KDS) and Perungudi dumpsite (PDS) of Chennai city. Indigenous microbes from dumpsite soil samples were isolated and identified based on 16S rRNA sequencing and phylogenetic analysis. Using indigenous microbes, we have elucidated the bioavailability of the targeted organic pollutants for each site.Range of Σ₁₇PCDD/Fs, Σ₂₅PCBs and ∑₁₆PAHs varied between 3.96-612 pg/g (96.0 pg/g; median), ND-182 ng/g (6.35 ng/g; median) and 0.62-3649 ng/g (64.3 ng/g; median), respectively. All the dumpsite samples showed bioavailability for POPs and PAHs. Toxicity equivalent values (TEQs) associated with dioxin-like PCBs and PCDD/Fs from the zones where dumped municipal solid wastes were collected from electronic-waste/IT-corridor/port areas and toxic PAHs from the zone receiving wastes from the industrial corridor of the city were higher than the soil permissible limit prescribed by the World Health Organization.

Targeting the right parameters in PAH remediation studies

Contaminated land burdens the economy of many countries and must be dealt with. Researchers have published thousands of documents studying and developing soil and sediment remediation treatments. Amongst the targeted pollutants are the polycyclic aromatic hydrocarbons (PAHs), described as a class of persistent organic compounds, potentially harmful to ecosystems and living organisms. The present paper reviews and discusses three scientific trends that are leading current PAH-contaminated soil/sediment remediation studies and management. First, the choice of compounds that are being studied and targeted in the scientific literature is discussed, and we suggest that the classical 16 US-EPA PAH compounds might no longer be sufficient to meet current environmental challenges. Second, we discuss the choice of experimental material in remediation studies. Using bibliometric measures, we show the lack of PAH remediation trials based on co-contaminated or aged-contaminated material. Finally, the systematic use of the recently validated bioavailability measurement protocol (ISO/TS 16751) in remediation trials is discussed, and we suggest it should be implemented as a tool to improve remediation processes and management strategies.

Effect of nanomaterials on remediation of polycyclic aromatic hydrocarbons-contaminated soils: A review

The remediation of toxic polycyclic aromatic hydrocarbons (PAHs) in the soil is always an important topic since exposure to contaminated soil with carcinogenic, mutagenic, and teratogenic potential can result in serious health effects. With respect to the remediation of PAHs contaminated soil, nanomaterials (NMs) have recently received a great deal of attention due to the special characteristics arising from their nanoscale sizes. However, the usefulness and potency of these NMs depend on their adaption to specific site conditions and soil properties. Since there is no comprehensive review of the applications of NMs, it is of great importance to analyze, discuss, and interpret the latest progress in the application of NMs for the remediation of contaminated soils containing PAHs. This overview essentially captures the novel advances made in nano zero valent-iron (nZVI), metal oxides, carbon-based NMs, and polymer-based materials. Each characteristic of NMs that contributes to the enhancement of the process is highlighted. Moreover, operational conditions in which the best-obtained results are achieved qualitatively summarize. This review is also given special attention to the type of soil and pollutant, which are major influential factors to affect the performance of the process. Furthermore, the potential implication of NMs and PAHs on soil properties is reviewed in terms of the changes in migration behavior of pollutants, plant phytotoxicity, and soil microbial community composition. Discussion on future perspectives is presented on the use and prospects for the application of NMs in contaminated soils.

Advances in water treatment technologies for removal of polycyclic aromatic hydrocarbons: Existing concepts, emerging trends, and future prospects

In the last two decades, environmental experts have focused on the development of several biological, chemical, physical, and thermal methods/technologies for remediation of PAH-polluted water. Some of the findings have been applied to field-scale treatment, while others have remained as prototypes and semi-pilot studies. Existing treatment options include extraction, chemical oxidation, bioremediation, photocatalytic degradation, and adsorption (employing adsorbents such as biomass derivatives, geosorbents, zeolites, mesoporous silica, polymers, nanocomposites, and graphene-based materials). Electrokinetic remediation, advanced phytoremediation, green nanoremediation, enhanced remediation using biocatalysts, and integrated approaches are still at the developmental stage and hold great potential. Water is an essential component of the ecosystem and highly susceptible to PAH contamination due to crude oil exploration and spillage, and improper municipal and industrial waste management, yet comprehensive reviews on PAH remediation are only available for contaminated soils, despite the several treatment methods developed for the remediation of PAH-polluted water. This review seeks to provide a comprehensive overview of existing and emerging methods/technologies, in order to bridge information gaps toward ensuring a green and sustainable remedial approach for PAH-contaminated aqueous systems. PRACTITIONER POINTS: Comprehensive review of existing and emerging technologies for remediation of PAH-polluted water. Factors influencing efficiency of various methods, challenges and merits were discussed. Green nano-adsorbents, nano-oxidants and bio/phytoremediation are desirous for ecofriendly and economical PAH remediation. Adoption of an integrated approach for the efficient and sustainable remediation of PAH-contaminated water is recommended.

Rhizosphere assisted bioengineering approaches for the mitigation of petroleum hydrocarbons contamination in soil

The high demand for petroleum oil has led to hydrocarbon contamination in soil, including agricultural lands, and many other ecosystems across the globe. Physical and chemical treatments are effective strategies for the removal of high contamination levels and are useful for small areas, although with concerns of cost-effectiveness. Alternatively, several bacteria belonging to the Phylum: Proteobacteria, Bacteroidetes, Actinobacteria, Nocardioides, or Firmicutes are used for biodegradation of different hydrocarbons - aliphatic, polyaromatic hydrocarbons (PAH), and asphaltenes in the oil-contaminated soil. The rhizoremediation strategy with plant-microbe interactions has prospects to achieve the desired result in the field conditions. However, adequate biostimulation, and bioaugmentation with the suitable plant-microbe combination, and efficiency under a toxic environment needs to be evaluated. Modifying the microbiomes to achieve better biodegradation of contaminants is an upcoming strategy popularly known as microbiome engineering. In this review, rhizoremediation for the successful removal of the hydrocarbons have been critically discussed, with challenges for making it a feasible technology.HIGHLIGHTSPetroleum hydrocarbon contamination has increased around the globe.Rhizoremediation has the potential for the mitigation of pollutants from the contaminated sites.An accurate and detailed analysis of the physio-chemical and climatic conditions of the contaminated sites must be focused on.The suitable plant and bacteria, with other major considerations, may be employed for in-situ remediation.The appropriate data should be obtained using the omics approach to help toward the success of the rhizoremediation strategy.

Glomalin-related soil protein reduces the sorption of polycyclic aromatic hydrocarbons by soils

Large amounts of glomalin-related soil protein (GRSP) are present in the soil; however, the impacts of GRSP on the chemical process of soil polycyclic aromatic hydrocarbons (PAHs) are far under investigation. This research sought to elucidate the sorption of phenanthrene as a representative PAH by soils, including Kandiudult, TypicPaleudalf, and Mollisols with co-existing GRSP (0-50 mg/L). The results indicated that soil sorption capacities for phenanthrene reduced significantly. Notably, GRSP changed the sorption process of phenanthrene by Kandiudult, well described as the Freundlich model. In contrast, the phenanthrene sorption isotherms were well described with the Linear model for TypicPaleudalf and Mollisols. The reduced percentage of phenanthrene sorption due to GRSP addition was 7.01%-49.21%, 23.92%-68.71%, and17.26%-66.80% for Kandiudult, TypicPaleudalf and Mollisols, respectively. It was noted that GRSP has a strong capacity for phenanthrene sorption in aqueous solutions and elevates the availability of phenanthrene for microorganisms or plants. During the sorption process, the introduction of GRSP resulted in the reduction of organic matter in soils and elevated the concentrations of dissolved organic matter in solutions, which was the primary mechanism of GRSP-reduced phenanthrene sorption by soils. The findings revealed that GRSP enrichment can increase the mobility of PAHs in contaminated soils.

Acute effects of PAH contamination on microbial community of different forest soils

Polycyclic aromatic hydrocarbons (PAHs) are hazardous organic compounds with mutagenic, genotoxic and carcinogenic properties. Although PAHs in soil can cause toxicity to microorganisms, the microbial community is able to degrade these compounds. For this reason, it is important to study acute and short-term effects of PAH contamination on soil microbial community, also to shed light on its possible exploitation in soil restoration. The effects of acute PAH contamination on the structure and metabolic activity of microbial communities in three forest (beech, holm oak, black pine) soils were studied. The soils were spiked with phenanthrene, pyrene or benzo[a]pyrene and incubated in experimental mesocosms, under controlled conditions. Enzymatic activities (laccase, total peroxidase and hydrolase), as well as microbial biomass and community structure (through phospholipid fatty acid and ergosterol analyses), were evaluated in the three soil systems 4 days after contamination and compared to no-spiked soils. In soil under holm oak, there was a stimulation of Gram+ bacteria after contamination with all the 3 PAHs, whereas in soil under pine, pyrene and phenanthrene additions mainly stimulated fungi and actinomycetes.

Interactions of PAH-degradation and nitrate-/sulfate-reducing assemblages in anaerobic sediment microbial community

Nitrate and sulfate are electron acceptors (EAs) for biodegradation of polycyclic aromatic hydrocarbons (PAHs) in anaerobic sediments. The efficiency of PAHs biodegradation depends on the strength of the interactions between PAH-degradation and EA-reduction assemblages. However, these interactions are less studied. In this study, microbial response and PAH degradation efficiencies in river sediment were investigated using nitrate and sulfate stimulation. Results showed that the functional assemblages (PAH-degraders, nitrate- and sulfate- reducers) were low connectivity in the microbial network without EA adding. Nitrate input rapidly (<1 day) raised the nitrate reduction intensity. And the PAH-degraders and nitrate reducers established significant and direct correlations under nitrate stimulation, seen from the 13 connectors (nodes) in the microbial network. In contrast, sulfate reducers slowly increased in abundance (>20 days) and were connected to PAH-degraders through indirect connection under sulfate stimulation. The null model suggested that nitrate led to a higher level of directional selection, which implied that nitrate was a more favorable EA to trigger the deterministic succession. As a result, PAHs degradation was faster with nitrate stimulation (t_1/2 = 68.3 d) than with sulfate stimulation (t_1/2 = 164.6 d). These mechanistic understandings can serve as the guidelines for EA selection in bioremediation.

Acinetobacter sp. as the key player in diesel oil degrading community exposed to PAHs and heavy metals

The aim of this study was to verify the hypothesis that a hydrocarbon degrading community isolated from a site heavily polluted with polycyclic aromatic hydrocarbons (PAHs) and heavy metals should exhibit a high activity and biodegradation efficiency, despite decreased biodiversity resulting from the presence of such contaminants. Microbial community isolated from soil collected at an abandoned creosote railway wood-sleepers impregnation plant using diesel oil was used during the studies. Four parallel systems spiked with diesel oil, diesel oil + PAHs, diesel oil + heavy metals and diesel oil + PAHs + heavy metals were analysed in terms of relative abundance and biodiversity of the microbial community (Illumina), biodegradation efficiency (GCMS) and cellular metabolic activity (flow cytometry). Principal Component Analysis and biodiversity parameters indicated that the mixture of PAHs and heavy metals was the dominant factor which resulted in the enrichment of the Gammaproteobacteria class. This was associated with higher degradation of additional PAHs in the presence of heavy metals and an increase of metabolically active sub-populations during flow cytometry analysis. The increased abundance of the Acinetobacter genus in systems with both PAHs and heavy metals implies that it may play a crucial role in soil populations exposed to mixed contaminations.

Chemical characterization and phytotoxicity assessment of peri-urban soils using seed germination and root elongation tests

The peri-urban soil is exposed to pollutants because of its proximity to the city, which may influence the quality of agricultural products. In this study, the occurrence of 16 trace elements (TEs), 16 polycyclic aromatic hydrocarbons (PAHs), and 33 contaminants of emerging concern (CECs) was analyzed in two soil sites of the peri-urban area of Barcelona (Spain) (S2 and S3) and a pristine site (S1). Levels of Pb (S2 164 and S3 150 mg kg-1) are around 2.5 times higher than the guideline values. Values for Cu (178 mg kg-1) in S2 are 1.8-fold higher, whereas for Zn, levels are slightly above the threshold in S2 (208 mg kg-1) and S3 (217 mg kg-1). The total concentrations of PAHs are significantly below the limits: 24 ng g-1 dw (S1), 38 ng g-1 dw (S2), 49 ng g-1 dw (S3), whereas only some CECs are detected with low concentrations. We also developed a simple and rapid method to assess soil pollution. Here, we use two plant growth indexes (seed germination rate and root elongation at the initial stage) of three seeds (lettuce, tomato, and cauliflower) to assess soil chemical contamination on agriculture. In the peri-urban soil, the concentration of Pb was 2.5 times higher than the guideline values, whereas for Cu and Zn, values were slightly above their limits, while only few PAHs and CECs were detected. Results for principal component analysis suggest that root elongation is a more sensitive measurement endpoint than germination rate, especially for lettuce. The germination rate of tomato relied on the nitrate in the soil and decreased sharply in the site with pollution of Cu and As. Under the specific conditions of this study, cauliflower should not be recommended to assess environmental pollution due to its low sensitivity to pollutants. In conclusion, this is a low-cost, simple, and rapid method for evaluating the effects of chemical pollution of agriculture soils on seed growth.

Low potential enzymatic hydride transfer via highly cooperative and inversely functionalized flavin cofactors

Hydride transfers play a crucial role in a multitude of biological redox reactions and are mediated by flavin, deazaflavin or nicotinamide adenine dinucleotide cofactors at standard redox potentials ranging from 0 to –340 mV. 2-Naphthoyl-CoA reductase, a key enzyme of oxygen-independent bacterial naphthalene degradation, uses a low-potential one-electron donor for the two-electron dearomatization of its substrate below the redox limit of known biological hydride transfer processes at E°’ = −493 mV. Here we demonstrate by X-ray structural analyses, QM/MM computational studies, and multiple spectroscopy/activity based titrations that highly cooperative electron transfer (n = 3) from a low-potential one-electron (FAD) to a two-electron (FMN) transferring flavin cofactor is the key to overcome the resonance stabilized aromatic system by hydride transfer in a highly hydrophobic pocket. The results evidence how the protein environment inversely functionalizes two flavins to switch from low-potential one-electron to hydride transfer at the thermodynamic limit of flavin redox chemistry.

The reduction of 2-naphtoyl-CoA to 5,6 dihydro-2-naphtoyl-CoA by 2-naphtoyl-CoA reductase is below the negative redox limit usually encountered in biological hydride transfer. Here, via X-ray crystallography and spectroscopic analysis, the authors elucidated the mechanism behind this.

Biochar as An Effective Material on Sediment Remediation for Polycyclic Aromatic Hydrocarbons Contamination

The mechanism of biochar as capping materials on polycyclic aromatic hydrocarbons (PAHs) removal in river sediments was investigated. When biochar was amended, pyrene was decreased through strengthened aging effects (1.6 times), which was attributed to high adsorption capacity of the biochar. While biochar did not alter the main microbial community, it provided a stable niche for PAHs degradation microorganisms, which attributed to the porosity and biological affinity of biochar. According to the results, biochar increased the opportunity for PAH-degraders to contact PAHs in sediments. When electron acceptors were available, the pyrene-degraders in biochar pore degraded the adsorbed pyrene rapidly (+103%). Therefore, biochar could be an effective material on PAHs removal in sediments.

Removal of polycyclic aromatic hydrocarbons from different soil fractions by persulfate oxidation

Removal of polycyclic aromatic hydrocarbons (PAHs) from different soil fractions of contaminated soil was investigated by using activated persulfate oxidation remediation in our research. The results showed that the light fraction, which accounted for only 10% of the soil, contained 30% of the PAHs at a concentration of 4352 mg/kg. The heavy fraction contained more high-molecular-weight PAHs, and the total PAH concentration was 625 mg/kg. After being oxidized, the removal rate of PAHs was 39% in the light fraction and nearly 90% in the heavy fraction. Among the different fractions of the heavy fraction, humic acid contained the highest concentration of PAHs, and consequently, the highest removal efficiency of PAHs was also in humic acid. Compared with the light fraction, the heavy fraction has more aromatic compounds and those compounds were broken down during the oxidation process, which may be the removal mechanism involved in the oxidation of high-ring PAHs. Similarly, the enhancement of C=C bonds after oxidation can also explain the poor removal of high-ring PAHs in the light fraction. These results imply that different fractions of soil vary in composition and structure, leading to differences in the distribution and oxidation efficiencies of PAHs.

A method for assessing carcinogenic risk of air fine particle-associated polycyclic aromatic hydrocarbons by considering bioaccessibility in lung fluids

This study was conducted to evaluate the inhalation carcinogenic risk of PAHs in biochar fine particles using total concentration-based assessment approach and bioaccessibility-based assessment approach. Only limit PAHs in particles can be released in simulated lung fluids, leading to a low bioaccessibility (only ranging from 0.34% to 1.48% for biochar fine particles and from 3.21% to 44.2% for PM2.5), which would significantly affect health risk assessment. Therefore, bioaccessibility should always be favored over more traditional evaluations based on total concentration, while evaluating inhalation health risks of biochar-bound PAHs. To prove the broad applicability of bioaccessibility-based assessment approaches, we also compared health risk of actual atmospheric particles (PM2.5 collected from Nanjing, China) using total concentration-based approaches and bioaccessibility-based approaches. •Proposed bioaccessibility-based approaches for assessing biochar risk are more accurate than traditional total concentration-based approaches;•Proposed bioaccessibility-based approaches can be applied to health risk assessment of actual air particles;•A more practical method was proposed to evaluate the bioaccessibility of PAHs in biochar fine particles or other specific component of atmospheric particle matters: using wet sieving method to prepare fine particles, using volatile organic solvent-drying method to load 14C-PAHs on fine particles, and using desorption experiments to determine bioaccessibility of PAHs.

Effect of Tenax addition amount and desorption time on desorption behaviour for bioavailability prediction of polycyclic aromatic hydrocarbons

In this work, Tenax consecutive extractions of polycyclic aromatic hydrocarbons (PAHs) were conducted in two spiked sediments to investigate the influence of different Tenax addition amounts and desorption times on the rapidly desorbing fraction of PAHs, and to determine a reliable method for estimating PAHs bioavailability. The results indicated that a large Tenax addition amount has a positive effect on the desorption of PAHs from sediments. The desorption amounts of target PAHs compounds (3-ring phenanthrene and 4-ring fluoranthene) increased as the Tenax: sediment ratios increased from 0.25 to 2 in two spiked sediments. The highest desorption percentages of phenanthrene and fluoranthene were 48.91% and 34.70% for Jialing industrial park sediment, and 43.36% and 33.24% for Huanghuayuan bridge sediment, respectively. The results of desorption kinetics were suitably fitted with first order three-compartment model to estimate the rapidly desorbing fraction, Moreover, the Tenax: sediment ratio of 1 and desorption time of 24 h were found to be suitable for the desorption of phenanthrene and fluoranthene from sediments. The PAHs in sediments were biodegraded well by the bacterial strain J1-q. Comparing the maximum biodegraded amount of target PAHs in 30 days and the desorbed fraction over 400 h, the results showed that Tenax had better correlation with the high molecular weight fluoranthene than with the low molecular weight phenanthrene.

The combined effects of surfactant solubilization and chemical oxidation on the removal of polycyclic aromatic hydrocarbon from soil

A method for the remediation of polycyclic aromatic hydrocarbons (PAHs) contaminated soils was proposed involving a combination of surfactant-aided soil washing and chemical oxidation by activated persulfate (SP). In this study, Triton X-100 (TX-100) and SP was applied to the soil, either concurrently or sequentially. Results indicated that surfactant followed by amendment with a solution of SP, TX-100 + SP(l), was most effective in decreasing PAHs concentrations in a sandy loam soil (SS) and a silty clay soil (NS) from 1220 mg/kg and 2730 mg·kg^-1 to 414 mg·kg^-1 and 180 mg·kg^-1, respectively. Compared with extraction alone and oxidation alone, TX-100 + SP(l) increased the removal of PAHs by 10-20%. TX-100 improved the degradation of 3-4 ring PAHs (M-PAHs) and 5-6 ring PAHs (H-PAHs) in SS, by approximately 8%-11%. The oxygenated polycyclic aromatic hydrocarbons (oxy-PAHs) including furans and xanthene exhibited greater reductions in soil when amended with the TX-100 and SP, than under TX-100 extraction or SP oxidation alone. Overall, increased removal of PAHs in contaminated soil can occur through simultaneous application of TX-100 and SP, relative to the sole use of TX-100 or SP. The sequential combination of surfactant and oxidant was most effective for the elimination of PAHs, especially for M-PAHs and H-PAHs in sandy loam contaminated soil.

Enhanced Recovery of Nonextractable Benzo[ a]pyrene Residues in Contrasting Soils Using Exhaustive Methanolic and Nonmethanolic Alkaline Treatments

The fate, impacts, and significance of polycyclic aromatic hydrocarbon (PAH) nonextractable residues (NERs) in soils remain largely unexplored in risk-based contaminated land management. In this study, seven different methanolic and nonmethanolic alkaline treatments, and the conventional methanolic saponification, were used to extract benzo[ a]pyrene (B[ a]P) NERs that had been aged for 180 d from four contrasting soils. Up to 16% and 55% of the amount of B[ a]P spiked (50 mg/kg) into soils was nonextractable after 2 d and 180 of aging, respectively, indicating rapid and progressive B[ a]P sequestration in soils over time. The recovery of B[ a]P from soils after 180 d of aging was increased by up to 48% by the seven different alkaline extractions, although the extraction efficiencies of the different alkaline treatments did not differ significantly ( p > 0.05). Approximately 40% of B[ a]P NERs in the sandy-clay-loam organic matter-rich soil was recovered by the exhaustive alkaline extractions after 180 d of aging, compared to only 10% using conventional methanolic saponification. However, the amounts of B[ a]P NERs recovered depend on soil properties and the amounts of NERs in soils. A significant correlation ( R² = 0.69, p < 0.001) was also observed between the amounts of B[ a]P recovered by each of the seven alkaline extractions in the contrasting soils and corresponding NERs at 180 d of aging, indicating a potential association warranting further investigations. Extraction techniques that estimate the amounts of PAH NERs recoverable in soil can help give a better understanding of the fate of NERs in soil.