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For: Schlüter A, Krause L, Szczepanowski R, Goesmann A, Pühler A. Genetic diversity and composition of a plasmid metagenome from a wastewater treatment plant. J Biotechnol 2008;136:65-76. [PMID: 18603322 DOI: 10.1016/j.jbiotec.2008.03.017] [Citation(s) in RCA: 72] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2008] [Revised: 03/14/2008] [Accepted: 03/31/2008] [Indexed: 11/24/2022]
Number Cited by Other Article(s)
1
Galarde-López M, Velazquez-Meza ME, Godoy-Lozano EE, Carrillo-Quiroz BA, Cornejo-Juárez P, Sassoé-González A, Ponce-de-León A, Saturno-Hernández P, Alpuche-Aranda CM. Presence and Persistence of ESKAPEE Bacteria before and after Hospital Wastewater Treatment. Microorganisms 2024;12:1231. [PMID: 38930614 PMCID: PMC11206169 DOI: 10.3390/microorganisms12061231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2024] [Revised: 06/02/2024] [Accepted: 06/08/2024] [Indexed: 06/28/2024]  Open
2
Goswami A, Adkins-Jablonsky SJ, Barreto Filho MM, Shilling MD, Dawson A, Heiser S, O’Connor A, Walker M, Roberts Q, Morris JJ. Heavy Metal Pollution Impacts Soil Bacterial Community Structure and Antimicrobial Resistance at the Birmingham 35th Avenue Superfund Site. Microbiol Spectr 2023;11:e0242622. [PMID: 36951567 PMCID: PMC10101053 DOI: 10.1128/spectrum.02426-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Accepted: 02/23/2023] [Indexed: 03/24/2023]  Open
3
Perez MF, Saona LA, Farías ME, Poehlein A, Meinhardt F, Daniel R, Dib JR. Assessment of the plasmidome of an extremophilic microbial community from the Diamante Lake, Argentina. Sci Rep 2021;11:21459. [PMID: 34728656 PMCID: PMC8563766 DOI: 10.1038/s41598-021-00753-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2021] [Accepted: 10/15/2021] [Indexed: 12/02/2022]  Open
4
Law A, Solano O, Brown CJ, Hunter SS, Fagnan M, Top EM, Stalder T. Biosolids as a Source of Antibiotic Resistance Plasmids for Commensal and Pathogenic Bacteria. Front Microbiol 2021;12:606409. [PMID: 33967971 PMCID: PMC8098119 DOI: 10.3389/fmicb.2021.606409] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Accepted: 03/09/2021] [Indexed: 12/05/2022]  Open
5
Garner E, Davis BC, Milligan E, Blair MF, Keenum I, Maile-Moskowitz A, Pan J, Gnegy M, Liguori K, Gupta S, Prussin AJ, Marr LC, Heath LS, Vikesland PJ, Zhang L, Pruden A. Next generation sequencing approaches to evaluate water and wastewater quality. WATER RESEARCH 2021;194:116907. [PMID: 33610927 DOI: 10.1016/j.watres.2021.116907] [Citation(s) in RCA: 44] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2020] [Revised: 01/15/2021] [Accepted: 02/03/2021] [Indexed: 05/24/2023]
6
Priya P, Aneesh B, Harikrishnan K. Genomics as a potential tool to unravel the rhizosphere microbiome interactions on plant health. J Microbiol Methods 2021;185:106215. [PMID: 33839214 DOI: 10.1016/j.mimet.2021.106215] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2020] [Revised: 04/05/2021] [Accepted: 04/06/2021] [Indexed: 12/12/2022]
7
Rios Miguel AB, Jetten MS, Welte CU. The role of mobile genetic elements in organic micropollutant degradation during biological wastewater treatment. WATER RESEARCH X 2020;9:100065. [PMID: 32984801 PMCID: PMC7494797 DOI: 10.1016/j.wroa.2020.100065] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Revised: 08/19/2020] [Accepted: 08/28/2020] [Indexed: 05/24/2023]
8
Jebri S, Rahmani F, Hmaied F. Bacteriophages as antibiotic resistance genes carriers in agro-food systems. J Appl Microbiol 2020;130:688-698. [PMID: 32916015 DOI: 10.1111/jam.14851] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Accepted: 09/04/2020] [Indexed: 12/14/2022]
9
Piotrowska M, Dziewit L, Ostrowski R, Chmielowska C, Popowska M. Molecular Characterization and Comparative Genomics of IncQ-3 Plasmids Conferring Resistance to Various Antibiotics Isolated from a Wastewater Treatment Plant in Warsaw (Poland). Antibiotics (Basel) 2020;9:antibiotics9090613. [PMID: 32957637 PMCID: PMC7557826 DOI: 10.3390/antibiotics9090613] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2020] [Revised: 09/15/2020] [Accepted: 09/16/2020] [Indexed: 11/16/2022]  Open
10
Widespread transfer of mobile antibiotic resistance genes within individual gut microbiomes revealed through bacterial Hi-C. Nat Commun 2020;11:4379. [PMID: 32873785 PMCID: PMC7463002 DOI: 10.1038/s41467-020-18164-7] [Citation(s) in RCA: 89] [Impact Index Per Article: 22.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Accepted: 08/06/2020] [Indexed: 01/13/2023]  Open
11
Perez MF, Kurth D, Farías ME, Soria MN, Castillo Villamizar GA, Poehlein A, Daniel R, Dib JR. First Report on the Plasmidome From a High-Altitude Lake of the Andean Puna. Front Microbiol 2020;11:1343. [PMID: 32655530 PMCID: PMC7324554 DOI: 10.3389/fmicb.2020.01343] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2020] [Accepted: 05/26/2020] [Indexed: 12/11/2022]  Open
12
Dissemination prevention of antibiotic resistant and facultative pathogenic bacteria by ultrafiltration and ozone treatment at an urban wastewater treatment plant. Sci Rep 2019;9:12843. [PMID: 31492933 PMCID: PMC6731226 DOI: 10.1038/s41598-019-49263-1] [Citation(s) in RCA: 53] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Accepted: 08/22/2019] [Indexed: 11/10/2022]  Open
13
Rivas-Marín E, Devos DP. The Paradigms They Are a-Changin': past, present and future of PVC bacteria research. Antonie van Leeuwenhoek 2017;111:785-799. [PMID: 29058138 PMCID: PMC5945725 DOI: 10.1007/s10482-017-0962-z] [Citation(s) in RCA: 41] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/16/2017] [Accepted: 10/10/2017] [Indexed: 11/22/2022]
14
Delforno TP, Lacerda Júnior GV, Noronha MF, Sakamoto IK, Varesche MBA, Oliveira VM. Microbial diversity of a full-scale UASB reactor applied to poultry slaughterhouse wastewater treatment: integration of 16S rRNA gene amplicon and shotgun metagenomic sequencing. Microbiologyopen 2017;6. [PMID: 28229558 PMCID: PMC5458456 DOI: 10.1002/mbo3.443] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2016] [Revised: 11/28/2016] [Accepted: 12/07/2016] [Indexed: 02/06/2023]  Open
15
Marbouty M, Baudry L, Cournac A, Koszul R. Scaffolding bacterial genomes and probing host-virus interactions in gut microbiome by proximity ligation (chromosome capture) assay. SCIENCE ADVANCES 2017;3:e1602105. [PMID: 28232956 PMCID: PMC5315449 DOI: 10.1126/sciadv.1602105] [Citation(s) in RCA: 80] [Impact Index Per Article: 11.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2016] [Accepted: 01/09/2017] [Indexed: 05/05/2023]
16
Tripathi V, Tripathi P. Antibiotic Resistance Genes: An Emerging Environmental Pollutant. PERSPECTIVES IN ENVIRONMENTAL TOXICOLOGY 2017. [DOI: 10.1007/978-3-319-46248-6_9] [Citation(s) in RCA: 15] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
17
Hladilek MD, Gaines KF, Novak JM, Collard DA, Johnson DB, Canam T. Microbial community structure of a freshwater system receiving wastewater effluent. ENVIRONMENTAL MONITORING AND ASSESSMENT 2016;188:626. [PMID: 27761851 DOI: 10.1007/s10661-016-5630-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2016] [Accepted: 10/05/2016] [Indexed: 06/06/2023]
18
Gillings MR. Lateral gene transfer, bacterial genome evolution, and the Anthropocene. Ann N Y Acad Sci 2016;1389:20-36. [DOI: 10.1111/nyas.13213] [Citation(s) in RCA: 82] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2016] [Revised: 07/20/2016] [Accepted: 07/28/2016] [Indexed: 11/26/2022]
19
The Effect of Kanamycin and Tetracycline on Growth and Photosynthetic Activity of Two Chlorophyte Algae. BIOMED RESEARCH INTERNATIONAL 2016;2016:5656304. [PMID: 27747232 PMCID: PMC5055999 DOI: 10.1155/2016/5656304] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/20/2016] [Revised: 07/22/2016] [Accepted: 07/26/2016] [Indexed: 11/17/2022]
20
Arango-Argoty G, Singh G, Heath LS, Pruden A, Xiao W, Zhang L. MetaStorm: A Public Resource for Customizable Metagenomics Annotation. PLoS One 2016;11:e0162442. [PMID: 27632579 PMCID: PMC5025195 DOI: 10.1371/journal.pone.0162442] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2016] [Accepted: 08/23/2016] [Indexed: 02/01/2023]  Open
21
Root Exudation: The Ecological Driver of Hydrocarbon Rhizoremediation. AGRONOMY-BASEL 2016. [DOI: 10.3390/agronomy6010019] [Citation(s) in RCA: 66] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
22
McCall CA, Bent E, Jørgensen TS, Dunfield KE, Habash MB. Metagenomic Comparison of Antibiotic Resistance Genes Associated with Liquid and Dewatered Biosolids. JOURNAL OF ENVIRONMENTAL QUALITY 2016;45:463-470. [PMID: 27065392 DOI: 10.2134/jeq2015.05.0255] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
23
Genomic Analysis of Bacterial Outbreaks. Evol Biol 2016. [DOI: 10.1007/978-3-319-41324-2_13] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
24
Li X, Wang Y, Brown CJ, Yao F, Jiang Y, Top EM, Li H. Diversification of broad host range plasmids correlates with the presence of antibiotic resistance genes. FEMS Microbiol Ecol 2015;92:fiv151. [PMID: 26635412 DOI: 10.1093/femsec/fiv151] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 11/26/2015] [Indexed: 11/13/2022]  Open
25
Waldron LS, Gillings MR. Screening Foodstuffs for Class 1 Integrons and Gene Cassettes. J Vis Exp 2015:e52889. [PMID: 26132232 DOI: 10.3791/52889] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]  Open
26
Stöveken J, Singh R, Kolkenbrock S, Zakrzewski M, Wibberg D, Eikmeyer F, Pühler A, Schlüter A, Moerschbacher B. Successful heterologous expression of a novel chitinase identified by sequence analyses of the metagenome from a chitin-enriched soil sample. J Biotechnol 2015;201:60-8. [DOI: 10.1016/j.jbiotec.2014.09.010] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2014] [Revised: 08/29/2014] [Accepted: 09/09/2014] [Indexed: 12/20/2022]
27
Integrons: past, present, and future. Microbiol Mol Biol Rev 2015;78:257-77. [PMID: 24847022 DOI: 10.1128/mmbr.00056-13] [Citation(s) in RCA: 424] [Impact Index Per Article: 47.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]  Open
28
Li X, Top EM, Wang Y, Brown CJ, Yao F, Yang S, Jiang Y, Li H. The broad-host-range plasmid pSFA231 isolated from petroleum-contaminated sediment represents a new member of the PromA plasmid family. Front Microbiol 2015;5:777. [PMID: 25628616 PMCID: PMC4290620 DOI: 10.3389/fmicb.2014.00777] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2014] [Accepted: 12/18/2014] [Indexed: 11/13/2022]  Open
29
Plasmid-encoded tetracycline efflux pump protein alters bacterial stress responses and ecological fitness of Acinetobacter oleivorans. PLoS One 2014;9:e107716. [PMID: 25229538 PMCID: PMC4167995 DOI: 10.1371/journal.pone.0107716] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2014] [Accepted: 08/21/2014] [Indexed: 12/04/2022]  Open
30
Pyrosequencing reveals the inhibitory impact of chronic exposure to erythromycin on activated sludge bacterial community structure. Biochem Eng J 2014. [DOI: 10.1016/j.bej.2014.06.003] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
31
Sekar S, Zintchem AA, Keshri J, Kamika I, Momba MN. Bacterial profiling in brine samples of the Emalahleni Water Reclamation Plant, South Africa, using 454-pyrosequencing method. FEMS Microbiol Lett 2014;359:55-63. [DOI: 10.1111/1574-6968.12557] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2014] [Revised: 07/14/2014] [Accepted: 07/20/2014] [Indexed: 11/29/2022]  Open
32
Jørgensen TS, Xu Z, Hansen MA, Sørensen SJ, Hansen LH. Hundreds of circular novel plasmids and DNA elements identified in a rat cecum metamobilome. PLoS One 2014;9:e87924. [PMID: 24503942 PMCID: PMC3913684 DOI: 10.1371/journal.pone.0087924] [Citation(s) in RCA: 85] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2013] [Accepted: 12/30/2013] [Indexed: 01/09/2023]  Open
33
Hong H, Ko HJ, Choi IG, Park W. Previously undescribed plasmids recovered from activated sludge confer tetracycline resistance and phenotypic changes to Acinetobacter oleivorans DR1. MICROBIAL ECOLOGY 2014;67:369-379. [PMID: 24337108 DOI: 10.1007/s00248-013-0343-8] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/27/2013] [Accepted: 12/02/2013] [Indexed: 06/03/2023]
34
Varela AR, Manaia CM. Human health implications of clinically relevant bacteria in wastewater habitats. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2013;20:3550-3569. [PMID: 23508533 DOI: 10.1007/s11356-013-1594-0] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2012] [Accepted: 02/25/2013] [Indexed: 06/01/2023]
35
Rizzo L, Manaia C, Merlin C, Schwartz T, Dagot C, Ploy MC, Michael I, Fatta-Kassinos D. Urban wastewater treatment plants as hotspots for antibiotic resistant bacteria and genes spread into the environment: a review. THE SCIENCE OF THE TOTAL ENVIRONMENT 2013;447:345-60. [PMID: 23396083 DOI: 10.1016/j.scitotenv.2013.01.032] [Citation(s) in RCA: 1247] [Impact Index Per Article: 113.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/23/2012] [Revised: 01/08/2013] [Accepted: 01/08/2013] [Indexed: 05/20/2023]
36
Sentchilo V, Mayer AP, Guy L, Miyazaki R, Green Tringe S, Barry K, Malfatti S, Goessmann A, Robinson-Rechavi M, van der Meer JR. Community-wide plasmid gene mobilization and selection. ISME JOURNAL 2013;7:1173-86. [PMID: 23407308 PMCID: PMC3660673 DOI: 10.1038/ismej.2013.13] [Citation(s) in RCA: 85] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
37
Gillings MR. Evolutionary consequences of antibiotic use for the resistome, mobilome and microbial pangenome. Front Microbiol 2013;4:4. [PMID: 23386843 PMCID: PMC3560386 DOI: 10.3389/fmicb.2013.00004] [Citation(s) in RCA: 144] [Impact Index Per Article: 13.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2012] [Accepted: 01/03/2013] [Indexed: 12/16/2022]  Open
38
Hu M, Wang X, Wen X, Xia Y. Microbial community structures in different wastewater treatment plants as revealed by 454-pyrosequencing analysis. BIORESOURCE TECHNOLOGY 2012;117:72-9. [PMID: 22609716 DOI: 10.1016/j.biortech.2012.04.061] [Citation(s) in RCA: 135] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2012] [Revised: 04/17/2012] [Accepted: 04/18/2012] [Indexed: 05/20/2023]
39
Li L, Norman A, Hansen L, Sorensen S. Metamobilomics – expanding our knowledge on the pool of plasmid encoded traits in natural environments using high-throughput sequencing. Clin Microbiol Infect 2012;18 Suppl 4:5-7. [DOI: 10.1111/j.1469-0691.2012.03862.x] [Citation(s) in RCA: 33] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
40
Gillings MR, Stokes H. Are humans increasing bacterial evolvability? Trends Ecol Evol 2012;27:346-52. [DOI: 10.1016/j.tree.2012.02.006] [Citation(s) in RCA: 124] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2011] [Revised: 02/21/2012] [Accepted: 02/28/2012] [Indexed: 12/01/2022]
41
Rahube TO, Yost CK. Characterization of a mobile and multiple resistance plasmid isolated from swine manure and its detection in soil after manure application. J Appl Microbiol 2012;112:1123-33. [PMID: 22486928 DOI: 10.1111/j.1365-2672.2012.05301.x] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
42
Schmieder R, Edwards R. Insights into antibiotic resistance through metagenomic approaches. Future Microbiol 2012;7:73-89. [PMID: 22191448 DOI: 10.2217/fmb.11.135] [Citation(s) in RCA: 181] [Impact Index Per Article: 15.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]  Open
43
Silva CC, Hayden H, Sawbridge T, Mele P, Kruger RH, Rodrigues MVN, Costa GGL, Vidal RO, Sousa MP, Torres APR, Santiago VMJ, Oliveira VM. Phylogenetic and functional diversity of metagenomic libraries of phenol degrading sludge from petroleum refinery wastewater treatment system. AMB Express 2012;2:18. [PMID: 22452812 PMCID: PMC3366876 DOI: 10.1186/2191-0855-2-18] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2012] [Accepted: 03/27/2012] [Indexed: 01/24/2023]  Open
44
Eikmeyer F, Hadiati A, Szczepanowski R, Wibberg D, Schneiker-Bekel S, Rogers LM, Brown CJ, Top EM, Pühler A, Schlüter A. The complete genome sequences of four new IncN plasmids from wastewater treatment plant effluent provide new insights into IncN plasmid diversity and evolution. Plasmid 2012;68:13-24. [PMID: 22326849 DOI: 10.1016/j.plasmid.2012.01.011] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2011] [Revised: 11/16/2011] [Accepted: 01/20/2012] [Indexed: 10/14/2022]
45
Tamminen M, Virta M, Fani R, Fondi M. Large-scale analysis of plasmid relationships through gene-sharing networks. Mol Biol Evol 2011;29:1225-40. [PMID: 22130968 DOI: 10.1093/molbev/msr292] [Citation(s) in RCA: 75] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]  Open
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Ma Y, Paulsen IT, Palenik B. Analysis of two marine metagenomes reveals the diversity of plasmids in oceanic environments. Environ Microbiol 2011;14:453-66. [DOI: 10.1111/j.1462-2920.2011.02633.x] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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Zhang T, Zhang XX, Ye L. Plasmid metagenome reveals high levels of antibiotic resistance genes and mobile genetic elements in activated sludge. PLoS One 2011;6:e26041. [PMID: 22016806 PMCID: PMC3189950 DOI: 10.1371/journal.pone.0026041] [Citation(s) in RCA: 198] [Impact Index Per Article: 15.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2011] [Accepted: 09/16/2011] [Indexed: 11/19/2022]  Open
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Stokes HW, Gillings MR. Gene flow, mobile genetic elements and the recruitment of antibiotic resistance genes into Gram-negative pathogens. FEMS Microbiol Rev 2011;35:790-819. [PMID: 21517914 DOI: 10.1111/j.1574-6976.2011.00273.x] [Citation(s) in RCA: 372] [Impact Index Per Article: 28.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
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Manaia CM, Vaz-Moreira I, Nunes OC. Antibiotic Resistance in Waste Water and Surface Water and Human Health Implications. THE HANDBOOK OF ENVIRONMENTAL CHEMISTRY 2011. [DOI: 10.1007/698_2011_118] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/30/2023]
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Mobility of plasmids. Microbiol Mol Biol Rev 2010;74:434-52. [PMID: 20805406 DOI: 10.1128/mmbr.00020-10] [Citation(s) in RCA: 700] [Impact Index Per Article: 50.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]  Open
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