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Chavan J, Patil P, Patil A, Deshmukh A, Panari P, Mohite A, Lawand P, Yadav P, Bodhe M, Kadam A, Namdas D, Pawar B, Jadhav A, Shekhawat M, Santa-Catarina C. Salacia spp.: recent insights on biotechnological interventions and future perspectives. Appl Microbiol Biotechnol 2024; 108:200. [PMID: 38326604 PMCID: PMC10850189 DOI: 10.1007/s00253-023-12998-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2023] [Revised: 10/13/2023] [Accepted: 12/27/2023] [Indexed: 02/09/2024]
Abstract
The plants of the genus Salacia L. are the storehouse of several bioactive compounds, and are involved in treating human diseases and disorders. Hitherto, a number of reports have been published on in vitro biotechnology as well as microbial involvement in the improvement of Salacia spp. The present review provides comprehensive insights into biotechnological interventions such as tissue culture for plant propagation, in vitro cultures, and endophytic microbes for up-scaling the secondary metabolites and biological potential of Salacia spp. Other biotechnological interventions such as molecular markers and bio-nanomaterials for up-grading the prospective of Salacia spp. are also considered. The in vitro biotechnology of Salacia spp. is largely focused on plant regeneration, callus culture, cell suspension culture, somatic embryogenesis, and subsequent ex vitro establishment of the in vitro-raised plantlets. The compiled information on tissue cultural strategies, involvement of endophytes, molecular markers, and nanomaterials will assist the advanced research related to in vitro manipulation, domestication, and commercial cultivation of elite clones of Salacia spp. Moreover, the genetic diversity and other molecular-marker based assessments will aid in designing conservation policies as well as support upgrading and breeding initiatives for Salacia spp. KEY POINTS: • Salacia spp. plays a multifaceted role in human health and disease management. • Critical and updated assessment of tissue culture, endophytic microbes, metabolites, molecular markers, and bio-nanomaterials of Salacia spp. • Key shortcomings and future research directions for Salacia biotechnology.
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Affiliation(s)
- Jaykumar Chavan
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India.
| | - Priyanka Patil
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Avdhoot Patil
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Akshay Deshmukh
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Pallavi Panari
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Ashwini Mohite
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Pramod Lawand
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Pradnya Yadav
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Minal Bodhe
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Abhijit Kadam
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Dada Namdas
- Department of Botany, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Bandu Pawar
- Department of Microbiology, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Amol Jadhav
- Department of Microbiology, Yashavantrao Chavan Institute of Science (Autonomous), Lead College of Karmaveer Bhaurao Patil University, Satara, 415001, India
| | - Mahipal Shekhawat
- Plant Biotechnology Unit, Kanchi Mamunivar Government Institute for Postgraduate Studies and Research, Puducherry, 605008, India
| | - Claudette Santa-Catarina
- Laboratório de Biologia Celular E Tecidual (LBCT), Centro de Biociências E Biotecnologia (CBB), Universidade Estadual Do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego 2000, Campos Dos Goytacazes, RJ, 28013-602, Brazil
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Sati P, Sharma E, Dhyani P, Attri DC, Rana R, Kiyekbayeva L, Büsselberg D, Samuel SM, Sharifi-Rad J. Paclitaxel and its semi-synthetic derivatives: comprehensive insights into chemical structure, mechanisms of action, and anticancer properties. Eur J Med Res 2024; 29:90. [PMID: 38291541 PMCID: PMC10826257 DOI: 10.1186/s40001-024-01657-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Accepted: 01/11/2024] [Indexed: 02/01/2024] Open
Abstract
Cancer is a disease that can cause abnormal cell growth and can spread throughout the body. It is among the most significant causes of death worldwide, resulting in approx. 10 million deaths annually. Many synthetic anticancer drugs are available, but they often come with side effects and can interact negatively with other medications. Additionally, many chemotherapy drugs used for cancer treatment can develop resistance and harm normal cells, leading to dose-limiting side effects. As a result, finding effective cancer treatments and developing new drugs remains a significant challenge. However, plants are a potent source of natural products with the potential for cancer treatment. These biologically active compounds may be the basis for enhanced or less toxic derivatives. Herbal medicines/phytomedicines, or plant-based drugs, are becoming more popular in treating complicated diseases like cancer due to their effectiveness and are a particularly attractive option due to their affordability, availability, and lack of serious side effects. They have broad applicability and therapeutic efficacy, which has spurred scientific research into their potential as anticancer agents. This review focuses on Paclitaxel (PTX), a plant-based drug derived from Taxus sp., and its ability to treat specific tumors. PTX and its derivatives are effective against various cancer cell lines. Researchers can use this detailed information to develop effective and affordable treatments for cancer.
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Affiliation(s)
- Priyanka Sati
- Department of Biotechnology, Kumaun University, Bhimtal, Uttarakhand, India
| | - Eshita Sharma
- Department of Molecular Biology and Biochemistry, Guru Nanak Dev University, Amritsar, Punjab, India
| | - Praveen Dhyani
- Institute for Integrated Natural Sciences, University of Koblenz, Koblenz, Germany
| | - Dharam Chand Attri
- Department of Botany, Central University of Jammu, Rahya-Suchani (Bagla), Jammu and Kashmir, India
| | - Rohit Rana
- Department of Biology, Brandeis University, Waltham, MA, USA
| | - Lashyn Kiyekbayeva
- Department of Pharmaceutical Technology, Pharmaceutical School, Asfendiyarov Kazakh National Medical University, Almaty, Kazakhstan
| | - Dietrich Büsselberg
- Department of Physiology and Biophysics, Weill Cornell Medicine-Qatar, Education City, Qatar Foundation, P.O. Box 24144, Doha, Qatar.
| | - Samson Mathews Samuel
- Department of Physiology and Biophysics, Weill Cornell Medicine-Qatar, Education City, Qatar Foundation, P.O. Box 24144, Doha, Qatar.
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A Review on Medicinal Plants Having Anticancer Properties of Northeast India and Associated Endophytic Microbes and their Future in Medicinal Science. JOURNAL OF PURE AND APPLIED MICROBIOLOGY 2022. [DOI: 10.22207/jpam.16.3.57] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Human beings are affected by different diseases and suffer to different extents. Cancer is one of the major human disease and millions of people suffered from cancer and end their lives every year. Peoples are dependent on herbal medicines since prehistoric time especially from developing countries. It is very common to have different side effects of modern synthetic medicines; hence now-a-days importance of herbal medicines due to no or least side effects increases all parts of the world. But the major problems of using herbal medicines are that plants can produce very limited amount of medicinally important bioactive metabolites and they have very long growth periods. Therefore endophytes are the excellent alternative of plant derived metabolites. Endophytic microbes can synthesize exactly same type of metabolites as the plant produces. North East India is a treasure of plant resources; various types of medicinal plants are present in this region. Different types of indigenous tribes are inhabited in this region who used different plants in traditional system for treating various disease. But with increasing demand it is sometimes not sufficient to manage the demand of medicines, therefore for massive production endophytic study is crucial. In spite of having huge plant resources very limited endophytic studies are observed in this region. In this review, we studied different plants with their endophytes of NE India showing anticancer properties.
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Rai N, Kumari Keshri P, Verma A, Kamble SC, Mishra P, Barik S, Kumar Singh S, Gautam V. Plant associated fungal endophytes as a source of natural bioactive compounds. Mycology 2021; 12:139-159. [PMID: 34552808 PMCID: PMC8451683 DOI: 10.1080/21501203.2020.1870579] [Citation(s) in RCA: 46] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/19/2023] Open
Abstract
Endophytes are a potent source of bioactive compounds that mimic plant-based metabolites. The relationship of host plant and endophyte is significantly associated with alteration in fungal colonisation and the extraction of endophyte-derived bioactive compounds. Screening of fungal endophytes and their relationship with host plants is essential for the isolation of bioactive compounds. Numerous bioactive compounds with antioxidant, antimicrobial, anticancer, and immunomodulatory properties are known to be derived from fungal endophytes. Bioinformatics tools along with the latest techniques such as metabolomics, next-generation sequencing, and metagenomics multilocus sequence typing can potentially fill the gaps in fungal endophyte research. The current review article focuses on bioactive compounds derived from plant-associated fungal endophytes and their pharmacological importance. We conclude with the challenges and opportunities in the research area of fungal endophytes.
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Affiliation(s)
- Nilesh Rai
- Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi, India
| | - Priyanka Kumari Keshri
- Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi, India
| | - Ashish Verma
- Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi, India
| | - Swapnil C Kamble
- Department of Technology, Savitribai Phule Pune University, Ganeshkhind, Pune, India
| | - Pradeep Mishra
- Division of Biochemistry, Department of Medical Biochemistry and Biophysics, Karolinska Institute, Stockholm, Sweden
| | - Suvakanta Barik
- Chemical Engineering Discipline, Indian Institute of Technology Gandhinagar, Palaj, Gandhinagar, Gujarat, India
| | - Santosh Kumar Singh
- Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi, India
| | - Vibhav Gautam
- Centre of Experimental Medicine and Surgery, Institute of Medical Sciences, Banaras Hindu University, Varanasi, India
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Gakuubi MM, Munusamy M, Liang ZX, Ng SB. Fungal Endophytes: A Promising Frontier for Discovery of Novel Bioactive Compounds. J Fungi (Basel) 2021; 7:786. [PMID: 34682208 PMCID: PMC8538612 DOI: 10.3390/jof7100786] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2021] [Revised: 09/10/2021] [Accepted: 09/16/2021] [Indexed: 12/13/2022] Open
Abstract
For years, fungi have served as repositories of bioactive secondary metabolites that form the backbone of many existing drugs. With the global rise in infections associated with antimicrobial resistance, in addition to the growing burden of non-communicable disease, such as cancer, diabetes and cardiovascular ailments, the demand for new drugs that can provide an improved therapeutic outcome has become the utmost priority. The exploration of microbes from understudied and specialized niches is one of the promising ways of discovering promising lead molecules for drug discovery. In recent years, a special class of plant-associated fungi, namely, fungal endophytes, have emerged as an important source of bioactive compounds with unique chemistry and interesting biological activities. The present review focuses on endophytic fungi and their classification, rationale for selection and prioritization of host plants for fungal isolation and examples of strategies that have been adopted to induce the activation of cryptic biosynthetic gene clusters to enhance the biosynthetic potential of fungal endophytes.
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Affiliation(s)
- Martin Muthee Gakuubi
- Singapore Institute of Food and Biotechnology Innovation (SIFBI), Agency for Science, Technology and Research (A*STAR), 31 Biopolis Way, #01-02 Nanos, Singapore 138669, Singapore; (M.M.G.); (M.M.)
- School of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore;
| | - Madhaiyan Munusamy
- Singapore Institute of Food and Biotechnology Innovation (SIFBI), Agency for Science, Technology and Research (A*STAR), 31 Biopolis Way, #01-02 Nanos, Singapore 138669, Singapore; (M.M.G.); (M.M.)
| | - Zhao-Xun Liang
- School of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore;
| | - Siew Bee Ng
- Singapore Institute of Food and Biotechnology Innovation (SIFBI), Agency for Science, Technology and Research (A*STAR), 31 Biopolis Way, #01-02 Nanos, Singapore 138669, Singapore; (M.M.G.); (M.M.)
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Dwibedi V, Saxena S. Effect of precursor feeding, dietary supplementation, chemical elicitors and co-culturing on resveratrol production by Arcopilus aureus. Prep Biochem Biotechnol 2021; 52:404-412. [PMID: 34374634 DOI: 10.1080/10826068.2021.1955709] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]
Abstract
Resveratrol is an important stilbene, initially identified from red wine possessing immense therapeutic, cosmeceutical and nutraceutical applications. In the present study, endophytic fungus Arcopilus aureus(#12VVLMP) which produces resveratrol extracellularly was selected as a candidate for epigenetic modulation using natural supplements, precursor feeding, chemical elicitors and co-culturing to enhance resveratrol production. The present study highlighted the role of natural supplements i.e. grape seed extract and grape skin extract which constitute grape pomace to enhance resveratrol production by 27.7 and 13.65% respectively. Co-culturing also impacted the resveratrol production by A. aureus, enhancing it by 9.4%. Chemical elicitors and precursor feeding did not induce significant enhancement in resveratrol production. Enhancement of anti-oxidant effect was also observed in the case of use of natural supplements assayed by DPPH and ABTS• radical scavenging assays. Similarly anti-staphylococcal and anti-candida activities were potentially higher when natural supplements were used followed by co-culturing. These findings indicate that the use of natural supplement which is a by-product of wine industry may be used as a modulator of resveratrol production by A. aureus. This shall lead to a cost-effective fermentation process of resveratrol production, the global demand of which is continuously increasing.
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Affiliation(s)
- Vagish Dwibedi
- Department of Biotechnology, Thapar Institute of Engineering and Technology, Patiala, Punjab, India
| | - Sanjai Saxena
- Department of Biotechnology, Thapar Institute of Engineering and Technology, Patiala, Punjab, India
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Cadamuro RD, da Silveira Bastos IMA, Silva IT, da Cruz ACC, Robl D, Sandjo LP, Alves S, Lorenzo JM, Rodríguez-Lázaro D, Treichel H, Steindel M, Fongaro G. Bioactive Compounds from Mangrove Endophytic Fungus and Their Uses for Microorganism Control. J Fungi (Basel) 2021; 7:455. [PMID: 34200444 PMCID: PMC8228968 DOI: 10.3390/jof7060455] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Revised: 05/31/2021] [Accepted: 06/03/2021] [Indexed: 12/15/2022] Open
Abstract
Mangroves are ecosystems with unique characteristics due to the high salinity and amount of organic matter that house a rich biodiversity. Fungi have aroused much interest as they are an important natural source for the discovery of new bioactive compounds, with potential biotechnological and pharmacological interest. This review aims to highlight endophytic fungi isolated from mangrove plant species and the isolated bioactive compounds and their bioactivity against protozoa, bacteria and pathogenic viruses. Knowledge about this type of ecosystem is of great relevance for its preservation and as a source of new molecules for the control of pathogens that may be of importance for human, animal and environmental health.
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Affiliation(s)
- Rafael Dorighello Cadamuro
- Department of Microbiology, Immunology, and Parasitology, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil; (R.D.C.); (I.M.A.d.S.B.); (I.T.S.); (A.C.C.d.C.); (D.R.); (M.S.)
| | - Isabela Maria Agustini da Silveira Bastos
- Department of Microbiology, Immunology, and Parasitology, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil; (R.D.C.); (I.M.A.d.S.B.); (I.T.S.); (A.C.C.d.C.); (D.R.); (M.S.)
| | - Izabella Thais Silva
- Department of Microbiology, Immunology, and Parasitology, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil; (R.D.C.); (I.M.A.d.S.B.); (I.T.S.); (A.C.C.d.C.); (D.R.); (M.S.)
- Department of Pharmaceutical Sciences, Federal University Santa Catarina, Florianopolis 88040-900, SC, Brazil
| | - Ariadne Cristiane Cabral da Cruz
- Department of Microbiology, Immunology, and Parasitology, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil; (R.D.C.); (I.M.A.d.S.B.); (I.T.S.); (A.C.C.d.C.); (D.R.); (M.S.)
- Department of Dentistry, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil
| | - Diogo Robl
- Department of Microbiology, Immunology, and Parasitology, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil; (R.D.C.); (I.M.A.d.S.B.); (I.T.S.); (A.C.C.d.C.); (D.R.); (M.S.)
| | - Louis Pergaud Sandjo
- Department of Chemistry, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil;
| | - Sergio Alves
- Laboratory of Biochemistry and Genetics, Federal University of Fronteira Sul, Chapecó 89802-112, SC, Brazil;
| | - Jose M. Lorenzo
- Centro Tecnológico de la Carne de Galicia, Avd. Galicia n° 4, Parque Tecnológico de Galicia, San Cibrao das Viñas, 32900 Ourense, Spain
- Área de Tecnología de los Alimentos, Facultad de Ciencias de Ourense, Universidad de Vigo, 32004 Ourense, Spain
| | | | - Helen Treichel
- Laboratory of Microbiology and Bioprocess, Federal University of Fronteira Sul, Erechim 99700-000, RS, Brazil;
| | - Mário Steindel
- Department of Microbiology, Immunology, and Parasitology, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil; (R.D.C.); (I.M.A.d.S.B.); (I.T.S.); (A.C.C.d.C.); (D.R.); (M.S.)
| | - Gislaine Fongaro
- Department of Microbiology, Immunology, and Parasitology, Federal University of Santa Catarina, Florianópolis 88040-900, SC, Brazil; (R.D.C.); (I.M.A.d.S.B.); (I.T.S.); (A.C.C.d.C.); (D.R.); (M.S.)
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Daley SK, Cordell GA. Biologically Significant and Recently Isolated Alkaloids from Endophytic Fungi. JOURNAL OF NATURAL PRODUCTS 2021; 84:871-897. [PMID: 33534564 DOI: 10.1021/acs.jnatprod.0c01195] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
A selection of the established and recently characterized alkaloids from the exploration of plant- and some marine-associated endophytic fungi is reviewed, with reference to alkaloids of biological significance.
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Affiliation(s)
| | - Geoffrey A Cordell
- Natural Products Inc., Evanston, Illinois 60202, United States
- Department of Pharmaceutics, College of Pharmacy, University of Florida, Gainesville, Florida 32610, United States
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Gupta S, Chaturvedi P, Kulkarni MG, Van Staden J. A critical review on exploiting the pharmaceutical potential of plant endophytic fungi. Biotechnol Adv 2020; 39:107462. [DOI: 10.1016/j.biotechadv.2019.107462] [Citation(s) in RCA: 94] [Impact Index Per Article: 23.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2019] [Revised: 09/22/2019] [Accepted: 10/22/2019] [Indexed: 02/08/2023]
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Kumar P, Singh B, Thakur V, Thakur A, Thakur N, Pandey D, Chand D. Hyper-production of taxol from Aspergillus fumigatus, an endophytic fungus isolated from Taxus sp. of the Northern Himalayan region. ACTA ACUST UNITED AC 2019; 24:e00395. [PMID: 31799144 PMCID: PMC6881681 DOI: 10.1016/j.btre.2019.e00395] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2019] [Revised: 11/04/2019] [Accepted: 11/06/2019] [Indexed: 12/01/2022]
Abstract
Taxol® (generic name Paclitaxel) is a chemotherapeutic drug, effective against head, neck, breast, lung, bladder, ovary, and cervix cancers. Rising demands in chemotherapy and limited supply of natural taxol have ultimately increased the cost of the drug. Semi synthesis using taxol precursors is not able to meet the global supply and has intensified the need to find alternative ways of taxol production. In the present study, 34 different endophytes were isolated from Taxus sp. collected from Shimla, Himachal Pradesh (India). Primary screening of taxol-producing fungi was carried out based on the presence of dbat gene, essential for the taxol biosynthetic pathway. A fungal isolate TPF-06 was screened to be a taxol-producing strain based on the PCR amplification results. It was characterized and identified as Aspergillus fumigatus by 18S rRNA (Accession No. KU-837249). Multiple sequence alignment (MSA) of nuclear ribosomal internal transcribed spacer (ITS) region and phylogenetic analysis confirmed that strain belonged to A. fumigatus clade (Accession No. MF-374798) and is endophytic in nature. Presence of taxol was detected and quantified by High-Performance Liquid Chromatography (HPLC) and characterized by using Thin Layer Chromatography (TLC), Ultraviolet (UV) spectroscopy, Mass spectrometry (MS), Fourier-Transform Infrared Spectroscopy (FTIR) and Nuclear Magnetic Resonance (NMR) spectroscopy. Microbial fermentation in the S7 medium yielded 1.60 g/L of taxol, which to the best of our knowledge is the highest taxol production from an endophytic fungus. Findings of the present study suggest that the A. fumigatus is an excellent alternate source for taxol supply, and it may become a highly potent strain on a commercial scale. The involvement of dbat gene in A. fumigatus KU-837249 strain further suggested a way of increasing taxol yield in fungi by medium engineering and recombinant DNA technology in the future.
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Key Words
- AIDS, Acquired Immuno-Deficiency Syndrome
- Aspergillus fumigatus
- BLAST, Basic Local Alignment Search Tool
- Cancer
- DNA, Deoxyribose Nucleic Acid
- Endophytes
- FTIR, Fourier Transform Infrared Spectroscopy
- HPLC, High Performance Liquid Chromatography
- ITS, Internal Transcribed Spacer
- MEGA, Molecular Evolutionary Genetics Analysis 7
- MMA, Modified Mycological Agar
- MS, Mass Spectroscopy
- NMR, Nuclear Magnetic Resonance
- PCR, Polymerase Chain Reaction
- TLC, Thin Layer Chromatography
- Taxol
- Taxus sp.
- UV, Ultra-Violet
- bapt, baccatin III-aminophenylpropanoyl-13-O-transferase
- dbat, 10-deacetylbaccatin III-10-O-acetyl transferase
- ts, taxadiene synthase
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Affiliation(s)
- Pradeep Kumar
- Department of Biotechnology, Himachal Pradesh University, Shimla, Himachal Pradesh, India.,Faculty of Applied Sciences and Biotechnology, Shoolini University, Solan, Himachal Pradesh, India
| | - Balwant Singh
- Department of Biotechnology, Himachal Pradesh University, Shimla, Himachal Pradesh, India
| | - Vikram Thakur
- Department of Biotechnology, Himachal Pradesh University, Shimla, Himachal Pradesh, India
| | - Abhishek Thakur
- Department of Biotechnology, Himachal Pradesh University, Shimla, Himachal Pradesh, India
| | - Nandita Thakur
- Department of Biotechnology, Himachal Pradesh University, Shimla, Himachal Pradesh, India
| | - Deepak Pandey
- Department of Reproductive Biology, All India Institute of Medical Sciences, Delhi, India
| | - Duni Chand
- Department of Biotechnology, Himachal Pradesh University, Shimla, Himachal Pradesh, India
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Andrade HFD, Araújo LCAD, Santos BSD, Paiva PMG, Napoleão TH, Correia MTDS, Oliveira MBMD, Lima GMDS, Ximenes RM, Silva TDD, Silva GRD, Silva MVD. Screening of endophytic fungi stored in a culture collection for taxol production. Braz J Microbiol 2018; 49 Suppl 1:59-63. [PMID: 30174203 PMCID: PMC6328807 DOI: 10.1016/j.bjm.2018.06.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Revised: 05/25/2018] [Accepted: 06/06/2018] [Indexed: 12/20/2022] Open
Abstract
In this work, four isolates of endophytic fungi (Alternaria alternata, Colletotrichum gloesporioides, Glomerella cingulata and Nigrospora sphaerica), deposited in the culture collection 'University Recife Mycologia' (URM) at the Universidade Federal de Pernambuco, were characterized for the genes ITS 1 and 4 (region 5.8 S) and evaluated for taxol production.
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Affiliation(s)
| | | | - Bruno Souza Dos Santos
- Universidade Federal de Pernambuco, Centro de Biociências, Departamento de Bioquímica, Recife, PE, Brazil
| | | | - Thiago Henrique Napoleão
- Universidade Federal de Pernambuco, Centro de Biociências, Departamento de Bioquímica, Recife, PE, Brazil
| | | | | | | | - Rafael Matos Ximenes
- Universidade Federal de Pernambuco, Centro de Biociências, Departamento de Antibióticos, Recife, PE, Brazil
| | | | - Girliane Regina da Silva
- Universidade Federal Rural de Pernambuco, Centro de Apoio à Pesquisa (CENAPESQ), Recife, PE, Brazil
| | - Márcia Vanusa da Silva
- Universidade Federal de Pernambuco, Centro de Biociências, Departamento de Bioquímica, Recife, PE, Brazil
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Chandra Mohana N, Yashavantha Rao H, Rakshith D, Mithun P, Nuthan B, Satish S. Omics based approach for biodiscovery of microbial natural products in antibiotic resistance era. J Genet Eng Biotechnol 2018; 16:1-8. [PMID: 30647697 PMCID: PMC6296576 DOI: 10.1016/j.jgeb.2018.01.006] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2017] [Revised: 01/25/2018] [Accepted: 01/30/2018] [Indexed: 01/01/2023]
Abstract
The need for a new antibiotic pipeline to confront threat imposed by resistant pathogens has become a major global concern for human health. To confront the challenge there is a need for discovery and development of new class of antibiotics. Nature which is considered treasure trove, there is re-emerged interest in exploring untapped microbial to yield novel molecules, due to their wide array of negative effects associated with synthetic drugs. Natural product researchers have developed many new techniques over the past few years for developing diverse compounds of biopotential. Taking edge in the advancement of genomics, genetic engineering, in silico drug design, surface modification, scaffolds, pharmacophores and target-based approach is necessary. These techniques have been economically sustainable and also proven efficient in natural product discovery. This review will focus on recent advances in diverse discipline approach from integrated Bioinformatics predictions, genetic engineering and medicinal chemistry for the synthesis of natural products vital for the discovery of novel antibiotics having potential application.
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Affiliation(s)
- N. Chandra Mohana
- Microbial Drugs Laboratory, Department of Studies in Microbiology, Manasagangotri, University of Mysore, Mysore 570006, Karnataka, India
| | - H.C. Yashavantha Rao
- Microbial Drugs Laboratory, Department of Studies in Microbiology, Manasagangotri, University of Mysore, Mysore 570006, Karnataka, India
| | - D. Rakshith
- Microbial Drugs Laboratory, Department of Studies in Microbiology, Manasagangotri, University of Mysore, Mysore 570006, Karnataka, India
| | - P.R. Mithun
- Department of Life Sciences, Christ University, Bengaluru 560029, Karnataka, India
| | - B.R. Nuthan
- Microbial Drugs Laboratory, Department of Studies in Microbiology, Manasagangotri, University of Mysore, Mysore 570006, Karnataka, India
| | - S. Satish
- Microbial Drugs Laboratory, Department of Studies in Microbiology, Manasagangotri, University of Mysore, Mysore 570006, Karnataka, India
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Uzma F, Mohan CD, Hashem A, Konappa NM, Rangappa S, Kamath PV, Singh BP, Mudili V, Gupta VK, Siddaiah CN, Chowdappa S, Alqarawi AA, Abd Allah EF. Endophytic Fungi-Alternative Sources of Cytotoxic Compounds: A Review. Front Pharmacol 2018; 9:309. [PMID: 29755344 PMCID: PMC5932204 DOI: 10.3389/fphar.2018.00309] [Citation(s) in RCA: 114] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2017] [Accepted: 03/16/2018] [Indexed: 12/29/2022] Open
Abstract
Cancer is a major cause of death worldwide, with an increasing number of cases being reported annually. The elevated rate of mortality necessitates a global challenge to explore newer sources of anticancer drugs. Recent advancements in cancer treatment involve the discovery and development of new and improved chemotherapeutics derived from natural or synthetic sources. Natural sources offer the potential of finding new structural classes with unique bioactivities for cancer therapy. Endophytic fungi represent a rich source of bioactive metabolites that can be manipulated to produce desirable novel analogs for chemotherapy. This review offers a current and integrative account of clinically used anticancer drugs such as taxol, podophyllotoxin, camptothecin, and vinca alkaloids in terms of their mechanism of action, isolation from endophytic fungi and their characterization, yield obtained, and fungal strain improvement strategies. It also covers recent literature on endophytic fungal metabolites from terrestrial, mangrove, and marine sources as potential anticancer agents and emphasizes the findings for cytotoxic bioactive compounds tested against specific cancer cell lines.
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Affiliation(s)
- Fazilath Uzma
- Microbial Metabolite Research Laboratory, Department of Microbiology and Biotechnology, Bangalore University, Bangalore, India
| | - Chakrabhavi D Mohan
- Department of Studies in Molecular Biology, University of Mysore, Mysore, India
| | - Abeer Hashem
- Botany and Microbiology Department, College of Science, King Saud University, Riyadh, Saudi Arabia
| | | | - Shobith Rangappa
- Adichunchanagiri Institute for Molecular Medicine, BG Nagara, Mandya, India
| | - Praveen V Kamath
- Microbial Metabolite Research Laboratory, Department of Microbiology and Biotechnology, Bangalore University, Bangalore, India
| | - Bhim P Singh
- Molecular Microbiology and Systematics Laboratory, Department of Biotechnology, Mizoram University, Aizawl, India
| | - Venkataramana Mudili
- Microbiology Division, DRDO-BU-Centre for Life sciences, Bharathiar University, Coimbatore, India
| | - Vijai K Gupta
- Department of Chemistry and Biotechnology, ERA Chair of Green Chemistry, School of Science, Tallinn University of Technology, Tallinn, Estonia
| | - Chandra N Siddaiah
- Department of Studies in Biotechnology, University of Mysore, Mysore, India
| | - Srinivas Chowdappa
- Microbial Metabolite Research Laboratory, Department of Microbiology and Biotechnology, Bangalore University, Bangalore, India
| | - Abdulaziz A Alqarawi
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, Riyadh, Saudi Arabia
| | - Elsayed F Abd Allah
- Plant Production Department, College of Food and Agricultural Sciences, King Saud University, Riyadh, Saudi Arabia
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Parmeggiani F, Weise NJ, Ahmed ST, Turner NJ. Synthetic and Therapeutic Applications of Ammonia-lyases and Aminomutases. Chem Rev 2017; 118:73-118. [DOI: 10.1021/acs.chemrev.6b00824] [Citation(s) in RCA: 105] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Fabio Parmeggiani
- School of Chemistry, Manchester
Institute of Biotechnology, University of Manchester, 131 Princess
Street, M1 7DN, Manchester, United Kingdom
| | - Nicholas J. Weise
- School of Chemistry, Manchester
Institute of Biotechnology, University of Manchester, 131 Princess
Street, M1 7DN, Manchester, United Kingdom
| | - Syed T. Ahmed
- School of Chemistry, Manchester
Institute of Biotechnology, University of Manchester, 131 Princess
Street, M1 7DN, Manchester, United Kingdom
| | - Nicholas J. Turner
- School of Chemistry, Manchester
Institute of Biotechnology, University of Manchester, 131 Princess
Street, M1 7DN, Manchester, United Kingdom
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Kasaei A, Mobini-Dehkordi M, Mahjoubi F, Saffar B. Isolation of Taxol-Producing Endophytic Fungi from Iranian Yew Through Novel Molecular Approach and Their Effects on Human Breast Cancer Cell Line. Curr Microbiol 2017; 74:702-709. [DOI: 10.1007/s00284-017-1231-0] [Citation(s) in RCA: 34] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2016] [Accepted: 03/14/2017] [Indexed: 11/27/2022]
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Vasundhara M, Kumar A, Reddy MS. Molecular Approaches to Screen Bioactive Compounds from Endophytic Fungi. Front Microbiol 2016; 7:1774. [PMID: 27895623 PMCID: PMC5108243 DOI: 10.3389/fmicb.2016.01774] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2016] [Accepted: 10/21/2016] [Indexed: 02/05/2023] Open
Abstract
Endophytic fungi are capable of producing plant associated metabolites and their analogs with therapeutic value. In order to identify the potential endophytic isolates producing bioactive compounds, one need to screen all isolated endophytes, which may run into hundreds. Isolation of endophytic fungi is relatively a simple process; but screening of the isolated fungi for required metabolite production is a cumbersome process. Endophytic fungi producing plant associated metabolites may contain genes involved in the entire biosynthetic pathway(s). Therefore, ascertaining the presence of key enzymes of a particular biosynthetic pathway could serve as a molecular marker for screening of these endophytes to produce that metabolite. In absence of entire biosynthetic pathways in endophytic fungi, plant genes associated with that metabolic pathway could serve as markers. This review focuses on the impact of molecular approaches to screen the endophytic fungi for the production of bioactive compounds. An attempt has been made on screening of anticancer compounds like taxol (paclitaxel), podophyllotoxin, and camptothecin using molecular markers. The advantages of molecular approaches over conventional methods to screen endophytic fungi and also identification of endophytic fungi are discussed.
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