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Jia T, Gu J, Ma M. La (NO 3) 3 substantially fortified Glycyrrhiza uralensis's resilience against salt stress by interconnected pathways. BMC PLANT BIOLOGY 2024; 24:926. [PMID: 39367329 PMCID: PMC11452937 DOI: 10.1186/s12870-024-05644-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2024] [Accepted: 09/27/2024] [Indexed: 10/06/2024]
Abstract
The taproot of Glycyrrhiza uralensis is globally appreciated for its medicinal and commercial value and is one of the most popular medicinal plants. With the decline of wild G. uralensis resources, cultivated G. uralensis has become a key method to ensure supply. However, soil salinization poses challenges to G. uralensis cultivation and affects the yield and quality of it. In this study, the inhibitory effects of NaCl and Na2SO4 on yield and quality of G. uralensis were comprehensively evaluated in a three-year large-scale pot experiment, and the alleviating effects of supplementation with lanthanum nitrate (La (NO3)3) on G. uralensis were further evaluated under salt stress. The findings indicate that La (NO3)3 significantly strengthened the plant's salt tolerance by enhancing photosynthetic capacity, osmolyte accumulation, antioxidant defenses, and cellular balance of ions, which led to a substantial increase in root biomass and accumulation of major medicinal components. In comparison to the NaCl-stress treatment, the 0.75 M La (NO3)3 + NaCl treatment resulted in a 20% and 34% increase in taproot length and biomass, respectively, alongside a 52% and 43% rise in glycyrrhizic acid and glycyrrhizin content, respectively. Similar improvements were observed with 0.75 M La (NO3)3 + Na2SO4 treatment, which increased root length and biomass by 14% and 26%, respectively, and glycyrrhizic acid and glycyrrhizin content by 40% and 38%, respectively. The combined showed that application of La (NO3)3 not only significantly improved the salt resilience of G. uralensis, but also had a more pronounced alleviation of growth inhibition induced by NaCl compared to Na2SO4 stress except in the gas exchange parameters and root growth. This study provides a scientific basis for high-yield and high-quality cultivation of G. uralensis in saline soils and a new approach for other medicinal plants to improve their salt tolerance.
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Affiliation(s)
- Tingting Jia
- College of Life Sciences, Shihezi University, Shihezi, Xinjiang, 832003, The People's Republic of China
| | - Junjun Gu
- College of Life Sciences, Shihezi University, Shihezi, Xinjiang, 832003, The People's Republic of China
| | - Miao Ma
- College of Life Sciences, Shihezi University, Shihezi, Xinjiang, 832003, The People's Republic of China.
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2
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Graça AT, Lihavainen J, Hussein R, Schröder WP. Obscurity of chlorophyll tails - Is chlorophyll with farnesyl tail incorporated into PSII complexes? PHYSIOLOGIA PLANTARUM 2024; 176:e14428. [PMID: 38981693 DOI: 10.1111/ppl.14428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2024] [Revised: 06/14/2024] [Accepted: 06/20/2024] [Indexed: 07/11/2024]
Abstract
Chlorophyll is essential in photosynthesis, converting sunlight into chemical energy in plants, algae, and certain bacteria. Its structure, featuring a porphyrin ring enclosing a central magnesium ion, varies in forms like chlorophyll a, b, c, d, and f, allowing light absorption at a broader spectrum. With a 20-carbon phytyl tail (except for chlorophyll c), chlorophyll is anchored to proteins. Previous findings suggested the presence of chlorophyll with a modified farnesyl tail in thermophilic cyanobacteria Thermosynechoccocus vestitus. In our Arabidopsis thaliana PSII cryo-EM map, specific chlorophylls showed incomplete phytyl tails, suggesting potential farnesyl modifications. However, further high-resolution mass spectrometry (HRMS) analysis in A. thaliana and T. vestitus did not confirm the presence of any farnesyl tails. Instead, we propose the truncated tails in PSII models may result from binding pocket flexibility rather than actual modifications.
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Affiliation(s)
- André T Graça
- Department of Chemistry, Umeå University, Umeå, Sweden
| | - Jenna Lihavainen
- Department of Plant Physiology, Umeå Plant Science Centre (UPSC), Umeå University, Umeå, Sweden
| | - Rana Hussein
- Humboldt-Universität zu Berlin, Department of Biology, Berlin, Germany
| | - Wolfgang P Schröder
- Department of Chemistry, Umeå University, Umeå, Sweden
- Department of Plant Physiology, Umeå Plant Science Centre (UPSC), Umeå University, Umeå, Sweden
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3
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Sarngadharan P, Holtkamp Y, Kleinekathöfer U. Protein Effects on the Excitation Energies and Exciton Dynamics of the CP24 Antenna Complex. J Phys Chem B 2024; 128:5201-5217. [PMID: 38756003 PMCID: PMC11145653 DOI: 10.1021/acs.jpcb.4c01637] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2024] [Revised: 04/29/2024] [Accepted: 05/06/2024] [Indexed: 05/18/2024]
Abstract
In this study, the site energy fluctuations, energy transfer dynamics, and some spectroscopic properties of the minor light-harvesting complex CP24 in a membrane environment were determined. For this purpose, a 3 μs-long classical molecular dynamics simulation was performed for the CP24 complex. Furthermore, using the density functional tight binding/molecular mechanics molecular dynamics (DFTB/MM MD) approach, we performed excited state calculations for the chlorophyll a and chlorophyll b molecules in the complex starting from five different positions of the MD trajectory. During the extended simulations, we observed variations in the site energies of the different sets as a result of the fluctuating protein environment. In particular, a water coordination to Chl-b 608 occurred only after about 1 μs in the simulations, demonstrating dynamic changes in the environment of this pigment. From the classical and the DFTB/MM MD simulations, spectral densities and the (time-dependent) Hamiltonian of the complex were determined. Based on these results, three independent strongly coupled chlorophyll clusters were revealed within the complex. In addition, absorption and fluorescence spectra were determined together with the exciton relaxation dynamics, which reasonably well agrees with experimental time scales.
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Affiliation(s)
- Pooja Sarngadharan
- School of Science, Constructor
University, Campus Ring
1, 28759 Bremen, Germany
| | - Yannick Holtkamp
- School of Science, Constructor
University, Campus Ring
1, 28759 Bremen, Germany
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4
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Singh P, Jaiswal S, Tripathi DK, Singh VP. Nitric oxide acts upstream of indole-3-acetic acid in ameliorating arsenate stress in tomato seedlings. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 208:108461. [PMID: 38461754 DOI: 10.1016/j.plaphy.2024.108461] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/29/2023] [Revised: 01/24/2024] [Accepted: 02/21/2024] [Indexed: 03/12/2024]
Abstract
After their discovery, nitric oxide (NO) and indole-3-acetic acid (IAA) have been reported as game-changing cellular messengers for reducing abiotic stresses in plants. But, information regarding their shared signaling in regulating metal stress is still unclear. Herein, we have investigated about the joint role of NO and IAA in mitigation of arsenate [As(V)] toxicity in tomato seedlings. Arsenate being a toxic metalloid increases the NPQ level and cell death while decreasing the biomass accumulation, photosynthetic pigments, chlorophyll a fluorescence, endogenous NO content in tomato seedlings. However, application of IAA or SNP to the As(V) stressed seedlings improved growth together with less accumulation of arsenic and thus, preventing cell death. Interestingly, addition of c-PTIO, {2-(4-carboxyphenyl)-4, 4, 5, 5-tetramethylimidazoline-1-oxyl-3-oxide, a scavenger of NO} and 2, 3, 5-triidobenzoic acid (TIBA, an inhibitor of polar auxin transport) further increased cell death and inhibited activity of GST, leading to As(V) toxicity. However, addition of IAA to SNP and TIBA treated seedlings reversed the effect of TIBA resulting into decreased As(V) toxicity. These findings demonstrate that IAA plays a crucial and advantageous function in NO-mediated reduction of As(V) toxicity in seedlings of tomato. Overall, this study concluded that IAA might be acting as a downstream signal for NO-mediated reduction of As(V) toxicity in tomato seedlings.
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Affiliation(s)
- Pooja Singh
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, A Constituent Post Graduate College of University of Allahabad, Prayagraj, 211002, India
| | - Saumya Jaiswal
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, A Constituent Post Graduate College of University of Allahabad, Prayagraj, 211002, India
| | - Durgesh Kumar Tripathi
- Crop Nanobiology and Molecular Stress Physiology Lab Amity Institute of Organic Agriculture, Amity University Uttar Pradesh, Sector-125, Noida, 201313, India
| | - Vijay Pratap Singh
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, A Constituent Post Graduate College of University of Allahabad, Prayagraj, 211002, India.
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5
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Szafraniec MJ. Interactions of chlorophyll-derived photosensitizers with human serum albumin are determined by the central metal ion. J Biomol Struct Dyn 2023; 41:479-492. [PMID: 34844514 DOI: 10.1080/07391102.2021.2007794] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Two structurally similar derivatives of chlorophyll a, chlorophyllide a (Chlide) and zinc-pheophorbide a (Zn-Pheide), differing only in central metal ion (Mg2+ or Zn2+, respectively) substituting the tetrapyrrole ring, were investigated with regard to their binding to human serum albumin (HSA). Chlide and Zn-Pheide are very promising photosensitizers with potential application in photodynamic therapy, therefore it is desirable to investigate their interactions with serum proteins. The studies included absorption and steady-state fluorescence spectroscopy, as well as molecular docking. It was found that both investigated compounds form complexes with HSA. Experimental data revealed two classes of binding sites for each compound. The affinities (Ka) for the first class were in the range of 105 and 106 M-1 for Chlide and Zn-Pheide, respectively, while the second class was characterized by the affinities of the order of 104 M-1 for both derivatives. Molecular docking simulations together with displacement studies revealed that the primary binding site of the studied compounds is the heme site, localized in the subdomain IB, however the best characterized binding sites of HSA, namely the Sudlow's sites I and II are also involved. The interactions between the derivatives of chlorophyll and HSA were found to be predominantly hydrophobic and to a lesser extent hydrogen bonding. Our results demonstrate that the centrally bound metal ion determines both the affinity and mode of binding to HSA, which may be a feature differentiating these compounds in terms of their pharmacokinetics.Communicated by Ramaswamy H. Sarma.
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Affiliation(s)
- Milena J Szafraniec
- Łukasiewicz Research Network - PORT Polish Center for Technology Development, Wrocław, Poland
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Hirose M, Tsukatani Y, Harada J, Tamiaki H. Characterization of regioisomeric diterpenoid tails in bacteriochlorophylls produced by geranylgeranyl reductase from Halorhodospira halochloris and Blastochloris viridis. PHOTOSYNTHESIS RESEARCH 2022; 154:1-12. [PMID: 35852706 DOI: 10.1007/s11120-022-00938-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2022] [Accepted: 06/27/2022] [Indexed: 06/15/2023]
Abstract
Geranylgeranyl reductase (GGR) encoded by the bchP gene catalyzes the reductions of three unsaturated C = C double bonds (C6 = C7, C10 = C11, and C14 = C15) in a geranylgeranyl (GG) group of the esterifying moiety in 17-propionate residue of bacteriochlorophyll (BChl) molecules. It was recently reported that GGR in Halorhodospira halochloris potentially catalyzes two hydrogenations, yielding BChl with a tetrahydrogeranylgeranyl (THGG) tail. Furthermore, its engineered GGR, in which N-terminal insertion peptides characteristic for H. halochloris were deleted, performed single hydrogenation, producing BChl with a dihydrogeranylgeranyl (DHGG) tail. In some of these enzymatic reactions, it remained unclear in which order the C = C double bond in a GG group was first reduced. In this study, we demonstrated that the (variant) GGR from H. halochloris catalyzed an initial reduction of the C6 = C7 double bond to yield a 6,7-DHGG tail. The intact GGR of H. halochloris catalyzed the further hydrogenation of the C14 = C15 double bonds to give a 6,7,14,15-THGG group, whereas deleting the characteristic peptide region from the GGR suppressed the C14 = C15 reduction. We also verified that in a model bacterium, Blastochloris viridis producing standard BChl-b, the reduction of a GG to phytyl group occurred via 10,11-DHGG and 6,7,10,11-THGG. The high-performance liquid chromatographic elution profiles of BChls-a/b employed in this study are essential for identifying the regioisomeric diterpenoid tails in the BChls of phototrophic bacteria distributed in nature and elucidating GGR enzymatic reactions.
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Affiliation(s)
- Mitsuaki Hirose
- Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga, 525-8577, Japan
| | - Yusuke Tsukatani
- Institute for Extra-Cutting-Edge Science and Technology Avant-Garde Research (X-Star), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Kanagawa, 237-0061, Japan
| | - Jiro Harada
- Department of Medical Biochemistry, Kurume University School of Medicine, Fukuoka, 830-0011, Japan
| | - Hitoshi Tamiaki
- Graduate School of Life Sciences, Ritsumeikan University, Kusatsu, Shiga, 525-8577, Japan.
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7
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Synthesis of metalloporphyrin complexes based on chlorophyllin. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.132841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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8
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Sadhanala HK, Pagidi S, Yadav S, Beiderman M, Grinberg I, Fixler D, Gedanken A. Boron‐doped Carbon Dots with Surface Oxygen Functional Groups as a Highly Sensitive and Label‐free Photoluminescence Probe for the Enhanced Detection of Mg
2+
Ions. ChemistrySelect 2022. [DOI: 10.1002/slct.202201261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Affiliation(s)
| | - Sudhakar Pagidi
- Department of Chemistry Bar-Ilan University Ramat-Gan 5290002 Israel
| | - Suhas Yadav
- Department of Chemistry Bar-Ilan University Ramat-Gan 5290002 Israel
| | | | - Ilya Grinberg
- Department of Chemistry Bar-Ilan University Ramat-Gan 5290002 Israel
| | - Dror Fixler
- Faculty of Engineering Bar-Ilan University Ramat Gan 5290002 Israel
| | - Aharon Gedanken
- Department of Chemistry Bar-Ilan University Ramat-Gan 5290002 Israel
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9
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Paper M, Glemser M, Haack M, Lorenzen J, Mehlmer N, Fuchs T, Schenk G, Garbe D, Weuster-Botz D, Eisenreich W, Lakatos M, Brück TB. Efficient Green Light Acclimation of the Green Algae Picochlorum sp. Triggering Geranylgeranylated Chlorophylls. Front Bioeng Biotechnol 2022; 10:885977. [PMID: 35573232 PMCID: PMC9095919 DOI: 10.3389/fbioe.2022.885977] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Accepted: 04/11/2022] [Indexed: 11/19/2022] Open
Abstract
In analogy to higher plants, eukaryotic microalgae are thought to be incapable of utilizing green light for growth, due to the “green gap” in the absorbance profiles of their photosynthetic pigments. This study demonstrates, that the marine chlorophyte Picochlorum sp. is able to grow efficiently under green light emitting diode (LED) illumination. Picochlorum sp. growth and pigment profiles under blue, red, green and white LED illumination (light intensity: 50–200 μmol m−2 s−1) in bottom-lightened shake flask cultures were evaluated. Green light-treated cultures showed a prolonged initial growth lag phase of one to 2 days, which was subsequently compensated to obtain comparable biomass yields to red and white light controls (approx. 0.8 gDW L−1). Interestingly, growth and final biomass yields of the green light-treated sample were higher than under blue light with equivalent illumination energies. Further, pigment analysis indicated, that during green light illumination, Picochlorum sp. formed unknown pigments (X1-X4). Pigment concentrations increased with illumination intensity and were most abundant during the exponential growth phase. Mass spectrometry and nuclear magnetic resonance data indicated, that pigments X1-X2 and X3-X4 are derivatives of chlorophyll b and a, which harbor C=C bonds in the phytol side chain similar to geranylgeranylated chlorophylls. Thus, for the first time, the natural accumulation of large pools (approx. 12 mg gDW−1) of chlorophyll intermediates with incomplete hydrogenation of their phytyl chains is demonstrated for algae under monochromatic green light (Peak λ 510 nm, full width at half maximum 91 nm). The ability to utilize green light offers competitive advantages for enhancing biomass production, particularly under conditions of dense cultures, long light pathways and high light intensity. Green light acclimation for an eukaryotic microalgae in conjunction with the formation of new aberrant geranylgeranylated chlorophylls and high efficiency of growth rates are novel for eukaryotic microalgae. Illumination with green light could enhance productivity in industrial processes and trigger the formation of new metabolites–thus, underlying mechanisms require further investigation.
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Affiliation(s)
- Michael Paper
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, Technical University of Munich, Garching, Germany
| | - Matthias Glemser
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, Technical University of Munich, Garching, Germany
- TUM AlgaeTec Center, Ludwig Bölkow Campus, Department of Aerospace and Geodesy, Taufkirchen, Germany
| | - Martina Haack
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, Technical University of Munich, Garching, Germany
| | - Jan Lorenzen
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, Technical University of Munich, Garching, Germany
| | - Norbert Mehlmer
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, Technical University of Munich, Garching, Germany
| | - Tobias Fuchs
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, Technical University of Munich, Garching, Germany
- TUM AlgaeTec Center, Ludwig Bölkow Campus, Department of Aerospace and Geodesy, Taufkirchen, Germany
| | - Gerhard Schenk
- School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, QLD, Australia
- Sustainable Minerals Institute, The University of Queensland, Brisbane, QLD, Australia
| | - Daniel Garbe
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, Technical University of Munich, Garching, Germany
- TUM AlgaeTec Center, Ludwig Bölkow Campus, Department of Aerospace and Geodesy, Taufkirchen, Germany
| | - Dirk Weuster-Botz
- TUM AlgaeTec Center, Ludwig Bölkow Campus, Department of Aerospace and Geodesy, Taufkirchen, Germany
- Institute of Biochemical Engineering, Faculty of Mechanical Engineering, Technical University of Munich, Garching, Germany
| | - Wolfgang Eisenreich
- Chair of Biochemistry, Department of Chemistry, Technical University of Munich, Garching, Germany
| | - Michael Lakatos
- Integrative Biotechnology, University of Applied Sciences Kaiserslautern, Pirmasens, Germany
| | - Thomas B. Brück
- Werner Siemens-Chair of Synthetic Biotechnology, Department of Chemistry, Technical University of Munich, Garching, Germany
- TUM AlgaeTec Center, Ludwig Bölkow Campus, Department of Aerospace and Geodesy, Taufkirchen, Germany
- *Correspondence: Thomas B. Brück,
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10
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ZHU ZHE, Higashi M, Saito S. Excited states of chlorophyll a and b in solution by time-dependent density functional theory. J Chem Phys 2022; 156:124111. [DOI: 10.1063/5.0083395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Abstract
The ground state and excited state electronic properties of chlorophyll (Chl) a and Chl b in diethyl ether, acetone, and ethanol solutions are investigated using quantum mechanical and molecular mechanical calculations with density functional theory (DFT) and time-dependent DFT (TDDFT). Although the DFT/TDDFT methods are widely used, the electronic structures of molecules, especially large molecules, calculated with these methods are known to be strongly dependent on the functionals and the parameters used in functionals. Here, we optimize the range-separated parameter, µ, of the CAM-B3LYP functional of Chl a and Chl b to reproduce the experimental excitation energy differences of these Chl molecules in solution. The optimal values of µ for Chl a and Chl b are smaller than the default value of µ and that for bacteriochlorophyll a, indicating the change in electronic distribution, i.e., an increase in electron delocalization, within the molecule. We find that the electronic distribution of Chl b with an extra formyl group is different from that of Chl a. We also find that the polarity of solution and hydrogen bond cause the decrease in the excitation energies and the increase in the widths of excitation energy distributions of Chl a and Chl b. The present results are expected to be useful for understanding the electronic properties of each pigment molecule in a local heterogeneous environment, which will play an important role in the excitation energy transfer in light-harvesting complex II.
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Affiliation(s)
| | - Masahiro Higashi
- Department of Molecular Engineering, Kyoto University - Katsura Campus, Japan
| | - Shinji Saito
- Department of Theoretical and Computational Molecular Science, Institute for Molecular Science, Japan
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11
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Abstract
Chlorophylls provide the basis for photosynthesis and thereby most life on Earth. Besides their involvement in primary charge separation in the reaction center, they serve as light-harvesting and light-sensing pigments, they also have additional functions, e.g., in inter-system electron transfer. Chlorophylls also have a wealth of applications in basic science, medicine, as colorants and, possibly, in optoelectronics. Considering that there has been more than 200 years of chlorophyll research, one would think that all has been said on these pigments. However, the opposite is true: ongoing research evidenced in this Special Issue brings together current work on chlorophylls and on their carotenoid counterparts. These introductory notes give a very brief and in part personal account of the history of chlorophyll research and applications, before concluding with a snapshot of this year's publications.
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Affiliation(s)
- Hugo Scheer
- Bereich Systematik, Biodiversität und Evolution der Pflanzen, Universität München, Menzinger Str. 67, 80638 München, Germany
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A Comparison of the Effects of Several Foliar Forms of Magnesium Fertilization on ‘Superior Seedless’ (Vitis vinifera L.) in Saline Soils. COATINGS 2022. [DOI: 10.3390/coatings12020201] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Magnesium (Mg) is the most essential element constituent in chlorophyll molecules that regulates photosynthesis processes. The physiological response of ‘Superior Seedless’ grapes was evaluated under different foliar magnesium fertilization such as sulfate magnesium (MgSO4·7 H2O), magnesium disodium EDTA (Mg-EDTA), and magnesium nanoparticles (Mg-NPs) during the berry development stages (flowering, fruit set, veraison, and harvest). In general, the ‘Superior Seedless’ vine had a higher performance in photosynthesis with Mg-NPs application than other forms. The Fy/Fm ratio declined rapidly after the fruit set stage; then, it decreased gradually up until the harvesting stage. However, both MgSO4 and Mg-EDTA forms showed slight differences in Fv/Fm ratio during the berry development stages. The outcomes of this research suggest that the Fv/Fm ratio during the growth season of the ‘Superior Seedless’ vine may be a good tool to assess magnesium fertilization effects before visible deficiency symptoms appear. Mg-NPs are more effective at improving ‘Superior Seedless’ berry development than the other magnesium forms. These findings suggest that applying foliar Mg-NPs to vines grown on salinity-sandy soil alleviates the potential Mg deficiency in ‘Superior Seedless’ vines and improves bunches quality.
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13
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Banu S, Yadav PP. Chlorophyll: the ubiquitous photocatalyst of nature and its potential as an organo-photocatalyst in organic syntheses. Org Biomol Chem 2022; 20:8584-8598. [DOI: 10.1039/d2ob01473d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
The emergence of chlorophyll, the principal photoacceptor of green plants, as an organo-photocatalyst.
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Affiliation(s)
- Saira Banu
- Medicinal and Process Chemistry Division, CSIR-Central Drug Research Institute, Lucknow-226031, India
- Academy of Scientific & Innovative Research, Ghaziabad-201002, India
| | - Prem P. Yadav
- Medicinal and Process Chemistry Division, CSIR-Central Drug Research Institute, Lucknow-226031, India
- Academy of Scientific & Innovative Research, Ghaziabad-201002, India
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14
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Gorka M, Baldansuren A, Malnati A, Gruszecki E, Golbeck JH, Lakshmi KV. Shedding Light on Primary Donors in Photosynthetic Reaction Centers. Front Microbiol 2021; 12:735666. [PMID: 34659164 PMCID: PMC8517396 DOI: 10.3389/fmicb.2021.735666] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2021] [Accepted: 08/30/2021] [Indexed: 11/17/2022] Open
Abstract
Chlorophylls (Chl)s exist in a variety of flavors and are ubiquitous in both the energy and electron transfer processes of photosynthesis. The functions they perform often occur on the ultrafast (fs-ns) time scale and until recently, these have been difficult to measure in real time. Further, the complexity of the binding pockets and the resulting protein-matrix effects that alter the respective electronic properties have rendered theoretical modeling of these states difficult. Recent advances in experimental methodology, computational modeling, and emergence of new reaction center (RC) structures have renewed interest in these processes and allowed researchers to elucidate previously ambiguous functions of Chls and related pheophytins. This is complemented by a wealth of experimental data obtained from decades of prior research. Studying the electronic properties of Chl molecules has advanced our understanding of both the nature of the primary charge separation and subsequent electron transfer processes of RCs. In this review, we examine the structures of primary electron donors in Type I and Type II RCs in relation to the vast body of spectroscopic research that has been performed on them to date. Further, we present density functional theory calculations on each oxidized primary donor to study both their electronic properties and our ability to model experimental spectroscopic data. This allows us to directly compare the electronic properties of hetero- and homodimeric RCs.
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Affiliation(s)
- Michael Gorka
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, United States
| | - Amgalanbaatar Baldansuren
- Department of Chemistry and Chemical Biology and The Baruch ’60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY, United States
| | - Amanda Malnati
- Department of Chemistry and Chemical Biology and The Baruch ’60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY, United States
| | - Elijah Gruszecki
- Department of Chemistry and Chemical Biology and The Baruch ’60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY, United States
| | - John H. Golbeck
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, PA, United States
- Department of Chemistry, The Pennsylvania State University, University Park, PA, United States
| | - K. V. Lakshmi
- Department of Chemistry and Chemical Biology and The Baruch ’60 Center for Biochemical Solar Energy Research, Rensselaer Polytechnic Institute, Troy, NY, United States
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15
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Alamri S, Alsubaie QD, Al-Amri AA, Al-Munqedi B, Ali HM, Kushwaha BK, Singh VP, Siddiqui MH. Priming of tomato seedlings with 2-oxoglutarate induces arsenic toxicity alleviatory responses by involving endogenous nitric oxide. PHYSIOLOGIA PLANTARUM 2021; 173:45-57. [PMID: 32656764 DOI: 10.1111/ppl.13168] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/11/2020] [Revised: 06/04/2020] [Accepted: 07/06/2020] [Indexed: 06/11/2023]
Abstract
Metal toxicity in crop plants is a matter of scientific concern. Therefore, in recent years efforts have been made to minimize metal toxicity in crop plants. Out of various strategies, priming of seedlings with certain chemicals, like e.g. donors of signaling molecules, nutrients, metabolites or plant hormones has shown encouraging results. However, mechanisms related with the priming-induced mitigation of metal toxicity are still poorly known. Hence, we have tested the potential of 2-oxoglutarate (2-OG) priming in enhancing the arsenate (AsV ) toxicity tolerance in tomato seedlings along with deciphering the probable role of nitric oxide (NO) in accomplishing this task. Arsenate decreased growth, endogenous NO and nitric oxide synthase-like activity but enhanced the accumulation of As, which collectively led to root cell death. Arsenate toxicity also decreased some photosynthetic characteristics (i.e. Fv /Fm, qP, Fv /F0 and Fm /F0 , and total chlorophyll content) but enhanced NPQ. However, priming with 2-OG alleviated the toxic effect of AsV on growth, endogenous NO, cell death and photosynthesis. Moreover, arsenate inhibited the activities of enzymes of nitrogen metabolism (i.e. nitrate reductase, nitrite reductase, glutamine synthetase and glutamine 2-oxoglutarate aminotransferase) but increased the activity of glutamate dehydrogenase and NH4 + content. Superoxide radicals, hydrogen peroxide, lipid peroxidation, protein oxidation and membrane damage increased upon AsV exposure, but the antioxidant enzymes (i.e. superoxide dismutase, catalase and glutathione-S-transferase) showed differential responses. Overall, our results showed that 2-OG is capable of alleviating AsV toxicity in tomato seedlings but the involvement of endogenous NO is probably required.
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Affiliation(s)
- Saud Alamri
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Qasi D Alsubaie
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Abdullah A Al-Amri
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Bandar Al-Munqedi
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Hayssam M Ali
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Bishwajit K Kushwaha
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, A Constituent Post Graduate College of University of Allahabad, Prayagraj, 211002, India
| | - Vijay P Singh
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, A Constituent Post Graduate College of University of Allahabad, Prayagraj, 211002, India
| | - Manzer H Siddiqui
- Department of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
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16
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Dobson Z, Ahad S, Vanlandingham J, Toporik H, Vaughn N, Vaughn M, Williams D, Reppert M, Fromme P, Mazor Y. The structure of photosystem I from a high-light-tolerant cyanobacteria. eLife 2021; 10:e67518. [PMID: 34435952 PMCID: PMC8428864 DOI: 10.7554/elife.67518] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2021] [Accepted: 08/25/2021] [Indexed: 12/22/2022] Open
Abstract
Photosynthetic organisms have adapted to survive a myriad of extreme environments from the earth's deserts to its poles, yet the proteins that carry out the light reactions of photosynthesis are highly conserved from the cyanobacteria to modern day crops. To investigate adaptations of the photosynthetic machinery in cyanobacteria to excessive light stress, we isolated a new strain of cyanobacteria, Cyanobacterium aponinum 0216, from the extreme light environment of the Sonoran Desert. Here we report the biochemical characterization and the 2.7 Å resolution structure of trimeric photosystem I from this high-light-tolerant cyanobacterium. The structure shows a new conformation of the PsaL C-terminus that supports trimer formation of cyanobacterial photosystem I. The spectroscopic analysis of this photosystem I revealed a decrease in far-red absorption, which is attributed to a decrease in the number of long- wavelength chlorophylls. Using these findings, we constructed two chimeric PSIs in Synechocystis sp. PCC 6803 demonstrating how unique structural features in photosynthetic complexes can change spectroscopic properties, allowing organisms to thrive under different environmental stresses.
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Affiliation(s)
- Zachary Dobson
- School of Molecular Sciences, Arizona State UniversityTempeUnited States
- BiodesignCenter for Applied Structural Discovery, Arizona State UniversityTempeUnited States
| | - Safa Ahad
- Department of Chemistry, Purdue UniversityWest LafayetteUnited States
| | - Jackson Vanlandingham
- School of Molecular Sciences, Arizona State UniversityTempeUnited States
- BiodesignCenter for Applied Structural Discovery, Arizona State UniversityTempeUnited States
| | - Hila Toporik
- School of Molecular Sciences, Arizona State UniversityTempeUnited States
- BiodesignCenter for Applied Structural Discovery, Arizona State UniversityTempeUnited States
| | - Natalie Vaughn
- School of Molecular Sciences, Arizona State UniversityTempeUnited States
- BiodesignCenter for Applied Structural Discovery, Arizona State UniversityTempeUnited States
| | - Michael Vaughn
- School of Molecular Sciences, Arizona State UniversityTempeUnited States
- BiodesignCenter for Applied Structural Discovery, Arizona State UniversityTempeUnited States
| | - Dewight Williams
- John M. Cowley Center for High Resolution Electron Microscopy, Arizona State UniversityTempeUnited States
| | - Michael Reppert
- Department of Chemistry, Purdue UniversityWest LafayetteUnited States
| | - Petra Fromme
- School of Molecular Sciences, Arizona State UniversityTempeUnited States
- BiodesignCenter for Applied Structural Discovery, Arizona State UniversityTempeUnited States
| | - Yuval Mazor
- School of Molecular Sciences, Arizona State UniversityTempeUnited States
- BiodesignCenter for Applied Structural Discovery, Arizona State UniversityTempeUnited States
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17
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Santra K, Song A, Petrich JW, Rasmussen MA. The degradation of chlorophyll pigments in dairy silage: the timeline of anaerobic fermentation. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2021; 101:2863-2868. [PMID: 33151573 DOI: 10.1002/jsfa.10917] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Revised: 10/16/2020] [Accepted: 11/05/2020] [Indexed: 06/11/2023]
Abstract
BACKGROUND Detection of chlorophyll metabolites in milk has recently been suggested to be an indicator of a grass-fed diet fed for cattle. Such a means of detection, however, is complicated when the grazing season is over because cattle can be fed fermented silage ingredients, such as alfalfa and corn silage. During fermentation, chlorophyll compounds and other pigments undergo degradation due to the accumulation of lactic acid and the resultant decline in pH. RESULTS We monitored degradation of chlorophyll compounds by measuring the fluorescence and absorption spectra of silage extracts. The spectroscopic evidence supports the hypothesis that chlorophylls are converted into fluorescent products, such as pheophytin, and further cleaved into pheophorbide. The degradation starts with dechelation and removal of the magnesium ion to produce pheophytin. Further removal of the phytol chain from pheophytin results in the production of pheophorbide. CONCLUSIONS The fluorescence intensity of these degradation products is reduced compared to that of the parent molecule. These findings are important in understanding the fluorescent signal in milk when cows consume silage rather than fresh pasture grass. © 2020 Society of Chemical Industry.
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Affiliation(s)
- Kalyan Santra
- US Department of Energy, Ames Laboratory, Ames, IA, USA
- Department of Chemistry, Iowa State University, Ames, IA, USA
| | - Anthony Song
- Department of Chemistry, Iowa State University, Ames, IA, USA
| | - Jacob W Petrich
- US Department of Energy, Ames Laboratory, Ames, IA, USA
- Department of Chemistry, Iowa State University, Ames, IA, USA
| | - Mark A Rasmussen
- Department of Animal Science and Leopold Center for Sustainable Agriculture, Iowa State University, Ames, IA, USA
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18
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Solymosi K, Mysliwa-Kurdziel B. The Role of Membranes and Lipid-Protein Interactions in the Mg-Branch of Tetrapyrrole Biosynthesis. FRONTIERS IN PLANT SCIENCE 2021; 12:663309. [PMID: 33995458 PMCID: PMC8113382 DOI: 10.3389/fpls.2021.663309] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 03/22/2021] [Indexed: 05/31/2023]
Abstract
Chlorophyll (Chl) is essential for photosynthesis and needs to be produced throughout the whole plant life, especially under changing light intensity and stress conditions which may result in the destruction and elimination of these pigments. All steps of the Mg-branch of tetrapyrrole biosynthesis leading to Chl formation are carried out by enzymes associated with plastid membranes. Still the significance of these protein-membrane and protein-lipid interactions in Chl synthesis and chloroplast differentiation are not very well-understood. In this review, we provide an overview on Chl biosynthesis in angiosperms with emphasis on its association with membranes and lipids. Moreover, the last steps of the pathway including the reduction of protochlorophyllide (Pchlide) to chlorophyllide (Chlide), the biosynthesis of the isoprenoid phytyl moiety and the esterification of Chlide are also summarized. The unique biochemical and photophysical properties of the light-dependent NADPH:protochlorophyllide oxidoreductase (LPOR) enzyme catalyzing Pchlide photoreduction and located to peculiar tubuloreticular prolamellar body (PLB) membranes of light-deprived tissues of angiosperms and to envelope membranes, as well as to thylakoids (especially grana margins) are also reviewed. Data about the factors influencing tubuloreticular membrane formation within cells, the spectroscopic properties and the in vitro reconstitution of the native LPOR enzyme complexes are also critically discussed.
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Affiliation(s)
- Katalin Solymosi
- Department of Plant Anatomy, ELTE Eötvös Loránd University, Budapest, Hungary
| | - Beata Mysliwa-Kurdziel
- Department of Plant Physiology and Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Krakow, Poland
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19
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Magnesium Foliar Supplementation Increases Grain Yield of Soybean and Maize by Improving Photosynthetic Carbon Metabolism and Antioxidant Metabolism. PLANTS 2021; 10:plants10040797. [PMID: 33921574 PMCID: PMC8072903 DOI: 10.3390/plants10040797] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Revised: 04/14/2021] [Accepted: 04/15/2021] [Indexed: 12/20/2022]
Abstract
(1) Background: The aim of this study was to explore whether supplementary magnesium (Mg) foliar fertilization to soybean and maize crops established in a soil without Mg limitation can improve the gas exchange and Rubisco activity, as well as improve antioxidant metabolism, converting higher plant metabolism into grain yield. (2) Methods: Here, we tested foliar Mg supplementation in soybean followed by maize. Nutritional status of plants, photosynthesis, PEPcase and Rubisco activity, sugar concentration on leaves, oxidative stress, antioxidant metabolism, and finally the crops grain yields were determined. (3) Results: Our results demonstrated that foliar Mg supplementation increased the net photosynthetic rate and stomatal conductance, and reduced the sub-stomatal CO2 concentration and leaf transpiration by measuring in light-saturated conditions. The improvement in photosynthesis (gas exchange and Rubisco activity) lead to an increase in the concentration of sugar in the leaves before grain filling. In addition, we also confirmed that foliar Mg fertilization can improve anti-oxidant metabolism, thereby reducing the environmental stress that plants face during their crop cycle in tropical field conditions. (4) Conclusions: Our research brings the new glimpse of foliar Mg fertilization as a strategy to increase the metabolism of crops, resulting in increased grain yields. This type of biological strategy could be encouraged for wide utilization in cropping systems.
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20
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Hydrophobic interaction driving the binding of soybean protein isolate and chlorophyll: Improvements to the thermal stability of chlorophyll. Food Hydrocoll 2021. [DOI: 10.1016/j.foodhyd.2020.106465] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
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21
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Gupta S, Thokchom SD, Kapoor R. Arbuscular Mycorrhiza Improves Photosynthesis and Restores Alteration in Sugar Metabolism in Triticum aestivum L. Grown in Arsenic Contaminated Soil. FRONTIERS IN PLANT SCIENCE 2021; 12:640379. [PMID: 33777073 PMCID: PMC7991624 DOI: 10.3389/fpls.2021.640379] [Citation(s) in RCA: 33] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Accepted: 02/11/2021] [Indexed: 05/05/2023]
Abstract
Contamination of agricultural soil by arsenic (As) is a serious menace to environmental safety and global food security. Symbiotic plant-microbe interaction, such as arbuscular mycorrhiza (AM), is a promising approach to minimize hazards of As contamination in agricultural soil. Even though the potential of AM fungi (AMF) in redeeming As tolerance and improving growth is well recognized, the detailed metabolic and physiological mechanisms behind such beneficial effects are far from being completely unraveled. The present study investigated the ability of an AM fungus, Rhizophagus intraradices, in mitigating As-mediated negative effects on photosynthesis and sugar metabolism in wheat (Triticum aestivum) subjected to three levels of As, viz., 0, 25, and 50 mg As kg-1 of soil, supplied as sodium arsenate. As exposure caused significant decrease in photosynthetic pigments, Hill reaction activity, and gas exchange parameters such as net photosynthetic rate, stomatal conductance, transpiration rate, and intercellular CO2 concentration. In addition, As exposure also altered the activities of starch-hydrolyzing, sucrose-synthesizing, and sucrose-degrading enzymes in leaves. Colonization by R. intraradices not only promoted plant growth but also restored As-mediated impairments in plant physiology. The symbiosis augmented the concentration of photosynthetic pigments, enhanced Hill reaction activity, and improved leaf gas exchange parameters and water use efficiency of T. aestivum even at high dose of 50 mg As kg-1 of soil. Furthermore, inoculation with R. intraradices also restored As-mediated alteration in sugar metabolism by modulating the activities of starch phosphorylase, α-amylase, β-amylase, acid invertase, sucrose synthase, and sucrose-phosphate synthase in leaves. This ensured improved sugar and starch levels in mycorrhizal plants. Overall, the study advocates the potential of R. intraradices in bio-amelioration of As-induced physiological disturbances in wheat plant.
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Affiliation(s)
| | | | - Rupam Kapoor
- Department of Botany, University of Delhi, New Delhi, India
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22
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Reimers JR, Rätsep M, Freiberg A. Asymmetry in the Q y Fluorescence and Absorption Spectra of Chlorophyll a Pertaining to Exciton Dynamics. Front Chem 2020; 8:588289. [PMID: 33344415 PMCID: PMC7738624 DOI: 10.3389/fchem.2020.588289] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2020] [Accepted: 10/26/2020] [Indexed: 11/13/2022] Open
Abstract
Significant asymmetry found between the high-resolution Qy emission and absorption spectra of chlorophyll-a is herein explained, providing basic information needed to understand photosynthetic exciton transport and photochemical reactions. The Qy spectral asymmetry in chlorophyll has previously been masked by interference in absorption from the nearby Qx transition, but this effect has recently been removed using extensive quantum spectral simulations or else by analytical inversion of absorption and magnetic circular dichroism data, allowing high-resolution absorption information to be accurately determined from fluorescence-excitation spectra. To compliment this, here, we measure and thoroughly analyze the high-resolution differential fluorescence line narrowing spectra of chlorophyll-a in trimethylamine and in 1-propanol. The results show that vibrational frequencies often change little between absorption and emission, yet large changes in line intensities are found, this effect also being strongly solvent dependent. Among other effects, the analysis in terms of four basic patterns of Duschinsky-rotation matrix elements, obtained using CAM-B3LYP calculations, predicts that a chlorophyll-a molecule excited into a specific vibrational level, may, without phase loss or energy relaxation, reemit the light over a spectral bandwidth exceeding 1,000 cm−1 (0.13 eV) to influence exciton-transport dynamics.
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Affiliation(s)
- Jeffrey R Reimers
- School of Chemistry, The University of Sydney, Sydney, NSW, Australia
| | - Margus Rätsep
- Institute of Physics, University of Tartu, Tartu, Estonia
| | - Arvi Freiberg
- Institute of Physics, University of Tartu, Tartu, Estonia.,Institute of Molecular and Cell Biology, University of Tartu, Tartu, Estonia
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23
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Basil plants grown under intermittent light stress in a small-scale indoor environment: Introducing energy demand reduction intelligent technologies. Food Control 2020. [DOI: 10.1016/j.foodcont.2020.107389] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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24
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Ramakrishna TRB, Mathesh M, Liu Z, Zhang C, Du A, Liu J, Barrow CJ, Chen M, Biggs MJ, Yang W. Solvent Effect on Supramolecular Self-Assembly of Chlorophylls a on Chemically Reduced Graphene Oxide. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2020; 36:13575-13582. [PMID: 33085489 DOI: 10.1021/acs.langmuir.0c02370] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Solvent plays an important role in the surface interaction of molecules. In this study, we use "chlorophyll a", an archetypical molecule, to investigate its supramolecular self-assembly with chemically reduced graphene oxide in three different types of solvents: polar protic, polar aprotic, and non-polar. It was observed that only a polar protic solvent that can donate protons facilitates the hydrogen bonding between chlorophyll a and chemically reduced graphene oxide nanosheets in a hybrid system. The formation of hydrogen bonds further initiates the other non-covalent interactions such as π-π stacking and hydrophobic interaction, which altogether play a key driving force for supramolecular self-assembly of chlorophylls on chemically reduced graphene oxides. The experimental results are strongly supported by density functional theory calculations, which show robust electron coupling between chlorophylls and chemically reduced graphene oxide.
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Affiliation(s)
| | - Motilal Mathesh
- School of Life and Environmental Science, Deakin University, Geelong, Victoria 3216, Australia
| | - Zhen Liu
- College of Materials Science and Engineering, Institute for Graphene Applied Technology Innovation, Qingdao University, Qingdao 266071, People's Republic of China
| | - Chunmei Zhang
- Institute of Modern Physics, School of Physics, Northwest University, Xi'an 710069, People's Republic of China
| | - Aijun Du
- Science and Engineering Faculty, Queensland University of Technology, Brisbane, Queensland 4000, Australia
| | - Jingquan Liu
- College of Materials Science and Engineering, Institute for Graphene Applied Technology Innovation, Qingdao University, Qingdao 266071, People's Republic of China
| | - Colin J Barrow
- School of Life and Environmental Science, Deakin University, Geelong, Victoria 3216, Australia
| | - Min Chen
- School of Biological Science, The University of Sydney, Sydney, New South Wales 2006, Australia
| | - Mark J Biggs
- Heriot-Watt University, Edinburgh, EH14 4AS, United Kingdom
| | - Wenrong Yang
- School of Life and Environmental Science, Deakin University, Geelong, Victoria 3216, Australia
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25
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Leiger K, Linnanto JM, Freiberg A. Establishment of the Qy Absorption Spectrum of Chlorophyll a Extending to Near-Infrared. Molecules 2020; 25:molecules25173796. [PMID: 32825445 PMCID: PMC7503670 DOI: 10.3390/molecules25173796] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2020] [Revised: 08/17/2020] [Accepted: 08/19/2020] [Indexed: 02/06/2023] Open
Abstract
A weak absorption tail related to the Qy singlet electronic transition of solvated chlorophyll a is discovered using sensitive anti-Stokes fluorescence excitation spectroscopy. The quasi-exponentially decreasing tail was, at ambient temperature, readily observable as far as -2400 cm-1 from the absorption peak and at relative intensity of 10-7. The tail also weakened rapidly upon cooling the sample, implying its basic thermally activated nature. The shape of the spectrum as well as its temperature dependence were qualitatively well reproduced by quantum chemical calculations involving the pigment intramolecular vibrational modes, their overtones, and pairwise combination modes, but no intermolecular/solvent modes. A similar tail was observed earlier in the case of bacteriochlorophyll a, suggesting generality of this phenomenon. Long vibronic red tails are, thus, expected to exist in all pigments of light-harvesting relevance at physiological temperatures.
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Affiliation(s)
- Kristjan Leiger
- Institute of Physics, University of Tartu, W. Ostwaldi 1, 51011 Tartu, Estonia; (K.L.); (J.M.L.)
| | - Juha Matti Linnanto
- Institute of Physics, University of Tartu, W. Ostwaldi 1, 51011 Tartu, Estonia; (K.L.); (J.M.L.)
| | - Arvi Freiberg
- Institute of Physics, University of Tartu, W. Ostwaldi 1, 51011 Tartu, Estonia; (K.L.); (J.M.L.)
- Institute of Molecular and Cell Biology, University of Tartu, Riia 23, 51014 Tartu, Estonia
- Estonian Academy of Sciences, Kohtu 6, 10130 Tallinn, Estonia
- Correspondence:
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26
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Pucelik B, Sułek A, Dąbrowski JM. Bacteriochlorins and their metal complexes as NIR-absorbing photosensitizers: properties, mechanisms, and applications. Coord Chem Rev 2020. [DOI: 10.1016/j.ccr.2020.213340] [Citation(s) in RCA: 45] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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27
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Kim SB, Bisson J, Friesen JB, Pauli GF, Simmler C. Selective Chlorophyll Removal Method to "Degreen" Botanical Extracts. JOURNAL OF NATURAL PRODUCTS 2020; 83:1846-1858. [PMID: 32426979 PMCID: PMC7398693 DOI: 10.1021/acs.jnatprod.0c00005] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Chlorophylls are present in all extracts from the aerial parts of green plant materials. Chlorophylls may act as in vitro bioassay nuisance compounds, possibly preventing the reproducibility and accurate measurement of readouts due to their UV/vis absorbance, fluorescence properties, and tendency to precipitate in aqueous media. Despite the diversity of methods used traditionally to remove chlorophylls, details about their mode of operation, specificity, and reproducibility are scarce. Herein, we report a selective and efficient 45 min liquid-liquid/countercurrent chlorophyll cleanup method using Centrifugal Partition Chromatography (CPC) with a solvent system composed of hexanes-EtOAc-MeOH-water (5:5:5:5, v/v) in elution-extrusion mode. The broader utility of the method was assessed with four different extracts prepared from three well-characterized plant materials: Epimedium sagittatum (leaves), Senna alexandrina (leaves), and Trifolium pratense (aerial parts). The reproducibility of the method, the selectivity of the chlorophyll removal, as well as the preservation of the phytochemical integrity of the resulting chlorophyll-free ("degreened") extracts were evaluated using HPTLC, UHPLC-UV, 1H NMR spectroscopy, and LC-MS as orthogonal phytochemical methods. The cleanup process adequately preserves the metabolomic diversity as well as the integrity of the original extracts. This method was found to be sufficiently rapid for the "degreening" of botanical extracts in higher-throughput sample preparation for further biological screening.
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Affiliation(s)
- Seon Beom Kim
- Center for Natural Product Technologies, Program for Collaborative Research in the Pharmaceutical Sciences (PCRPS) and Department of Pharmaceutical Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, IL 60607, United States
| | - Jonathan Bisson
- Center for Natural Product Technologies, Program for Collaborative Research in the Pharmaceutical Sciences (PCRPS) and Department of Pharmaceutical Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, IL 60607, United States
| | - J. Brent Friesen
- Center for Natural Product Technologies, Program for Collaborative Research in the Pharmaceutical Sciences (PCRPS) and Department of Pharmaceutical Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, IL 60607, United States
- Physical Sciences Department, Rosary College of Arts and Sciences, Dominican University, River Forest, IL 60305, United States
| | - Guido F. Pauli
- Center for Natural Product Technologies, Program for Collaborative Research in the Pharmaceutical Sciences (PCRPS) and Department of Pharmaceutical Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, IL 60607, United States
| | - Charlotte Simmler
- Center for Natural Product Technologies, Program for Collaborative Research in the Pharmaceutical Sciences (PCRPS) and Department of Pharmaceutical Sciences, College of Pharmacy, University of Illinois at Chicago, Chicago, IL 60607, United States
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28
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Abstract
Modified tetrapyrroles are large macrocyclic compounds, consisting of diverse conjugation and metal chelation systems and imparting an array of colors to the biological structures that contain them. Tetrapyrroles represent some of the most complex small molecules synthesized by cells and are involved in many essential processes that are fundamental to life on Earth, including photosynthesis, respiration, and catalysis. These molecules are all derived from a common template through a series of enzyme-mediated transformations that alter the oxidation state of the macrocycle and also modify its size, its side-chain composition, and the nature of the centrally chelated metal ion. The different modified tetrapyrroles include chlorophylls, hemes, siroheme, corrins (including vitamin B12), coenzyme F430, heme d1, and bilins. After nearly a century of study, almost all of the more than 90 different enzymes that synthesize this family of compounds are now known, and expression of reconstructed operons in heterologous hosts has confirmed that most pathways are complete. Aside from the highly diverse nature of the chemical reactions catalyzed, an interesting aspect of comparative biochemistry is to see how different enzymes and even entire pathways have evolved to perform alternative chemical reactions to produce the same end products in the presence and absence of oxygen. Although there is still much to learn, our current understanding of tetrapyrrole biogenesis represents a remarkable biochemical milestone that is summarized in this review.
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Affiliation(s)
- Donald A Bryant
- Department of Biochemistry and Molecular Biology, The Pennsylvania State University, University Park, Pennsylvania 16802
- Department of Chemistry and Biochemistry, Montana State University, Bozeman, Montana 59717
| | - C Neil Hunter
- Department of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom
| | - Martin J Warren
- School of Biosciences, University of Kent, Canterbury CT2 7NJ, United Kingdom
- Quadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, United Kingdom
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29
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Zheng S, Chen Z, Nie H, Sun S, Zhou D, Wang T, Zhai X, Liu T, Xing G, Li M. Identification of differentially expressed photosynthesis- and sugar synthesis-related genes in tomato ( Solanum lycopersicum) plants grown under different CO 2 concentrations. BIOTECHNOL BIOTEC EQ 2020. [DOI: 10.1080/13102818.2020.1715833] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022] Open
Affiliation(s)
- Shaowen Zheng
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
- Collaborative Innovation Center for Improving the Quality and Efficiency of Greenhouse Vegetable in Shanxi Province, College of Horticulture, Shanxi Agricultural University, Taigu, Shanxi, China
| | - Zhifeng Chen
- College of Biological and Agricultural Technology, Zunyi Normal University, Zunyi, Guizhou, China
| | - Hongmei Nie
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
- Collaborative Innovation Center for Improving the Quality and Efficiency of Greenhouse Vegetable in Shanxi Province, College of Horticulture, Shanxi Agricultural University, Taigu, Shanxi, China
| | - Sheng Sun
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
- Collaborative Innovation Center for Improving the Quality and Efficiency of Greenhouse Vegetable in Shanxi Province, College of Horticulture, Shanxi Agricultural University, Taigu, Shanxi, China
| | - Dan Zhou
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
- Collaborative Innovation Center for Improving the Quality and Efficiency of Greenhouse Vegetable in Shanxi Province, College of Horticulture, Shanxi Agricultural University, Taigu, Shanxi, China
| | - Tianhong Wang
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
| | - Xijiao Zhai
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
| | - Tingting Liu
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
| | - Guoming Xing
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
- Collaborative Innovation Center for Improving the Quality and Efficiency of Greenhouse Vegetable in Shanxi Province, College of Horticulture, Shanxi Agricultural University, Taigu, Shanxi, China
| | - Meilan Li
- Department of Horticultural, Shanxi Agricultural University, Taigu, Shanxi, China
- Collaborative Innovation Center for Improving the Quality and Efficiency of Greenhouse Vegetable in Shanxi Province, College of Horticulture, Shanxi Agricultural University, Taigu, Shanxi, China
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30
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Munawaroh HSH, Fathur RM, Gumilar G, Aisyah S, Yuliani G, Mudzakir A, Wulandari AP. Characterization and physicochemical properties of chlorophyll extract from Spirulina sp. ACTA ACUST UNITED AC 2019. [DOI: 10.1088/1742-6596/1280/2/022013] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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31
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Khyasudeen MF, Nowakowski PJ, Nguyen HL, Sim JH, Do TN, Tan HS. Studying the spectral diffusion dynamics of chlorophyll a and chlorophyll b using two-dimensional electronic spectroscopy. Chem Phys 2019. [DOI: 10.1016/j.chemphys.2019.110480] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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32
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Rätsep M, Linnanto JM, Muru R, Biczysko M, Reimers JR, Freiberg A. Absorption-emission symmetry breaking and the different origins of vibrational structures of the 1Qy and 1Qx electronic transitions of pheophytin a. J Chem Phys 2019; 151:165102. [DOI: 10.1063/1.5116265] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
- Margus Rätsep
- Institute of Physics, University of Tartu, W. Ostwaldi 1, 50411 Tartu, Estonia
| | - Juha Matti Linnanto
- Institute of Physics, University of Tartu, W. Ostwaldi 1, 50411 Tartu, Estonia
| | - Renata Muru
- Institute of Physics, University of Tartu, W. Ostwaldi 1, 50411 Tartu, Estonia
| | - Malgorzata Biczysko
- International Centre for Quantum and Molecular Structures and Department of Physics, Shanghai University, Shanghai 200444, China
| | - Jeffrey R. Reimers
- International Centre for Quantum and Molecular Structures and Department of Physics, Shanghai University, Shanghai 200444, China
- School of Mathematical and Physical Sciences, University of Technology Sydney, Sydney, NSW 2007, Australia
| | - Arvi Freiberg
- Institute of Physics, University of Tartu, W. Ostwaldi 1, 50411 Tartu, Estonia and Institute of Molecular and Cell Biology, University of Tartu, Riia 23, 51010 Tartu, Estonia
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33
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Optimization of Photoperiod and Quality Assessment of Basil Plants Grown in a Small-Scale Indoor Cultivation System for Reduction of Energy Demand. ENERGIES 2019. [DOI: 10.3390/en12203980] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Vertical farming is a novel type of food production in indoor environments with artificial lighting and controlled cultivation conditions. In this context, sustainability in small-scale indoor cultivation systems is crucial. Sustainability can be achieved by optimizing all the cultivation factors involved in the production process. The effects of different photoperiod conditions under different timing during plant development—from sowing to germination and maturity—have been studied in a small-scale indoor cultivation area. The main objective of this research was to investigate the possibilities of an optimized photoperiod for basil plants to reduce the energy demand cost of the cultivation unit. Three different photoperiod treatments (P8D16L, P10D14L, and P11D13L) were applied to basil plants with stable light intensity. Furthermore, the photoperiod was shortened to test the reaction of the biomass from the plants in a reduced energy demand system. The dry biomass produced was measured along with the energy consumed in each treatment. The basil quality was assessed by measuring different physiological indices, such as chlorophyll a (Chl a), chlorophyll b (Chl b), total chlorophyll (Chl tot), the fraction of photosynthetically active irradiance absorbed by the leaf, and leaf temperature. The results of the study showed that a shorter photoperiod did not negatively affect the quantity and quality of the basil plants. Continuously, the evaluation of the energy demand variation under the different photoperiod treatments can provide a significant positive impact on the energetic, ecological, and economic aspects of small-scale food production.
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34
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Song Y, Schubert A, Maret E, Burdick RK, Dunietz BD, Geva E, Ogilvie JP. Vibronic structure of photosynthetic pigments probed by polarized two-dimensional electronic spectroscopy and ab initio calculations. Chem Sci 2019; 10:8143-8153. [PMID: 31857881 PMCID: PMC6836992 DOI: 10.1039/c9sc02329a] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Accepted: 07/02/2019] [Indexed: 12/29/2022] Open
Abstract
Bacteriochlorophyll a (Bchl a) and chlorophyll a (Chl a) play important roles as light absorbers in photosynthetic antennae and participate in the initial charge-separation steps in photosynthetic reaction centers. Despite decades of study, questions remain about the interplay of electronic and vibrational states within the Q-band and its effect on the photoexcited dynamics. Here we report results of polarized two-dimensional electronic spectroscopic measurements, performed on penta-coordinated Bchl a and Chl a and their interpretation based on state-of-the-art time-dependent density functional theory calculations and vibrational mode analysis for spectral shapes. We find that the Q-band of Bchl a is comprised of two independent bands, that are assigned following the Gouterman model to Q x and Q y states with orthogonal transition dipole moments. However, we measure the angle to be ∼75°, a finding that is confirmed by ab initio calculations. The internal conversion rate constant from Q x to Q y is found to be 11 ps-1. Unlike Bchl a, the Q-band of Chl a contains three distinct peaks with different polarizations. Ab initio calculations trace these features back to a spectral overlap between two electronic transitions and their vibrational replicas. The smaller energy gap and the mixing of vibronic states result in faster internal conversion rate constants of 38-50 ps-1. We analyze the spectra of penta-coordinated Bchl a and Chl a to highlight the interplay between low-lying vibronic states and their relationship to photoinduced relaxation. Our findings shed new light on the photoexcited dynamics in photosynthetic systems where these chromophores are primary pigments.
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Affiliation(s)
- Yin Song
- Department of Physics , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA .
| | - Alexander Schubert
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
- Department of Chemistry and Biochemistry , Kent State University , 1175 Risman Drive , Kent , OH 44242 , USA
| | - Elizabeth Maret
- Applied Physics Program , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA
| | - Ryan K Burdick
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
| | - Barry D Dunietz
- Department of Chemistry and Biochemistry , Kent State University , 1175 Risman Drive , Kent , OH 44242 , USA
| | - Eitan Geva
- Department of Chemistry , University of Michigan , 930 N University Ave , Ann Arbor , MI 48109 , USA
| | - Jennifer P Ogilvie
- Department of Physics , University of Michigan , 450 Church St , Ann Arbor , MI 48109 , USA .
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35
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Palm D, Agostini A, Pohland AC, Werwie M, Jaenicke E, Paulsen H. Stability of Water-Soluble Chlorophyll Protein (WSCP) Depends on Phytyl Conformation. ACS OMEGA 2019; 4:7971-7979. [PMID: 31459885 PMCID: PMC6648419 DOI: 10.1021/acsomega.9b00054] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/07/2019] [Accepted: 03/26/2019] [Indexed: 05/27/2023]
Abstract
Water-soluble chlorophyll proteins (WSCP) from Brassicaceae form homotetrameric chlorophyll (Chl)-protein complexes binding one Chl per apoprotein and no carotenoids. Despite the lack of photoprotecting pigments, the complex-bound Chls displays a remarkable stability toward photodynamic damage. On the basis of a mutational study, we show that not only the presence of the phytyls is necessary for photoprotection in WSCPs, as we previously demonstrated, but also is their correct conformation and localization. The extreme heat stability of WSCP also depends on the presence of the phytyl chains, confirming their relevance for the unusual stability of WSCP.
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Affiliation(s)
- Daniel
M. Palm
- Institute
of Molecular Physiology, Johannes Gutenberg-University, Johannes-von-Müller-Weg 6, 55128 Mainz, Germany
| | - Alessandro Agostini
- Institute
of Molecular Physiology, Johannes Gutenberg-University, Johannes-von-Müller-Weg 6, 55128 Mainz, Germany
| | - Anne-Christin Pohland
- Institute
of Molecular Physiology, Johannes Gutenberg-University, Johannes-von-Müller-Weg 6, 55128 Mainz, Germany
| | - Mara Werwie
- Institute
of Molecular Physiology, Johannes Gutenberg-University, Johannes-von-Müller-Weg 6, 55128 Mainz, Germany
| | - Elmar Jaenicke
- Institute
of Molecular Physiology, Johannes Gutenberg-University, Jakob-Welder-Weg 26, 55128 Mainz, Germany
| | - Harald Paulsen
- Institute
of Molecular Physiology, Johannes Gutenberg-University, Johannes-von-Müller-Weg 6, 55128 Mainz, Germany
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36
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Chojecki M, Rutkowska-Zbik D, Korona T. Dimerization Behavior of Methyl Chlorophyllide a as the Model of Chlorophyll a in the Presence of Water Molecules-Theoretical Study. J Chem Inf Model 2019; 59:2123-2140. [PMID: 30998013 DOI: 10.1021/acs.jcim.8b00984] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
A dimerization of methyl chlorophyllide a molecules and a role of water in stabilization and properties of methyl chlorophyllide a dimers were studied by means of symmetry-adapted perturbation theory (SAPT), functional-group SAPT (F-SAPT), density-functional theory (DFT), and time-dependent DFT approaches. The quantification of various types of interactions, such as π-π stacking, coordinative, and hydrogen bonding by applying the F-SAPT energy decomposition scheme shows the major role of the magnesium atom and the pheophytin macrocycle in the stability of the complex. The examination of interaction energy components with respect to a mutual orientation of monomers and in the presence or absence of water molecules reveals that the dispersion energy is the main binding factor of the interaction, while water molecules tend to weaken the attraction between methyl chlorophyllide a species. The dimerization can be seen in computed UV-vis spectra, and results in a doubling of the lowest peaks, as compared to the monomer spectrum, and in an intensity rise of the lowest 1.8 and 2.4 eV peaks at a cost of the 3.5 eV peaks for the majority of dimer configurations. The complexation of water has little effect on the peaks' position; however, it affects the overall shape of simulated spectra through changes in peak intensities, which is strongly dependent on the structure of the complex. The VCD spectra for the dimers show several characteristic features attributed to the interaction of substituting groups and/or water ligand attached to macrocycle groups belonging to different monomers. VCD is sensitive to the type of the formed dimer, but not to the number of water molecules it contains. This and several other features, as well as the differential UV-vis spectra, may serve as the indicator of the presence of a given dimer structure in the experiment.
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Affiliation(s)
- Michał Chojecki
- Faculty of Chemistry , University of Warsaw , ul. Pasteura 1 , 02-093 Warsaw , Poland
| | - Dorota Rutkowska-Zbik
- Jerzy Haber Institute of Catalysis and Surface Chemistry , Polish Academy of Sciences , ul. Niezapominajek 8 , 30-239 Cracow , Poland
| | - Tatiana Korona
- Faculty of Chemistry , University of Warsaw , ul. Pasteura 1 , 02-093 Warsaw , Poland
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37
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Sharma S, Uttam R, Sarika Bharti A, Uttam KN. Interaction of Zinc Oxide and Copper Oxide Nanoparticles with Chlorophyll: A Fluorescence Quenching Study. ANAL LETT 2019. [DOI: 10.1080/00032719.2018.1556277] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Affiliation(s)
- Sweta Sharma
- Department of Botany, University of Allahabad, Allahabad, Uttar Pradesh, India
| | - Rahul Uttam
- Centre of Material Science, IIDS, University of Allahabad, Allahabad, Uttar Pradesh, India
| | - Abhi Sarika Bharti
- Department of Botany, University of Allahabad, Allahabad, Uttar Pradesh, India
| | - K. N. Uttam
- Saha’s Spectroscopy Laboratory, Department of Physics, University of Allahabad, Allahabad, Uttar Pradesh, India
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38
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Metallated Macrocyclic Derivatives as a Hole – Transporting Materials for Perovskite Solar Cells. CHEM REC 2019; 19:2157-2177. [DOI: 10.1002/tcr.201800171] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2018] [Revised: 12/17/2018] [Accepted: 12/20/2018] [Indexed: 01/23/2023]
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39
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Ampomah‐Dwamena C, Thrimawithana AH, Dejnoprat S, Lewis D, Espley RV, Allan AC. A kiwifruit (Actinidia deliciosa) R2R3-MYB transcription factor modulates chlorophyll and carotenoid accumulation. THE NEW PHYTOLOGIST 2019; 221:309-325. [PMID: 30067292 PMCID: PMC6585760 DOI: 10.1111/nph.15362] [Citation(s) in RCA: 116] [Impact Index Per Article: 23.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2018] [Accepted: 06/11/2018] [Indexed: 05/10/2023]
Abstract
MYB transcription factors (TFs) regulate diverse plant developmental processes and understanding their roles in controlling pigment accumulation in fruit is important for developing new cultivars. In this study, we characterised kiwifruit TFMYB7, which was found to activate the promoter of the kiwifruit lycopene beta-cyclase (AdLCY-β) gene that plays a key role in the carotenoid biosynthetic pathway. To determine the role of MYB7, we analysed gene expression and metabolite profiles in Actinidia fruit which show different pigment profiles. The impact of MYB7 on metabolic biosynthetic pathways was then evaluated by overexpression in Nicotiana benthamiana followed by metabolite and gene expression analysis of the transformants. MYB7 was expressed in fruit that accumulated carotenoid and Chl pigments with high transcript levels associated with both pigments. Constitutive over-expression of MYB7, through transient or stable transformation of N. benthamiana, altered Chl and carotenoid pigment levels. MYB7 overexpression was associated with transcriptional activation of certain key genes involved in carotenoid biosynthesis, Chl biosynthesis, and other processes such as chloroplast and thylakoid membrane organization. Our results suggest that MYB7 plays a role in modulating carotenoid and Chl pigment accumulation in tissues through transcriptional activation of metabolic pathway genes.
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Affiliation(s)
- Charles Ampomah‐Dwamena
- The New Zealand Institute for Plant & Food Research Limited (PFR)Private Bag 92 169AucklandNew Zealand
| | - Amali H. Thrimawithana
- The New Zealand Institute for Plant & Food Research Limited (PFR)Private Bag 92 169AucklandNew Zealand
| | - Supinya Dejnoprat
- The New Zealand Institute for Plant & Food Research Limited (PFR)Private Bag 92 169AucklandNew Zealand
| | - David Lewis
- The New Zealand Institute for Plant & Food Research Limited (PFR)Private Bag 11600Palmerston North4442New Zealand
| | - Richard V. Espley
- The New Zealand Institute for Plant & Food Research Limited (PFR)Private Bag 92 169AucklandNew Zealand
| | - Andrew C. Allan
- The New Zealand Institute for Plant & Food Research Limited (PFR)Private Bag 92 169AucklandNew Zealand
- School of Biological SciencesUniversity of AucklandPrivate Bag 92019AucklandNew Zealand
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40
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Chlorophylls B formulated in nanostructured colloidal solutions: Interaction, spectroscopic, and photophysical studies. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2018.10.143] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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41
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Chen K, Roca M. Cooking effects on chlorophyll profile of the main edible seaweeds. Food Chem 2018; 266:368-374. [DOI: 10.1016/j.foodchem.2018.06.040] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2018] [Revised: 06/04/2018] [Accepted: 06/08/2018] [Indexed: 01/29/2023]
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42
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Absorption-energy calculations of chlorophyll a and b with an explicit solvent model. J Photochem Photobiol A Chem 2018. [DOI: 10.1016/j.jphotochem.2017.10.003] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
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43
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Saga Y, Miyagi K. Characterization of 3-Acetyl Chlorophyllaand 3-Acetyl ProtochlorophyllaAccommodated in the B800 Binding Sites of Photosynthetic Light-Harvesting Complex 2 in the Purple Photosynthetic BacteriumRhodoblastus acidophilus. Photochem Photobiol 2018; 94:698-704. [DOI: 10.1111/php.12919] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2018] [Accepted: 03/15/2018] [Indexed: 11/29/2022]
Affiliation(s)
- Yoshitaka Saga
- Department of Chemistry; Faculty of Science and Engineering; Kindai University; Higashi-Osaka, Osaka Japan
- Precursory Research for Embryonic Science and Technology; Japan Science and Technology Agency; Kawaguchi Saitama Japan
| | - Kanji Miyagi
- Department of Chemistry; Faculty of Science and Engineering; Kindai University; Higashi-Osaka, Osaka Japan
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44
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Polyakov IV, Khrenova MG, Moskovsky AA, Shabanov BM, Nemukhin AV. Towards first-principles calculation of electronic excitations in the ring of the protein-bound bacteriochlorophylls. Chem Phys 2018. [DOI: 10.1016/j.chemphys.2018.03.009] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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45
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Affiliation(s)
- Peter Schönfeld
- Institut für Biochemie und Zellbiologie; Leipziger Str. 44 39120 Magdeburg
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46
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Leiger K, Linnanto JM, Freiberg A. Vibronic Origin of the Q y Absorption Tail of Bacteriochlorophyll a Verified by Fluorescence Excitation Spectroscopy and Quantum Chemical Simulations. J Phys Chem Lett 2017; 8:4231-4235. [PMID: 28820595 DOI: 10.1021/acs.jpclett.7b01704] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
The long-wavelength tail of the lowest-energy Qy singlet absorption band of bacteriochlorophyll a in triethylamine peaking at 768.6 nm was examined by means of fluorescence excitation spectroscopy at ambient temperature of 22 ± 1 °C. The tail, usually considered a Gaussian, does in fact weaken quasi-exponentially, being clearly evident as far as 940 nm, nearly 2400 cm-1 (∼12 kBT) away from the absorption peak. Quantum chemical simulations identified vibronic transitions from the thermally populated normal modes and their overtones in the ground electronic state as the origin of this tail. Because energy transfer and relaxation processes generally depend on vibronic overlap integrals, these findings may have important implications on the interpretation of numerous photoinduced phenomena that involve bacteriochlorophyll and similar molecules, including photosynthesis.
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Affiliation(s)
- Kristjan Leiger
- Institute of Physics, University of Tartu , W. Ostwald Str. 1, Tartu 51011, Estonia
| | - Juha Matti Linnanto
- Institute of Physics, University of Tartu , W. Ostwald Str. 1, Tartu 51011, Estonia
| | - Arvi Freiberg
- Institute of Physics, University of Tartu , W. Ostwald Str. 1, Tartu 51011, Estonia
- Institute of Molecular and Cell Biology, University of Tartu , Riia 23, Tartu 51014, Estonia
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47
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Agostini A, Palm DM, Schmitt FJ, Albertini M, Valentin MD, Paulsen H, Carbonera D. An unusual role for the phytyl chains in the photoprotection of the chlorophylls bound to Water-Soluble Chlorophyll-binding Proteins. Sci Rep 2017; 7:7504. [PMID: 28790428 PMCID: PMC5548782 DOI: 10.1038/s41598-017-07874-6] [Citation(s) in RCA: 28] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2017] [Accepted: 06/30/2017] [Indexed: 01/16/2023] Open
Abstract
Water-Soluble Chlorophyll Proteins (WSCPs) from Brassicaceae are non-photosynthetic proteins which tetramerize upon binding four chlorophyll (Chl) molecules. The bound Chls are highly photostable, despite the lack of bound carotenoids known, in Chl-containing photosynthetic proteins, to act as singlet oxygen and Chl triplet (3Chl) quenchers. Although the physiological function of WSCPs is still unclear, it is likely to be related to their biochemical stability and their resistance to photodegradation. To get insight into the origin of this photostability, the properties of the 3Chl generated in WSCPs upon illumination were investigated. We found that, unlike the excited singlet states, which are excitonic states, the triplet state is localized on a single Chl molecule. Moreover, the lifetime of the 3Chl generated in WSCPs is comparable to that observed in other Chl-containing systems and is reduced in presence of oxygen. In contrast to previous observations, we found that WSCP actually photosensitizes singlet oxygen with an efficiency comparable to that of Chl in organic solvent. We demonstrated that the observed resistance to photooxidation depends on the conformation of the phytyl moieties, which in WSCP are interposed between the rings of Chl dimers, hindering the access of singlet oxygen to the oxidizable sites of the pigments.
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Affiliation(s)
- Alessandro Agostini
- Department of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy
- Institute of Molecular Physiology, Johannes Gutenberg-University, Johannes-von-Müller-Weg 6, 55128, Mainz, Germany
| | - Daniel M Palm
- Institute of Molecular Physiology, Johannes Gutenberg-University, Johannes-von-Müller-Weg 6, 55128, Mainz, Germany
| | - Franz-Josef Schmitt
- Institute of Chemistry, Technische Universität Berlin, Straße des 17, Juni 135, 10623, Berlin, Germany
| | - Marco Albertini
- Department of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy
| | - Marilena Di Valentin
- Department of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy
| | - Harald Paulsen
- Institute of Molecular Physiology, Johannes Gutenberg-University, Johannes-von-Müller-Weg 6, 55128, Mainz, Germany.
| | - Donatella Carbonera
- Department of Chemical Sciences, University of Padova, via Marzolo 1, 35131, Padova, Italy.
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48
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Bhattacharya A, Biswas P, Kar P, Roychoudhury P, Basu S, Ganguly S, Ghosh S, Panda K, Pal R, Dasgupta AK. Nitric oxide sensing by chlorophyll a. Anal Chim Acta 2017; 985:101-113. [PMID: 28864180 DOI: 10.1016/j.aca.2017.07.026] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2017] [Revised: 06/19/2017] [Accepted: 07/07/2017] [Indexed: 12/16/2022]
Abstract
Nitric oxide (NO) acts as a signalling molecule that has direct and indirect regulatory roles in various functional processes in biology, though in plant kingdom its role is relatively unexplored. One reason for this is the fact that sensing of NO is always challenging. There are very few probes that can classify the different NO species. The present paper proposes a simple but straightforward way for sensing different NO species using chlorophyll, the source of inspiration being hemoglobin that serves as NO sink in mammalian systems. The proposed method is able to classify NO from DETA-NONOate or (Z)-1-[N-(2-aminoethyl)-N-(2-ammonioethyl) amino] diazen-1-ium-1,2-diolate, nitrite, nitrate and S-nitrosothiol or SNO. This discrimination is carried out by chlorophyll a (chl a) at nano molar (nM) order of sensitivity and at 293 K-310 K. Molecular docking reveals the differential binding effects of NO and SNO with chlorophyll, the predicted binding affinity matching with the experimental observation. Additional experiments with a diverse range of cyanobacteria reveal that apart from the spectroscopic approach the proposed sensing module can be used in microscopic inspection of NO species. Binding of NO is sensitive to temperature and static magnetic field. This provides additional support for the involvement of the porphyrin ring structures to the NO sensing process. This also, broadens the scope of the sensing methods as hinted in the text.
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Affiliation(s)
- Abhishek Bhattacharya
- Department of Biochemistry, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Pranjal Biswas
- Department of Biochemistry, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Puranjoy Kar
- Department of Biochemistry, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Piya Roychoudhury
- Department of Botany, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Sankar Basu
- Department of Biochemistry, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Souradipta Ganguly
- Department of Biotechnology and Guha Centre for Genetic Engineering & Biotechnology, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Sanjay Ghosh
- Department of Biochemistry, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Koustubh Panda
- Department of Biotechnology and Guha Centre for Genetic Engineering & Biotechnology, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Ruma Pal
- Department of Botany, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India
| | - Anjan Kr Dasgupta
- Department of Biochemistry, University of Calcutta 35, Ballygunge Circular Road, Kolkata 700019, India.
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49
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Mizoguchi T, Isaji M, Yamano N, Harada J, Fujii R, Tamiaki H. Molecular Structures and Functions of Chlorophylls-a Esterified with Geranylgeranyl, Dihydrogeranylgeranyl, and Tetrahydrogeranylgeranyl Groups at the 17-Propionate Residue in a Diatom, Chaetoceros calcitrans. Biochemistry 2017. [PMID: 28627163 DOI: 10.1021/acs.biochem.7b00381] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
The 17-propionate ester group of chlorophyll(Chl)-a in some oxygenic phototrophs was investigated using HPLC. Chls-a esterified with partially dehydrogenated forms of a phytyl group were found in fully grown cells of a diatom, Chaetoceros calcitrans: geranylgeranyl (GG), dihydrogeranylgeranyl (DHGG), and tetrahydrogeranylgeranyl (THGG). Chls-a bearing such esterifying groups were reported to be found only in greening processes of higher plants, and thus these Chls-a have been thought to be biosynthetic precursors for phytylated Chl-a. Their molecular structures were unambiguously determined using 1H and 13C NMR spectroscopy and mass spectrometry. In particular, the positions of C═C double bonds in DHGG were identified at C2═C3, C6═C7, and C14═C15, and those in THGG were determined to be at C2═C3 and C14═C15. Notably, the present DHGG was different from the previously determined DHGG of bacteriochlorophyll-a in purple bacteria (C2═C3, C10═C11, and C14═C15). Moreover, thylakoid membranes as well as fucoxanthin-chlorophyll-a/c proteins called FCPs were isolated from the diatom, and their Chl-a compositions were analyzed. Chls-a esterified with GG, DHGG, and THGG were detected by HPLC, indicating that such Chls-a were not merely biosynthetic precursors, but photosynthetically active pigments.
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Affiliation(s)
- Tadashi Mizoguchi
- Graduate School of Life Sciences, Ritsumeikan University , Kusatsu, Shiga 525-8577, Japan
| | - Megumi Isaji
- Graduate School of Life Sciences, Ritsumeikan University , Kusatsu, Shiga 525-8577, Japan
| | | | - Jiro Harada
- Department of Medical Biochemistry, Kurume University School of Medicine , Kurume, Fukuoka 830-0011, Japan
| | | | - Hitoshi Tamiaki
- Graduate School of Life Sciences, Ritsumeikan University , Kusatsu, Shiga 525-8577, Japan
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Kim DY, Shinde S, Ghodake G. Colorimetric detection of magnesium (II) ions using tryptophan functionalized gold nanoparticles. Sci Rep 2017. [PMID: 28638065 PMCID: PMC5479790 DOI: 10.1038/s41598-017-04359-4] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022] Open
Abstract
The functional nanoparticles with specific molecular probe appear to be a promising approach for developing colorimetric nanosensor. In this work, we have synthesized tryptophan capped gold nanoparticles (AuNPs) and used to establish colorimetric detection of magnesium (Mg2+). The colorimetric response of the AuNPs toward Mg2+ was noticed with naked eyes, and spectral changes were monitored by using UV-Vis spectrophotometer. The detection response was rapid (less than 1 min), with a detection limit (LOD) about 0.2 µmol L−1. The proposed nanoprobe shows characteristic red-shift of the AuNPs at 620 nm and high selectivity for Mg2+ due to the binding affinity of the tryptophan with Mg2+. The real-time response of the UV-Vis spectrum was monitored at three different concentrations of Mg2+ (0.45, 0.50, and 0.55 µmol L−1). The AuNPs probe was suitable to provide a molecular platform for selective coordination with Mg2+ over Ca2+ ions, thus it could be facile to establish a practically viable sensing system. Furthermore, experimental results were confirmed to exhibit excellent linear curve for urine and serum samples spiked with Mg2+. Thus, this nanosensor is practically useful for the detection of Mg2+, without using expensive instruments, enzymes and/or DNA molecules.
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Affiliation(s)
- Dae-Young Kim
- Dongguk University-Seoul, Department of Biological and Environmental Science, College of Life Science and Biotechnology, Dongguk-ro, Ilsandong-gu, Goyang-si, Gyeonggi-do, South Korea
| | - Surendra Shinde
- Dongguk University-Seoul, Department of Biological and Environmental Science, College of Life Science and Biotechnology, Dongguk-ro, Ilsandong-gu, Goyang-si, Gyeonggi-do, South Korea
| | - Gajanan Ghodake
- Dongguk University-Seoul, Department of Biological and Environmental Science, College of Life Science and Biotechnology, Dongguk-ro, Ilsandong-gu, Goyang-si, Gyeonggi-do, South Korea.
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