1
|
Ouyang W, Sun H, Wang Y. Unlocking the small RNAs: local and systemic modulators for advancing agronomic enhancement. J Genet Genomics 2024:S1673-8527(24)00364-3. [PMID: 39716571 DOI: 10.1016/j.jgg.2024.12.011] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2024] [Revised: 12/17/2024] [Accepted: 12/17/2024] [Indexed: 12/25/2024]
Abstract
Small regulatory RNAs (sRNAs) are essential regulators of gene expression across a wide range of organisms to precisely modulate gene activity based on sequence-specific recognition. In model plants like Arabidopsis thaliana, extensive research has primarily concentrated on 21 to 24-nucleotide (nt) sRNAs, particularly microRNAs (miRNAs). Recent advancements in cell and tissue isolation techniques, coupled with advanced sequencing technologies, are revealing a diverse array of preciously uncharacterized sRNA species. These include previously novel structural RNA fragments as well as numerous cell- and tissue-specific sRNAs that are active during distinct developmental stages, thereby enhancing our understanding of the precise and dynamic regulatory roles of sRNAs in plant development regulation. Additionally, a notable feature of sRNAs is their capacity for amplification and movement between cells and tissues, which facilitates long-distance communication-an adaptation critical to plants due to their sessile nature. In this review, we will discuss the classification and mechanisms of action of sRNAs, using legumes as a primary example due to their essential engagement for the unique organ establishment of root nodules and long-distance signaling, and further illustrating the potential applications of sRNAs in modern agricultural breeding and environmentally sustainable plant protection strategies.
Collapse
Affiliation(s)
- Wenqi Ouyang
- Key Laboratory of Seed Innovation, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; College of Tropical Crops, Hainan University, Haikou, Hainan 570288, China
| | - Hongda Sun
- Key Laboratory of Seed Innovation, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; University of Chinese Academy of Sciences, Beijing, China
| | - Yuan Wang
- Key Laboratory of Seed Innovation, Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China; CAS-JIC Centre of Excellence for Plant and Microbial Science (CEPAMS), Institute of Genetics and Developmental Biology, CAS, Beijing 100101, China.
| |
Collapse
|
2
|
Ayyoub A, Yu X, Zhang X, Gao C, Li J, Yin S, Chen S, Liesche J. Drought-dependent regulation of cell coupling in Arabidopsis leaf epidermis requires plasmodesmal protein NHL12. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:7019-7030. [PMID: 39240133 PMCID: PMC11630015 DOI: 10.1093/jxb/erae370] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2024] [Accepted: 09/13/2024] [Indexed: 09/07/2024]
Abstract
The cytoplasm of most plant cells is connected by membrane-lined cell wall channels, the plasmodesmata (PD). Dynamic regulation of sugar, hormone, and protein diffusion through PD is essential for plant development and stress responses. Understanding this regulation requires knowledge of factors and mechanisms that control PD permeability through the modulation of callose levels in the cell wall around PD openings. We investigated PD regulation in leaf epidermal cells in relation to drought stress in Arabidopsis. PD-mediated cell wall permeability was decreased by drought stress and the hormone abscisic acid (ABA), and we tested how this related to several PD-associated genes with drought-responsive expression. Mutants of NON-RACE SPECIFIC DISEASE RESISTANCE/HIN1 HAIRPIN-INDUCED-LIKE 12 (NHL12) showed relatively low PD permeability that was unaffected by drought or ABA treatment. Overexpression of NHL12 in Nicotiana benthamiana epidermal cells increased PD permeability. Moreover, we showed that NHL12 can potentially interact with the callose synthase regulator NHL3 and we explored the effect of NHL12 abundance and/or lower interface permeability on ABA signaling genes. Our results indicate that NHL12 is a drought-responsive negative regulator of PD callose levels and, thereby, interface permeability. Results are discussed in relation to PD function during drought stress and the regulation of intercellular transport.
Collapse
Affiliation(s)
- Anam Ayyoub
- College of Life Sciences, Northwest A&F University, 712100 Yangling, China
- Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, 712100 Yangling, China
| | - Xiuyuan Yu
- College of Life Sciences, Northwest A&F University, 712100 Yangling, China
| | - Xingjian Zhang
- Institute of Biology, University of Graz, 8010 Graz, Austria
| | - Chen Gao
- Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg, Denmark
| | - Jiazhou Li
- College of Life Sciences, Northwest A&F University, 712100 Yangling, China
- Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, 712100 Yangling, China
| | - Shijiao Yin
- College of Life Sciences, Northwest A&F University, 712100 Yangling, China
- Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, 712100 Yangling, China
| | - Shaolin Chen
- College of Life Sciences, Northwest A&F University, 712100 Yangling, China
- Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, 712100 Yangling, China
| | - Johannes Liesche
- College of Life Sciences, Northwest A&F University, 712100 Yangling, China
- Biomass Energy Center for Arid and Semiarid Lands, Northwest A&F University, 712100 Yangling, China
- Institute of Biology, University of Graz, 8010 Graz, Austria
| |
Collapse
|
3
|
Hong C, Lee HG, Shim S, Park OS, Kim JH, Lee K, Oh E, Kim J, Jung YJ, Seo PJ. Histone modification-dependent production of peptide hormones facilitates acquisition of pluripotency during leaf-to-callus transition in Arabidopsis. THE NEW PHYTOLOGIST 2024; 242:1068-1083. [PMID: 38406998 DOI: 10.1111/nph.19637] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Accepted: 01/07/2024] [Indexed: 02/27/2024]
Abstract
Chromatin configuration is critical for establishing tissue identity and changes substantially during tissue identity transitions. The crucial scientific and agricultural technology of in vitro tissue culture exploits callus formation from diverse tissue explants and tissue regeneration via de novo organogenesis. We investigated the dynamic changes in H3ac and H3K4me3 histone modifications during leaf-to-callus transition in Arabidopsis thaliana. We analyzed changes in the global distribution of H3ac and H3K4me3 during the leaf-to-callus transition, focusing on transcriptionally active regions in calli relative to leaf explants, defined by increased accumulation of both H3ac and H3K4me3. Peptide signaling was particularly activated during callus formation; the peptide hormones RGF3, RGF8, PIP1 and PIPL3 were upregulated, promoting callus proliferation and conferring competence for de novo shoot organogenesis. The corresponding peptide receptors were also implicated in peptide-regulated callus proliferation and regeneration capacity. The effect of peptide hormones in plant regeneration is likely at least partly conserved in crop plants. Our results indicate that chromatin-dependent regulation of peptide hormone production not only stimulates callus proliferation but also establishes pluripotency, improving the overall efficiency of two-step regeneration in plant systems.
Collapse
Affiliation(s)
- Cheljong Hong
- Department of Chemistry, Seoul National University, Seoul, 08826, Korea
| | - Hong Gil Lee
- Department of Chemistry, Seoul National University, Seoul, 08826, Korea
- Research Institute of Basic Science, Seoul National University, Seoul, 08826, Korea
| | - Sangrea Shim
- Department of Forest Resources, College of Forest and Environmental Sciences, Kangwon National University, Chuncheon, 24341, Korea
| | - Ok-Sun Park
- Research Institute of Basic Science, Seoul National University, Seoul, 08826, Korea
| | - Jong Hee Kim
- Division of Horticultural Biotechnology, School of Biotechnology, Hankyong National University, Anseong, 17579, Korea
| | - Kyounghee Lee
- Research Institute of Basic Science, Seoul National University, Seoul, 08826, Korea
| | - Eunkyoo Oh
- Department of Life Sciences, Korea University, Seoul, 08826, Korea
| | - Jungmook Kim
- Department of Bioenergy Science and Technology, Chonnam National University, Gwangju, 61186, Korea
- Department of Integrative Food, Bioscience and Biotechnology, Chonnam National University, Gwangju, 61186, Korea
| | - Yu Jin Jung
- Division of Horticultural Biotechnology, School of Biotechnology, Hankyong National University, Anseong, 17579, Korea
- Institute of Genetic Engineering, Hankyong National University, Anseong, 17579, Korea
| | - Pil Joon Seo
- Department of Chemistry, Seoul National University, Seoul, 08826, Korea
- Research Institute of Basic Science, Seoul National University, Seoul, 08826, Korea
- Plant Genomics and Breeding Institute, Seoul National University, Seoul, 08826, Korea
| |
Collapse
|
4
|
Yang Z, Cheng G, Yu Q, Jiao W, Zeng K, Luo T, Zhang H, Shang H, Huang G, Wang F, Guo Y, Xu J. Identification and characterization of the Remorin gene family in Saccharum and the involvement of ScREM1.5e-1/-2 in SCMV infection on sugarcane. FRONTIERS IN PLANT SCIENCE 2024; 15:1365995. [PMID: 38463560 PMCID: PMC10920289 DOI: 10.3389/fpls.2024.1365995] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/05/2024] [Accepted: 02/08/2024] [Indexed: 03/12/2024]
Abstract
Introduction Remorins (REMs) are plant-specific membrane-associated proteins that play important roles in plant-pathogen interactions and environmental adaptations. Group I REMs are extensively involved in virus infection. However, little is known about the REM gene family in sugarcane (Saccharum spp. hyrid), the most important sugar and energy crop around world. Methods Comparative genomics were employed to analyze the REM gene family in Saccharum spontaneum. Transcriptomics or RT-qPCR were used to analyze their expression files in different development stages or tissues under different treatments. Yeast two hybrid, bimolecular fluorescence complementation and co-immunoprecipitation assays were applied to investigate the protein interaction. Results In this study, 65 REMs were identified from Saccharum spontaneum genome and classified into six groups based on phylogenetic tree analysis. These REMs contain multiple cis-elements associated with growth, development, hormone and stress response. Expression profiling revealed that among different SsREMs with variable expression levels in different developmental stages or different tissues. A pair of alleles, ScREM1.5e-1/-2, were isolated from the sugarcane cultivar ROC22. ScREM1.5e-1/-2 were highly expressed in leaves, with the former expressed at significantly higher levels than the latter. Their expression was induced by treatment with H2O2, ABA, ethylene, brassinosteroid, SA or MeJA, and varied upon Sugarcane mosaic virus (SCMV) infection. ScREM1.5e-1 was localized to the plasma membrane (PM), while ScREM1.5e-2 was localized to the cytoplasm or nucleus. ScREM1.5e-1/-2 can self-interact and interact with each other, and interact with VPgs from SCMV, Sorghum mosaic virus, or Sugarcane streak mosaic virus. The interactions with VPgs relocated ScREM1.5e-1 from the PM to the cytoplasm. Discussion These results reveal the origin, distribution and evolution of the REM gene family in sugarcane and may shed light on engineering sugarcane resistance against sugarcane mosaic pathogens.
Collapse
Affiliation(s)
- Zongtao Yang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Guangyuan Cheng
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Quanxin Yu
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Wendi Jiao
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Kang Zeng
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Tingxu Luo
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Hai Zhang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Heyang Shang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Guoqiang Huang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| | - Fengji Wang
- Key Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, College of Crop Science, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Ying Guo
- Fujian Key Laboratory of Subtropical Plant Physiology and Biochemistry, Fujian Institute of Subtropical Botany, Xiamen, Fujian, China
| | - Jingsheng Xu
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture and Rural Affairs, National Engineering Research Center for Sugarcane, College of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, Fujian, China
| |
Collapse
|
5
|
Liu Z, Cheng J. C 4 rice engineering, beyond installing a C 4 cycle. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 206:108256. [PMID: 38091938 DOI: 10.1016/j.plaphy.2023.108256] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Revised: 11/28/2023] [Accepted: 11/30/2023] [Indexed: 02/15/2024]
Abstract
C4 photosynthesis in higher plants is carried out by two distinct cell types: mesophyll cells and bundle sheath cells, as a result highly concentrated carbon dioxide is released surrounding RuBisCo in chloroplasts of bundle sheath cells and the photosynthetic efficiency is significantly higher than that of C3 plants. The evolution of the dual-cell C4 cycle involved complex modifications to leaf anatomy and cell ultra-structures. These include an increase in leaf venation, the formation of Kranz anatomy, changes in chloroplast morphology in bundle sheath cells, and increases in the density of plasmodesmata at interfaces between the bundle sheath and mesophyll cells. It is predicted that cereals will be in severe worldwide shortage at the mid-term of this century. Rice is a staple food that feeds more than half of the world's population. If rice can be engineered to perform C4 photosynthesis, it is estimated that rice yield will be increased by at least 50% due to enhanced photosynthesis. Thus, the Second Green Revolution has been launched on this principle by genetically installing C4 photosynthesis into C3 crops. The studies on molecular mechanisms underlying the changes in leaf morphoanatomy involved in C4 photosynthesis have made great progress in recent years. As there are plenty of reviews discussing the installment of the C4 cycle, we focus on the current progress and challenges posed to the research regarding leaf anatomy and cell ultra-structure modifications made towards the development of C4 rice.
Collapse
Affiliation(s)
- Zheng Liu
- State Key Laboratory of North China Crop Improvement and Regulation, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China.
| | - Jinjin Cheng
- College of Agronomy, Shanxi Agricultural University, Jinzhong, 030801, China
| |
Collapse
|
6
|
Cui Y, He M, Liu D, Liu J, Liu J, Yan D. Intercellular Communication during Stomatal Development with a Focus on the Role of Symplastic Connection. Int J Mol Sci 2023; 24:ijms24032593. [PMID: 36768915 PMCID: PMC9917297 DOI: 10.3390/ijms24032593] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2022] [Revised: 01/13/2023] [Accepted: 01/23/2023] [Indexed: 01/31/2023] Open
Abstract
Stomata are microscopic pores on the plant epidermis that serve as a major passage for the gas and water exchange between a plant and the atmosphere. The formation of stomata requires a series of cell division and cell-fate transitions and some key regulators including transcription factors and peptides. Monocots have different stomatal patterning and a specific subsidiary cell formation process compared with dicots. Cell-to-cell symplastic trafficking mediated by plasmodesmata (PD) allows molecules including proteins, RNAs and hormones to function in neighboring cells by moving through the channels. During stomatal developmental process, the intercellular communication between stomata complex and adjacent epidermal cells are finely controlled at different stages. Thus, the stomata cells are isolated or connected with others to facilitate their formation or movement. In the review, we summarize the main regulation mechanism underlying stomata development in both dicots and monocots and especially the specific regulation of subsidiary cell formation in monocots. We aim to highlight the important role of symplastic connection modulation during stomata development, including the status of PD presence at different cell-cell interfaces and the function of relevant mobile factors in both dicots and monocots.
Collapse
Affiliation(s)
- Yongqi Cui
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475001, China
| | - Meiqing He
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475001, China
| | - Datong Liu
- Key Laboratory of Wheat Biology and Genetic Improvement for Low & Middle Yangtze Valley, Ministry of Agriculture and Rural Affairs/Lixiahe Institute of Agricultural Sciences of Jiangsu, Yangzhou 225007, China
| | - Jinxin Liu
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475001, China
| | - Jie Liu
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475001, China
| | - Dawei Yan
- State Key Laboratory of Crop Stress Adaptation and Improvement, School of Life Sciences, Henan University, Kaifeng 475001, China
- Academy for Advanced Interdisciplinary Studies, Henan University, Kaifeng 475001, China
- Correspondence:
| |
Collapse
|
7
|
Christensen JR, Reck-Peterson SL. Hitchhiking Across Kingdoms: Cotransport of Cargos in Fungal, Animal, and Plant Cells. Annu Rev Cell Dev Biol 2022; 38:155-178. [PMID: 35905769 PMCID: PMC10967659 DOI: 10.1146/annurev-cellbio-120420-104341] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Eukaryotic cells across the tree of life organize their subcellular components via intracellular transport mechanisms. In canonical transport, myosin, kinesin, and dynein motor proteins interact with cargos via adaptor proteins and move along filamentous actin or microtubule tracks. In contrast to this canonical mode, hitchhiking is a newly discovered mode of intracellular transport in which a cargo attaches itself to an already-motile cargo rather than directly associating with a motor protein itself. Many cargos including messenger RNAs, protein complexes, and organelles hitchhike on membrane-bound cargos. Hitchhiking-like behaviors have been shown to impact cellular processes including local protein translation, long-distance signaling, and organelle network reorganization. Here, we review instances of cargo hitchhiking in fungal, animal, and plant cells and discuss the potential cellular and evolutionary importance of hitchhiking in these different contexts.
Collapse
Affiliation(s)
- Jenna R Christensen
- Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California, USA; ,
| | - Samara L Reck-Peterson
- Department of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, California, USA; ,
- Department of Biological Sciences, Cell and Developmental Biology Section, University of California, San Diego, La Jolla, California, USA
- Howard Hughes Medical Institute, Chevy Chase, Maryland, USA
| |
Collapse
|
8
|
Sphingolipids at Plasmodesmata: Structural Components and Functional Modulators. Int J Mol Sci 2022; 23:ijms23105677. [PMID: 35628487 PMCID: PMC9145688 DOI: 10.3390/ijms23105677] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Revised: 05/16/2022] [Accepted: 05/17/2022] [Indexed: 11/16/2022] Open
Abstract
Plasmodesmata (PD) are plant-specific channels connecting adjacent cells to mediate intercellular communication of molecules essential for plant development and defense. The typical PD are organized by the close apposition of the plasma membrane (PM), the desmotubule derived from the endoplasmic reticulum (ER), and spoke-like elements linking the two membranes. The plasmodesmal PM (PD-PM) is characterized by the formation of unique microdomains enriched with sphingolipids, sterols, and specific proteins, identified by lipidomics and proteomics. These components modulate PD to adapt to the dynamic changes of developmental processes and environmental stimuli. In this review, we focus on highlighting the functions of sphingolipid species in plasmodesmata, including membrane microdomain organization, architecture transformation, callose deposition and permeability control, and signaling regulation. We also briefly discuss the difference between sphingolipids and sterols, and we propose potential unresolved questions that are of help for further understanding the correspondence between plasmodesmal structure and function.
Collapse
|
9
|
Accelerated remodeling of the mesophyll-bundle sheath interface in the maize C4 cycle mutant leaves. Sci Rep 2022; 12:5057. [PMID: 35322159 PMCID: PMC8943126 DOI: 10.1038/s41598-022-09135-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2021] [Accepted: 03/14/2022] [Indexed: 11/18/2022] Open
Abstract
C4 photosynthesis in the maize leaf involves the exchange of organic acids between mesophyll (M) and the bundle sheath (BS) cells. The transport is mediated by plasmodesmata embedded in the suberized cell wall. We examined the maize Kranz anatomy with a focus on the plasmodesmata and cell wall suberization with microscopy methods. In the young leaf zone where M and BS cells had indistinguishable proplastids, plasmodesmata were simple and no suberin was detected. In leaf zones where dimorphic chloroplasts were evident, the plasmodesma acquired sphincter and cytoplasmic sleeves, and suberin was discerned. These modifications were accompanied by a drop in symplastic dye mobility at the M-BS boundary. We compared the kinetics of chloroplast differentiation and the modifications in M-BS connectivity in ppdk and dct2 mutants where C4 cycle is affected. The rate of chloroplast diversification did not alter, but plasmodesma remodeling, symplastic transport inhibition, and cell wall suberization were observed from younger leaf zone in the mutants than in wild type. Our results indicate that inactivation of the C4 genes accelerated the changes in the M-BS interface, and the reduced permeability suggests that symplastic transport between M and BS could be regulated for normal operation of C4 cycle.
Collapse
|
10
|
Miras M, Pottier M, Schladt TM, Ejike JO, Redzich L, Frommer WB, Kim JY. Plasmodesmata and their role in assimilate translocation. JOURNAL OF PLANT PHYSIOLOGY 2022; 270:153633. [PMID: 35151953 DOI: 10.1016/j.jplph.2022.153633] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Revised: 01/26/2022] [Accepted: 01/26/2022] [Indexed: 06/14/2023]
Abstract
During multicellularization, plants evolved unique cell-cell connections, the plasmodesmata (PD). PD of angiosperms are complex cellular domains, embedded in the cell wall and consisting of multiple membranes and a large number of proteins. From the beginning, it had been assumed that PD provide passage for a wide range of molecules, from ions to metabolites and hormones, to RNAs and even proteins. In the context of assimilate allocation, it has been hypothesized that sucrose produced in mesophyll cells is transported via PD from cell to cell down a concentration gradient towards the phloem. Entry into the sieve element companion cell complex (SECCC) is then mediated on three potential routes, depending on the species and conditions, - either via diffusion across PD, after conversion to raffinose via PD using a polymer trap mechanism, or via a set of transporters which secrete sucrose from one cell and secondary active uptake into the SECCC. Multiple loading mechanisms can likely coexist. We here review the current knowledge regarding photoassimilate transport across PD between cells as a prerequisite for translocation from leaves to recipient organs, in particular roots and developing seeds. We summarize the state-of-the-art in protein composition, structure, transport mechanism and regulation of PD to apprehend their functions in carbohydrate allocation. Since many aspects of PD biology remain elusive, we highlight areas that require new approaches and technologies to advance our understanding of these enigmatic and important cell-cell connections.
Collapse
Affiliation(s)
- Manuel Miras
- Institute for Molecular Physiology, Heinrich-Heine-University Düsseldorf, Düsseldorf, 40225, Germany
| | - Mathieu Pottier
- Institute for Molecular Physiology, Heinrich-Heine-University Düsseldorf, Düsseldorf, 40225, Germany
| | - T Moritz Schladt
- Institute for Molecular Physiology, Heinrich-Heine-University Düsseldorf, Düsseldorf, 40225, Germany
| | - J Obinna Ejike
- Institute for Molecular Physiology and Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich-Heine-University Düsseldorf, Düsseldorf, 40225, Germany
| | - Laura Redzich
- Institute for Molecular Physiology and Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich-Heine-University Düsseldorf, Düsseldorf, 40225, Germany
| | - Wolf B Frommer
- Institute for Molecular Physiology and Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich-Heine-University Düsseldorf, Düsseldorf, 40225, Germany; Institute of Transformative Bio-Molecules (WPI-ITbM), Nagoya University, Chikusa, Nagoya, 464-8601, Japan.
| | - Ji-Yun Kim
- Institute for Molecular Physiology and Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich-Heine-University Düsseldorf, Düsseldorf, 40225, Germany
| |
Collapse
|
11
|
Godel-J Drychowska K, Kurczy Ska E. Qualitative and quantitative analyses of the plasmodesmata that accompany cell fate changes during the somatic embryogenesis of Arabidopsis thaliana. FUNCTIONAL PLANT BIOLOGY : FPB 2022; 49:186-200. [PMID: 34838155 DOI: 10.1071/fp21243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2021] [Accepted: 11/10/2021] [Indexed: 06/13/2023]
Abstract
Plasmodesmata (PD) are cytoplasmic and membrane-lined microchannels that enable symplasmic communication in plants, which is involved in the regulation of cell differentiation. The presented results emphasise the qualitative and quantitative analyses of PD, which are the basis of the symplasmic communication. The cells that initiate various development programmes create symplasmic domains that are characterised by different degrees of symplasmic communication. Changes in symplasmic communication are caused by the presence or absence of PD and/or the ability of signals to move through them. In the presented studies, somatic embryogenesis was used to describe the characteristics of the PD within and between the symplasmic domains in explants of the Arabidopsis thaliana (L.) Heynh ecotype Columbia-0 and 35S:BBM transgenic line. Transmission electron microscopy was used to describe the cells that regain totipotency/pluripotency during somatic embryogenesis, as well as the number and shape of the PD in the different symplasmic domains of the explants and somatic embryos. Array tomography was used to create a 3D reconstruction of the protodermal cells of the somatic embryos with particular emphasis on the PD distribution in the cell walls. The results showed that there were different frequencies of the PD within and between the symplasmic domain that emerges during somatic embryogenesis and between the Col-0 and 35S:BBM somatic embryos with regard to the differences in the shape of the PD.
Collapse
Affiliation(s)
- Kamila Godel-J Drychowska
- Faculty of Natural Sciences, Institute of Biology, Biotechnology and Environmental Protection, The University of Silesia, 28 Jagiellonska Street, 40-032 Katowice, Poland
| | - Ewa Kurczy Ska
- Faculty of Natural Sciences, Institute of Biology, Biotechnology and Environmental Protection, The University of Silesia, 28 Jagiellonska Street, 40-032 Katowice, Poland
| |
Collapse
|
12
|
Abstract
In plants, plasmodesmata (PD) are plasmamembrane-lined pores that traverse the cell wall to establish cytoplasmic and endomembrane continuity between neighboring cells. As intercellular channels, PD play pivotal roles in plant growth and development, defense responses, and are also co-opted by viruses to spread cell-to-cell to establish systemic infection. Proteomic analyses of PD-enriched fractions may provide critical insights on plasmodesmal biology and PD-mediated virus-host interactions. However, it is difficult to isolate PD from plant tissues as they are firmly embedded in the cell wall. Here, we describe a protocol for the purification of PD from Nicotiana benthamiana leaves for proteomic analysis.
Collapse
Affiliation(s)
- Rongrong He
- London Research and Development Centre, Agriculture and Agri-Food Canada, London, ON, Canada
- Department of Biology, The University of Western Ontario, London, ON, Canada
| | - Mark A Bernards
- Department of Biology, The University of Western Ontario, London, ON, Canada
| | - Aiming Wang
- London Research and Development Centre, Agriculture and Agri-Food Canada, London, ON, Canada.
| |
Collapse
|
13
|
Paniagua C, Sinanaj B, Benitez-Alfonso Y. Plasmodesmata and their role in the regulation of phloem unloading during fruit development. CURRENT OPINION IN PLANT BIOLOGY 2021; 64:102145. [PMID: 34826657 PMCID: PMC8687135 DOI: 10.1016/j.pbi.2021.102145] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2021] [Revised: 10/19/2021] [Accepted: 10/21/2021] [Indexed: 05/08/2023]
Abstract
Fruit consumption is fundamental to a balanced diet. The contemporary challenge of maintaining a steady food supply to meet the demands of a growing population is driving the development of strategies to improve the production and nutritional quality of fruit. Plasmodesmata, the structures that mediate symplasmic transport between plant cells, play an important role in phloem unloading and distribution of sugars and signalling molecules into developing organs. Targeted modifications to the structures and functioning of plasmodesmata have the potential to improve fruit development; however, knowledge on the mechanisms underpinning plasmodesmata regulation in this context is scarce. In this review, we have compiled current knowledge on plasmodesmata and their structural characterisation during the development of fruit organs. We discuss key questions on phloem unloading, including the pathway shift from symplasmic to apoplastic that takes place during the onset of ripening as potential targets for improving fruit quality.
Collapse
Affiliation(s)
- Candelas Paniagua
- Centre for Plant Sciences, School of Biology, University of Leeds, Leeds, LS2 9JT, UK
| | - Besiana Sinanaj
- Centre for Plant Sciences, School of Biology, University of Leeds, Leeds, LS2 9JT, UK
| | | |
Collapse
|
14
|
Gao X, Yuan Y, Liu Z, Liu C, Xin H, Zhang Y, Gai S. Chilling and gibberellin acids hyperinduce β-1,3-glucanases to reopen transport corridor and break endodormancy in tree peony (Paeonia suffruticosa). PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 167:771-784. [PMID: 34530322 DOI: 10.1016/j.plaphy.2021.09.002] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2021] [Revised: 09/01/2021] [Accepted: 09/02/2021] [Indexed: 05/21/2023]
Abstract
Bud endodormancy is accompanied by transport channel apertures blockage through callose deposition, and its resume to growth requires evoking β-1,3-glucanases (BGs) to unchoke the conduit. To understand out its working manner, the statuses of the transport channels were evaluated and candidate BGs were identified during chilling and gibberellin acids (GA) induced dormancy release in tree peony. Calcein reflects plasmodesmata permeability, and no calcein was observed in the bud together with density aniline blue fluorescent around the stem phloem at 0 d chilling. With the increase of chilling accumulation, the contents of glucan declined and the activities of gulcanase increased gradually in buds, and the calcein reached the top of flower primordia at 21 d chilled bud. Both GA3 and GA4 feedings promoted bud sprouting and growth along with rapidly unchoking the transport channels, and GA3 was more effective. Several candidate β-1,3-glucanase genes were detected, combining transcriptional profiling and quantitative PCR analysis. PsBG1, PsBG3, PsBG6, PsBG8 and PsBG9 were inducible by chilling accumulation and presented laminarin hydrolyzing activities after prokaryotically expression, while PsBG1, PsBG3, PsBG8 and PsBG9 responded to GAs application. Subcellular localizations revealed that PsBG6 and PsBG9 were plasmodesmata residents. It was concluded that PsBG6 played a vital role in chilling accumulation response and PsBG9 was central in GAs-induced dormancy release, and they could be used as marker genes for dormancy release in tree peony. These results were of great value to understand the mechanism of dormancy regulation and as an important fundamental for forcing culture technology in tree peony.
Collapse
Affiliation(s)
- Xuekai Gao
- College of Life Sciences, Qingdao Agricultural University, Qingdao, 266109, China; University Key Laboratory of Plant Biotechnology in Shandong Province, Qingdao, 266109, China.
| | - Yanchao Yuan
- College of Life Sciences, Qingdao Agricultural University, Qingdao, 266109, China; University Key Laboratory of Plant Biotechnology in Shandong Province, Qingdao, 266109, China.
| | - Ziqi Liu
- College of Life Sciences, Qingdao Agricultural University, Qingdao, 266109, China; University Key Laboratory of Plant Biotechnology in Shandong Province, Qingdao, 266109, China.
| | - Chunying Liu
- College of Life Sciences, Qingdao Agricultural University, Qingdao, 266109, China; University Key Laboratory of Plant Biotechnology in Shandong Province, Qingdao, 266109, China.
| | - Hua Xin
- College of Life Sciences, Qingdao Agricultural University, Qingdao, 266109, China; University Key Laboratory of Plant Biotechnology in Shandong Province, Qingdao, 266109, China.
| | - Yuxi Zhang
- College of Life Sciences, Qingdao Agricultural University, Qingdao, 266109, China; University Key Laboratory of Plant Biotechnology in Shandong Province, Qingdao, 266109, China.
| | - Shupeng Gai
- College of Life Sciences, Qingdao Agricultural University, Qingdao, 266109, China; University Key Laboratory of Plant Biotechnology in Shandong Province, Qingdao, 266109, China.
| |
Collapse
|
15
|
Godel-Jędrychowska K, Kulińska-Łukaszek K, Kurczyńska E. Similarities and Differences in the GFP Movement in the Zygotic and Somatic Embryos of Arabidopsis. FRONTIERS IN PLANT SCIENCE 2021; 12:649806. [PMID: 34122474 PMCID: PMC8194063 DOI: 10.3389/fpls.2021.649806] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/05/2021] [Accepted: 05/03/2021] [Indexed: 06/12/2023]
Abstract
Intercellular signaling during embryo patterning is not well understood and the role of symplasmic communication has been poorly considered. The correlation between the symplasmic domains and the development of the embryo organs/tissues during zygotic embryogenesis has only been described for a few examples, including Arabidopsis. How this process occurs during the development of somatic embryos (SEs) is still unknown. The aim of these studies was to answer the question: do SEs have a restriction in symplasmic transport depending on the developmental stage that is similar to their zygotic counterparts? The studies included an analysis of the GFP distribution pattern as expressed under diverse promoters in zygotic embryos (ZEs) and SEs. The results of the GFP distribution in the ZEs and SEs showed that 1/the symplasmic domains between the embryo organs and tissues in the SEs was similar to those in the ZEs and 2/the restriction in symplasmic transport in the SEs was correlated with the developmental stage and was similar to the one in their zygotic counterparts, however, with the spatio-temporal differences and different PDs SEL value between these two types of embryos.
Collapse
|
16
|
Chen C, Vanneste S, Chen X. Review: Membrane tethers control plasmodesmal function and formation. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2021; 304:110800. [PMID: 33568299 DOI: 10.1016/j.plantsci.2020.110800] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2020] [Revised: 12/07/2020] [Accepted: 12/11/2020] [Indexed: 06/12/2023]
Abstract
Cell-to-cell communication is crucial in coordinating diverse biological processes in multicellular organisms. In plants, communication between adjacent cells occurs via nanotubular passages called plasmodesmata (PD). The PD passage is composed of an appressed endoplasmic reticulum (ER) internally, and plasma membrane (PM) externally, that traverses the cell wall, and associates with the actin-cytoskeleton. The coordination of the ER, PM and cytoskeleton plays a potential role in maintaining the architecture and conductivity of PD. Many data suggest that PD-associated proteins can serve as tethers that connect these structures in a functional PD, to regulate cell-to-cell communication. In this review, we summarize the organization and regulation of PD activity via tethering proteins, and discuss the importance of PD-mediated cell-to-cell communication in plant development and defense against environmental stress.
Collapse
Affiliation(s)
- Chaofan Chen
- College of Life Science and Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, China; FAFU-UCR Joint Center for Horticultural Biology and Metabolomics, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Steffen Vanneste
- Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium; Department of Plants and Crops, Ghent University, Coupure links 653, 9000 Ghent, Belgium; Lab of Plant Growth Analysis, Ghent University Global Campus, Songdomunhwa-Ro, 119, Yeonsu-gu, Incheon 21985, Republic of Korea
| | - Xu Chen
- FAFU-UCR Joint Center for Horticultural Biology and Metabolomics, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China.
| |
Collapse
|
17
|
Peters WS, Jensen KH, Stone HA, Knoblauch M. Plasmodesmata and the problems with size: Interpreting the confusion. JOURNAL OF PLANT PHYSIOLOGY 2021; 257:153341. [PMID: 33388666 DOI: 10.1016/j.jplph.2020.153341] [Citation(s) in RCA: 22] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Revised: 12/04/2020] [Accepted: 12/07/2020] [Indexed: 05/14/2023]
Abstract
Plant tissues exhibit a symplasmic organization; the individual protoplasts are connected to their neighbors via cytoplasmic bridges that extend through pores in the cell walls. These bridges may have diameters of a micrometer or more, as in the sieve pores of the phloem, but in most cell types they are smaller. Historically, botanists referred to cytoplasmic bridges of all sizes as plasmodesmata. The meaning of the term began to shift when the transmission electron microscope (TEM) became the preferred tool for studying these structures. Today, a plasmodesma is widely understood to be a 'nano-scale' pore. Unfortunately, our understanding of these nanoscopic channels suffers from methodological limitations. This is exemplified by the fact that state-of-the-art EM techniques appear to reveal plasmodesmal pore structures that are much smaller than the tracer molecules known to diffuse through these pores. In general, transport processes in pores that have dimensions in the size range of the transported molecules are governed by different physical parameters than transport process in the macroscopic realm. This can lead to unexpected effects, as experience in nanofluidic technologies demonstrates. Our discussion of problems of size in plasmodesma research leads us to conclude that the field will benefit from technomimetic reasoning - the utilization of concepts developed in applied nanofluidics for the interpretation of biological systems.
Collapse
Affiliation(s)
- Winfried S Peters
- School of Biological Sciences, Washington State University, Pullman, WA, 99164, USA; Department of Biology, Purdue University Fort Wayne, Fort Wayne, IN, 46805, USA.
| | - Kaare H Jensen
- Department of Physics, Technical University of Denmark, DK-2800 Kgs., Lyngby, Denmark.
| | - Howard A Stone
- Department of Mechanical and Aerospace Engineering, Princeton University, Princeton, NJ, 08544, USA.
| | - Michael Knoblauch
- School of Biological Sciences, Washington State University, Pullman, WA, 99164, USA.
| |
Collapse
|
18
|
Lazareva EA, Lezzhov AA, Chergintsev DA, Golyshev SA, Dolja VV, Morozov SY, Heinlein M, Solovyev AG. Reticulon-like properties of a plant virus-encoded movement protein. THE NEW PHYTOLOGIST 2021; 229:1052-1066. [PMID: 32866987 DOI: 10.1111/nph.16905] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Accepted: 08/20/2020] [Indexed: 06/11/2023]
Abstract
Plant viruses encode movement proteins (MPs) that ensure the transport of viral genomes through plasmodesmata (PD) and use cell endomembranes, mostly the endoplasmic reticulum (ER), for delivery of viral genomes to PD and formation of PD-anchored virus replication compartments. Here, we demonstrate that the Hibiscus green spot virus BMB2 MP, an integral ER protein, induces constrictions of ER tubules, decreases the mobility of ER luminal content, and exhibits an affinity to highly curved membranes. These properties are similar to those described for reticulons, cellular proteins that induce membrane curvature to shape the ER tubules. Similar to reticulons, BMB2 adopts a W-like topology within the ER membrane. BMB2 targets PD and increases their size exclusion limit, and these BMB2 activities correlate with the ability to induce constrictions of ER tubules. We propose that the induction of ER constrictions contributes to the BMB2-dependent increase in PD permeability and formation of the PD-associated replication compartments, therefore facilitating the virus intercellular spread. Furthermore, we show that the ER tubule constrictions also occur in cells expressing TGB2, one of the three MPs of Potato virus X (PVX), and in PVX-infected cells, suggesting that reticulon-like MPs are employed by diverse RNA viruses.
Collapse
Affiliation(s)
- Ekaterina A Lazareva
- Department of Virology, Biological Faculty, Moscow State University, Moscow, 119234, Russia
| | - Alexander A Lezzhov
- Faculty of Bioengineering and Bioinformatics, Moscow State University, Moscow, 119991, Russia
| | - Denis A Chergintsev
- Department of Plant Physiology, Biological Faculty, Moscow State University, Moscow, 119234, Russia
| | - Sergei A Golyshev
- A.N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119992, Russia
| | - Valerian V Dolja
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, 97331, USA
| | - Sergey Y Morozov
- Department of Virology, Biological Faculty, Moscow State University, Moscow, 119234, Russia
- A.N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119992, Russia
| | - Manfred Heinlein
- Institute for Plant Molecular Biology (IBMP-CNRS), University of Strasbourg, Strasbourg, 67000, France
| | - Andrey G Solovyev
- Department of Virology, Biological Faculty, Moscow State University, Moscow, 119234, Russia
- A.N. Belozersky Institute of Physico-Chemical Biology, Moscow State University, Moscow, 119992, Russia
- Institute of Molecular Medicine, Sechenov First Moscow State Medical University, Moscow, 119991, Russia
- Institute of Agricultural Biotechnology, Russian Academy of Agricultural Sciences, Moscow, 127550, Russia
| |
Collapse
|
19
|
Tian R, Paul P, Joshi S, Perry SE. Genetic activity during early plant embryogenesis. Biochem J 2020; 477:3743-3767. [PMID: 33045058 PMCID: PMC7557148 DOI: 10.1042/bcj20190161] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2020] [Revised: 09/19/2020] [Accepted: 09/21/2020] [Indexed: 12/13/2022]
Abstract
Seeds are essential for human civilization, so understanding the molecular events underpinning seed development and the zygotic embryo it contains is important. In addition, the approach of somatic embryogenesis is a critical propagation and regeneration strategy to increase desirable genotypes, to develop new genetically modified plants to meet agricultural challenges, and at a basic science level, to test gene function. We briefly review some of the transcription factors (TFs) involved in establishing primary and apical meristems during zygotic embryogenesis, as well as TFs necessary and/or sufficient to drive somatic embryo programs. We focus on the model plant Arabidopsis for which many tools are available, and review as well as speculate about comparisons and contrasts between zygotic and somatic embryo processes.
Collapse
Affiliation(s)
- Ran Tian
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546-0312, U.S.A
| | - Priyanka Paul
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546-0312, U.S.A
| | - Sanjay Joshi
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546-0312, U.S.A
| | - Sharyn E. Perry
- Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546-0312, U.S.A
| |
Collapse
|
20
|
Intercellular trafficking via plasmodesmata: molecular layers of complexity. Cell Mol Life Sci 2020; 78:799-816. [PMID: 32920696 PMCID: PMC7897608 DOI: 10.1007/s00018-020-03622-8] [Citation(s) in RCA: 34] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2020] [Revised: 07/28/2020] [Accepted: 08/13/2020] [Indexed: 12/12/2022]
Abstract
Plasmodesmata are intercellular pores connecting together most plant cells. These structures consist of a central constricted form of the endoplasmic reticulum, encircled by some cytoplasmic space, in turn delimited by the plasma membrane, itself ultimately surrounded by the cell wall. The presence and structure of plasmodesmata create multiple routes for intercellular trafficking of a large spectrum of molecules (encompassing RNAs, proteins, hormones and metabolites) and also enable local signalling events. Movement across plasmodesmata is finely controlled in order to balance processes requiring communication with those necessitating symplastic isolation. Here, we describe the identities and roles of the molecular components (specific sets of lipids, proteins and wall polysaccharides) that shape and define plasmodesmata structural and functional domains. We highlight the extensive and dynamic interactions that exist between the plasma/endoplasmic reticulum membranes, cytoplasm and cell wall domains, binding them together to effectively define plasmodesmata shapes and purposes.
Collapse
|
21
|
Grzyb M, Wróbel-Marek J, Kurczyńska E, Sobczak M, Mikuła A. Symplasmic Isolation Contributes to Somatic Embryo Induction and Development in the Tree Fern Cyathea delgadii Sternb. PLANT & CELL PHYSIOLOGY 2020; 61:1273-1284. [PMID: 32374847 PMCID: PMC7377347 DOI: 10.1093/pcp/pcaa058] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/17/2019] [Accepted: 04/26/2020] [Indexed: 06/11/2023]
Abstract
In this report, we describe studies on symplasmic communication and cellular rearrangement during direct somatic embryogenesis (SE) in the tree fern Cyathea delgadii. We analyzed changes in the symplasmic transport of low-molecular-weight fluorochromes, such as 8-hydroxypyrene-1,3,6-trisulfonic acid, trisodium salt (HPTS) and fluorescein (delivered to cells as fluorescein diacetate, FDA), within stipe explants and somatic embryos originating from single epidermal cells and developing during 16-d long culture. Induction of SE is preceded by a restriction in fluorochrome distribution between certain explant cells. Microscopic analysis showed a series of cellular changes like a decrease in vacuole size, increase in vacuole numbers, and increased density of cytoplasm and deposition of electron-dense material in cell walls that may be related with embryogenic transition. In somatic embryos, the limited symplasmic communication between cells was observed first in linear tri-cellular embryos. Further development of the fern embryo was associated with the formation of symplasmic domains corresponding to the four segments of the plant body. Using symplasmic tracers, we provided evidence that the changes in plasmodesmata permeability are corelated with somatic-to-embryogenic transition and somatic embryo development.
Collapse
Affiliation(s)
- Małgorzata Grzyb
- Department of Conservative Plant Biology, Polish Academy of Sciences Botanical Garden-Center for Biological Diversity Conservation in Powsin, Prawdziwka 2, Warsaw 02-973, Poland
| | - Justyna Wróbel-Marek
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellonska 28, 40-032 Katowice, Poland
| | - Ewa Kurczyńska
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Jagiellonska 28, 40-032 Katowice, Poland
| | - Mirosław Sobczak
- Institute of Biology, Department of Botany, Warsaw University of Life Sciences (SGGW), Nowoursynowska 159, Warsaw 02-787, Poland
| | - Anna Mikuła
- Department of Conservative Plant Biology, Polish Academy of Sciences Botanical Garden-Center for Biological Diversity Conservation in Powsin, Prawdziwka 2, Warsaw 02-973, Poland
| |
Collapse
|
22
|
Yan D, Liu Y. Diverse regulation of plasmodesmal architecture facilitates adaptation to phloem translocation. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:2505-2512. [PMID: 31872215 PMCID: PMC7210759 DOI: 10.1093/jxb/erz567] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/30/2019] [Accepted: 12/20/2019] [Indexed: 05/24/2023]
Abstract
The long-distance translocation of nutrients and mobile molecules between different terminals is necessary for plant growth and development. Plasmodesmata-mediated symplastic trafficking plays an important role in accomplishing this task. To facilitate intercellular transport, plants have evolved diverse plasmodesmata with distinct internal architecture at different cell-cell interfaces along the trafficking route. Correspondingly, different underlying mechanisms for regulating plasmodesmal structures have been gradually revealed. In this review, we highlight recent studies on various plasmodesmal architectures, as well as relevant regulators of their de novo formation and transition, responsible for phloem loading, transport, and unloading specifically. We also discuss the interesting but unaddressed questions relating to, and potential studies on, the adaptation of functional plasmodesmal structures.
Collapse
Affiliation(s)
- Dawei Yan
- State Key Laboratory of Crop Stress Adaptation and Improvement, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Yao Liu
- State Key Laboratory of Crop Stress Adaptation and Improvement, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng, China
| |
Collapse
|
23
|
Godel-Jedrychowska K, Kulinska-Lukaszek K, Horstman A, Soriano M, Li M, Malota K, Boutilier K, Kurczynska EU. Symplasmic isolation marks cell fate changes during somatic embryogenesis. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:2612-2628. [PMID: 31974549 PMCID: PMC7210756 DOI: 10.1093/jxb/eraa041] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2019] [Accepted: 01/22/2020] [Indexed: 05/05/2023]
Abstract
Cell-to-cell signalling is a major mechanism controlling plant morphogenesis. Transport of signalling molecules through plasmodesmata is one way in which plants promote or restrict intercellular signalling over short distances. Plasmodesmata are membrane-lined pores between cells that regulate the intercellular flow of signalling molecules through changes in their size, creating symplasmic fields of connected cells. Here we examine the role of plasmodesmata and symplasmic communication in the establishment of plant cell totipotency, using somatic embryo induction from Arabidopsis explants as a model system. Cell-to-cell communication was evaluated using fluorescent tracers, supplemented with histological and ultrastructural analysis, and correlated with expression of a WOX2 embryo reporter. We showed that embryogenic cells are isolated symplasmically from non-embryogenic cells regardless of the explant type (immature zygotic embryos or seedlings) and inducer system (2,4-dichlorophenoxyacetic acid or the BABY BOOM (BBM) transcription factor), but that the symplasmic domains in different explants differ with respect to the maximum size of molecule capable of moving through the plasmodesmata. Callose deposition in plasmodesmata preceded WOX2 expression in future sites of somatic embryo development, but later was greatly reduced in WOX2-expressing domains. Callose deposition was also associated with a decrease DR5 auxin response in embryogenic tissue. Treatment of explants with the callose biosynthesis inhibitor 2-deoxy-D-glucose supressed somatic embryo formation in all three systems studied, and also blocked the observed decrease in DR5 expression. Together these data suggest that callose deposition at plasmodesmata is required for symplasmic isolation and establishment of cell totipotency in Arabidopsis.
Collapse
Affiliation(s)
- Kamila Godel-Jedrychowska
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland
| | - Katarzyna Kulinska-Lukaszek
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland
| | - Anneke Horstman
- Bioscience, Wageningen University and Research, AA Wageningen, Netherlands
- Laboratory of Molecular Biology, Wageningen University and Research, AA Wageningen, Netherlands
| | - Mercedes Soriano
- Bioscience, Wageningen University and Research, AA Wageningen, Netherlands
| | - Mengfan Li
- Bioscience, Wageningen University and Research, AA Wageningen, Netherlands
- Laboratory of Molecular Biology, Wageningen University and Research, AA Wageningen, Netherlands
| | - Karol Malota
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in KatowiceKatowice, Poland
| | - Kim Boutilier
- Bioscience, Wageningen University and Research, AA Wageningen, Netherlands
| | - Ewa U Kurczynska
- Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland
| |
Collapse
|
24
|
Grison MS, Petit JD, Glavier M, Bayer EM. Quantification of Protein Enrichment at Plasmodesmata. Bio Protoc 2020; 10:e3545. [PMID: 33659519 DOI: 10.21769/bioprotoc.3545] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2019] [Revised: 01/13/2020] [Accepted: 01/14/2020] [Indexed: 11/02/2022] Open
Abstract
Intercellular communication plays a crucial role in the establishment of multicellular organisms by organizing and coordinating growth, development and defence responses. In plants, cell-to-cell communication takes place through nanometric membrane channels called plasmodesmata (PD). Understanding how PD dictate cellular connectivity greatly depends on a comprehensive knowledge of the molecular composition and the functional characterization of PD components. While proteomic and genetic approaches have been crucial to identify PD-associated proteins, in vivo fluorescence microscopy combined with fluorescent protein tagging is equally crucial to visualise the subcellular localisation of a protein of interest and gain knowledge about their dynamic behaviour. In this protocol we describe in detail a robust method for quantifying the degree of association of a given protein with PD, through ratiometric fluorescent intensity using confocal microscopy. Although developed for N. benthamiana and Arabidopsis, this protocol can be adapted to other plant species.
Collapse
Affiliation(s)
- Magali S Grison
- Laboratoire de Biogenèse Membranaire, UMR5200 CNRS, Université de Bordeaux, Villenave d'Ornon, France
| | - Jules D Petit
- Laboratoire de Biogenèse Membranaire, UMR5200 CNRS, Université de Bordeaux, Villenave d'Ornon, France.,Laboratoire de Biophysique Moléculaire aux Interfaces, TERRA Research Centre, GX ABT, Université de Liège, Gembloux, Belgium
| | - Marie Glavier
- Laboratoire de Biogenèse Membranaire, UMR5200 CNRS, Université de Bordeaux, Villenave d'Ornon, France
| | - Emmanuelle M Bayer
- Laboratoire de Biogenèse Membranaire, UMR5200 CNRS, Université de Bordeaux, Villenave d'Ornon, France
| |
Collapse
|
25
|
Chaudhary A, Chen X, Gao J, Leśniewska B, Hammerl R, Dawid C, Schneitz K. The Arabidopsis receptor kinase STRUBBELIG regulates the response to cellulose deficiency. PLoS Genet 2020; 16:e1008433. [PMID: 31961852 PMCID: PMC6994178 DOI: 10.1371/journal.pgen.1008433] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Revised: 01/31/2020] [Accepted: 01/04/2020] [Indexed: 12/16/2022] Open
Abstract
Plant cells are encased in a semi-rigid cell wall of complex build. As a consequence, cell wall remodeling is essential for the control of growth and development as well as the regulation of abiotic and biotic stress responses. Plant cells actively sense physico-chemical changes in the cell wall and initiate corresponding cellular responses. However, the underlying cell wall monitoring mechanisms remain poorly understood. In Arabidopsis the atypical receptor kinase STRUBBELIG (SUB) mediates tissue morphogenesis. Here, we show that SUB-mediated signal transduction also regulates the cellular response to a reduction in the biosynthesis of cellulose, a central carbohydrate component of the cell wall. SUB signaling affects early increase of intracellular reactive oxygen species, stress gene induction as well as ectopic lignin and callose accumulation upon exogenous application of the cellulose biosynthesis inhibitor isoxaben. Moreover, our data reveal that SUB signaling is required for maintaining cell size and shape of root epidermal cells and the recovery of root growth after transient exposure to isoxaben. SUB is also required for root growth arrest in mutants with defective cellulose biosynthesis. Genetic data further indicate that SUB controls the isoxaben-induced cell wall stress response independently from other known receptor kinase genes mediating this response, such as THESEUS1 or MIK2. We propose that SUB functions in a least two distinct biological processes: the control of tissue morphogenesis and the response to cell wall damage. Taken together, our results reveal a novel signal transduction pathway that contributes to the molecular framework underlying cell wall integrity signaling. Plant cells are encapsulated by a semi-rigid and biochemically complex cell wall. This particular feature has consequences for multiple biologically important processes, such as cell and organ growth or various stress responses. For a plant cell to grow the cell wall has to be modified to allow cell expansion, which is driven by outward-directed turgor pressure generated inside the cell. In return, changes in cell wall architecture need to be monitored by individual cells, and to be coordinated across cells in a growing tissue, for an organ to attain its regular size and shape. Cell wall surveillance also comes into play in the reaction against certain stresses, including for example infection by plant pathogens, many of which break through the cell wall during infection, thereby generating wall-derived factors that can induce defense responses. There is only limited knowledge regarding the molecular system that monitors the composition and status of the cell wall. Here we provide further insight into the mechanism. We show that the cell surface receptor STRUBBELIG, previously known to control organ development in Arabidopsis, also promotes the cell’s response to reduced amounts of cellulose, a main component of the cell wall.
Collapse
Affiliation(s)
- Ajeet Chaudhary
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Xia Chen
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Jin Gao
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Barbara Leśniewska
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Richard Hammerl
- Chair of Food Chemistry and Molecular Sensory Science, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Corinna Dawid
- Chair of Food Chemistry and Molecular Sensory Science, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
| | - Kay Schneitz
- Plant Developmental Biology, TUM School of Life Sciences, Technical University of Munich, Freising, Germany
- * E-mail:
| |
Collapse
|
26
|
Plasmodesmata Conductivity Regulation: A Mechanistic Model. PLANTS 2019; 8:plants8120595. [PMID: 31842374 PMCID: PMC6963776 DOI: 10.3390/plants8120595] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/28/2019] [Revised: 12/03/2019] [Accepted: 12/10/2019] [Indexed: 01/16/2023]
Abstract
Plant cells form a multicellular symplast via cytoplasmic bridges called plasmodesmata (Pd) and the endoplasmic reticulum (ER) that crosses almost all plant tissues. The Pd proteome is mainly represented by secreted Pd-associated proteins (PdAPs), the repertoire of which quickly adapts to environmental conditions and responds to biotic and abiotic stresses. Although the important role of Pd in stress-induced reactions is universally recognized, the mechanisms of Pd control are still not fully understood. The negative role of callose in Pd permeability has been convincingly confirmed experimentally, yet the roles of cytoskeletal elements and many PdAPs remain unclear. Here, we discuss the contribution of each protein component to Pd control. Based on known data, we offer mechanistic models of mature leaf Pd regulation in response to stressful effects.
Collapse
|
27
|
Deinum EE, Mulder BM, Benitez-Alfonso Y. From plasmodesma geometry to effective symplasmic permeability through biophysical modelling. eLife 2019; 8:49000. [PMID: 31755863 PMCID: PMC6994222 DOI: 10.7554/elife.49000] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2019] [Accepted: 11/16/2019] [Indexed: 12/12/2022] Open
Abstract
Regulation of molecular transport via intercellular channels called plasmodesmata (PDs) is important for both coordinating developmental and environmental responses among neighbouring cells, and isolating (groups of) cells to execute distinct programs. Cell-to-cell mobility of fluorescent molecules and PD dimensions (measured from electron micrographs) are both used as methods to predict PD transport capacity (i.e., effective symplasmic permeability), but often yield very different values. Here, we build a theoretical bridge between both experimental approaches by calculating the effective symplasmic permeability from a geometrical description of individual PDs and considering the flow towards them. We find that a dilated central region has the strongest impact in thick cell walls and that clustering of PDs into pit fields strongly reduces predicted permeabilities. Moreover, our open source multi-level model allows to predict PD dimensions matching measured permeabilities and add a functional interpretation to structural differences observed between PDs in different cell walls.
Collapse
Affiliation(s)
- Eva E Deinum
- Mathematical and statistical methods (Biometris), Wageningen University, Wageningen, Netherlands
| | - Bela M Mulder
- Living Matter Department, Institute AMOLF, Amsterdam, Netherlands.,Laboratory of Cell Biology, Wageningen University, Wageningen, Netherlands
| | | |
Collapse
|
28
|
Gao J, Chaudhary A, Vaddepalli P, Nagel MK, Isono E, Schneitz K. The Arabidopsis receptor kinase STRUBBELIG undergoes clathrin-dependent endocytosis. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:3881-3894. [PMID: 31107531 PMCID: PMC6685663 DOI: 10.1093/jxb/erz190] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2018] [Accepted: 04/09/2019] [Indexed: 05/04/2023]
Abstract
Signaling mediated by cell surface receptor kinases is central to the coordination of growth patterns during organogenesis. Receptor kinase signaling is in part controlled through endocytosis and subcellular distribution of the respective receptor kinase. For the majority of plant cell surface receptors, the underlying trafficking mechanisms are not characterized. In Arabidopsis, tissue morphogenesis requires the atypical receptor kinase STRUBBELIG (SUB). Here, we studied the endocytic mechanism of SUB. Our data revealed that a functional SUB-enhanced green fluorescent protein (EGFP) fusion is ubiquitinated in vivo. We further showed that plasma membrane-bound SUB:EGFP becomes internalized in a clathrin-dependent fashion. We also found that SUB:EGFP associates with the trans-Golgi network and accumulates in multivesicular bodies and the vacuole. Co-immunoprecipitation experiments revealed that SUB:EGFP and clathrin are present within the same protein complex. Our genetic analysis showed that SUB and CLATHRIN HEAVY CHAIN (CHC) 2 regulate root hair patterning. By contrast, genetic reduction of CHC activity ameliorates the floral defects of sub mutants. Taken together, the data indicate that SUB undergoes clathrin-mediated endocytosis, that this process does not rely on stimulation of SUB signaling by an exogenous agent, and that SUB genetically interacts with clathrin-dependent pathways in a tissue-specific manner.
Collapse
Affiliation(s)
- Jin Gao
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, Freising, Germany
| | - Ajeet Chaudhary
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, Freising, Germany
| | - Prasad Vaddepalli
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, Freising, Germany
- Present address: Laboratory of Biochemistry, Wageningen University, Wageningen, the Netherlands
| | - Marie-Kristin Nagel
- Department of Biology, Chair of Plant Physiology and Biochemistry, University of Konstanz, Konstanz, Germany
| | - Erika Isono
- Department of Biology, Chair of Plant Physiology and Biochemistry, University of Konstanz, Konstanz, Germany
| | - Kay Schneitz
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, Freising, Germany
- Correspondence:
| |
Collapse
|
29
|
Han X, Huang LJ, Feng D, Jiang W, Miu W, Li N. Plasmodesmata-Related Structural and Functional Proteins: The Long Sought-After Secrets of a Cytoplasmic Channel in Plant Cell Walls. Int J Mol Sci 2019; 20:ijms20122946. [PMID: 31212892 PMCID: PMC6627144 DOI: 10.3390/ijms20122946] [Citation(s) in RCA: 25] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2019] [Revised: 06/12/2019] [Accepted: 06/13/2019] [Indexed: 12/29/2022] Open
Abstract
Plant cells are separated by cellulose cell walls that impede direct cell-to-cell contact. In order to facilitate intercellular communication, plant cells develop unique cell-wall-spanning structures termed plasmodesmata (PD). PD are membranous channels that link the cytoplasm, plasma membranes, and endoplasmic reticulum of adjacent cells to provide cytoplasmic and membrane continuity for molecular trafficking. PD play important roles for the development and physiology of all plants. The structure and function of PD in the plant cell walls are highly dynamic and tightly regulated. Despite their importance, plasmodesmata are among the few plant cell organelles that remain poorly understood. The molecular properties of PD seem largely elusive or speculative. In this review, we firstly describe the general PD structure and its protein composition. We then discuss the recent progress in identification and characterization of PD-associated plant cell-wall proteins that regulate PD function, with particular emphasis on callose metabolizing and binding proteins, and protein kinases targeted to and around PD.
Collapse
Affiliation(s)
- Xiao Han
- College of Biological Science and Engineering, Fuzhou University, Fuzhou 350116, China.
| | - Li-Jun Huang
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China.
| | - Dan Feng
- Biotechnology Research Institute, Chinese Academy of Agricultural Science, Beijing 100081, China.
| | - Wenhan Jiang
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China.
| | - Wenzhuo Miu
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China.
| | - Ning Li
- State Key Laboratory of Cultivation and Protection for Non-Wood Forest Trees, Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China.
| |
Collapse
|
30
|
Small RNA Functions as a Trafficking Effector in Plant Immunity. Int J Mol Sci 2019; 20:ijms20112816. [PMID: 31181829 PMCID: PMC6600683 DOI: 10.3390/ijms20112816] [Citation(s) in RCA: 20] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2019] [Revised: 06/01/2019] [Accepted: 06/06/2019] [Indexed: 01/04/2023] Open
Abstract
Small RNAs represent a class of small but powerful agents that regulate development and abiotic and biotic stress responses during plant adaptation to a constantly challenging environment. Previous findings have revealed the important roles of small RNAs in diverse cellular processes. The recent discovery of bidirectional trafficking of small RNAs between different kingdoms has raised many interesting questions. The subsequent demonstration of exosome-mediated small RNA export provided a possible tool for further investigating how plants use small RNAs as a weapon during the arms race between plant hosts and pathogens. This review will focus on discussing the roles of small RNAs in plant immunity in terms of three aspects: the biogenesis of extracellular small RNAs and the transportation and trafficking small RNA-mediated gene silencing in pathogens.
Collapse
|
31
|
Yan D, Yadav SR, Paterlini A, Nicolas WJ, Petit JD, Brocard L, Belevich I, Grison MS, Vaten A, Karami L, El-Showk S, Lee JY, Murawska GM, Mortimer J, Knoblauch M, Jokitalo E, Markham JE, Bayer EM, Helariutta Y. Sphingolipid biosynthesis modulates plasmodesmal ultrastructure and phloem unloading. NATURE PLANTS 2019; 5:604-615. [PMID: 31182845 PMCID: PMC6565433 DOI: 10.1038/s41477-019-0429-5] [Citation(s) in RCA: 61] [Impact Index Per Article: 10.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/03/2018] [Accepted: 04/17/2019] [Indexed: 05/18/2023]
Abstract
During phloem unloading, multiple cell-to-cell transport events move organic substances to the root meristem. Although the primary unloading event from the sieve elements to the phloem pole pericycle has been characterized to some extent, little is known about post-sieve element unloading. Here, we report a novel gene, PHLOEM UNLOADING MODULATOR (PLM), in the absence of which plasmodesmata-mediated symplastic transport through the phloem pole pericycle-endodermis interface is specifically enhanced. Increased unloading is attributable to a defect in the formation of the endoplasmic reticulum-plasma membrane tethers during plasmodesmal morphogenesis, resulting in the majority of pores lacking a visible cytoplasmic sleeve. PLM encodes a putative enzyme required for the biosynthesis of sphingolipids with very-long-chain fatty acid. Taken together, our results indicate that post-sieve element unloading involves sphingolipid metabolism, which affects plasmodesmal ultrastructure. They also raise the question of how and why plasmodesmata with no cytoplasmic sleeve facilitate molecular trafficking.
Collapse
Affiliation(s)
- Dawei Yan
- The Sainsbury Laboratory, University of Cambridge, Cambridge, UK
| | - Shri Ram Yadav
- Helsinki Institute of Life Science/Institute of Biotechnology, University of Helsinki, Helsinki, Finland
- Department of Biotechnology, Indian Institute of Technology, Roorkee, India
| | - Andrea Paterlini
- The Sainsbury Laboratory, University of Cambridge, Cambridge, UK
| | - William J Nicolas
- Laboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Université de Bordeaux, Villenave d'Ornon, France
- Division of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA, USA
| | - Jules D Petit
- Laboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Université de Bordeaux, Villenave d'Ornon, France
- Laboratoire de Biophysique Moléculaire aux Interfaces, TERRA Research Centre, GX ABT, Université de Liège, Gembloux, Belgium
| | - Lysiane Brocard
- Bordeaux Imaging Centre, Plant Imaging Platform, UMS 3420, INRA-CNRS-INSERM, University of Bordeaux, Villenave-d'Ornon, France
| | - Ilya Belevich
- Helsinki Institute of Life Science/Institute of Biotechnology, University of Helsinki, Helsinki, Finland
| | - Magali S Grison
- Laboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Université de Bordeaux, Villenave d'Ornon, France
| | - Anne Vaten
- Helsinki Institute of Life Science/Institute of Biotechnology, University of Helsinki, Helsinki, Finland
| | - Leila Karami
- Helsinki Institute of Life Science/Institute of Biotechnology, University of Helsinki, Helsinki, Finland
- Department of Horticulture, Faculty of Agriculture and Natural Resources, Persian Gulf University, Bushehr, Iran
| | - Sedeer El-Showk
- Helsinki Institute of Life Science/Institute of Biotechnology, University of Helsinki, Helsinki, Finland
| | - Jung-Youn Lee
- Department of Plant and Soil Sciences, Delaware Biotechnology Institute, University of Delaware, Newark, DE, USA
| | - Gosia M Murawska
- Biosciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
- Joint Bioenergy Institute, Emeryville, CA, USA
| | - Jenny Mortimer
- Biosciences Area, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
- Joint Bioenergy Institute, Emeryville, CA, USA
| | - Michael Knoblauch
- School of Biological Sciences, Washington State University, Pullman, WA, USA
| | - Eija Jokitalo
- Helsinki Institute of Life Science/Institute of Biotechnology, University of Helsinki, Helsinki, Finland
| | - Jennifer E Markham
- Department of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE, USA
| | - Emmanuelle M Bayer
- Laboratoire de Biogenèse Membranaire, UMR 5200, CNRS, Université de Bordeaux, Villenave d'Ornon, France.
| | - Ykä Helariutta
- The Sainsbury Laboratory, University of Cambridge, Cambridge, UK.
- Helsinki Institute of Life Science/Institute of Biotechnology, University of Helsinki, Helsinki, Finland.
| |
Collapse
|
32
|
Benitez-Alfonso Y. The Role of Abscisic Acid in the Regulation of Plasmodesmata and Symplastic Intercellular Transport. PLANT & CELL PHYSIOLOGY 2019; 60:713-714. [PMID: 30847492 PMCID: PMC6455045 DOI: 10.1093/pcp/pcz046] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Accepted: 03/05/2019] [Indexed: 05/02/2023]
Affiliation(s)
- Yoselin Benitez-Alfonso
- Centre for Plant Science, School of Biology, University of Leeds, Leeds, UK
- Corresponding author: E-mail,
| |
Collapse
|
33
|
Milewska-Hendel A, Witek W, Rypień A, Zubko M, Baranski R, Stróż D, Kurczyńska EU. The development of a hairless phenotype in barley roots treated with gold nanoparticles is accompanied by changes in the symplasmic communication. Sci Rep 2019; 9:4724. [PMID: 30886208 PMCID: PMC6423127 DOI: 10.1038/s41598-019-41164-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Accepted: 02/26/2019] [Indexed: 11/09/2022] Open
Abstract
Uptake of water and nutrients by roots affects the ontogenesis of the whole plant. Nanoparticles, e.g. gold nanoparticles, have a broad range of applications in many fields which leads to the transfer of these materials into the environment. Thus, the understanding of their impact on the growth and development of the root system is an emerging issue. During our studies on the effect of positively charged gold nanoparticles on the barley roots, a hairless phenotype was found. We investigated whether this phenotype correlates with changes in symplasmic communication, which is an important factor that regulates, among others, differentiation of the rhizodermis into hair and non-hair cells. The results showed no restriction in symplasmic communication in the treated roots, in contrast to the control roots, in which the trichoblasts and atrichoblasts were symplasmically isolated during their differentiation. Moreover, differences concerning the root morphology, histology, ultrastructure and the cell wall composition were detected between the control and the treated roots. These findings suggest that the harmful effect of nanoparticles on plant growth may, among others, consist in disrupting the symplasmic communication/isolation, which leads to the development of a hairless root phenotype, thus limiting the functioning of the roots.
Collapse
Affiliation(s)
- Anna Milewska-Hendel
- Department of Cell Biology, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, 28 Jagiellońska Street, 40-032, Katowice, Poland.
| | - Weronika Witek
- Department of Cell Biology, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, 28 Jagiellońska Street, 40-032, Katowice, Poland
| | - Aleksandra Rypień
- Laboratory of Microscopy Techniques, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, 28 Jagiellońska Street, 40-032, Katowice, Poland
| | - Maciej Zubko
- Institute of Materials Science, Faculty of Computer Science and Materials Science, University of Silesia in Katowice, 75 Pułku Piechoty Street 1a, Chorzów, 41-500, Poland
- Department of Physics, University of Hradec Králové, Hradec Králové, Czech Republic
| | - Rafal Baranski
- Institute of Plant Biology and Biotechnology, Faculty of Biotechnology and Horticulture, University of Agriculture in Krakow, Al. 29 Listopada 54, 31-425, Krakow, Poland
| | - Danuta Stróż
- Institute of Materials Science, Faculty of Computer Science and Materials Science, University of Silesia in Katowice, 75 Pułku Piechoty Street 1a, Chorzów, 41-500, Poland
| | - Ewa U Kurczyńska
- Department of Cell Biology, Faculty of Biology and Environmental Protection, University of Silesia in Katowice, 28 Jagiellońska Street, 40-032, Katowice, Poland.
| |
Collapse
|
34
|
Abstract
During the establishment of root-nodule symbioses between plants and nitrogen-fixing rhizobia, nodule organogenesis in the inner cortex needs to be precisely coordinated with the rhizobial infection site at the root epidermis. A new study shows that rhizobia induce localized callose turnover at plasmodesmata to allow spatiotemporal synchronization of the two processes through symplastic connections.
Collapse
Affiliation(s)
- Caroline Gutjahr
- Technical University of Munich (TUM), School of Life Sciences Weihenstephan, Plant Genetics, Emil Ramann Str. 4, 85354 Freising, Germany.
| |
Collapse
|
35
|
Gaudioso-Pedraza R, Beck M, Frances L, Kirk P, Ripodas C, Niebel A, Oldroyd GED, Benitez-Alfonso Y, de Carvalho-Niebel F. Callose-Regulated Symplastic Communication Coordinates Symbiotic Root Nodule Development. Curr Biol 2018; 28:3562-3577.e6. [PMID: 30416059 DOI: 10.1016/j.cub.2018.09.031] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2018] [Revised: 07/27/2018] [Accepted: 09/13/2018] [Indexed: 01/08/2023]
Abstract
The formation of nitrogen-fixing nodules in legumes involves the initiation of synchronized programs in the root epidermis and cortex to allow rhizobial infection and nodule development. In this study, we provide evidence that symplastic communication, regulated by callose turnover at plasmodesmata (PD), is important for coordinating nodule development and infection in Medicago truncatula. Here, we show that rhizobia promote a reduction in callose levels in inner tissues where nodules initiate. This downregulation coincides with the localized expression of M. truncatula β-1,3-glucanase 2 (MtBG2), encoding a novel PD-associated callose-degrading enzyme. Spatiotemporal analyses revealed that MtBG2 expression expands from dividing nodule initials to rhizobia-colonized cortical and epidermal tissues. As shown by the transport of fluorescent molecules in vivo, symplastic-connected domains are created in rhizobia-colonized tissues and enhanced in roots constitutively expressing MtBG2. MtBG2-overexpressing roots additionally displayed reduced levels of PD-associated callose. Together, these findings suggest an active role for MtBG2 in callose degradation and in the formation of symplastic domains during sequential nodule developmental stages. Interfering with symplastic connectivity led to drastic nodulation phenotypes. Roots ectopically expressing β-1,3-glucanases (including MtBG2) exhibited increased nodule number, and those expressing MtBG2 RNAi constructs or a hyperactive callose synthase (under symbiotic promoters) showed defective nodulation phenotypes. Obstructing symplastic connectivity appears to block a signaling pathway required for the expression of NODULE INCEPTION (NIN) and its target NUCLEAR FACTOR-YA1 (NF-YA1) in the cortex. We conclude that symplastic intercellular communication is proactively enhanced by rhizobia, and this is necessary for appropriate coordination of bacterial infection and nodule development.
Collapse
Affiliation(s)
| | - Martina Beck
- LIPM, Université de Toulouse, INRA, CNRS, 31326 Castanet-Tolosan, France
| | - Lisa Frances
- LIPM, Université de Toulouse, INRA, CNRS, 31326 Castanet-Tolosan, France
| | - Philip Kirk
- Centre for Plant Sciences, School of Biology, University of Leeds, Leeds LS2 9JT, UK
| | - Carolina Ripodas
- LIPM, Université de Toulouse, INRA, CNRS, 31326 Castanet-Tolosan, France
| | - Andreas Niebel
- LIPM, Université de Toulouse, INRA, CNRS, 31326 Castanet-Tolosan, France
| | - Giles E D Oldroyd
- Sainsbury Laboratory, Cambridge University, Bateman Street, Cambridge CB2 1LR, UK
| | | | | |
Collapse
|
36
|
Liu L, Chen X. Intercellular and systemic trafficking of RNAs in plants. NATURE PLANTS 2018; 4:869-878. [PMID: 30390090 PMCID: PMC7155933 DOI: 10.1038/s41477-018-0288-5] [Citation(s) in RCA: 89] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2016] [Accepted: 09/21/2018] [Indexed: 05/14/2023]
Abstract
Plants have evolved dynamic and complex networks of cell-to-cell communication to coordinate and adapt their growth and development to a variety of environmental changes. In addition to small molecules, such as metabolites and phytohormones, macromolecules such as proteins and RNAs also act as signalling agents in plants. As information molecules, RNAs can move locally between cells through plasmodesmata, and over long distances through phloem. Non-cell-autonomous RNAs may act as mobile signals to regulate plant development, nutrient allocation, gene silencing, antiviral defence, stress responses and many other physiological processes in plants. Recent work has shed light on mobile RNAs and, in some cases, uncovered their roles in intercellular and systemic signalling networks. This review summarizes the current knowledge of local and systemic RNA movement, and discusses the potential regulatory mechanisms and biological significance of RNA trafficking in plants.
Collapse
Affiliation(s)
- Lin Liu
- Guangdong Provincial Key Laboratory for Plant Epigenetics, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China
- Longhua Bioindustry and Innovation Research Institute, Shenzhen University, Shenzhen, China
| | - Xuemei Chen
- Department of Botany and Plant Sciences, Institute of Integrative Genome Biology, University of California, Riverside, CA, USA.
| |
Collapse
|
37
|
Lu KJ, Danila FR, Cho Y, Faulkner C. Peeking at a plant through the holes in the wall - exploring the roles of plasmodesmata. THE NEW PHYTOLOGIST 2018; 218:1310-1314. [PMID: 29574753 DOI: 10.1111/nph.15130] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Plasmodesmata (PD) are membrane-lined pores that connect neighbouring plant cells and allow molecular exchange via the symplast. Past studies have revealed the basic structure of PD, some of the transport mechanisms for molecules through PD, and a variety of physiological processes in which they function. Recently, with the help of newly developed technologies, several exciting new features of PD have been revealed. New PD structures were observed during early formation of PD and between phloem sieve elements and phloem pole pericycle cells in roots. Both observations challenge our current understanding of PD structure and function. Research into novel physiological responses, which are regulated by PD, indicates that we have not yet fully explored the potential contribution of PD to overall plant function. In this Viewpoint article, we summarize some of the recent advances in understanding the structure and function of PD and propose the challenges ahead for the community.
Collapse
Affiliation(s)
- Kuan-Ju Lu
- Laboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708 WE, Wageningen, the Netherlands
| | - Florence R Danila
- ARC Centre of Excellence for Translational Photosynthesis, Research School of Biology, Australian National University, Canberra, ACT, 2601, Australia
| | - Yueh Cho
- Molecular and Biological Agricultural Sciences Program, Taiwan International Graduate Programme, National Chung Hsing University and Academia Sinica, Taipei, 11529, Taiwan
- Institute of Plant and Microbial Biology, Academia Sinica, Taipei, 11529, Taiwan
- Graduate Institute of Biotechnology, National Chung Hsing University, Taichung, 40227, Taiwan
| | | |
Collapse
|
38
|
Anne P, Hardtke CS. Phloem function and development-biophysics meets genetics. CURRENT OPINION IN PLANT BIOLOGY 2018; 43:22-28. [PMID: 29278791 DOI: 10.1016/j.pbi.2017.12.005] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2017] [Revised: 11/10/2017] [Accepted: 12/12/2017] [Indexed: 05/07/2023]
Abstract
Evolution of the vascular tissues allowed plants to efficiently settle land, occupy new ecological niches, and thereby crucially shape earth's biosphere. Of the two conducting cell types in the plant vasculature, the tubular network of phloem sieve elements transports phloem sap from source to sink organs. Recent years have witnessed the identification of ever more regulators of sieve element differentiation, as well as a more detailed understanding of phloem physiology and function. From molecular regulators of the commitment to sieve element fate, to enzymatic executors of the differentiation process, the toolbox to investigate sieve element formation has been greatly enlarged. To connect the various players in different genetic layers, and thus to ultimately attain a comprehensive description and understanding of sieve element development at the molecular level, appears to be within reach.
Collapse
Affiliation(s)
- Pauline Anne
- Department of Plant Molecular Biology, University of Lausanne, Biophore Building, CH-1015 Lausanne, Switzerland
| | - Christian S Hardtke
- Department of Plant Molecular Biology, University of Lausanne, Biophore Building, CH-1015 Lausanne, Switzerland.
| |
Collapse
|
39
|
Gerlitz N, Gerum R, Sauer N, Stadler R. Photoinducible DRONPA-s: a new tool for investigating cell-cell connectivity. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2018; 94:751-766. [PMID: 29654648 DOI: 10.1111/tpj.13918] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2017] [Revised: 03/02/2018] [Accepted: 03/26/2018] [Indexed: 06/08/2023]
Abstract
The development of multicellular plants relies on the ability of their cells to exchange solutes, proteins and signalling compounds through plasmodesmata, symplasmic pores in the plant cell wall. The aperture of plasmodesmata is regulated in response to developmental cues or external factors such as pathogen attack. This regulation enables tight control of symplasmic cell-to-cell transport. Here we report on an elegant non-invasive method to quantify the passive movement of protein between selected cells even in deeper tissue layers. The system is based on the fluorescent protein DRONPA-s, which can be switched on and off repeatedly by illumination with different light qualities. Using transgenic 35S::DRONPA-s Arabidopsis thaliana and a confocal microscope it was possible to activate DRONPA-s fluorescence in selected cells of the root meristem. This enabled us to compare movement of DRONPA-s from the activated cells into the respective neighbouring cells. Our analyses showed that pericycle cells display the highest efflux capacity with a good lateral connectivity. In contrast, root cap cells showed the lowest efflux of DRONPA-s. Plasmodesmata of quiescent centre cells mediated a stronger efflux into columella cells than into stele initials. To simplify measurements of fluorescence intensity in a complex tissue we developed software that allows simultaneous analyses of fluorescence intensities of several neighbouring cells. Our DRONPA-s system generates reproducible data and is a valuable tool for studying symplasmic connectivity.
Collapse
Affiliation(s)
- Nadja Gerlitz
- Molecular Plant Physiology, University of Erlangen, Staudtstrasse 5, Erlangen, 91058, Germany
| | - Richard Gerum
- Biophysics, University of Erlangen, Henkestrasse 91, Erlangen, 91052, Germany
| | - Norbert Sauer
- Molecular Plant Physiology, University of Erlangen, Staudtstrasse 5, Erlangen, 91058, Germany
| | - Ruth Stadler
- Molecular Plant Physiology, University of Erlangen, Staudtstrasse 5, Erlangen, 91058, Germany
| |
Collapse
|
40
|
Fujita H, Kawaguchi M. Spatial regularity control of phyllotaxis pattern generated by the mutual interaction between auxin and PIN1. PLoS Comput Biol 2018; 14:e1006065. [PMID: 29614066 PMCID: PMC5882125 DOI: 10.1371/journal.pcbi.1006065] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2017] [Accepted: 03/02/2018] [Indexed: 11/19/2022] Open
Abstract
Phyllotaxis, the arrangement of leaves on a plant stem, is well known because of its beautiful geometric configuration, which is derived from the constant spacing between leaf primordia. This phyllotaxis is established by mutual interaction between a diffusible plant hormone auxin and its efflux carrier PIN1, which cooperatively generate a regular pattern of auxin maxima, small regions with high auxin concentrations, leading to leaf primordia. However, the molecular mechanism of the regular pattern of auxin maxima is still largely unknown. To better understand how the phyllotaxis pattern is controlled, we investigated mathematical models based on the auxin-PIN1 interaction through linear stability analysis and numerical simulations, focusing on the spatial regularity control of auxin maxima. As in previous reports, we first confirmed that this spatial regularity can be reproduced by a highly simplified and abstract model. However, this model lacks the extracellular region and is not appropriate for considering the molecular mechanism. Thus, we investigated how auxin maxima patterns are affected under more realistic conditions. We found that the spatial regularity is eliminated by introducing the extracellular region, even in the presence of direct diffusion between cells or between extracellular spaces, and this strongly suggests the existence of an unknown molecular mechanism. To unravel this mechanism, we assumed a diffusible molecule to verify various feedback interactions with auxin-PIN1 dynamics. We revealed that regular patterns can be restored by a diffusible molecule that mediates the signaling from auxin to PIN1 polarization. Furthermore, as in the one-dimensional case, similar results are observed in the two-dimensional space. These results provide a great insight into the theoretical and molecular basis for understanding the phyllotaxis pattern. Our theoretical analysis strongly predicts a diffusible molecule that is pivotal for the phyllotaxis pattern but is yet to be determined experimentally.
Collapse
Affiliation(s)
- Hironori Fujita
- National Institute for Basic Biology, Okazaki, Aichi, Japan
- Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, Japan
- * E-mail:
| | - Masayoshi Kawaguchi
- National Institute for Basic Biology, Okazaki, Aichi, Japan
- Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Okazaki, Aichi, Japan
| |
Collapse
|
41
|
Liang D. A Salutary Role of Reactive Oxygen Species in Intercellular Tunnel-Mediated Communication. Front Cell Dev Biol 2018; 6:2. [PMID: 29503816 PMCID: PMC5821100 DOI: 10.3389/fcell.2018.00002] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2017] [Accepted: 01/18/2018] [Indexed: 12/17/2022] Open
Abstract
The reactive oxygen species, generally labeled toxic due to high reactivity without target specificity, are gradually uncovered as signaling molecules involved in a myriad of biological processes. But one important feature of ROS roles in macromolecule movement has not caught attention until recent studies with technique advance and design elegance have shed lights on ROS signaling for intercellular and interorganelle communication. This review begins with the discussions of genetic and chemical studies on the regulation of symplastic dye movement through intercellular tunnels in plants (plasmodesmata), and focuses on the ROS regulatory mechanisms concerning macromolecule movement including small RNA-mediated gene silencing movement and protein shuttling between cells. Given the premise that intercellular tunnels (bridges) in mammalian cells are the key physical structures to sustain intercellular communication, movement of macromolecules and signals is efficiently facilitated by ROS-induced membrane protrusions formation, which is analogously applied to the interorganelle communication in plant cells. Although ROS regulatory differences between plant and mammalian cells exist, the basis for ROS-triggered conduit formation underlies a unifying conservative theme in multicellular organisms. These mechanisms may represent the evolutionary advances that have enabled multicellularity to gain the ability to generate and utilize ROS to govern material exchanges between individual cells in oxygenated environment.
Collapse
Affiliation(s)
- Dacheng Liang
- Hubei Collaborative Innovation Center for Grain Industry, School of Agriculture, Yangtze University, Jingzhou, China.,Engineering Research Center of Ecology and Agricultural Use of Wetland, Ministry of Education, Yangtze University, Jingzhou, China
| |
Collapse
|
42
|
Lu KJ, De Rybel B, van Mourik H, Weijers D. Regulation of intercellular TARGET OF MONOPTEROS 7 protein transport in the Arabidopsis root. Development 2018; 145:dev.152892. [PMID: 29358212 DOI: 10.1242/dev.152892] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2017] [Accepted: 12/13/2017] [Indexed: 01/24/2023]
Abstract
Intercellular communication coordinates hypophysis establishment in the Arabidopsis embryo. Previously, TARGET OF MONOPTEROS 7 (TMO7) was reported to be transported to the hypophysis, the founder cell of the root cap, and RNA suppression experiments implicated its function in embryonic root development. However, the protein properties and mechanisms mediating TMO7 protein transport, and the role the movement plays in development remained unclear. Here, we report that in the post-embryonic root, TMO7 and its close relatives are transported into the root cap through plasmodesmata in a sequence-dependent manner. We also show that nuclear residence is crucial for TMO7 transport, and postulate that modification, potentially phosphorylation, labels TMO7 for transport. Additionally, three novel CRISPR/Cas9-induced tmo7 alleles confirmed a role in hypophysis division, but suggest complex redundancies with close relatives in root formation. Finally, we demonstrate that TMO7 transport is biologically meaningful, as local expression partially restores hypophysis division in a plasmodesmal protein transport mutant. Our study identifies motifs and amino acids that are pivotal for TMO7 protein transport, and establishes the importance of TMO7 in hypophysis and root development.
Collapse
Affiliation(s)
- Kuan-Ju Lu
- Laboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708 WE, Wageningen, The Netherlands
| | - Bert De Rybel
- Laboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708 WE, Wageningen, The Netherlands.,Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 927, 9052 Ghent, Belgium.,VIB Center for Plant Systems Biology, Technologiepark 927, 9052 Ghent, Belgium
| | - Hilda van Mourik
- Laboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708 WE, Wageningen, The Netherlands
| | - Dolf Weijers
- Laboratory of Biochemistry, Wageningen University, Stippeneng 4, 6708 WE, Wageningen, The Netherlands
| |
Collapse
|
43
|
|
44
|
Nicolas WJ, Grison MS, Bayer EM. Shaping intercellular channels of plasmodesmata: the structure-to-function missing link. JOURNAL OF EXPERIMENTAL BOTANY 2017; 69:91-103. [PMID: 28992136 DOI: 10.1093/jxb/erx225] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/11/2023]
Abstract
Plasmodesmata (PD) are a hallmark of the plant kingdom and a cornerstone of plant biology and physiology, forming the conduits for the cell-to-cell transfer of proteins, RNA and various metabolites, including hormones. They connect the cytosols and endomembranes of cells, which allows enhanced cell-to-cell communication and synchronization. Because of their unique position as intercellular gateways, they are at the frontline of plant defence and signalling and constitute the battleground for virus replication and spreading. The membranous organization of PD is remarkable, where a tightly furled strand of endoplasmic reticulum comes into close apposition with the plasma membrane, the two connected by spoke-like elements. The role of these structural features is, to date, still not completely understood. Recent data on PD seem to point in an unexpected direction, establishing a close parallel between PD and membrane contact sites and defining plasmodesmal membranes as microdomains. However, the implications of this new viewpoint are not fully understood. Aided by available phylogenetic data, this review attempts to reassess the function of the different elements comprising the PD and the relevance of membrane lipid composition and biophysics in defining specialized microdomains of PD, critical for their function.
Collapse
Affiliation(s)
- William J Nicolas
- Laboratoire de Biogénèse Membranaire, UMR 5200 CNRS, University of Bordeaux, France
| | - Magali S Grison
- Laboratoire de Biogénèse Membranaire, UMR 5200 CNRS, University of Bordeaux, France
| | - Emmanuelle M Bayer
- Laboratoire de Biogénèse Membranaire, UMR 5200 CNRS, University of Bordeaux, France
| |
Collapse
|
45
|
Kawade K, Tanimoto H, Horiguchi G, Tsukaya H. Spatially Different Tissue-Scale Diffusivity Shapes ANGUSTIFOLIA3 Gradient in Growing Leaves. Biophys J 2017; 113:1109-1120. [PMID: 28877493 DOI: 10.1016/j.bpj.2017.06.072] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2017] [Revised: 06/28/2017] [Accepted: 06/29/2017] [Indexed: 12/01/2022] Open
Abstract
The spatial gradient of signaling molecules is pivotal for establishing developmental patterns of multicellular organisms. It has long been proposed that these gradients could arise from the pure diffusion process of signaling molecules between cells, but whether this simplest mechanism establishes the formation of the tissue-scale gradient remains unclear. Plasmodesmata are unique channel structures in plants that connect neighboring cells for molecular transport. In this study, we measured cellular- and tissue-scale kinetics of molecular transport through plasmodesmata in Arabidopsis thaliana developing leaf primordia by fluorescence recovery assays. These trans-scale measurements revealed biophysical properties of diffusive molecular transport through plasmodesmata and revealed that the tissue-scale diffusivity, but not the cellular-scale diffusivity, is spatially different along the leaf proximal-to-distal axis. We found that the gradient in cell size along the developmental axis underlies this spatially different tissue-scale diffusivity. We then asked how this diffusion-based framework functions in establishing a signaling gradient of endogenous molecules. ANGUSTIFOLIA3 (AN3) is a transcriptional co-activator, and as we have shown here, it forms a long-range signaling gradient along the leaf proximal-to-distal axis to determine a cell-proliferation domain. By genetically engineering AN3 mobility, we assessed each contribution of cell-to-cell movement and tissue growth to the distribution of the AN3 gradient. We constructed a diffusion-based theoretical model using these quantitative data to analyze the AN3 gradient formation and demonstrated that it could be achieved solely by the diffusive molecular transport in a growing tissue. Our results indicate that the spatially different tissue-scale diffusivity is a core mechanism for AN3 gradient formation. This provides evidence that the pure diffusion process establishes the formation of the long-range signaling gradient in leaf development.
Collapse
Affiliation(s)
- Kensuke Kawade
- Okazaki Institute for Integrative Bioscience, School of Life Science, Graduate University for Advanced Studies (SOKENDAI), Okazaki, Aichi, Japan; National Institute for Basic Biology, School of Life Science, Graduate University for Advanced Studies (SOKENDAI), Okazaki, Aichi, Japan; Department of Basic Biology, School of Life Science, Graduate University for Advanced Studies (SOKENDAI), Okazaki, Aichi, Japan.
| | | | - Gorou Horiguchi
- Department of Life Science, College of Science, Rikkyo University, Tokyo, Japan; Research Center for Life Science, Rikkyo University, Tokyo, Japan
| | - Hirokazu Tsukaya
- Okazaki Institute for Integrative Bioscience, School of Life Science, Graduate University for Advanced Studies (SOKENDAI), Okazaki, Aichi, Japan; Department of Biological Sciences, Graduate School of Science, University of Tokyo, Tokyo, Japan
| |
Collapse
|
46
|
Nicolas WJ, Grison MS, Trépout S, Gaston A, Fouché M, Cordelières FP, Oparka K, Tilsner J, Brocard L, Bayer EM. Architecture and permeability of post-cytokinesis plasmodesmata lacking cytoplasmic sleeves. NATURE PLANTS 2017; 3:17082. [PMID: 28604682 DOI: 10.1038/nplants.2017.82] [Citation(s) in RCA: 108] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2017] [Accepted: 05/08/2017] [Indexed: 05/08/2023]
Abstract
Plasmodesmata are remarkable cellular machines responsible for the controlled exchange of proteins, small RNAs and signalling molecules between cells. They are lined by the plasma membrane (PM), contain a strand of tubular endoplasmic reticulum (ER), and the space between these two membranes is thought to control plasmodesmata permeability. Here, we have reconstructed plasmodesmata three-dimensional (3D) ultrastructure with an unprecedented level of 3D information using electron tomography. We show that within plasmodesmata, ER-PM contact sites undergo substantial remodelling events during cell differentiation. Instead of being open pores, post-cytokinesis plasmodesmata present such intimate ER-PM contact along the entire length of the pores that no intermembrane gap is visible. Later on, during cell expansion, the plasmodesmata pore widens and the two membranes separate, leaving a cytosolic sleeve spanned by tethers whose presence correlates with the appearance of the intermembrane gap. Surprisingly, the post-cytokinesis plasmodesmata allow diffusion of macromolecules despite the apparent lack of an open cytoplasmic sleeve, forcing the reassessment of the mechanisms that control plant cell-cell communication.
Collapse
Affiliation(s)
- William J Nicolas
- Laboratory of Membrane Biogenesis, UMR5200 CNRS, University of Bordeaux, 71 Avenue Edouard Bourlaux, 33883 Villenave d'Ornon Cedex, France
| | - Magali S Grison
- Laboratory of Membrane Biogenesis, UMR5200 CNRS, University of Bordeaux, 71 Avenue Edouard Bourlaux, 33883 Villenave d'Ornon Cedex, France
| | - Sylvain Trépout
- Institut Curie, Centre de Recherche, Bât. 112, Centre Universitaire, 91405 Orsay Cedex, France
| | - Amélia Gaston
- Laboratory of Membrane Biogenesis, UMR5200 CNRS, University of Bordeaux, 71 Avenue Edouard Bourlaux, 33883 Villenave d'Ornon Cedex, France
| | - Mathieu Fouché
- Laboratory of Membrane Biogenesis, UMR5200 CNRS, University of Bordeaux, 71 Avenue Edouard Bourlaux, 33883 Villenave d'Ornon Cedex, France
| | - Fabrice P Cordelières
- Bordeaux Imaging Centre, UMS 3420 CNRS, CNRS-INSERM-University of Bordeaux 146, rue Léo Saignat, 33076 Bordeaux Cedex, France
| | - Karl Oparka
- Institute of Molecular Plant Sciences, University of Edinburgh, Edinburgh EH9 3BF, UK
| | - Jens Tilsner
- Biomedical Sciences Research Complex, University of St Andrews, St Andrews KY16 9ST, UK
- Cell and Molecular Sciences, James Hutton Institute, Dundee DD2 5DA, UK
| | - Lysiane Brocard
- Bordeaux Imaging Centre, Plant Imaging Plateform, UMS 3420, INRA-CNRS-INSERM-University of Bordeaux, 71 Avenue Edouard Bourlaux, 33883 Villenave-d'Ornon Cedex, France
| | - Emmanuelle M Bayer
- Laboratory of Membrane Biogenesis, UMR5200 CNRS, University of Bordeaux, 71 Avenue Edouard Bourlaux, 33883 Villenave d'Ornon Cedex, France
| |
Collapse
|
47
|
Vaddepalli P, Fulton L, Wieland J, Wassmer K, Schaeffer M, Ranf S, Schneitz K. The cell wall-localized atypical β-1,3 glucanase ZERZAUST controls tissue morphogenesis in Arabidopsis thaliana. Development 2017; 144:2259-2269. [PMID: 28507000 DOI: 10.1242/dev.152231] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Accepted: 05/04/2017] [Indexed: 01/17/2023]
Abstract
Orchestration of cellular behavior in plant organogenesis requires integration of intercellular communication and cell wall dynamics. The underlying signaling mechanisms are poorly understood. Tissue morphogenesis in Arabidopsis depends on the receptor-like kinase STRUBBELIG. Mutations in ZERZAUST were previously shown to result in a strubbelig-like mutant phenotype. Here, we report on the molecular identification and functional characterization of ZERZAUST We show that ZERZAUST encodes a putative GPI-anchored β-1,3 glucanase suggested to degrade the cell wall polymer callose. However, a combination of in vitro, cell biological and genetic experiments indicate that ZERZAUST is not involved in the regulation of callose accumulation. Nonetheless, Fourier-transformed infrared-spectroscopy revealed that zerzaust mutants show defects in cell wall composition. Furthermore, the results indicate that ZERZAUST represents a mobile apoplastic protein, and that its carbohydrate-binding module family 43 domain is required for proper subcellular localization and function whereas its GPI anchor is dispensable. Our collective data reveal that the atypical β-1,3 glucanase ZERZAUST acts in a non-cell-autonomous manner and is required for cell wall organization during tissue morphogenesis.
Collapse
Affiliation(s)
- Prasad Vaddepalli
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, 85354 Freising, Germany
| | - Lynette Fulton
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, 85354 Freising, Germany
| | - Jennifer Wieland
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, 85354 Freising, Germany
| | - Katrin Wassmer
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, 85354 Freising, Germany
| | - Milena Schaeffer
- Lehrstuhl für Phytopathologie, Wissenschaftszentrum Weihenstephan, Technische Universität München, 85354 Freising, Germany
| | - Stefanie Ranf
- Lehrstuhl für Phytopathologie, Wissenschaftszentrum Weihenstephan, Technische Universität München, 85354 Freising, Germany
| | - Kay Schneitz
- Entwicklungsbiologie der Pflanzen, Wissenschaftszentrum Weihenstephan, Technische Universität München, 85354 Freising, Germany
| |
Collapse
|
48
|
Dmitrieva VA, Ivanova AN, Tyutereva EV, Evkaikina AI, Klimova EA, Voitsekhovskaja OV. Chlorophyllide-a-Oxygenase (CAO) deficiency affects the levels of singlet oxygen and formation of plasmodesmata in leaves and shoot apical meristems of barley. PLANT SIGNALING & BEHAVIOR 2017; 12:e1300732. [PMID: 28272988 PMCID: PMC5437820 DOI: 10.1080/15592324.2017.1300732] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/21/2016] [Revised: 02/20/2017] [Accepted: 02/21/2017] [Indexed: 05/19/2023]
Abstract
In plants, organogenesis and specification of cell layers and tissues rely on precise symplastic delivery of regulatory molecules via plasmodesmata. Accordingly, abundance and aperture of plasmodesmata at individual cell boundaries should be controlled by the plant. Recently, studies in Arabidopsis established reactive oxygen species as major regulators of plasmodesmata formation and gating. We show that in a barley mutant deficient in the synthesis of chlorophyll b, the numbers of plasmodesmata in leaves and in the shoot apical meristem are significantly higher than in the corresponding wild type, probably due to redox imbalance in the mutant. The resulting disturbance of symplasmic transport is likely to be the reason for the observed delayed floral transition in these mutants.
Collapse
Affiliation(s)
- Valeria A. Dmitrieva
- Laboratory of Plant Ecological Physiology, Komarov Botanical Institute, Russian Academy of Sciences, St.-Petersburg, Russia
| | - Alexandra N. Ivanova
- Laboratory of Plant Ecological Physiology, Komarov Botanical Institute, Russian Academy of Sciences, St.-Petersburg, Russia
- Laboratory of Plant Anatomy and Morphology, Komarov Botanical Institute, Russian Academy of Sciences, St.-Petersburg, Russia
| | - Elena V. Tyutereva
- Laboratory of Plant Ecological Physiology, Komarov Botanical Institute, Russian Academy of Sciences, St.-Petersburg, Russia
| | - Anastasiia I. Evkaikina
- Laboratory of Plant Ecological Physiology, Komarov Botanical Institute, Russian Academy of Sciences, St.-Petersburg, Russia
| | - Ekaterina A. Klimova
- Laboratory of Plant Ecological Physiology, Komarov Botanical Institute, Russian Academy of Sciences, St.-Petersburg, Russia
| | - Olga V. Voitsekhovskaja
- Laboratory of Plant Ecological Physiology, Komarov Botanical Institute, Russian Academy of Sciences, St.-Petersburg, Russia
- CONTACT Olga V. Voitsekhovskaja Plant Ecological Physiology, Komarov Botanical Institute RAS, ul. Professora Popova, 2, Saint Petersburg, 197376, Russia
| |
Collapse
|
49
|
Pompa A, De Marchis F, Pallotta MT, Benitez-Alfonso Y, Jones A, Schipper K, Moreau K, Žárský V, Di Sansebastiano GP, Bellucci M. Unconventional Transport Routes of Soluble and Membrane Proteins and Their Role in Developmental Biology. Int J Mol Sci 2017; 18:ijms18040703. [PMID: 28346345 PMCID: PMC5412289 DOI: 10.3390/ijms18040703] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2017] [Revised: 03/22/2017] [Accepted: 03/23/2017] [Indexed: 12/30/2022] Open
Abstract
Many proteins and cargoes in eukaryotic cells are secreted through the conventional secretory pathway that brings proteins and membranes from the endoplasmic reticulum to the plasma membrane, passing through various cell compartments, and then the extracellular space. The recent identification of an increasing number of leaderless secreted proteins bypassing the Golgi apparatus unveiled the existence of alternative protein secretion pathways. Moreover, other unconventional routes for secretion of soluble or transmembrane proteins with initial endoplasmic reticulum localization were identified. Furthermore, other proteins normally functioning in conventional membrane traffic or in the biogenesis of unique plant/fungi organelles or in plasmodesmata transport seem to be involved in unconventional secretory pathways. These alternative pathways are functionally related to biotic stress and development, and are becoming more and more important in cell biology studies in yeast, mammalian cells and in plants. The city of Lecce hosted specialists working on mammals, plants and microorganisms for the inaugural meeting on “Unconventional Protein and Membrane Traffic” (UPMT) during 4–7 October 2016. The main aim of the meeting was to include the highest number of topics, summarized in this report, related to the unconventional transport routes of protein and membranes.
Collapse
Affiliation(s)
- Andrea Pompa
- Institute of Biosciences and Bioresources-Research Division of Perugia, National Research Council (CNR), via della Madonna Alta 130, 06128 Perugia, Italy.
| | - Francesca De Marchis
- Institute of Biosciences and Bioresources-Research Division of Perugia, National Research Council (CNR), via della Madonna Alta 130, 06128 Perugia, Italy.
| | | | | | - Alexandra Jones
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, UK.
| | - Kerstin Schipper
- Institute for Microbiology, Heinrich Heine University Düsseldorf, Düsseldorf 40225, Germany.
| | - Kevin Moreau
- Clinical Biochemistry, Institute of Metabolic Science, University of Cambridge, Cambridge CB2 1TN, UK.
| | - Viktor Žárský
- Department of Experimental Plant Biology, Faculty of Science, Charles University, 12844, Prague 2, Czech Republic.
- Institute of Experimental Botany, v.v.i., the Czech Academy of Sciences, 16502, Prague 6, Czech Republic.
| | - Gian Pietro Di Sansebastiano
- Department of Biological and Environmental Sciences and Technologies (DISTEBA), University of Salento, S.P. 6, 73100 Lecce, Italy.
| | - Michele Bellucci
- Institute of Biosciences and Bioresources-Research Division of Perugia, National Research Council (CNR), via della Madonna Alta 130, 06128 Perugia, Italy.
| |
Collapse
|
50
|
Kitagawa M, Jackson D. Plasmodesmata-Mediated Cell-to-Cell Communication in the Shoot Apical Meristem: How Stem Cells Talk. PLANTS (BASEL, SWITZERLAND) 2017; 6:E12. [PMID: 28257070 PMCID: PMC5371771 DOI: 10.3390/plants6010012] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/06/2017] [Accepted: 02/23/2017] [Indexed: 01/30/2023]
Abstract
Positional information is crucial for the determination of plant cell fates, and it is established based on coordinated cell-to-cell communication, which in turn is essential for plant growth and development. Plants have evolved a unique communication pathway, with tiny channels called plasmodesmata (PD) spanning the cell wall. PD interconnect most cells in the plant and generate a cytoplasmic continuum, to mediate short- and long-distance trafficking of various molecules. Cell-to-cell communication through PD plays a role in transmitting positional signals, however, the regulatory mechanisms of PD-mediated trafficking are still largely unknown. The induction and maintenance of stem cells in the shoot apical meristem (SAM) depends on PDmediated cell-to-cell communication, hence, it is an optimal model for dissecting the regulatory mechanisms of PD-mediated cell-to-cell communication and its function in specifying cell fates. In this review, we summarize recent knowledge of PD-mediated cell-to-cell communication in the SAM, and discuss mechanisms underlying molecular trafficking through PD and its role in plant development.
Collapse
Affiliation(s)
- Munenori Kitagawa
- Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.
| | - David Jackson
- Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA.
| |
Collapse
|