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For: Forster JL, Harkin VB, Graham DA, McCullough SJ. The effect of sample type, temperature and RNAlater on the stability of avian influenza virus RNA. J Virol Methods 2008;149:190-4. [PMID: 18294703 DOI: 10.1016/j.jviromet.2007.12.020] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2007] [Revised: 11/16/2007] [Accepted: 12/20/2007] [Indexed: 12/09/2022]
Number Cited by Other Article(s)
1
Butel-Simoes G, Steinig E, Savic I, Zhanduisenov M, Papadakis G, Tran T, Moselen J, Caly L, Williamson DA, Lim CK. Optimising nucleic acid recovery from rapid antigen tests for whole genome sequencing of respiratory viruses. J Clin Virol 2024;174:105714. [PMID: 39038394 DOI: 10.1016/j.jcv.2024.105714] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2024] [Revised: 07/09/2024] [Accepted: 07/11/2024] [Indexed: 07/24/2024]
2
Munguía-Ramírez B, Giménez-Lirola L, Zimmerman J. Assessment of Strategies for Preserving Swine Viral RNA Targets in Diagnostic Specimens. Microorganisms 2024;12:410. [PMID: 38399814 PMCID: PMC10892022 DOI: 10.3390/microorganisms12020410] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2024] [Revised: 02/13/2024] [Accepted: 02/15/2024] [Indexed: 02/25/2024]  Open
3
Vereecke N, Woźniak A, Pauwels M, Coppens S, Nauwynck H, Cybulski P, Theuns S, Stadejek T. Successful Whole Genome Nanopore Sequencing of Swine Influenza A Virus (swIAV) Directly from Oral Fluids Collected in Polish Pig Herds. Viruses 2023;15:435. [PMID: 36851649 PMCID: PMC9962634 DOI: 10.3390/v15020435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 01/20/2023] [Accepted: 01/31/2023] [Indexed: 02/09/2023]  Open
4
Pepin KM, Hopken MW, Shriner SA, Spackman E, Abdo Z, Parrish C, Riley S, Lloyd-Smith JO, Piaggio AJ. Improving risk assessment of the emergence of novel influenza A viruses by incorporating environmental surveillance. Philos Trans R Soc Lond B Biol Sci 2019;374:20180346. [PMID: 31401963 PMCID: PMC6711309 DOI: 10.1098/rstb.2018.0346] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
5
Smith O, Dunshea G, Sinding MHS, Fedorov S, Germonpre M, Bocherens H, Gilbert MTP. Ancient RNA from Late Pleistocene permafrost and historical canids shows tissue-specific transcriptome survival. PLoS Biol 2019;17:e3000166. [PMID: 31361744 PMCID: PMC6667121 DOI: 10.1371/journal.pbio.3000166] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Accepted: 06/25/2019] [Indexed: 01/31/2023]  Open
6
Evaluation of two workflows for whole genome sequencing-based typing of influenza A viruses. J Virol Methods 2019;266:30-33. [PMID: 30677464 DOI: 10.1016/j.jviromet.2019.01.009] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2018] [Revised: 01/04/2019] [Accepted: 01/17/2019] [Indexed: 12/20/2022]
7
Bergner LM, Orton RJ, da Silva Filipe A, Shaw AE, Becker DJ, Tello C, Biek R, Streicker DG. Using noninvasive metagenomics to characterize viral communities from wildlife. Mol Ecol Resour 2018;19:128-143. [PMID: 30240114 PMCID: PMC6378809 DOI: 10.1111/1755-0998.12946] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2018] [Revised: 08/22/2018] [Accepted: 09/07/2018] [Indexed: 12/31/2022]
8
Wille M, Yin H, Lundkvist Å, Xu J, Muradrasoli S, Järhult JD. RNAlater® is a viable storage option for avian influenza sampling in logistically challenging conditions. J Virol Methods 2017;252:32-36. [PMID: 29129490 DOI: 10.1016/j.jviromet.2017.11.004] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2017] [Revised: 11/08/2017] [Accepted: 11/08/2017] [Indexed: 11/28/2022]
9
Viruses in the Oceanic Basement. mBio 2017;8:mBio.02129-16. [PMID: 28270584 PMCID: PMC5340873 DOI: 10.1128/mbio.02129-16] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
10
Caron A, Cappelle J, Gaidet N. Challenging the conceptual framework of maintenance hosts for influenza A viruses in wild birds. J Appl Ecol 2016. [DOI: 10.1111/1365-2664.12839] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
11
Liu H, Gan Y, Wu Y, Weng H, Lei P, Shen G. Effects of different lysis buffers of nucleic acid purification kit on the stability of influenza virus RNA. Future Virol 2014. [DOI: 10.2217/fvl.14.39] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
12
Barr KL, Messenger AM, Anderson BD, Friary JA, Heil GL, Reece K, Gray GC. Recovery of live virus after storage at ambient temperature using ViveST™. J Clin Virol 2012;56:57-61. [PMID: 23046621 DOI: 10.1016/j.jcv.2012.09.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2012] [Revised: 09/11/2012] [Accepted: 09/13/2012] [Indexed: 11/29/2022]
13
Wang X, Zoueva O, Zhao J, Ye Z, Hewlett I. Stability and infectivity of novel pandemic influenza A (H1N1) virus in blood-derived matrices under different storage conditions. BMC Infect Dis 2011;11:354. [PMID: 22192363 PMCID: PMC3260324 DOI: 10.1186/1471-2334-11-354] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2011] [Accepted: 12/22/2011] [Indexed: 11/15/2022]  Open
14
Xia JF, Yan XF, Yu H, Qu D, Long JE. Simple and rapid detection of human enterovirus 71 by reverse-transcription and loop-mediated isothermal amplification: cryopreservation affected the detection ability. Diagn Microbiol Infect Dis 2011;71:244-51. [PMID: 21899976 PMCID: PMC7127202 DOI: 10.1016/j.diagmicrobio.2011.07.014] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2011] [Revised: 07/16/2011] [Accepted: 07/26/2011] [Indexed: 11/25/2022]
15
Rapid detection of avian influenza virus in chicken fecal samples by immunomagnetic capture reverse transcriptase-polymerase chain reaction assay. Diagn Microbiol Infect Dis 2011;69:258-65. [PMID: 21353948 DOI: 10.1016/j.diagmicrobio.2010.09.022] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2010] [Revised: 09/09/2010] [Accepted: 09/29/2010] [Indexed: 11/22/2022]
16
Kraus RHS, van Hooft P, Waldenström J, Latorre-Margalef N, Ydenberg RC, Prins HHT. Avian influenza surveillance with FTA cards: field methods, biosafety, and transportation issues solved. J Vis Exp 2011:2832. [PMID: 21847074 PMCID: PMC3211123 DOI: 10.3791/2832] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]  Open
17
Direct detection of highly pathogenic avian influenza A/H5N1 virus from mud specimens. J Virol Methods 2011;176:69-73. [PMID: 21683738 DOI: 10.1016/j.jviromet.2011.06.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2011] [Revised: 05/21/2011] [Accepted: 06/01/2011] [Indexed: 10/18/2022]
18
Conlan JV, Jarman RG, Vongxay K, Chinnawirotpisan P, Melendrez MC, Fenwick S, Thompson RCA, Blacksell SD. Hepatitis E virus is prevalent in the pig population of Lao People's Democratic Republic and evidence exists for homogeneity with Chinese Genotype 4 human isolates. INFECTION GENETICS AND EVOLUTION 2011;11:1306-11. [PMID: 21550423 DOI: 10.1016/j.meegid.2011.04.022] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2011] [Revised: 04/06/2011] [Accepted: 04/19/2011] [Indexed: 11/25/2022]
19
Evaluation and clinical validation of an alcohol-based transport medium for preservation and inactivation of respiratory viruses. J Clin Microbiol 2011;49:2138-42. [PMID: 21508158 DOI: 10.1128/jcm.00327-11] [Citation(s) in RCA: 24] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
20
Cumming GS, Caron A, Abolnik C, Cattoli G, Bruinzeel LW, Burger CE, Cecchettin K, Chiweshe N, Mochotlhoane B, Mutumi GL, Ndlovu M. The ecology of influenza A viruses in wild birds in southern Africa. ECOHEALTH 2011;8:4-13. [PMID: 21516374 DOI: 10.1007/s10393-011-0684-z] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2010] [Revised: 03/03/2011] [Accepted: 04/04/2011] [Indexed: 05/30/2023]
21
Genomic characterization of severe acute respiratory syndrome-related coronavirus in European bats and classification of coronaviruses based on partial RNA-dependent RNA polymerase gene sequences. J Virol 2010;84:11336-49. [PMID: 20686038 DOI: 10.1128/jvi.00650-10] [Citation(s) in RCA: 262] [Impact Index Per Article: 18.7] [Reference Citation Analysis] [Abstract] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]  Open
22
Pfefferle S, Oppong S, Drexler JF, Gloza-Rausch F, Ipsen A, Seebens A, Müller MA, Annan A, Vallo P, Adu-Sarkodie Y, Kruppa TF, Drosten C. Distant relatives of severe acute respiratory syndrome coronavirus and close relatives of human coronavirus 229E in bats, Ghana. Emerg Infect Dis 2010;15:1377-84. [PMID: 19788804 PMCID: PMC2819850 DOI: 10.3201/eid1509.090224] [Citation(s) in RCA: 191] [Impact Index Per Article: 13.6] [Reference Citation Analysis] [Abstract] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]  Open
23
Drexler JF, Corman VM, Gloza-Rausch F, Seebens A, Annan A, Ipsen A, Kruppa T, Müller MA, Kalko EKV, Adu-Sarkodie Y, Oppong S, Drosten C. Henipavirus RNA in African bats. PLoS One 2009;4:e6367. [PMID: 19636378 PMCID: PMC2712088 DOI: 10.1371/journal.pone.0006367] [Citation(s) in RCA: 151] [Impact Index Per Article: 10.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2009] [Accepted: 06/25/2009] [Indexed: 11/18/2022]  Open
24
Cliver DO. Control of Viral Contamination of Food and Environment. FOOD AND ENVIRONMENTAL VIROLOGY 2009;1. [PMCID: PMC7090503 DOI: 10.1007/s12560-008-9005-2] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
25
Animal health and welfare aspects of avian influenza and the risk of its introduction into the EU poultry holdings - Scientific opinion of the Panel on Animal Health and Welfare. EFSA J 2008. [DOI: 10.2903/j.efsa.2008.715] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]  Open
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