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Vinck M, Uran C, Dowdall JR, Rummell B, Canales-Johnson A. Large-scale interactions in predictive processing: oscillatory versus transient dynamics. Trends Cogn Sci 2024:S1364-6613(24)00256-0. [PMID: 39424521 DOI: 10.1016/j.tics.2024.09.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 09/17/2024] [Accepted: 09/26/2024] [Indexed: 10/21/2024]
Abstract
How do the two main types of neural dynamics, aperiodic transients and oscillations, contribute to the interactions between feedforward (FF) and feedback (FB) pathways in sensory inference and predictive processing? We discuss three theoretical perspectives. First, we critically evaluate the theory that gamma and alpha/beta rhythms play a role in classic hierarchical predictive coding (HPC) by mediating FF and FB communication, respectively. Second, we outline an alternative functional model in which rapid sensory inference is mediated by aperiodic transients, whereas oscillations contribute to the stabilization of neural representations over time and plasticity processes. Third, we propose that the strong dependence of oscillations on predictability can be explained based on a biologically plausible alternative to classic HPC, namely dendritic HPC.
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Affiliation(s)
- Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience, in Cooperation with the Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neurophysics, Radboud University, 6525 Nijmegen, The Netherlands.
| | - Cem Uran
- Ernst Strüngmann Institute (ESI) for Neuroscience, in Cooperation with the Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neurophysics, Radboud University, 6525 Nijmegen, The Netherlands.
| | - Jarrod R Dowdall
- Robarts Research Institute, Western University, London, ON, Canada
| | - Brian Rummell
- Ernst Strüngmann Institute (ESI) for Neuroscience, in Cooperation with the Max Planck Society, 60528 Frankfurt am Main, Germany
| | - Andres Canales-Johnson
- Facultad de Ciencias de la Salud, Universidad Catolica del Maule, 3480122 Talca, Chile; Department of Psychology, University of Cambridge, Cambridge CB2 3EB, UK.
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2
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Nandi MK, Valla M, di Volo M. Bursting gamma oscillations in neural mass models. Front Comput Neurosci 2024; 18:1422159. [PMID: 39281982 PMCID: PMC11392745 DOI: 10.3389/fncom.2024.1422159] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2024] [Accepted: 08/08/2024] [Indexed: 09/18/2024] Open
Abstract
Gamma oscillations (30-120 Hz) in the brain are not periodic cycles, but they typically appear in short-time windows, often called oscillatory bursts. While the origin of this bursting phenomenon is still unclear, some recent studies hypothesize its origin in the external or endogenous noise of neural networks. We demonstrate that an exact neural mass model of excitatory and inhibitory quadratic-integrate and fire-spiking neurons theoretically predicts the emergence of a different regime of intrinsic bursting gamma (IBG) oscillations without any noise source, a phenomenon due to collective chaos. This regime is indeed observed in the direct simulation of spiking neurons, characterized by highly irregular spiking activity. IBG oscillations are distinguished by higher phase-amplitude coupling to slower theta oscillations concerning noise-induced bursting oscillations, thus indicating an increased capacity for information transfer between brain regions. We demonstrate that this phenomenon is present in both globally coupled and sparse networks of spiking neurons. These results propose a new mechanism for gamma oscillatory activity, suggesting deterministic collective chaos as a good candidate for the origin of gamma bursts.
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Affiliation(s)
- Manoj Kumar Nandi
- Université Claude Bernard Lyon 1, Lyon, Rhône-Alpes, France
- INSERM U1208 Institut Cellule Souche et Cerveau, Bron, France
| | - Michele Valla
- Université Claude Bernard Lyon 1, Lyon, Rhône-Alpes, France
- INSERM U1208 Institut Cellule Souche et Cerveau, Bron, France
| | - Matteo di Volo
- Université Claude Bernard Lyon 1, Lyon, Rhône-Alpes, France
- INSERM U1208 Institut Cellule Souche et Cerveau, Bron, France
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3
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Luo L, Wang X, Lu J, Chen G, Luan G, Li W, Wang Q, Fang F. Local field potentials, spiking activity, and receptive fields in human visual cortex. SCIENCE CHINA. LIFE SCIENCES 2024; 67:543-554. [PMID: 37957484 DOI: 10.1007/s11427-023-2436-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Accepted: 08/21/2023] [Indexed: 11/15/2023]
Abstract
The concept of receptive field (RF) is central to sensory neuroscience. Neuronal RF properties have been substantially studied in animals, while those in humans remain nearly unexplored. Here, we measured neuronal RFs with intracranial local field potentials (LFPs) and spiking activity in human visual cortex (V1/V2/V3). We recorded LFPs via macro-contacts and discovered that RF sizes estimated from low-frequency activity (LFA, 0.5-30 Hz) were larger than those estimated from low-gamma activity (LGA, 30-60 Hz) and high-gamma activity (HGA, 60-150 Hz). We then took a rare opportunity to record LFPs and spiking activity via microwires in V1 simultaneously. We found that RF sizes and temporal profiles measured from LGA and HGA closely matched those from spiking activity. In sum, this study reveals that spiking activity of neurons in human visual cortex could be well approximated by LGA and HGA in RF estimation and temporal profile measurement, implying the pivotal functions of LGA and HGA in early visual information processing.
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Affiliation(s)
- Lu Luo
- School of Psychological and Cognitive Sciences and Beijing Key Laboratory of Behavior and Mental Health, Peking University, Beijing, 100871, China
- School of Psychology, Beijing Sport University, Beijing, 100084, China
| | - Xiongfei Wang
- Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, 100093, China
- Beijing Key Laboratory of Epilepsy, Epilepsy Center, Sanbo Brain Hospital, Capital Medical University, Beijing, 100093, China
| | - Junshi Lu
- School of Psychological and Cognitive Sciences and Beijing Key Laboratory of Behavior and Mental Health, Peking University, Beijing, 100871, China
- IDG/McGovern Institute for Brain Research, Peking University, Beijing, 100871, China
| | - Guanpeng Chen
- School of Psychological and Cognitive Sciences and Beijing Key Laboratory of Behavior and Mental Health, Peking University, Beijing, 100871, China
- IDG/McGovern Institute for Brain Research, Peking University, Beijing, 100871, China
- Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China
| | - Guoming Luan
- Department of Neurosurgery, Sanbo Brain Hospital, Capital Medical University, Beijing, 100093, China
- Beijing Key Laboratory of Epilepsy, Epilepsy Center, Sanbo Brain Hospital, Capital Medical University, Beijing, 100093, China
- Beijing Institute for Brain Disorders, Beijing, 100069, China
| | - Wu Li
- State Key Laboratory of Cognitive Neuroscience and Learning and IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875, China
| | - Qian Wang
- School of Psychological and Cognitive Sciences and Beijing Key Laboratory of Behavior and Mental Health, Peking University, Beijing, 100871, China.
- IDG/McGovern Institute for Brain Research, Peking University, Beijing, 100871, China.
| | - Fang Fang
- School of Psychological and Cognitive Sciences and Beijing Key Laboratory of Behavior and Mental Health, Peking University, Beijing, 100871, China.
- IDG/McGovern Institute for Brain Research, Peking University, Beijing, 100871, China.
- Peking-Tsinghua Center for Life Sciences, Peking University, Beijing, 100871, China.
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4
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Shipp S. Computational components of visual predictive coding circuitry. Front Neural Circuits 2024; 17:1254009. [PMID: 38259953 PMCID: PMC10800426 DOI: 10.3389/fncir.2023.1254009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/06/2023] [Accepted: 12/13/2023] [Indexed: 01/24/2024] Open
Abstract
If a full visual percept can be said to be a 'hypothesis', so too can a neural 'prediction' - although the latter addresses one particular component of image content (such as 3-dimensional organisation, the interplay between lighting and surface colour, the future trajectory of moving objects, and so on). And, because processing is hierarchical, predictions generated at one level are conveyed in a backward direction to a lower level, seeking to predict, in fact, the neural activity at that prior stage of processing, and learning from errors signalled in the opposite direction. This is the essence of 'predictive coding', at once an algorithm for information processing and a theoretical basis for the nature of operations performed by the cerebral cortex. Neural models for the implementation of predictive coding invoke specific functional classes of neuron for generating, transmitting and receiving predictions, and for producing reciprocal error signals. Also a third general class, 'precision' neurons, tasked with regulating the magnitude of error signals contingent upon the confidence placed upon the prediction, i.e., the reliability and behavioural utility of the sensory data that it predicts. So, what is the ultimate source of a 'prediction'? The answer is multifactorial: knowledge of the current environmental context and the immediate past, allied to memory and lifetime experience of the way of the world, doubtless fine-tuned by evolutionary history too. There are, in consequence, numerous potential avenues for experimenters seeking to manipulate subjects' expectation, and examine the neural signals elicited by surprising, and less surprising visual stimuli. This review focuses upon the predictive physiology of mouse and monkey visual cortex, summarising and commenting on evidence to date, and placing it in the context of the broader field. It is concluded that predictive coding has a firm grounding in basic neuroscience and that, unsurprisingly, there remains much to learn.
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Affiliation(s)
- Stewart Shipp
- Institute of Ophthalmology, University College London, London, United Kingdom
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5
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Friedenberger Z, Harkin E, Tóth K, Naud R. Silences, spikes and bursts: Three-part knot of the neural code. J Physiol 2023; 601:5165-5193. [PMID: 37889516 DOI: 10.1113/jp281510] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Accepted: 09/28/2023] [Indexed: 10/28/2023] Open
Abstract
When a neuron breaks silence, it can emit action potentials in a number of patterns. Some responses are so sudden and intense that electrophysiologists felt the need to single them out, labelling action potentials emitted at a particularly high frequency with a metonym - bursts. Is there more to bursts than a figure of speech? After all, sudden bouts of high-frequency firing are expected to occur whenever inputs surge. The burst coding hypothesis advances that the neural code has three syllables: silences, spikes and bursts. We review evidence supporting this ternary code in terms of devoted mechanisms for burst generation, synaptic transmission and synaptic plasticity. We also review the learning and attention theories for which such a triad is beneficial.
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Affiliation(s)
- Zachary Friedenberger
- Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Centre for Neural Dynamics and Artifical Intelligence, Department of Physics, University of Ottawa, Ottawa, Ontario, Ottawa
| | - Emerson Harkin
- Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
| | - Katalin Tóth
- Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
| | - Richard Naud
- Brain and Mind Institute, Department of Cellular and Molecular Medicine, University of Ottawa, Ottawa, Ontario, Canada
- Centre for Neural Dynamics and Artifical Intelligence, Department of Physics, University of Ottawa, Ottawa, Ontario, Ottawa
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6
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Wu EG, Rudzite AM, Bohlen MO, Li PH, Kling A, Cooler S, Rhoades C, Brackbill N, Gogliettino AR, Shah NP, Madugula SS, Sher A, Litke AM, Field GD, Chichilnisky E. Decomposition of retinal ganglion cell electrical images for cell type and functional inference. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.11.06.565889. [PMID: 37986895 PMCID: PMC10659265 DOI: 10.1101/2023.11.06.565889] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2023]
Abstract
Identifying neuronal cell types and their biophysical properties based on their extracellular electrical features is a major challenge for experimental neuroscience and the development of high-resolution brain-machine interfaces. One example is identification of retinal ganglion cell (RGC) types and their visual response properties, which is fundamental for developing future electronic implants that can restore vision. The electrical image (EI) of a RGC, or the mean spatio-temporal voltage footprint of its recorded spikes on a high-density electrode array, contains substantial information about its anatomical, morphological, and functional properties. However, the analysis of these properties is complex because of the high-dimensional nature of the EI. We present a novel optimization-based algorithm to decompose electrical image into a low-dimensional, biophysically-based representation: the temporally-shifted superposition of three learned basis waveforms corresponding to spike waveforms produced in the somatic, dendritic and axonal cellular compartments. Large-scale multi-electrode recordings from the macaque retina were used to test the effectiveness of the decomposition. The decomposition accurately localized the somatic and dendritic compartments of the cell. The imputed dendritic fields of RGCs correctly predicted the location and shape of their visual receptive fields. The inferred waveform amplitudes and shapes accurately identified the four major primate RGC types (ON and OFF midget and parasol cells), a substantial advance. Together, these findings may contribute to more accurate inference of RGC types and their original light responses in the degenerated retina, with possible implications for other electrical imaging applications.
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Affiliation(s)
- Eric G. Wu
- Department of Electrical Engineering, Stanford University
| | | | | | - Peter H. Li
- Department of Neurosurgery, Stanford University
- Department of Ophthalmology, Stanford University
- Hansen Experimental Physics Laboratory, Stanford University
| | - Alexandra Kling
- Department of Neurosurgery, Stanford University
- Department of Ophthalmology, Stanford University
- Hansen Experimental Physics Laboratory, Stanford University
| | - Sam Cooler
- Department of Neurosurgery, Stanford University
| | | | | | | | - Nishal P. Shah
- Department of Electrical Engineering, Stanford University
- Department of Neurosurgery, Stanford University
| | - Sasidhar S. Madugula
- Neurosciences PhD Program, Stanford University
- Stanford School of Medicine, Stanford University
| | - Alexander Sher
- Santa Cruz Institute for Particle Physics, University of California, Santa Cruz
| | - Alan M. Litke
- Santa Cruz Institute for Particle Physics, University of California, Santa Cruz
| | - Greg D. Field
- Department of Neurobiology, Duke University
- Stein Eye Institute, Department of Ophthalmology, University of California, Los Angeles
| | - E.J. Chichilnisky
- Department of Neurosurgery, Stanford University
- Department of Ophthalmology, Stanford University
- Hansen Experimental Physics Laboratory, Stanford University
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7
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Krishnakumaran R, Ray S. Temporal characteristics of gamma rhythm constrain properties of noise in an inhibition-stabilized network model. Cereb Cortex 2023; 33:10108-10121. [PMID: 37492002 PMCID: PMC10502791 DOI: 10.1093/cercor/bhad270] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Revised: 07/07/2023] [Accepted: 07/08/2023] [Indexed: 07/27/2023] Open
Abstract
Gamma rhythm refers to oscillatory neural activity between 30 and 80 Hz, induced in visual cortex by stimuli such as iso-luminant hues or gratings. The power and peak frequency of gamma depend on the properties of the stimulus such as size and contrast. Gamma waveform is typically arch-shaped, with narrow troughs and broad peaks, and can be replicated in a self-oscillating Wilson-Cowan (WC) model operating in an appropriate regime. However, oscillations in this model are infinitely long, unlike physiological gamma that occurs in short bursts. Further, unlike the model, gamma is faster after stimulus onset and slows down over time. Here, we first characterized gamma burst duration in local field potential data recorded from two monkeys as they viewed full screen iso-luminant hues. We then added different types of noise in the inputs to the WC model and tested how that affected duration and temporal dynamics of gamma. While the model failed with the often-used Poisson noise, Ornstein-Uhlenbeck noise applied to both the excitatory and the inhibitory populations replicated the duration and slowing of gamma and replicated the shape and stimulus dependencies. Thus, the temporal dynamics of gamma oscillations put constraints on the type and properties of underlying neural noise.
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Affiliation(s)
- R Krishnakumaran
- IISc Mathematics Initiative, Department of Mathematics, Indian Institute of Science, C V Raman road, Bangalore 560012, Karnataka, India
| | - Supratim Ray
- IISc Mathematics Initiative, Department of Mathematics, Indian Institute of Science, C V Raman road, Bangalore 560012, Karnataka, India
- Centre for Neuroscience, Indian Institute of Science, C V Raman road, Bangalore 560012, Karnataka, India
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8
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Jung YJ, Sun SH, Almasi A, Yunzab M, Meffin H, Ibbotson MR. Characterization of extracellular spike waveforms recorded in wallaby primary visual cortex. Front Neurosci 2023; 17:1244952. [PMID: 37746137 PMCID: PMC10517629 DOI: 10.3389/fnins.2023.1244952] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Accepted: 08/25/2023] [Indexed: 09/26/2023] Open
Abstract
Extracellular recordings were made from 642 units in the primary visual cortex (V1) of a highly visual marsupial, the Tammar wallaby. The receptive field (RF) characteristics of the cells were objectively estimated using the non-linear input model (NIM), and these were correlated with spike shapes. We found that wallaby cortical units had 68% regular spiking (RS), 12% fast spiking (FS), 4% triphasic spiking (TS), 5% compound spiking (CS) and 11% positive spiking (PS). RS waveforms are most often associated with recordings from pyramidal or spiny stellate cell bodies, suggesting that recordings from these cell types dominate in the wallaby cortex. In wallaby, 70-80% of FS and RS cells had orientation selective RFs and had evenly distributed linear and nonlinear RFs. We found that 47% of wallaby PS units were non-orientation selective and they were dominated by linear RFs. Previous studies suggest that the PS units represent recordings from the axon terminals of non-orientation selective cells originating in the lateral geniculate nucleus (LGN). If this is also true in wallaby, as strongly suggested by their low response latencies and bursty spiking properties, the results suggest that significantly more neurons in wallaby LGN are already orientation selective. In wallaby, less than 10% of recorded spikes had triphasic (TS) or sluggish compound spiking (CS) waveforms. These units had a mixture of orientation selective and non-oriented properties, and their cellular origins remain difficult to classify.
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Affiliation(s)
- Young Jun Jung
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC, Australia
- National Vision Research Institute, Australian College of Optometry Carlton, Carlton, VIC, Australia
- Department of Optometry and Vision Sciences, The University of Melbourne, Melbourne, VIC, Australia
| | - Shi H. Sun
- National Vision Research Institute, Australian College of Optometry Carlton, Carlton, VIC, Australia
| | - Ali Almasi
- National Vision Research Institute, Australian College of Optometry Carlton, Carlton, VIC, Australia
| | - Molis Yunzab
- National Vision Research Institute, Australian College of Optometry Carlton, Carlton, VIC, Australia
| | - Hamish Meffin
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC, Australia
| | - Michael R. Ibbotson
- Department of Biomedical Engineering, The University of Melbourne, Melbourne, VIC, Australia
- National Vision Research Institute, Australian College of Optometry Carlton, Carlton, VIC, Australia
- Department of Optometry and Vision Sciences, The University of Melbourne, Melbourne, VIC, Australia
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9
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Schneider M, Tzanou A, Uran C, Vinck M. Cell-type-specific propagation of visual flicker. Cell Rep 2023; 42:112492. [PMID: 37195864 DOI: 10.1016/j.celrep.2023.112492] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2023] [Revised: 03/10/2023] [Accepted: 04/24/2023] [Indexed: 05/19/2023] Open
Abstract
Rhythmic flicker stimulation has gained interest as a treatment for neurodegenerative diseases and as a method for frequency tagging neural activity. Yet, little is known about the way in which flicker-induced synchronization propagates across cortical levels and impacts different cell types. Here, we use Neuropixels to record from the lateral geniculate nucleus (LGN), the primary visual cortex (V1), and CA1 in mice while presenting visual flicker stimuli. LGN neurons show strong phase locking up to 40 Hz, whereas phase locking is substantially weaker in V1 and is absent in CA1. Laminar analyses reveal an attenuation of phase locking at 40 Hz for each processing stage. Gamma-rhythmic flicker predominantly entrains fast-spiking interneurons. Optotagging experiments show that these neurons correspond to either parvalbumin (PV+) or narrow-waveform somatostatin (Sst+) neurons. A computational model can explain the observed differences based on the neurons' capacitative low-pass filtering properties. In summary, the propagation of synchronized activity and its effect on distinct cell types strongly depend on its frequency.
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Affiliation(s)
- Marius Schneider
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands.
| | - Athanasia Tzanou
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany
| | - Cem Uran
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands
| | - Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands.
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10
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Vinck M, Uran C, Spyropoulos G, Onorato I, Broggini AC, Schneider M, Canales-Johnson A. Principles of large-scale neural interactions. Neuron 2023; 111:987-1002. [PMID: 37023720 DOI: 10.1016/j.neuron.2023.03.015] [Citation(s) in RCA: 10] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 02/27/2023] [Accepted: 03/09/2023] [Indexed: 04/08/2023]
Abstract
What mechanisms underlie flexible inter-areal communication in the cortex? We consider four mechanisms for temporal coordination and their contributions to communication: (1) Oscillatory synchronization (communication-through-coherence); (2) communication-through-resonance; (3) non-linear integration; and (4) linear signal transmission (coherence-through-communication). We discuss major challenges for communication-through-coherence based on layer- and cell-type-specific analyses of spike phase-locking, heterogeneity of dynamics across networks and states, and computational models for selective communication. We argue that resonance and non-linear integration are viable alternative mechanisms that facilitate computation and selective communication in recurrent networks. Finally, we consider communication in relation to cortical hierarchy and critically examine the hypothesis that feedforward and feedback communication use fast (gamma) and slow (alpha/beta) frequencies, respectively. Instead, we propose that feedforward propagation of prediction errors relies on the non-linear amplification of aperiodic transients, whereas gamma and beta rhythms represent rhythmic equilibrium states that facilitate sustained and efficient information encoding and amplification of short-range feedback via resonance.
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Affiliation(s)
- Martin Vinck
- Ernst Struengmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neurophysics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands.
| | - Cem Uran
- Ernst Struengmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neurophysics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands
| | - Georgios Spyropoulos
- Ernst Struengmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany
| | - Irene Onorato
- Ernst Struengmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neurophysics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands
| | - Ana Clara Broggini
- Ernst Struengmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany
| | - Marius Schneider
- Ernst Struengmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neurophysics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands
| | - Andres Canales-Johnson
- Department of Psychology, University of Cambridge, CB2 3EB Cambridge, UK; Centro de Investigacion en Neuropsicologia y Neurociencias Cognitivas, Facultad de Ciencias de la Salud, Universidad Catolica del Maule, 3480122 Talca, Chile.
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11
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Tang Y, Zhang X, An L, Yu Z, Liu JK. Diverse role of NMDA receptors for dendritic integration of neural dynamics. PLoS Comput Biol 2023; 19:e1011019. [PMID: 37036844 PMCID: PMC10085026 DOI: 10.1371/journal.pcbi.1011019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Accepted: 03/09/2023] [Indexed: 04/11/2023] Open
Abstract
Neurons, represented as a tree structure of morphology, have various distinguished branches of dendrites. Different types of synaptic receptors distributed over dendrites are responsible for receiving inputs from other neurons. NMDA receptors (NMDARs) are expressed as excitatory units, and play a key physiological role in synaptic function. Although NMDARs are widely expressed in most types of neurons, they play a different role in the cerebellar Purkinje cells (PCs). Utilizing a computational PC model with detailed dendritic morphology, we explored the role of NMDARs at different parts of dendritic branches and regions. We found somatic responses can switch from silent, to simple spikes and complex spikes, depending on specific dendritic branches. Detailed examination of the dendrites regarding their diameters and distance to soma revealed diverse response patterns, yet explain two firing modes, simple and complex spike. Taken together, these results suggest that NMDARs play an important role in controlling excitability sensitivity while taking into account the factor of dendritic properties. Given the complexity of neural morphology varying in cell types, our work suggests that the functional role of NMDARs is not stereotyped but highly interwoven with local properties of neuronal structure.
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Affiliation(s)
- Yuanhong Tang
- Institute for Artificial Intelligence, Department of Computer Science and Technology, Peking University, Beijing, China
| | - Xingyu Zhang
- Guangzhou Institute of Technology, Xidian University, Guangzhou, China
| | - Lingling An
- School of Computer Science and Technology, Xidian University, Xi'an, China
| | - Zhaofei Yu
- Institute for Artificial Intelligence, Department of Computer Science and Technology, Peking University, Beijing, China
| | - Jian K Liu
- School of Computing, University of Leeds, Leeds, United Kingdom
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12
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Yoshikai Y, Zheng T, Kotani K, Jimbo Y. Macroscopic Gamma Oscillation With Bursting Neuron Model Under Stochastic Fluctuation. Neural Comput 2023; 35:645-670. [PMID: 36827587 DOI: 10.1162/neco_a_01570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Accepted: 10/30/2022] [Indexed: 02/26/2023]
Abstract
Gamma oscillations are thought to play a role in information processing in the brain. Bursting neurons, which exhibit periodic clusters of spiking activity, are a type of neuron that are thought to contribute largely to gamma oscillations. However, little is known about how the properties of bursting neurons affect the emergence of gamma oscillation, its waveforms, and its synchronized characteristics, especially when subjected to stochastic fluctuations. In this study, we proposed a bursting neuron model that can analyze the bursting ratio and the phase response function. Then we theoretically analyzed the neuronal population dynamics composed of bursting excitatory neurons, mixed with inhibitory neurons. The bifurcation analysis of the equivalent Fokker-Planck equation exhibits three types of gamma oscillations of unimodal firing, bimodal firing in the inhibitory population, and bimodal firing in the excitatory population under different interaction strengths. The analyses of the macroscopic phase response function by the adjoint method of the Fokker-Planck equation revealed that the inhibitory doublet facilitates synchronization of the high-frequency oscillations. When we keep the strength of interactions constant, decreasing the bursting ratio of the individual neurons increases the relative high-gamma component of the populational phase-coupling functions. This also improves the ability of the neuronal population model to synchronize with faster oscillatory input. The analytical frameworks in this study provide insight into nontrivial dynamics of the population of bursting neurons, which further suggest that bursting neurons have an important role in rhythmic activities.
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Affiliation(s)
- Yuto Yoshikai
- Graduate School of Engineering, University of Tokyo, Bunkyo-Ku, Tokyo 113-0033, Japan
| | - Tianyi Zheng
- Graduate School of Engineering, University of Tokyo, Bunkyo-Ku, Tokyo 113-0033, Japan
| | - Kiyoshi Kotani
- Research Center for Advanced Science and Technology, University of Tokyo, Meguro-ku, Tokyo 153-8904, Japan
| | - Yasuhiko Jimbo
- Graduate School of Engineering, University of Tokyo, Bunkyo-Ku, Tokyo 113-0033, Japan
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13
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Shao F, Shen Z. How can artificial neural networks approximate the brain? Front Psychol 2023; 13:970214. [PMID: 36698593 PMCID: PMC9868316 DOI: 10.3389/fpsyg.2022.970214] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Accepted: 11/28/2022] [Indexed: 01/11/2023] Open
Abstract
The article reviews the history development of artificial neural networks (ANNs), then compares the differences between ANNs and brain networks in their constituent unit, network architecture, and dynamic principle. The authors offer five points of suggestion for ANNs development and ten questions to be investigated further for the interdisciplinary field of brain simulation. Even though brain is a super-complex system with 1011 neurons, its intelligence does depend rather on the neuronal type and their energy supply mode than the number of neurons. It might be possible for ANN development to follow a new direction that is a combination of multiple modules with different architecture principle and multiple computation, rather than very large scale of neural networks with much more uniformed units and hidden layers.
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Affiliation(s)
- Feng Shao
- Beijing Key Laboratory of Behavior and Mental Health, School of Psychological and Cognitive Sciences, Peking University, Beijing, China
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14
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Trepka EB, Zhu S, Xia R, Chen X, Moore T. Functional interactions among neurons within single columns of macaque V1. eLife 2022; 11:e79322. [PMID: 36321687 PMCID: PMC9662816 DOI: 10.7554/elife.79322] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Accepted: 10/30/2022] [Indexed: 11/16/2022] Open
Abstract
Recent developments in high-density neurophysiological tools now make it possible to record from hundreds of single neurons within local, highly interconnected neural networks. Among the many advantages of such recordings is that they dramatically increase the quantity of identifiable, functional interactions between neurons thereby providing an unprecedented view of local circuits. Using high-density, Neuropixels recordings from single neocortical columns of primary visual cortex in nonhuman primates, we identified 1000s of functionally interacting neuronal pairs using established crosscorrelation approaches. Our results reveal clear and systematic variations in the synchrony and strength of functional interactions within single cortical columns. Despite neurons residing within the same column, both measures of interactions depended heavily on the vertical distance separating neuronal pairs, as well as on the similarity of stimulus tuning. In addition, we leveraged the statistical power afforded by the large numbers of functionally interacting pairs to categorize interactions between neurons based on their crosscorrelation functions. These analyses identified distinct, putative classes of functional interactions within the full population. These classes of functional interactions were corroborated by their unique distributions across defined laminar compartments and were consistent with known properties of V1 cortical circuitry, such as the lead-lag relationship between simple and complex cells. Our results provide a clear proof-of-principle for the use of high-density neurophysiological recordings to assess circuit-level interactions within local neuronal networks.
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Affiliation(s)
- Ethan B Trepka
- Department of Neurobiology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
- Neurosciences Program, Stanford UniversityStanfordUnited States
| | - Shude Zhu
- Department of Neurobiology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Ruobing Xia
- Department of Neurobiology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Xiaomo Chen
- Department of Neurobiology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
- Center for Neuroscience, Department of Neurobiology, Physiology, and Behavior, University of California, DavisDavisUnited States
| | - Tirin Moore
- Department of Neurobiology, Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
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15
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Han C, Shapley R, Xing D. Gamma rhythms in the visual cortex: functions and mechanisms. Cogn Neurodyn 2022; 16:745-756. [PMID: 35847544 PMCID: PMC9279528 DOI: 10.1007/s11571-021-09767-x] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2021] [Revised: 11/09/2021] [Accepted: 12/05/2021] [Indexed: 01/18/2023] Open
Abstract
Gamma-band activity, peaking around 30-100 Hz in the local field potential's power spectrum, has been found and intensively studied in many brain regions. Although gamma is thought to play a critical role in processing neural information in the brain, its cognitive functions and neural mechanisms remain unclear or debatable. Experimental studies showed that gamma rhythms are stochastic in time and vary with visual stimuli. Recent studies further showed that multiple rhythms coexist in V1 with distinct origins in different species. While all these experimental facts are a challenge for understanding the functions of gamma in the visual cortex, there are many signs of progress in computational studies. This review summarizes and discusses studies on gamma in the visual cortex from multiple perspectives and concludes that gamma rhythms are still a mystery. Combining experimental and computational studies seems the best way forward in the future.
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Affiliation(s)
- Chuanliang Han
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875 China
| | - Robert Shapley
- Center for Neural Science, New York University, New York, NY USA
| | - Dajun Xing
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing, 100875 China
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16
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Liu XP, Wang X. Distinct neuronal types contribute to hybrid temporal encoding strategies in primate auditory cortex. PLoS Biol 2022; 20:e3001642. [PMID: 35613218 PMCID: PMC9132345 DOI: 10.1371/journal.pbio.3001642] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2021] [Accepted: 04/22/2022] [Indexed: 11/18/2022] Open
Abstract
Studies of the encoding of sensory stimuli by the brain often consider recorded neurons as a pool of identical units. Here, we report divergence in stimulus-encoding properties between subpopulations of cortical neurons that are classified based on spike timing and waveform features. Neurons in auditory cortex of the awake marmoset (Callithrix jacchus) encode temporal information with either stimulus-synchronized or nonsynchronized responses. When we classified single-unit recordings using either a criteria-based or an unsupervised classification method into regular-spiking, fast-spiking, and bursting units, a subset of intrinsically bursting neurons formed the most highly synchronized group, with strong phase-locking to sinusoidal amplitude modulation (SAM) that extended well above 20 Hz. In contrast with other unit types, these bursting neurons fired primarily on the rising phase of SAM or the onset of unmodulated stimuli, and preferred rapid stimulus onset rates. Such differentiating behavior has been previously reported in bursting neuron models and may reflect specializations for detection of acoustic edges. These units responded to natural stimuli (vocalizations) with brief and precise spiking at particular time points that could be decoded with high temporal stringency. Regular-spiking units better reflected the shape of slow modulations and responded more selectively to vocalizations with overall firing rate increases. Population decoding using time-binned neural activity found that decoding behavior differed substantially between regular-spiking and bursting units. A relatively small pool of bursting units was sufficient to identify the stimulus with high accuracy in a manner that relied on the temporal pattern of responses. These unit type differences may contribute to parallel and complementary neural codes. Neurons in auditory cortex show highly diverse responses to sounds. This study suggests that neuronal type inferred from baseline firing properties accounts for much of this diversity, with a subpopulation of bursting units being specialized for precise temporal encoding.
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Affiliation(s)
- Xiao-Ping Liu
- Laboratory of Auditory Neurophysiology, Department of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America
- * E-mail: (X-PL); (XW)
| | - Xiaoqin Wang
- Laboratory of Auditory Neurophysiology, Department of Biomedical Engineering, Johns Hopkins University School of Medicine, Baltimore, Maryland, United States of America
- * E-mail: (X-PL); (XW)
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17
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Nashef A, Cohen O, Perlmutter SI, Prut Y. A cerebellar origin of feedforward inhibition to the motor cortex in non-human primates. Cell Rep 2022; 39:110803. [PMID: 35545040 DOI: 10.1016/j.celrep.2022.110803] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2021] [Revised: 02/02/2022] [Accepted: 04/20/2022] [Indexed: 02/07/2023] Open
Abstract
Voluntary movements are driven by coordinated activity across a large population of motor cortical neurons. Formation of this activity is controlled by local interactions and long-range inputs. How remote areas of the brain communicate with motor cortical neurons to effectively drive movement remains unclear. We address this question by studying the cerebellar-thalamocortical system. We find that thalamic input to the motor cortex triggers feedforward inhibition by contacting inhibitory cells via highly effective GluR2-lacking AMPA receptors and that, during task performance, the activity of parvalbumin (PV) and pyramidal cells exhibits relations comparable with movement parameters. We also find that the movement-related activity of PV interneurons precedes firing of pyramidal cells. This counterintuitive sequence of events, where inhibitory cells are recruited more strongly and before excitatory cells, may amplify the cortical effect of cerebellar signals in a way that exceeds their sheer synaptic efficacy by suppressing other inputs.
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Affiliation(s)
- Abdulraheem Nashef
- Department of Medical Neurobiology, IMRIC and ELSC, The Hebrew University, Hadassah Medical School, Jerusalem 9112102, Israel
| | - Oren Cohen
- Department of Medical Neurobiology, IMRIC and ELSC, The Hebrew University, Hadassah Medical School, Jerusalem 9112102, Israel
| | - Steve I Perlmutter
- Department of Physiology & Biophysics and Washington National Primate Research Center, University of Washington, Box 357330, Seattle, WA 98195, USA
| | - Yifat Prut
- Department of Medical Neurobiology, IMRIC and ELSC, The Hebrew University, Hadassah Medical School, Jerusalem 9112102, Israel.
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18
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Spyropoulos G, Saponati M, Dowdall JR, Schölvinck ML, Bosman CA, Lima B, Peter A, Onorato I, Klon-Lipok J, Roese R, Neuenschwander S, Fries P, Vinck M. Spontaneous variability in gamma dynamics described by a damped harmonic oscillator driven by noise. Nat Commun 2022; 13:2019. [PMID: 35440540 PMCID: PMC9018758 DOI: 10.1038/s41467-022-29674-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Accepted: 03/14/2022] [Indexed: 11/13/2022] Open
Abstract
Circuits of excitatory and inhibitory neurons generate gamma-rhythmic activity (30-80 Hz). Gamma-cycles show spontaneous variability in amplitude and duration. To investigate the mechanisms underlying this variability, we recorded local-field-potentials (LFPs) and spikes from awake macaque V1. We developed a noise-robust method to detect gamma-cycle amplitudes and durations, which showed a weak but positive correlation. This correlation, and the joint amplitude-duration distribution, is well reproduced by a noise-driven damped harmonic oscillator. This model accurately fits LFP power-spectra, is equivalent to a linear, noise-driven E-I circuit, and recapitulates two additional features of gamma: (1) Amplitude-duration correlations decrease with oscillation strength; (2) amplitudes and durations exhibit strong and weak autocorrelations, respectively, depending on oscillation strength. Finally, longer gamma-cycles are associated with stronger spike-synchrony, but lower spike-rates in both (putative) excitatory and inhibitory neurons. In sum, V1 gamma-dynamics are well described by the simplest possible model of gamma: A damped harmonic oscillator driven by noise.
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Affiliation(s)
- Georgios Spyropoulos
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany.
| | - Matteo Saponati
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- International Max Planck Research School for Neural Circuits, Frankfurt Am Main, Germany
| | - Jarrod Robert Dowdall
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- International Max Planck Research School for Neural Circuits, Frankfurt Am Main, Germany
| | - Marieke Louise Schölvinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
| | - Conrado Arturo Bosman
- Donders Institute for Brain, Cognition and Behaviour, Radboud University, 6525 EN, Nijmegen, the Netherlands
- Swammerdam Institute for Life Sciences, Center for Neuroscience, Faculty of Science, University of Amsterdam, 1098 XH, Amsterdam, the Netherlands
| | - Bruss Lima
- Max Planck Institute for Brain Research, 60438, Frankfurt, Germany
- Carlos Chagas Filho Institute of Biophysics, Federal University of Rio de Janeiro, 21941-902, Rio de Janeiro, Brazil
| | - Alina Peter
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- International Max Planck Research School for Neural Circuits, Frankfurt Am Main, Germany
| | - Irene Onorato
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- International Max Planck Research School for Neural Circuits, Frankfurt Am Main, Germany
| | - Johanna Klon-Lipok
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
- Max Planck Institute for Brain Research, 60438, Frankfurt, Germany
| | - Rasmus Roese
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany
| | - Sergio Neuenschwander
- Max Planck Institute for Brain Research, 60438, Frankfurt, Germany
- Brain Institute, Federal University of Rio Grande do Norte, 59056-450, Natal, Brazil
| | - Pascal Fries
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany.
- Donders Institute for Brain, Cognition and Behaviour, Radboud University, 6525 EN, Nijmegen, the Netherlands.
| | - Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528, Frankfurt, Germany.
- Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University, 6525 EN, Nijmegen, the Netherlands.
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19
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Uran C, Peter A, Lazar A, Barnes W, Klon-Lipok J, Shapcott KA, Roese R, Fries P, Singer W, Vinck M. Predictive coding of natural images by V1 firing rates and rhythmic synchronization. Neuron 2022; 110:1240-1257.e8. [PMID: 35120628 PMCID: PMC8992798 DOI: 10.1016/j.neuron.2022.01.002] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2021] [Revised: 11/22/2021] [Accepted: 01/04/2022] [Indexed: 01/12/2023]
Abstract
Predictive coding is an important candidate theory of self-supervised learning in the brain. Its central idea is that sensory responses result from comparisons between bottom-up inputs and contextual predictions, a process in which rates and synchronization may play distinct roles. We recorded from awake macaque V1 and developed a technique to quantify stimulus predictability for natural images based on self-supervised, generative neural networks. We find that neuronal firing rates were mainly modulated by the contextual predictability of higher-order image features, which correlated strongly with human perceptual similarity judgments. By contrast, V1 gamma (γ)-synchronization increased monotonically with the contextual predictability of low-level image features and emerged exclusively for larger stimuli. Consequently, γ-synchronization was induced by natural images that are highly compressible and low-dimensional. Natural stimuli with low predictability induced prominent, late-onset beta (β)-synchronization, likely reflecting cortical feedback. Our findings reveal distinct roles of synchronization and firing rates in the predictive coding of natural images.
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Affiliation(s)
- Cem Uran
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany; Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University Nijmegen, 6525 AJ Nijmegen, the Netherlands.
| | - Alina Peter
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany
| | - Andreea Lazar
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany
| | - William Barnes
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany; Max Planck Institute for Brain Research, 60438 Frankfurt, Germany
| | - Johanna Klon-Lipok
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany; Max Planck Institute for Brain Research, 60438 Frankfurt, Germany
| | - Katharine A Shapcott
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany; Frankfurt Institute for Advanced Studies, 60438 Frankfurt, Germany
| | - Rasmus Roese
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany
| | - Pascal Fries
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany; Donders Institute for Brain, Cognition and Behaviour, Department of Biophysics, Radboud University Nijmegen, 6525 AJ Nijmegen, the Netherlands
| | - Wolf Singer
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany; Max Planck Institute for Brain Research, 60438 Frankfurt, Germany; Frankfurt Institute for Advanced Studies, 60438 Frankfurt, Germany
| | - Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt, Germany; Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University Nijmegen, 6525 AJ Nijmegen, the Netherlands.
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20
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Schneider M, Broggini AC, Dann B, Tzanou A, Uran C, Sheshadri S, Scherberger H, Vinck M. A mechanism for inter-areal coherence through communication based on connectivity and oscillatory power. Neuron 2021; 109:4050-4067.e12. [PMID: 34637706 PMCID: PMC8691951 DOI: 10.1016/j.neuron.2021.09.037] [Citation(s) in RCA: 65] [Impact Index Per Article: 21.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2020] [Revised: 07/14/2021] [Accepted: 09/17/2021] [Indexed: 11/21/2022]
Abstract
Inter-areal coherence between field potentials is a widespread phenomenon in cortex. Coherence has been hypothesized to reflect phase-synchronization between oscillators and flexibly gate communication according to behavioral and cognitive demands. We reveal an alternative mechanism where coherence is not the cause but the consequence of communication and naturally emerges because spiking activity in a sending area causes post-synaptic potentials both in the same and in other areas. Consequently, coherence depends in a lawful manner on power and phase-locking in the sender and connectivity. Changes in oscillatory power explained prominent changes in fronto-parietal and LGN-V1 coherence across behavioral conditions. Optogenetic experiments and excitatory-inhibitory network simulations identified afferent synaptic inputs rather than spiking entrainment as the principal determinant of coherence. These findings suggest that unique spectral profiles of different brain areas automatically give rise to large-scale coherence patterns that follow anatomical connectivity and continuously reconfigure as a function of behavior and cognition.
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Affiliation(s)
- Marius Schneider
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands.
| | - Ana Clara Broggini
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany
| | | | - Athanasia Tzanou
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany
| | - Cem Uran
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany
| | - Swathi Sheshadri
- German Primate Center, 37077 Göttingen, Germany; Faculty of Biology and Psychology, University of Goettingen, 37073 Goettingen, Germany
| | - Hansjörg Scherberger
- German Primate Center, 37077 Göttingen, Germany; Faculty of Biology and Psychology, University of Goettingen, 37073 Goettingen, Germany
| | - Martin Vinck
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, 60528 Frankfurt am Main, Germany; Donders Centre for Neuroscience, Department of Neuroinformatics, Radboud University Nijmegen, 6525 Nijmegen, the Netherlands.
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21
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Narrow and Broad γ Bands Process Complementary Visual Information in Mouse Primary Visual Cortex. eNeuro 2021; 8:ENEURO.0106-21.2021. [PMID: 34663617 PMCID: PMC8570688 DOI: 10.1523/eneuro.0106-21.2021] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2021] [Revised: 06/03/2021] [Accepted: 06/22/2021] [Indexed: 11/21/2022] Open
Abstract
γ Band plays a key role in the encoding of visual features in the primary visual cortex (V1). In rodents V1 two ranges within the γ band are sensitive to contrast: a broad γ band (BB) increasing with contrast, and a narrow γ band (NB), peaking at ∼60 Hz, decreasing with contrast. The functional roles of the two bands and the neural circuits originating them are not completely clear yet. Here, we show, combining experimental and simulated data, that in mice V1 (1) BB carries information about high contrast and NB about low contrast; (2) BB modulation depends on excitatory-inhibitory interplay in the cortex, while NB modulation is because of entrainment to the thalamic drive. In awake mice presented with alternating gratings, NB power progressively decreased from low to intermediate levels of contrast where it reached a plateau. Conversely, BB power was constant across low levels of contrast, but it progressively increased from intermediate to high levels of contrast. Furthermore, BB response was stronger immediately after contrast reversal, while the opposite held for NB. These complementary modulations were reproduced by a recurrent excitatory-inhibitory leaky integrate-and-fire network provided that the thalamic inputs were composed of a sustained and a periodic component having complementary sensitivity ranges. These results show that in rodents the thalamic-driven NB plays a specific key role in encoding visual contrast. Moreover, we propose a simple and effective network model of response to visual stimuli in rodents that might help in investigating network dysfunctions of pathologic visual information processing.
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22
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Lee E, Lee S, Shin JJ, Choi W, Chung C, Lee S, Kim J, Ha S, Kim R, Yoo T, Yoo YE, Kim J, Noh YW, Rhim I, Lee SY, Kim W, Lee T, Shin H, Cho IJ, Deisseroth K, Kim SJ, Park JM, Jung MW, Paik SB, Kim E. Excitatory synapses and gap junctions cooperate to improve Pv neuronal burst firing and cortical social cognition in Shank2-mutant mice. Nat Commun 2021; 12:5116. [PMID: 34433814 PMCID: PMC8387434 DOI: 10.1038/s41467-021-25356-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2020] [Accepted: 08/05/2021] [Indexed: 02/07/2023] Open
Abstract
NMDA receptor (NMDAR) and GABA neuronal dysfunctions are observed in animal models of autism spectrum disorders, but how these dysfunctions impair social cognition and behavior remains unclear. We report here that NMDARs in cortical parvalbumin (Pv)-positive interneurons cooperate with gap junctions to promote high-frequency (>80 Hz) Pv neuronal burst firing and social cognition. Shank2–/– mice, displaying improved sociability upon NMDAR activation, show impaired cortical social representation and inhibitory neuronal burst firing. Cortical Shank2–/– Pv neurons show decreased NMDAR activity, which suppresses the cooperation between NMDARs and gap junctions (GJs) for normal burst firing. Shank2–/– Pv neurons show compensatory increases in GJ activity that are not sufficient for social rescue. However, optogenetic boosting of Pv neuronal bursts, requiring GJs, rescues cortical social cognition in Shank2–/– mice, similar to the NMDAR-dependent social rescue. Therefore, NMDARs and gap junctions cooperate to promote cortical Pv neuronal bursts and social cognition. How NMDAR and GABA neuronal dysfunctions result in impaired social behaviour is unclear. Here, the authors show that NMDARs and gap junctions in cortical PV interneurons modulate burst firing, affecting social behaviour.
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Affiliation(s)
- Eunee Lee
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea.,Department of Anatomy, College of Medicine, Yonsei University, Seoul, Korea
| | - Seungjoon Lee
- Department of Biological Sciences, KAIST, Daejeon, Korea
| | - Jae Jin Shin
- Department of Brain and Cognitive Science, College of Natural Science, Seoul National University, Seoul, Korea.,Center for Cognition and Sociality, Institute for Basic Science (IBS), Daejeon, Korea
| | - Woochul Choi
- Program of Brain and Cognitive Engineering, Department of Bio and Brain Engineering, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, Korea
| | - Changuk Chung
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea
| | - Suho Lee
- Department of Biological Sciences, KAIST, Daejeon, Korea
| | - Jihye Kim
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea
| | - Seungmin Ha
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea
| | - Ryunhee Kim
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea
| | - Taesun Yoo
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea
| | - Ye-Eun Yoo
- Department of Biological Sciences, KAIST, Daejeon, Korea
| | - Jisoo Kim
- Department of Biological Sciences, KAIST, Daejeon, Korea
| | - Young Woo Noh
- Department of Biological Sciences, KAIST, Daejeon, Korea
| | - Issac Rhim
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea
| | - Soo Yeon Lee
- Department of Biological Sciences, KAIST, Daejeon, Korea
| | - Woohyun Kim
- Department of Biological Sciences, KAIST, Daejeon, Korea
| | - Taekyung Lee
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea
| | - Hyogeun Shin
- Center for BioMicrosystems, Brain Science Institute, Korea Institute of Science and Technology (KIST), Seoul, Korea
| | - Il-Joo Cho
- Center for BioMicrosystems, Brain Science Institute, Korea Institute of Science and Technology (KIST), Seoul, Korea
| | - Karl Deisseroth
- Department of Bioengineering, Department of Psychiatry and Behavioral Sciences, Howard Hughes Medical Institute, Stanford University, Stanford, CA, USA
| | - Sang Jeong Kim
- Department of Physiology, College of Medicine, Seoul National University, Seoul, Korea
| | - Joo Min Park
- Center for Cognition and Sociality, Institute for Basic Science (IBS), Daejeon, Korea.
| | - Min Whan Jung
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea. .,Department of Biological Sciences, KAIST, Daejeon, Korea.
| | - Se-Bum Paik
- Program of Brain and Cognitive Engineering, Department of Bio and Brain Engineering, Korea Advanced Institute for Science and Technology (KAIST), Daejeon, Korea.
| | - Eunjoon Kim
- Center for Synaptic Brain Dysfunctions, Institute for Basic Science (IBS), Daejeon, Korea. .,Department of Biological Sciences, KAIST, Daejeon, Korea.
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23
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Singer W. Recurrent dynamics in the cerebral cortex: Integration of sensory evidence with stored knowledge. Proc Natl Acad Sci U S A 2021; 118:e2101043118. [PMID: 34362837 PMCID: PMC8379985 DOI: 10.1073/pnas.2101043118] [Citation(s) in RCA: 34] [Impact Index Per Article: 11.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022] Open
Abstract
Current concepts of sensory processing in the cerebral cortex emphasize serial extraction and recombination of features in hierarchically structured feed-forward networks in order to capture the relations among the components of perceptual objects. These concepts are implemented in convolutional deep learning networks and have been validated by the astounding similarities between the functional properties of artificial systems and their natural counterparts. However, cortical architectures also display an abundance of recurrent coupling within and between the layers of the processing hierarchy. This massive recurrence gives rise to highly complex dynamics whose putative function is poorly understood. Here a concept is proposed that assigns specific functions to the dynamics of cortical networks and combines, in a unifying approach, the respective advantages of recurrent and feed-forward processing. It is proposed that the priors about regularities of the world are stored in the weight distributions of feed-forward and recurrent connections and that the high-dimensional, dynamic space provided by recurrent interactions is exploited for computations. These comprise the ultrafast matching of sensory evidence with the priors covertly represented in the correlation structure of spontaneous activity and the context-dependent grouping of feature constellations characterizing natural objects. The concept posits that information is encoded not only in the discharge frequency of neurons but also in the precise timing relations among the discharges. Results of experiments designed to test the predictions derived from this concept support the hypothesis that cerebral cortex exploits the high-dimensional recurrent dynamics for computations serving predictive coding.
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Affiliation(s)
- Wolf Singer
- Ernst Strüngmann Institute for Neuroscience in Cooperation with Max Planck Society, Frankfurt am Main 60438, Germany;
- Max Planck Institute for Brain Research, Frankfurt am Main 60438, Germany
- Frankfurt Institute for Advanced Studies, Frankfurt am Main 60438, Germany
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24
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Lee EK, Balasubramanian H, Tsolias A, Anakwe SU, Medalla M, Shenoy KV, Chandrasekaran C. Non-linear dimensionality reduction on extracellular waveforms reveals cell type diversity in premotor cortex. eLife 2021; 10:e67490. [PMID: 34355695 PMCID: PMC8452311 DOI: 10.7554/elife.67490] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2021] [Accepted: 08/04/2021] [Indexed: 11/13/2022] Open
Abstract
Cortical circuits are thought to contain a large number of cell types that coordinate to produce behavior. Current in vivo methods rely on clustering of specified features of extracellular waveforms to identify putative cell types, but these capture only a small amount of variation. Here, we develop a new method (WaveMAP) that combines non-linear dimensionality reduction with graph clustering to identify putative cell types. We apply WaveMAP to extracellular waveforms recorded from dorsal premotor cortex of macaque monkeys performing a decision-making task. Using WaveMAP, we robustly establish eight waveform clusters and show that these clusters recapitulate previously identified narrow- and broad-spiking types while revealing previously unknown diversity within these subtypes. The eight clusters exhibited distinct laminar distributions, characteristic firing rate patterns, and decision-related dynamics. Such insights were weaker when using feature-based approaches. WaveMAP therefore provides a more nuanced understanding of the dynamics of cell types in cortical circuits.
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Affiliation(s)
- Eric Kenji Lee
- Psychological and Brain Sciences, Boston UniversityBostonUnited States
| | - Hymavathy Balasubramanian
- Bernstein Center for Computational Neuroscience, Bernstein Center for Computational NeuroscienceBerlinGermany
| | - Alexandra Tsolias
- Department of Anatomy and Neurobiology, Boston UniversityBostonUnited States
| | | | - Maria Medalla
- Department of Anatomy and Neurobiology, Boston UniversityBostonUnited States
| | - Krishna V Shenoy
- Department of Electrical Engineering, Stanford UniversityStanfordUnited States
- Department of Bioengineering, Stanford UniversityStanfordUnited States
- Department of Neurobiology, Stanford UniversityStanfordUnited States
- Wu Tsai Neurosciences Institute, Stanford UniversityStanfordUnited States
- Bio-X Institute, Stanford UniversityStanfordUnited States
- Howard Hughes Medical Institute, Stanford UniversityStanfordUnited States
| | - Chandramouli Chandrasekaran
- Psychological and Brain Sciences, Boston UniversityBostonUnited States
- Department of Anatomy and Neurobiology, Boston UniversityBostonUnited States
- Center for Systems Neuroscience, Boston UniversityBostonUnited States
- Department of Biomedical Engineering, Boston UniversityBostonUnited States
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25
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Banaie Boroujeni K, Tiesinga P, Womelsdorf T. Interneuron-specific gamma synchronization indexes cue uncertainty and prediction errors in lateral prefrontal and anterior cingulate cortex. eLife 2021; 10:69111. [PMID: 34142661 PMCID: PMC8248985 DOI: 10.7554/elife.69111] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 06/17/2021] [Indexed: 12/27/2022] Open
Abstract
Inhibitory interneurons are believed to realize critical gating functions in cortical circuits, but it has been difficult to ascertain the content of gated information for well-characterized interneurons in primate cortex. Here, we address this question by characterizing putative interneurons in primate prefrontal and anterior cingulate cortex while monkeys engaged in attention demanding reversal learning. We find that subclasses of narrow spiking neurons have a relative suppressive effect on the local circuit indicating they are inhibitory interneurons. One of these interneuron subclasses showed prominent firing rate modulations and (35–45 Hz) gamma synchronous spiking during periods of uncertainty in both, lateral prefrontal cortex (LPFC) and anterior cingulate cortex (ACC). In LPFC, this interneuron subclass activated when the uncertainty of attention cues was resolved during flexible learning, whereas in ACC it fired and gamma-synchronized when outcomes were uncertain and prediction errors were high during learning. Computational modeling of this interneuron-specific gamma band activity in simple circuit motifs suggests it could reflect a soft winner-take-all gating of information having high degree of uncertainty. Together, these findings elucidate an electrophysiologically characterized interneuron subclass in the primate, that forms gamma synchronous networks in two different areas when resolving uncertainty during adaptive goal-directed behavior.
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Affiliation(s)
| | - Paul Tiesinga
- Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen, Nijmegen, Netherlands
| | - Thilo Womelsdorf
- Department of Psychology, Vanderbilt University, Nashville, United States.,Department of Biology, Centre for Vision Research, York University, Toronto, Canada
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26
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Ji MH, He X, Shen JC, Yang JJ. Aging-Related Neural Disruption Might Predispose to Postoperative Cognitive Impairment Following Surgical Trauma. J Alzheimers Dis 2021; 81:1685-1699. [PMID: 33967044 DOI: 10.3233/jad-201590] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
BACKGROUND Accumulating evidence has demonstrated that aging is associated with an exaggerated response to surgical trauma together with cognitive impairments. This has significant implications for the development of clinical phenotype such as perioperative neurocognitive disorders (PND), which is a common complication following surgery, especially for the elderly. However, the mechanism by which aging brain is vulnerable to surgical trauma remains to be elucidated. OBJECTIVE To test whether age-related alterations in hippocampal network activities contribute to increased risk of PND following surgery. METHODS Thirty-two adult and seventy-two aged male C57BL/6 mice undergone sevoflurane anesthesia and exploratory laparotomy were used to mimic human abdominal surgery. For the interventional study, mice were treated with minocycline. Behavioral tests were performed post-surgery with open field, novel object recognition and fear conditioning tests, respectively. The brain tissues were then harvested and subjected to biochemistry studies. Local field potential (LFP) recording was performed in another separate experiment. RESULTS Aged mice displayed signs of neuroinflammation, as reflected by significantly increased proinflammatory mediators in the hippocampus. Also, aged mice displayed persistently decreased oscillation activities under different conditions, both before and after surgery. Further correlation analysis suggested that theta power was positively associated with time with novel object, while γ oscillation activity was positively associated with freezing time to context. Of note, downregulation of neuroinflammation by microglia inhibitor minocycline reversed some of these abnormities. CONCLUSION Our study highlights that age-related hippocampal oscillation dysregulation increases the risk of PND incidence, which might provide diagnostic/prognostic biomarkers for PND and possible other neurodegenerative diseases.
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Affiliation(s)
- Mu-Huo Ji
- Department of Anesthesiology, the Second Affiliated Hospital of Nanjing Medical University, Nanjing, China
| | - Xue He
- Department of Anesthesiology, Jinling Hospital, School of Medicine, Nanjing University, Nanjing, China
| | - Jin-Chun Shen
- Department of Anesthesiology, Jinling Hospital, School of Medicine, Nanjing University, Nanjing, China
| | - Jian-Jun Yang
- Department of Anesthesiology, Pain and Perioperative Medicine, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China
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27
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Is there a “g-neuron”? Establishing a systematic link between general intelligence (g) and the von Economo neuron. INTELLIGENCE 2021. [DOI: 10.1016/j.intell.2021.101540] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
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28
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Lewis CM, Ni J, Wunderle T, Jendritza P, Lazar A, Diester I, Fries P. Cortical gamma-band resonance preferentially transmits coherent input. Cell Rep 2021; 35:109083. [PMID: 33951439 PMCID: PMC8200519 DOI: 10.1016/j.celrep.2021.109083] [Citation(s) in RCA: 22] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Revised: 02/28/2021] [Accepted: 04/13/2021] [Indexed: 12/05/2022] Open
Abstract
Synchronization has been implicated in neuronal communication, but causal evidence remains indirect. We use optogenetics to generate depolarizing currents in pyramidal neurons of the cat visual cortex, emulating excitatory synaptic inputs under precise temporal control, while measuring spike output. The cortex transforms constant excitation into strong gamma-band synchronization, revealing the well-known cortical resonance. Increasing excitation with ramps increases the strength and frequency of synchronization. Slow, symmetric excitation profiles reveal hysteresis of power and frequency. White-noise input sequences enable causal analysis of network transmission, establishing that the cortical gamma-band resonance preferentially transmits coherent input components. Models composed of recurrently coupled excitatory and inhibitory units uncover a crucial role of feedback inhibition and suggest that hysteresis can arise through spike-frequency adaptation. The presented approach provides a powerful means to investigate the resonance properties of local circuits and probe how these properties transform input and shape transmission. Rhythmic synchronization has been implicated in neuronal communication, yet causal evidence has remained scarce. Lewis et al. optogenetically stimulate the visual cortex to emulate synaptic input while recording spike output. Cortex resonates at the gamma band (30–90 Hz) and preferentially transmits input that is coherent to the ongoing gamma-band rhythm.
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Affiliation(s)
- Christopher Murphy Lewis
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Deutschordenstraße 46, 60528 Frankfurt, Germany; Brain Research Institute, University of Zurich, Winterthurerstrasse 190, 8057 Zurich, Switzerland.
| | - Jianguang Ni
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Deutschordenstraße 46, 60528 Frankfurt, Germany; International Max Planck Research School for Neural Circuits, Max-von-Laue-Straße 4, 60438 Frankfurt, Germany
| | - Thomas Wunderle
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Deutschordenstraße 46, 60528 Frankfurt, Germany
| | - Patrick Jendritza
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Deutschordenstraße 46, 60528 Frankfurt, Germany; International Max Planck Research School for Neural Circuits, Max-von-Laue-Straße 4, 60438 Frankfurt, Germany
| | - Andreea Lazar
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Deutschordenstraße 46, 60528 Frankfurt, Germany
| | - Ilka Diester
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Deutschordenstraße 46, 60528 Frankfurt, Germany
| | - Pascal Fries
- Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, Deutschordenstraße 46, 60528 Frankfurt, Germany; Donders Institute for Brain, Cognition and Behaviour, Radboud University Nijmegen, Kapittelweg 29, 6525 EN Nijmegen, the Netherlands.
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29
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Mosher CP, Wei Y, Kamiński J, Nandi A, Mamelak AN, Anastassiou CA, Rutishauser U. Cellular Classes in the Human Brain Revealed In Vivo by Heartbeat-Related Modulation of the Extracellular Action Potential Waveform. Cell Rep 2021; 30:3536-3551.e6. [PMID: 32160555 DOI: 10.1016/j.celrep.2020.02.027] [Citation(s) in RCA: 29] [Impact Index Per Article: 9.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/09/2019] [Revised: 12/23/2019] [Accepted: 02/05/2020] [Indexed: 01/01/2023] Open
Abstract
Determining cell types is critical for understanding neural circuits but remains elusive in the living human brain. Current approaches discriminate units into putative cell classes using features of the extracellular action potential (EAP); in absence of ground truth data, this remains a problematic procedure. We find that EAPs in deep structures of the brain exhibit robust and systematic variability during the cardiac cycle. These cardiac-related features refine neural classification. We use these features to link bio-realistic models generated from in vitro human whole-cell recordings of morphologically classified neurons to in vivo recordings. We differentiate aspiny inhibitory and spiny excitatory human hippocampal neurons and, in a second stage, demonstrate that cardiac-motion features reveal two types of spiny neurons with distinct intrinsic electrophysiological properties and phase-locking characteristics to endogenous oscillations. This multi-modal approach markedly improves cell classification in humans, offers interpretable cell classes, and is applicable to other brain areas and species.
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Affiliation(s)
- Clayton P Mosher
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA
| | - Yina Wei
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - Jan Kamiński
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA; Division of Biology and Biological Engineering, Caltech, Pasadena, CA 91125, USA
| | - Anirban Nandi
- Allen Institute for Brain Science, Seattle, WA 98109, USA
| | - Adam N Mamelak
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA
| | - Costas A Anastassiou
- Allen Institute for Brain Science, Seattle, WA 98109, USA; Division of Neurology, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.
| | - Ueli Rutishauser
- Department of Neurosurgery, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA; Center for Neural Science and Medicine, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA; Department of Neurology, Cedars-Sinai Medical Center, Los Angeles, CA 90048, USA; Division of Biology and Biological Engineering, Caltech, Pasadena, CA 91125, USA.
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30
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Sun SH, Almasi A, Yunzab M, Zehra S, Hicks DG, Kameneva T, Ibbotson MR, Meffin H. Analysis of extracellular spike waveforms and associated receptive fields of neurons in cat primary visual cortex. J Physiol 2021; 599:2211-2238. [PMID: 33501669 DOI: 10.1113/jp280844] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Accepted: 01/12/2021] [Indexed: 12/11/2022] Open
Abstract
KEY POINTS Extracellular spikes recorded in the visual cortex (Area 17/18, V1) are commonly classified into either regular-spiking (RS) or fast-spiking (FS). Using multi-electrode arrays positioned in cat V1 and a broadband stimulus, we show that there is also a distinct class with positive-spiking (PS) waveforms. PS units were associated mainly with non-oriented receptive fields while RS and FS units had orientation-selective receptive fields. We suggest that PS units are recordings of axons originating from the thalamus. This conclusion was reinforced by our finding that we could record PS units after cortical silencing, but not record RS and FS units. The importance of our findings is that we were able to correlate spike shapes with receptive field characteristics with high precision using multi-electrode extracellular recording techniques. This allows considerable increases in the amount of information that can be extracted from future cortical experiments. ABSTRACT Extracellular spike waveforms from recordings in the visual cortex have been classified into either regular-spiking (RS) or fast-spiking (FS) units. While both these types of spike waveforms are negative-dominant, we show that there are also distinct classes of spike waveforms in visual Area 17/18 (V1) of anaesthetised cats with positive-dominant waveforms, which are not regularly reported. The spatial receptive fields (RFs) of these different spike waveform types were estimated, which objectively revealed the existence of oriented and non-oriented RFs. We found that units with positive-dominant spikes, which have been associated with recordings from axons in the literature, had mostly non-oriented RFs (84%), which are similar to the centre-surround RFs observed in the dorsal lateral geniculate nucleus (dLGN). Thus, we hypothesise that these positive-dominant waveforms may be recordings from dLGN afferents. We recorded from V1 before and after the application of muscimol (a cortical silencer) and found that the positive-dominant spikes (PS) remained while the RS and FS cells did not. We also noted that the PS units had spiking characteristics normally associated with dLGN units (i.e. higher response spike rates, lower response latencies and higher proportion of burst spikes). Our findings show quantitatively that it is possible to correlate the RF properties of cortical neurons with particular spike waveforms. This has implications for how extracellular recordings should be interpreted and complex experiments can now be contemplated that would have been very challenging previously, such as assessing the feedforward connectivity between brain areas in the same location of cortical tissue.
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Affiliation(s)
- Shi H Sun
- National Vision Research Institute, Australian College of Optometry, Carlton, Victoria, 3053, Australia
| | - Ali Almasi
- National Vision Research Institute, Australian College of Optometry, Carlton, Victoria, 3053, Australia
| | - Molis Yunzab
- National Vision Research Institute, Australian College of Optometry, Carlton, Victoria, 3053, Australia
| | - Syeda Zehra
- Faculty of Science, Engineering and Technology, Swinburne University, Hawthorn, Victoria, 3122, Australia.,Department of Biomedical Engineering, University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Damien G Hicks
- Faculty of Science, Engineering and Technology, Swinburne University, Hawthorn, Victoria, 3122, Australia.,Optical Sciences Centre, Swinburne University, Hawthorn, Victoria, 3122, Australia
| | - Tatiana Kameneva
- Faculty of Science, Engineering and Technology, Swinburne University, Hawthorn, Victoria, 3122, Australia.,Department of Biomedical Engineering, University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Michael R Ibbotson
- National Vision Research Institute, Australian College of Optometry, Carlton, Victoria, 3053, Australia.,Department of Optometry and Vision Sciences, University of Melbourne, Parkville, Victoria, 3010, Australia
| | - Hamish Meffin
- National Vision Research Institute, Australian College of Optometry, Carlton, Victoria, 3053, Australia.,Department of Biomedical Engineering, University of Melbourne, Parkville, Victoria, 3010, Australia
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31
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Han C, Wang T, Wu Y, Li Y, Yang Y, Li L, Wang Y, Xing D. The Generation and Modulation of Distinct Gamma Oscillations with Local, Horizontal, and Feedback Connections in the Primary Visual Cortex: A Model Study on Large-Scale Networks. Neural Plast 2021; 2021:8874516. [PMID: 33531893 PMCID: PMC7834828 DOI: 10.1155/2021/8874516] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Revised: 10/25/2020] [Accepted: 11/12/2020] [Indexed: 11/23/2022] Open
Abstract
Gamma oscillation (GAMMA) in the local field potential (LFP) is a synchronized activity commonly found in many brain regions, and it has been thought as a functional signature of network connectivity in the brain, which plays important roles in information processing. Studies have shown that the response property of GAMMA is related to neural interaction through local recurrent connections (RC), feed-forward (FF), and feedback (FB) connections. However, the relationship between GAMMA and long-range horizontal connections (HC) in the brain remains unclear. Here, we aimed to understand this question in a large-scale network model for the primary visual cortex (V1). We created a computational model composed of multiple excitatory and inhibitory units with biologically plausible connectivity patterns for RC, FF, FB, and HC in V1; then, we quantitated GAMMA in network models at different strength levels of HC and other connection types. Surprisingly, we found that HC and FB, the two types of large-scale connections, play very different roles in generating and modulating GAMMA. While both FB and HC modulate a fast gamma oscillation (around 50-60 Hz) generated by FF and RC, HC generates a new GAMMA oscillating around 30 Hz, whose power and peak frequency can also be modulated by FB. Furthermore, response properties of the two GAMMAs in a network with both HC and FB are different in a way that is highly consistent with a recent experimental finding for distinct GAMMAs in macaque V1. The results suggest that distinct GAMMAs are signatures for neural connections in different spatial scales and they might be related to different functions for information integration. Our study, for the first time, pinpoints the underlying circuits for distinct GAMMAs in a mechanistic model for macaque V1, which might provide a new framework to study multiple gamma oscillations in other cortical regions.
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Affiliation(s)
- Chuanliang Han
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Tian Wang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Yujie Wu
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Yang Li
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Yi Yang
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
| | - Liang Li
- Beijing Institute of Basic Medical Sciences, Beijing 100850, China
| | - Yizheng Wang
- Beijing Institute of Basic Medical Sciences, Beijing 100850, China
| | - Dajun Xing
- State Key Laboratory of Cognitive Neuroscience and Learning & IDG/McGovern Institute for Brain Research, Beijing Normal University, Beijing 100875, China
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32
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Bitzenhofer SH, Pöpplau JA, Hanganu-Opatz I. Gamma activity accelerates during prefrontal development. eLife 2020; 9:e56795. [PMID: 33206597 PMCID: PMC7673781 DOI: 10.7554/elife.56795] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Accepted: 11/06/2020] [Indexed: 12/18/2022] Open
Abstract
Gamma oscillations are a prominent activity pattern in the cerebral cortex. While gamma rhythms have been extensively studied in the adult prefrontal cortex in the context of cognitive (dys)functions, little is known about their development. We addressed this issue by using extracellular recordings and optogenetic stimulations in mice across postnatal development. We show that fast rhythmic activity in the prefrontal cortex becomes prominent during the second postnatal week. While initially at about 15 Hz, fast oscillatory activity progressively accelerates with age and stabilizes within gamma frequency range (30-80 Hz) during the fourth postnatal week. Activation of layer 2/3 pyramidal neurons drives fast oscillations throughout development, yet the acceleration of their frequency follows similar temporal dynamics as the maturation of fast-spiking interneurons. These findings uncover the development of prefrontal gamma activity and provide a framework to examine the origin of abnormal gamma activity in neurodevelopmental disorders.
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Affiliation(s)
- Sebastian H Bitzenhofer
- Institute of Developmental Neurophysiology, Center for Molecular Neurobiology, University Medical Center Hamburg-EppendorfHamburgGermany
| | - Jastyn A Pöpplau
- Institute of Developmental Neurophysiology, Center for Molecular Neurobiology, University Medical Center Hamburg-EppendorfHamburgGermany
| | - Ileana Hanganu-Opatz
- Institute of Developmental Neurophysiology, Center for Molecular Neurobiology, University Medical Center Hamburg-EppendorfHamburgGermany
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