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For: Burroughs AM, Allen KN, Dunaway-Mariano D, Aravind L. Evolutionary genomics of the HAD superfamily: understanding the structural adaptations and catalytic diversity in a superfamily of phosphoesterases and allied enzymes. J Mol Biol 2006;361:1003-34. [PMID: 16889794 DOI: 10.1016/j.jmb.2006.06.049] [Citation(s) in RCA: 321] [Impact Index Per Article: 17.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2005] [Revised: 06/16/2006] [Accepted: 06/20/2006] [Indexed: 11/21/2022]
Number Cited by Other Article(s)
1
Chen Y, Liu Z, Han D, Yang Q, Li C, Shi X, Zhang M, Yang C, Qiu L, Jia H, Wang S, Lu W, Ma Q, Yan L. Cold tolerance SNPs and candidate gene mining in the soybean germination stage based on genome-wide association analysis. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2024;137:178. [PMID: 38976061 DOI: 10.1007/s00122-024-04685-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Accepted: 06/25/2024] [Indexed: 07/09/2024]
2
Liu S, Xu Z, Essemine J, Liu Y, Liu C, Zhang F, Iqbal Z, Qu M. GWAS unravels acid phosphatase ACP2 as a photosynthesis regulator under phosphate starvation conditions through modulating serine metabolism in rice. PLANT COMMUNICATIONS 2024;5:100885. [PMID: 38504521 DOI: 10.1016/j.xplc.2024.100885] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Revised: 11/09/2023] [Accepted: 03/18/2024] [Indexed: 03/21/2024]
3
Scharf A, La-Rostami F, Illarionov BA, Nemes V, Feldmann AM, Höft LS, Lösel H, Bacher A, Fischer M. Systematic Analysis of the Effect of Genomic Knock-Out of Non-Essential Promiscuous HAD-Like Phosphatases YcsE, YitU and YwtE on Flavin and Adenylate Content in Bacillus Subtilis. Chembiochem 2024;25:e202400165. [PMID: 38616163 DOI: 10.1002/cbic.202400165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2024] [Revised: 04/05/2024] [Accepted: 04/09/2024] [Indexed: 04/16/2024]
4
Brenner M, Zink C, Witzinger L, Keller A, Hadamek K, Bothe S, Neuenschwander M, Villmann C, von Kries JP, Schindelin H, Jeanclos E, Gohla A. 7,8-Dihydroxyflavone is a direct inhibitor of human and murine pyridoxal phosphatase. eLife 2024;13:RP93094. [PMID: 38856179 PMCID: PMC11164532 DOI: 10.7554/elife.93094] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/11/2024]  Open
5
Stockbridge RB, Wackett LP. The link between ancient microbial fluoride resistance mechanisms and bioengineering organofluorine degradation or synthesis. Nat Commun 2024;15:4593. [PMID: 38816380 PMCID: PMC11139923 DOI: 10.1038/s41467-024-49018-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2024] [Accepted: 05/20/2024] [Indexed: 06/01/2024]  Open
6
Kozome D, Sljoka A, Laurino P. Remote loop evolution reveals a complex biological function for chitinase enzymes beyond the active site. Nat Commun 2024;15:3227. [PMID: 38622119 PMCID: PMC11018821 DOI: 10.1038/s41467-024-47588-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Accepted: 04/08/2024] [Indexed: 04/17/2024]  Open
7
Singh L, Karthikeyan S, Thakur KG. Biochemical and structural characterization reveals Rv3400 codes for β-phosphoglucomutase in Mycobacterium tuberculosis. Protein Sci 2024;33:e4943. [PMID: 38501428 PMCID: PMC10949319 DOI: 10.1002/pro.4943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Revised: 01/22/2024] [Accepted: 02/11/2024] [Indexed: 03/20/2024]
8
Kaur H, Rode S, Kp S, Mahto JK, Alam MS, Gupta DN, Kar B, Singla J, Kumar P, Sharma AK. Characterization of haloacid dehalogenase superfamily acid phosphatase from Staphylococcus lugdunensis. Arch Biochem Biophys 2024;753:109888. [PMID: 38232797 DOI: 10.1016/j.abb.2024.109888] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2023] [Revised: 01/08/2024] [Accepted: 01/09/2024] [Indexed: 01/19/2024]
9
Zeinert R, Zhou F, Franco P, Zöller J, Lessen HJ, Aravind L, Langer JD, Sodt AJ, Storz G, Matthies D. Magnesium Transporter MgtA revealed as a Dimeric P-type ATPase. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.02.28.582502. [PMID: 38464158 PMCID: PMC10925321 DOI: 10.1101/2024.02.28.582502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/12/2024]
10
Kinateder T, Mayer C, Nazet J, Sterner R. Improving enzyme functional annotation by integrating in vitro and in silico approaches: The example of histidinol phosphate phosphatases. Protein Sci 2024;33:e4899. [PMID: 38284491 PMCID: PMC10804674 DOI: 10.1002/pro.4899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2023] [Revised: 12/13/2023] [Accepted: 01/01/2024] [Indexed: 01/30/2024]
11
Xing H, Cai P, Liu D, Han M, Liu J, Le Y, Zhang D, Hu QN. High-throughput prediction of enzyme promiscuity based on substrate-product pairs. Brief Bioinform 2024;25:bbae089. [PMID: 38487850 PMCID: PMC10940840 DOI: 10.1093/bib/bbae089] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2023] [Revised: 01/20/2024] [Accepted: 02/03/2024] [Indexed: 03/18/2024]  Open
12
Fiamenghi MB, Prodonoff JS, Borelli G, Carazzolle MF, Pereira GAG, José J. Comparative genomics reveals probable adaptations for xylose use in Thermoanaerobacterium saccharolyticum. Extremophiles 2024;28:9. [PMID: 38190047 DOI: 10.1007/s00792-023-01327-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Accepted: 11/28/2023] [Indexed: 01/09/2024]
13
Duminil P, Oury C, Hodges M, Glab N. Determination of Phosphoglycolate Phosphatase Activity via a Coupled Reaction Using Recombinant Glycolate Oxidase. Methods Mol Biol 2024;2792:29-39. [PMID: 38861076 DOI: 10.1007/978-1-0716-3802-6_3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2024]
14
Mauve C, Oury C, Glab N, Hodges M. Measuring Phosphoglycolate Phosphatase Activity Using NMR Detection of Glycolate. Methods Mol Biol 2024;2792:19-27. [PMID: 38861075 DOI: 10.1007/978-1-0716-3802-6_2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/12/2024]
15
Wang Z, Zhang Y, Aweya JJ, Lin Z, Yao D, Zheng Z. The histidine phosphatase LHPP of Penaeus vannamei is involved in shrimp hemocytes apoptosis. FISH AND SHELLFISH IMMUNOLOGY REPORTS 2023;5:100109. [PMID: 37448875 PMCID: PMC10336261 DOI: 10.1016/j.fsirep.2023.100109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2022] [Revised: 06/11/2023] [Accepted: 06/26/2023] [Indexed: 07/15/2023]  Open
16
Nicastro GG, Burroughs AM, Iyer L, Aravind L. Functionally comparable but evolutionarily distinct nucleotide-targeting effectors help identify conserved paradigms across diverse immune systems. Nucleic Acids Res 2023;51:11479-11503. [PMID: 37889040 PMCID: PMC10681802 DOI: 10.1093/nar/gkad879] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Revised: 09/21/2023] [Accepted: 09/28/2023] [Indexed: 10/28/2023]  Open
17
Hernández-Cid A, Lozano-Aponte J, Scior T. Molecular Dynamics and Docking Simulations of Homologous RsmE Methyltransferases Hints at a General Mechanism for Substrate Release upon Uridine Methylation on 16S rRNA. Int J Mol Sci 2023;24:16722. [PMID: 38069045 PMCID: PMC10706118 DOI: 10.3390/ijms242316722] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2023] [Revised: 11/12/2023] [Accepted: 11/14/2023] [Indexed: 12/18/2023]  Open
18
Jia X, Gao Y, Huang Y, Sun L, Li S, Li H, Zhang X, Li Y, He J, Wu W, Venkannagari H, Yang K, Baker ML, Zhang Q. Architecture of the baculovirus nucleocapsid revealed by cryo-EM. Nat Commun 2023;14:7481. [PMID: 37980340 PMCID: PMC10657434 DOI: 10.1038/s41467-023-43284-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2023] [Accepted: 11/03/2023] [Indexed: 11/20/2023]  Open
19
Chen TH, Lin HC. Terpene Synthases in the Biosynthesis of Drimane-Type Sesquiterpenes across Diverse Organisms. Chembiochem 2023;24:e202300518. [PMID: 37605310 DOI: 10.1002/cbic.202300518] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Revised: 08/19/2023] [Accepted: 08/21/2023] [Indexed: 08/23/2023]
20
Kerbler SML, Armijos-Jaramillo V, Lunn JE, Vicente R. The trehalose 6-phosphate phosphatase family in plants. PHYSIOLOGIA PLANTARUM 2023;175:e14096. [PMID: 38148193 DOI: 10.1111/ppl.14096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 10/15/2023] [Accepted: 11/12/2023] [Indexed: 12/28/2023]
21
Pathira Kankanamge LS, Ruffner LA, Touch MM, Pina M, Beuning PJ, Ondrechen MJ. Functional annotation of haloacid dehalogenase superfamily structural genomics proteins. Biochem J 2023;480:1553-1569. [PMID: 37747786 DOI: 10.1042/bcj20230057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2023] [Revised: 09/20/2023] [Accepted: 09/25/2023] [Indexed: 09/26/2023]
22
Leader DP, Milner-White EJ. The conserved crown bridge loop at the catalytic centre of enzymes of the haloacid dehalogenase superfamily. Curr Res Struct Biol 2023;6:100105. [PMID: 37786806 PMCID: PMC10541634 DOI: 10.1016/j.crstbi.2023.100105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Revised: 08/31/2023] [Accepted: 09/10/2023] [Indexed: 10/04/2023]  Open
23
Shiver AL, Sun J, Culver R, Violette A, Wynter C, Nieckarz M, Mattiello SP, Sekhon PK, Friess L, Carlson HK, Wong D, Higginbottom S, Weglarz M, Wang W, Knapp BD, Guiberson E, Sanchez J, Huang PH, Garcia PA, Buie CR, Good B, DeFelice B, Cava F, Scaria J, Sonnenburg J, Sinderen DV, Deutschbauer AM, Huang KC. A mutant fitness compendium in Bifidobacteria reveals molecular determinants of colonization and host-microbe interactions. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.08.29.555234. [PMID: 37693407 PMCID: PMC10491234 DOI: 10.1101/2023.08.29.555234] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/12/2023]
24
Zan X, Zhou Z, Wan J, Chen H, Zhu J, Xu H, Zhang J, Li X, Gao X, Chen R, Huang Z, Xu Z, Li L. Overexpression of OsHAD3, a Member of HAD Superfamily, Decreases Drought Tolerance of Rice. RICE (NEW YORK, N.Y.) 2023;16:31. [PMID: 37468664 DOI: 10.1186/s12284-023-00647-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Accepted: 07/07/2023] [Indexed: 07/21/2023]
25
Cifuente JO, Schulze J, Bethe A, Di Domenico V, Litschko C, Budde I, Eidenberger L, Thiesler H, Ramón Roth I, Berger M, Claus H, D'Angelo C, Marina A, Gerardy-Schahn R, Schubert M, Guerin ME, Fiebig T. A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule. Nat Chem Biol 2023;19:865-877. [PMID: 37277468 PMCID: PMC10299916 DOI: 10.1038/s41589-023-01324-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2022] [Accepted: 03/31/2023] [Indexed: 06/07/2023]
26
Shin J, Rychel K, Palsson BO. Systems biology of competency in Vibrio natriegens is revealed by applying novel data analytics to the transcriptome. Cell Rep 2023;42:112619. [PMID: 37285268 DOI: 10.1016/j.celrep.2023.112619] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2022] [Revised: 04/27/2023] [Accepted: 05/22/2023] [Indexed: 06/09/2023]  Open
27
Leister D, Sharma A, Kerber N, Nägele T, Reiter B, Pasch V, Beeh S, Jahns P, Barbato R, Pribil M, Rühle T. An ancient metabolite damage-repair system sustains photosynthesis in plants. Nat Commun 2023;14:3023. [PMID: 37230969 DOI: 10.1038/s41467-023-38804-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Accepted: 05/12/2023] [Indexed: 05/27/2023]  Open
28
Guo Y, Zhu Z, Lv J, Li Y, Chen J, Cheng X, Li N, Liu J. Irreversible biosynthesis of D-allulose from D-glucose in Escherichia coli through fine-tuning of carbon flux and cofactor regeneration engineering. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023. [PMID: 37050847 DOI: 10.1002/jsfa.12623] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Revised: 04/07/2023] [Accepted: 04/13/2023] [Indexed: 06/19/2023]
29
Castro JC, Castro CG, Cobos M. Genetic and biochemical strategies for regulation of L-ascorbic acid biosynthesis in plants through the L-galactose pathway. FRONTIERS IN PLANT SCIENCE 2023;14:1099829. [PMID: 37021310 PMCID: PMC10069634 DOI: 10.3389/fpls.2023.1099829] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 02/27/2023] [Indexed: 06/19/2023]
30
Burroughs A, Aravind L. New biochemistry in the Rhodanese-phosphatase superfamily: emerging roles in diverse metabolic processes, nucleic acid modifications, and biological conflicts. NAR Genom Bioinform 2023;5:lqad029. [PMID: 36968430 PMCID: PMC10034599 DOI: 10.1093/nargab/lqad029] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2022] [Revised: 02/10/2023] [Accepted: 03/09/2023] [Indexed: 03/25/2023]  Open
31
Johansson M, Steffen A, Lewinski M, Kobi N, Staiger D. HDF1, a novel flowering time regulator identified in a mutant suppressing sensitivity to red light reduced 1 early flowering. Sci Rep 2023;13:1404. [PMID: 36697433 PMCID: PMC9876914 DOI: 10.1038/s41598-023-28049-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Accepted: 01/11/2023] [Indexed: 01/26/2023]  Open
32
Liu C, Wang Z, Chen Y, Yan Y, Li L, Wang YJ, Bai L, Li S, Zhang Y, Wang X, Huang SX, Xiang W. Guvermectin Biosynthesis Revealing the Key Role of a Phosphoribohydrolase and Structural Insight into the Active Glutamate of a Noncanonical Adenine Phosphoribosyltransferase. ACS Chem Biol 2023;18:102-111. [PMID: 36623177 DOI: 10.1021/acschembio.2c00739] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
33
Miton CM, Tokuriki N. Insertions and Deletions (Indels): A Missing Piece of the Protein Engineering Jigsaw. Biochemistry 2023;62:148-157. [PMID: 35830609 DOI: 10.1021/acs.biochem.2c00188] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/08/2023]
34
Qin Y, Li Q, Fan L, Ning X, Wei X, You C. Biomanufacturing by In Vitro Biotransformation (ivBT) Using Purified Cascade Multi-enzymes. ADVANCES IN BIOCHEMICAL ENGINEERING/BIOTECHNOLOGY 2023;186:1-27. [PMID: 37455283 DOI: 10.1007/10_2023_231] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 07/18/2023]
35
Bauwe H. Photorespiration - Rubisco's repair crew. JOURNAL OF PLANT PHYSIOLOGY 2023;280:153899. [PMID: 36566670 DOI: 10.1016/j.jplph.2022.153899] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2022] [Revised: 12/11/2022] [Accepted: 12/11/2022] [Indexed: 06/17/2023]
36
Kinateder T, Drexler L, Straub K, Merkl R, Sterner R. Experimental and computational analysis of the ancestry of an evolutionary young enzyme from histidine biosynthesis. Protein Sci 2023;32:e4536. [PMID: 36502290 PMCID: PMC9798254 DOI: 10.1002/pro.4536] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Revised: 12/01/2022] [Accepted: 12/03/2022] [Indexed: 12/14/2022]
37
Grigorian E, Roret T, Czjzek M, Leblanc C, Delage L. X-ray structure and mechanism of ZgHAD, a l-2-haloacid dehalogenase from the marine Flavobacterium Zobellia galactanivorans. Protein Sci 2023;32:e4540. [PMID: 36502283 PMCID: PMC9794022 DOI: 10.1002/pro.4540] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2022] [Revised: 11/24/2022] [Accepted: 12/06/2022] [Indexed: 12/14/2022]
38
Ahmad S, Zhang J, Wang H, Zhu H, Dong Q, Zong S, Wang T, Chen Y, Ge L. The Phosphoserine Phosphatase Alters the Free Amino Acid Compositions and Fecundity in Cyrtorhinus lividipennis Reuter. Int J Mol Sci 2022;23:ijms232315283. [PMID: 36499611 PMCID: PMC9740327 DOI: 10.3390/ijms232315283] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2022] [Revised: 11/30/2022] [Accepted: 12/02/2022] [Indexed: 12/12/2022]  Open
39
Wang J, Fan H, Li Y, Zhang TF, Liu YH. Trehalose-6-phosphate phosphatases are involved in trehalose synthesis and metamorphosis in Bactrocera minax. INSECT SCIENCE 2022;29:1643-1658. [PMID: 35075784 DOI: 10.1111/1744-7917.13010] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Revised: 12/24/2021] [Accepted: 01/17/2022] [Indexed: 06/14/2023]
40
Glycolytic flux control by drugging phosphoglycolate phosphatase. Nat Commun 2022;13:6845. [PMID: 36369173 PMCID: PMC9652372 DOI: 10.1038/s41467-022-34228-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 10/14/2022] [Indexed: 11/13/2022]  Open
41
Riegert AS, Narindoshvili T, Platzer NE, Raushel FM. Functional Characterization of a HAD Phosphatase Involved in Capsular Polysaccharide Biosynthesis in Campylobacter jejuni. Biochemistry 2022;61:2431-2440. [PMID: 36214481 PMCID: PMC9633586 DOI: 10.1021/acs.biochem.2c00484] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
42
Apprehending the NAD+–ADPr-Dependent Systems in the Virus World. Viruses 2022;14:v14091977. [PMID: 36146784 PMCID: PMC9503650 DOI: 10.3390/v14091977] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Revised: 09/01/2022] [Accepted: 09/05/2022] [Indexed: 11/19/2022]  Open
43
Hsieh WY, Wang HM, Chung YH, Lee KT, Liao HS, Hsieh MH. THIAMIN REQUIRING2 is involved in thiamin diphosphate biosynthesis and homeostasis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2022;111:1383-1396. [PMID: 35791282 DOI: 10.1111/tpj.15895] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Revised: 06/28/2022] [Accepted: 07/01/2022] [Indexed: 06/15/2023]
44
Noor E, Flamholz AI, Jayaraman V, Ross BL, Cohen Y, Patrick WM, Gruic‐Sovulj I, Tawfik DS. Uniform binding and negative catalysis at the origin of enzymes. Protein Sci 2022;31:e4381. [PMID: 35900021 PMCID: PMC9281367 DOI: 10.1002/pro.4381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2022] [Revised: 06/06/2022] [Accepted: 06/15/2022] [Indexed: 11/06/2022]
45
Liu Y, Wu Y, Jiang M. The emerging roles of PHOSPHO1 and its regulated phospholipid homeostasis in metabolic disorders. Front Physiol 2022;13:935195. [PMID: 35957983 PMCID: PMC9360546 DOI: 10.3389/fphys.2022.935195] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2022] [Accepted: 07/07/2022] [Indexed: 11/25/2022]  Open
46
Tian C, Yang J, Liu C, Chen P, Zhang T, Men Y, Ma H, Sun Y, Ma Y. Engineering substrate specificity of HAD phosphatases and multienzyme systems development for the thermodynamic-driven manufacturing sugars. Nat Commun 2022;13:3582. [PMID: 35739124 PMCID: PMC9226320 DOI: 10.1038/s41467-022-31371-8] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 06/15/2022] [Indexed: 11/09/2022]  Open
47
Merski M, Macedo-Ribeiro S, Wieczorek RM, Górna MW. The Repeating, Modular Architecture of the HtrA Proteases. Biomolecules 2022;12:biom12060793. [PMID: 35740918 PMCID: PMC9221053 DOI: 10.3390/biom12060793] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2022] [Revised: 06/02/2022] [Accepted: 06/04/2022] [Indexed: 02/04/2023]  Open
48
Vo NNQ, Nomura Y, Kinugasa K, Takagi H, Takahashi S. Identification and Characterization of Bifunctional Drimenol Synthases of Marine Bacterial Origin. ACS Chem Biol 2022;17:1226-1238. [PMID: 35446557 PMCID: PMC9128629 DOI: 10.1021/acschembio.2c00163] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
49
Altensell J, Wartenberg R, Haferkamp I, Hassler S, Scherer V, Steensma P, Fitzpatrick TB, Sharma A, Sandoval-Ibañez O, Pribil M, Lehmann M, Leister D, Kleine T, Neuhaus HE. Loss of a pyridoxal-phosphate phosphatase rescues Arabidopsis lacking an endoplasmic reticulum ATP carrier. PLANT PHYSIOLOGY 2022;189:49-65. [PMID: 35139220 PMCID: PMC9070803 DOI: 10.1093/plphys/kiac048] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Accepted: 01/12/2022] [Indexed: 05/31/2023]
50
Rao KH, Roy K, Ghosh S. Srg1, a putative protein phosphatase from the HAD-family, is involved in stress adaptation in Candida albicans. Biochim Biophys Acta Gen Subj 2022;1866:130164. [PMID: 35523365 DOI: 10.1016/j.bbagen.2022.130164] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2021] [Revised: 04/23/2022] [Accepted: 04/28/2022] [Indexed: 10/18/2022]
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