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Liu C, Wen L, Cui Y, Ahammed GJ, Cheng Y. Metal transport proteins and transcription factor networks in plant responses to cadmium stress. PLANT CELL REPORTS 2024; 43:218. [PMID: 39153039 DOI: 10.1007/s00299-024-03303-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2024] [Accepted: 07/30/2024] [Indexed: 08/19/2024]
Abstract
Cadmium (Cd) contamination poses a significant threat to agriculture and human health due to its high soil mobility and toxicity. This review synthesizes current knowledge on Cd uptake, transport, detoxification, and transcriptional regulation in plants, emphasizing the roles of metal transport proteins and transcription factors (TFs). We explore transporter families like NRAMP, HMA, ZIP, ABC, and YSL in facilitating Cd movement within plant tissues, identifying potential targets for reducing Cd accumulation in crops. Additionally, regulatory TF families, including WRKY, MYB, bHLH, and ERF, are highlighted for their roles in modulating gene expression to counteract Cd toxicity. This review consolidates the existing literature on plant-Cd interactions, providing insights into established mechanisms and identifying gaps for future research. Understanding these mechanisms is crucial for developing strategies to enhance plant tolerance, ensure food safety, and promote sustainable agriculture amidst increasing heavy-metal pollution.
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Affiliation(s)
- Chaochao Liu
- College of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, 212018, People's Republic of China
- State Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Institute of Vegetables, Xianghu Laboratory, Hangzhou, 311231, People's Republic of China
| | - Lang Wen
- College of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, 212018, People's Republic of China
| | - Yijia Cui
- College of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, 212018, People's Republic of China
| | - Golam Jalal Ahammed
- College of Horticulture and Plant Protection, Henan University of Science and Technology, Luoyang, 471023, People's Republic of China.
| | - Yuan Cheng
- State Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Institute of Vegetables, Xianghu Laboratory, Hangzhou, 311231, People's Republic of China.
- State Key Laboratory Breeding Base for Zhejiang Sustainable Pest and Disease Control, Institute of Vegetables, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, People's Republic of China.
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Zhang M, Gao JY, Dong SC, Chang MH, Zhu JX, Guo DL, Guo CH, Bi YD. Alfalfa MsbHLH115 confers tolerance to cadmium stress through activating the iron deficiency response in Arabidopsis thaliana. FRONTIERS IN PLANT SCIENCE 2024; 15:1358673. [PMID: 38410731 PMCID: PMC10894947 DOI: 10.3389/fpls.2024.1358673] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Accepted: 01/29/2024] [Indexed: 02/28/2024]
Abstract
Cadmium (Cd) pollution severely affects plant growth and development, posing risks to human health throughout the food chain. Improved iron (Fe) nutrients could mitigate Cd toxicity in plants, but the regulatory network involving Cd and Fe interplay remains unresolved. Here, a transcription factor gene of alfalfa, MsbHLH115 was verified to respond to iron deficiency and Cd stress. Overexpression of MsbHLH115 enhanced tolerance to Cd stress, showing better growth and less ROS accumulation in Arabidopsis thaliana. Overexpression of MsbHLH115 significantly enhanced Fe and Zn accumulation and did not affect Cd, Mn, and Cu concentration in Arabidopsis. Further investigations revealed that MsbHLH115 up-regulated iron homeostasis regulation genes, ROS-related genes, and metal chelation and detoxification genes, contributing to attenuating Cd toxicity. Y1H, EMSA, and LUC assays confirmed the physical interaction between MsbHLH115 and E-box, which is present in the promoter regions of most of the above-mentioned iron homeostasis regulatory genes. The transient expression experiment showed that MsbHLH115 interacted with MsbHLH121pro. The results suggest that MsbHLH115 may directly regulate the iron-deficiency response system and indirectly regulate the metal detoxification response mechanism, thereby enhancing plant Cd tolerance. In summary, enhancing iron accumulation through transcription factor regulation holds promise for improving plant tolerance to Cd toxicity, and MsbHLH115 is a potential candidate for addressing Cd toxicity issues.
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Affiliation(s)
- Miao Zhang
- Heilongjiang Provincial Key Laboratory of Molecular Cell Genetics and Genetic Breeding, College of Life Science and Technology, Harbin Normal University, Harbin, China
| | - Jing-Yun Gao
- Heilongjiang Provincial Key Laboratory of Molecular Cell Genetics and Genetic Breeding, College of Life Science and Technology, Harbin Normal University, Harbin, China
| | - Shi-Chen Dong
- Heilongjiang Provincial Key Laboratory of Molecular Cell Genetics and Genetic Breeding, College of Life Science and Technology, Harbin Normal University, Harbin, China
| | - Meng-Han Chang
- Heilongjiang Provincial Key Laboratory of Molecular Cell Genetics and Genetic Breeding, College of Life Science and Technology, Harbin Normal University, Harbin, China
| | - Jing-Xuan Zhu
- Heilongjiang Provincial Key Laboratory of Molecular Cell Genetics and Genetic Breeding, College of Life Science and Technology, Harbin Normal University, Harbin, China
| | - Dong-Lin Guo
- Heilongjiang Provincial Key Laboratory of Molecular Cell Genetics and Genetic Breeding, College of Life Science and Technology, Harbin Normal University, Harbin, China
| | - Chang-Hong Guo
- Heilongjiang Provincial Key Laboratory of Molecular Cell Genetics and Genetic Breeding, College of Life Science and Technology, Harbin Normal University, Harbin, China
| | - Ying-Dong Bi
- Institute of Crops Tillage and Cultivation, Heilongjiang Academy of Agricultural Sciences, Harbin, China
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3
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Pang B, Zuo D, Yang T, Yu J, Zhou L, Hou Y, Yu J, Ye L, Gu L, Wang H, Du X, Liu Y, Zhu B. BcaSOD1 enhances cadmium tolerance in transgenic Arabidopsis by regulating the expression of genes related to heavy metal detoxification and arginine synthesis. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 206:108299. [PMID: 38150840 DOI: 10.1016/j.plaphy.2023.108299] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Accepted: 12/19/2023] [Indexed: 12/29/2023]
Abstract
Cadmium (Cd), which is a nonessential heavy metal element for organisms, can have a severe impact on the growth and development of organisms that absorb excessive Cd. Studies have shown that Brassica carinata, a semiwild oil crop, has strong tolerance to various abiotic stresses, and RNA-seq has revealed that the B. carinata superoxide dismutase gene (BcaSOD1) likely responds to Cd stress. To elucidate the BcaSOD1 function involved in tolerance of Cd stress, we cloned the coding sequences of BcaSOD1 from a purple B. carinata accession and successfully transferred it into Arabidopsis thaliana. The subcellular localization results demonstrated that BcaSOD1 was primarily located in the plasma membrane, mitochondria and nucleus. Overexpression of BcaSOD1 in transgenic Arabidopsis (OE) effectively decreased the toxicity caused by Cd stress. Compared to the WT (wild type lines), the OE lines exhibited significantly increased activities of antioxidant enzymes (APX, CAT, POD, and SOD) after exposure to 2.5 mM CdCl2. The Cd content of underground (root) in the OE line was dominantly higher than that in the WT; however, the Cd content of aboveground (shoot) was comparable between the OE and WT types. Moreover, the qRT‒PCR results showed that several heavy metal detoxification-related genes (AtIREG2, AtMTP3, AtHMA3, and AtNAS4) were significantly upregulated in the roots of OE lines under Cd treatment, suggesting that these genes are likely involved in Cd absorption in the roots of OE lines. In addition, both comparable transcriptome and qRT-PCR analyses revealed that exogenous BcaSOD1 noticeably facilitates detoxification by stimulating the expression of two arginine (Arg) biosynthesis genes (AtGDH1 and AtGDH2) while inhibiting the expression of AtARGAH1, a negative regulator in biosynthesis of Arg. The Arg content was subsequently confirmed to be significantly enhanced in OE lines under Cd treatment, indicating that BcaSOD1 likely strengthened Cd tolerance by regulating the expression of Arg-related genes. This study demonstrates that BcaSOD1 can enhance Cd tolerance and reveals the molecular mechanism of this gene, providing valuable insights into the molecular mechanism of Cd tolerance in plants.
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Affiliation(s)
- Biao Pang
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Dan Zuo
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Tinghai Yang
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Junxing Yu
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Lizhou Zhou
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Yunyan Hou
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Jie Yu
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Lvlan Ye
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Lei Gu
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Hongcheng Wang
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Xuye Du
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China
| | - Yingliang Liu
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China.
| | - Bin Zhu
- School of Life Sciences, Guizhou Normal University, Guiyang, 550025, People's Republic of China.
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Stanton C, Rodríguez-Celma J, Krämer U, Sanders D, Balk J. BRUTUS-LIKE (BTSL) E3 ligase-mediated fine-tuning of Fe regulation negatively affects Zn tolerance of Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2023; 74:5767-5782. [PMID: 37393944 PMCID: PMC10540732 DOI: 10.1093/jxb/erad243] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Accepted: 07/01/2023] [Indexed: 07/04/2023]
Abstract
The mineral micronutrients zinc (Zn) and iron (Fe) are essential for plant growth and human nutrition, but interactions between the homeostatic networks of these two elements are not fully understood. Here we show that loss of function of BTSL1 and BTSL2, which encode partially redundant E3 ubiquitin ligases that negatively regulate Fe uptake, confers tolerance to Zn excess in Arabidopsis thaliana. Double btsl1 btsl2 mutant seedlings grown on high Zn medium accumulated similar amounts of Zn in roots and shoots to the wild type, but suppressed the accumulation of excess Fe in roots. RNA-sequencing analysis showed that roots of mutant seedlings had relatively higher expression of genes involved in Fe uptake (IRT1, FRO2, and NAS) and in Zn storage (MTP3 and ZIF1). Surprisingly, mutant shoots did not show the transcriptional Fe deficiency response which is normally induced by Zn excess. Split-root experiments suggested that within roots the BTSL proteins act locally and downstream of systemic Fe deficiency signals. Together, our data show that constitutive low-level induction of the Fe deficiency response protects btsl1 btsl2 mutants from Zn toxicity. We propose that BTSL protein function is disadvantageous in situations of external Zn and Fe imbalances, and formulate a general model for Zn-Fe interactions in plants.
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Affiliation(s)
- Camilla Stanton
- Department of Biochemistry and Metabolism, John Innes Centre, Norwich NR4 7UH, UK
| | | | - Ute Krämer
- Faculty of Biology and Biotechnology, Ruhr University Bochum, D-44801 Bochum, Germany
| | - Dale Sanders
- Department of Biochemistry and Metabolism, John Innes Centre, Norwich NR4 7UH, UK
| | - Janneke Balk
- Department of Biochemistry and Metabolism, John Innes Centre, Norwich NR4 7UH, UK
- School of Biological Sciences, University of East Anglia, Norwich NR4 7TJ, UK
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Meng YT, Zhang XL, Wu Q, Shen RF, Zhu XF. Transcription factor ANAC004 enhances Cd tolerance in Arabidopsis thaliana by regulating cell wall fixation, translocation and vacuolar detoxification of Cd, ABA accumulation and antioxidant capacity. JOURNAL OF HAZARDOUS MATERIALS 2022; 436:129121. [PMID: 35580499 DOI: 10.1016/j.jhazmat.2022.129121] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Revised: 04/29/2022] [Accepted: 05/07/2022] [Indexed: 06/15/2023]
Abstract
Cadmium (Cd) is toxic to plants, which have evolved multiple strategies to cope with Cd stress. In this study, we identified a nucleus-localized NAC-type transcription factor, ANAC004, which is induced by Cd and involved in regulating Cd resistance in Arabidopsis. First, anac004 mutants exhibited Cd sensitive phenotype and accumulated more Cd (12-23% higher than wild type in roots and shoots); plants overexpressing ANAC004 showed the opposite phenotype and with lower Cd accumulation. Second, ANAC004 enhanced Cd fixation in cell wall hemicellulose, thus reducing Cd2+ influx into root cells. Third, ANAC004 was involved in the process of vacuolar Cd compartmentalization by regulating the genes associated with Cd detoxification (PCS1/2, NAS4, ABCC1/2/3, MTP1/3, IREG2 and NRAMP3/4). Fourth, ANAC004 reduced root-to-shoot Cd translocation through down-regulated Cd translocation-related genes (HMA2 and HMA4). Finally, the expression of genes related to ABA synthesis (AAO3, MCSU, and NCED3) and the activities of antioxidant enzymes (SOD, POD and CAT) were all reduced in anac004 mutants, leading to reduced levels of endogenous ABA and increased accumulation of reactive oxygen species (O2.- and H2O2) and MDA, which ultimately weakened resistance to Cd. Our results suggest that ANAC004 decreases Cd accumulation in Arabidopsis through enhancing cell wall Cd immobilization, increasing vacuolar Cd detoxification, and inhibiting Cd translocation, thus improving Cd resistance, processes that might be mediated by ABA signaling and antioxidant defense systems.
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Affiliation(s)
- Yu Ting Meng
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiao Long Zhang
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Qi Wu
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Ren Fang Shen
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Xiao Fang Zhu
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing 210008, China; University of Chinese Academy of Sciences, Beijing 100049, China.
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Sabella E, Aprile A, Tenuzzo BA, Carata E, Panzarini E, Luvisi A, De Bellis L, Vergine M. Effects of Cadmium on Root Morpho-Physiology of Durum Wheat. FRONTIERS IN PLANT SCIENCE 2022; 13:936020. [PMID: 35812940 PMCID: PMC9260267 DOI: 10.3389/fpls.2022.936020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Accepted: 06/08/2022] [Indexed: 06/15/2023]
Abstract
Durum wheat [Triticum turgidum L. subsp. durum (Desf.) Husn.] can accumulate a high level of Cd in grains with a significant variability depending on cultivars. Understanding how this toxic element is distributed in cereal tissues and grains is essential to improve the nutritional quality of cereal-based products. The main objective of this work was to investigate roots of durum wheat plants (cv. Iride) exposed to different Cd concentrations (0.5 and 5.0 μM) to identify the mechanisms involved in Cd management. Results showed that the root morphology was altered by Cd treatment both at macroscopic (increased number of tips and primary root length) and ultrastructural levels (cell membrane system damaged, cell walls thickened and enriched in suberin). On the other side, Cd was localized in vesicles and in cell walls, and the metal colocalized with the phytosiderophore nicotianamine (NA). Overall, data suggest that Cd is chelated by NA and then compartmentalized, through vesicular trafficking, in the root thickened walls reducing Cd translocation to the aerial organs of the plant.
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Li Y, Li Y, Cui Y, Xie Y, Shi Y, Shang Y, Ma F, Zhang J, Li C. GABA-mediated inhibition of cadmium uptake and accumulation in apples. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 300:118867. [PMID: 35063536 DOI: 10.1016/j.envpol.2022.118867] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2021] [Revised: 12/30/2021] [Accepted: 01/15/2022] [Indexed: 06/14/2023]
Abstract
GABA, a four-carbon non-protein amino acid, plays an important role in animals and plants. We previously found GABA could alleviate alkali stress in apple seedlings. However, its physiological mechanism under heavy metal cadmium (Cd) stress need to be further studied. Thus, we explored its biological role in response to Cd stress. It was verified that 0.5 mM GABA could effectively alleviate Cd toxicity. Using NMT technique, we found that exogenous GABA could significantly reduce the net Cd2+ fluxes in apple roots, and Cd content was significantly lower than that in roots under Cd stress. Further analysis indicated exogenous GABA could significantly reduce the expression of genes related to the uptake and transport of Cd in apples under Cd stress. In addition, exogenous GABA could significantly increase the content of amino acids in apple roots under Cd stress. GAD is a key enzyme in GABA synthesis, we obtained transgenic apple roots of overexpression MdGAD1. Compared with the control, transgenic roots accumulated less Cd, maintained lower Cd uptake by roots, and lower expression of related transport genes. These results showed that GABA could effectively alleviate Cd toxicity in apple seedlings and provide a new perspective of GABA to alleviate Cd stress.
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Affiliation(s)
- Yuxing Li
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Yunhao Li
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Yinglian Cui
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Yuanmei Xie
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Yanjiao Shi
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Yueming Shang
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Fengwang Ma
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Jing Zhang
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China
| | - Cuiying Li
- State Key Laboratory of Crop Stress Biology for Arid Areas, Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A&F University, Yangling, Shaanxi, 712100, China.
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Wang Q, Huang D, Niu D, Deng J, Ma F, Liu C. Overexpression of auxin response gene MdIAA24 enhanced cadmium tolerance in apple (Malus domestica). ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021; 225:112734. [PMID: 34482065 DOI: 10.1016/j.ecoenv.2021.112734] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/08/2021] [Revised: 08/27/2021] [Accepted: 08/29/2021] [Indexed: 06/13/2023]
Abstract
Cadmium (Cd), a phytotoxic heavy metal accumulated in plants and fruits, has significant adverse effects on plant growth and development as well as human health. In particular, Cd pollution has become a serious agricultural issue in recent years. Apple is one of the most popular fruits consumed at the global scale. Improving apple Cd resistance via reductions in Cd absorption can benefit apple tree growth and ensure fruit safety. In this study, we determined that, under the 200 μM Cd treatment, 35S::MdIAA24 apple plants exhibited more biomass and less Cd accumulation in the tested tissues compared to wild type (WT). Furthermore, the 35S::MdIAA24 apple plants demonstrated more favorable photosynthesis characteristics, less reactive oxygen species (ROS) and a greater amount of active antioxidant enzymes under the Cd condition than WT. The expression levels of the Cd uptake genes were observed to be lower in the 35S::MdIAA24 apple plants compared with those of the WT under the Cd treatment. The results highlight the ability of the overexpression of MdIAA24 to enhance apple Cd resistance by improving antioxidant capacity and reducing Cd absorption.
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Affiliation(s)
- Qian Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling 712100, Shaanxi, China
| | - Dong Huang
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling 712100, Shaanxi, China
| | - Dongshan Niu
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling 712100, Shaanxi, China
| | - Jie Deng
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling 712100, Shaanxi, China
| | - Fengwang Ma
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling 712100, Shaanxi, China.
| | - Changhai Liu
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling 712100, Shaanxi, China.
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Mo F, Li H, Li Y, Chen X, Wang M, Li Z, Deng N, Yang Y, Huang X, Zhang R, Deng W. Physiological, biochemical, and transcriptional regulation in a leguminous forage Trifolium pratense L. responding to silver ions. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2021; 162:531-546. [PMID: 33773229 DOI: 10.1016/j.plaphy.2021.02.046] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2021] [Accepted: 02/26/2021] [Indexed: 06/12/2023]
Abstract
Trifolium pratense L. (red clover) is an important leguminous crop with great potential for Ag-contaminated environment remediation. Whereas, the molecular mechanisms of Ag tolerance in red clover are largely unknown. Red clover seedlings were used for physiological and transcriptomic investigation under 0, 20, 50, and 100 mg/L Ag+ stress in our research to reveal potential molecular resistance mechanism. Research showed that red clover possessed fairly strong Ag absorbance capacity, the Ag level reached 0.14 and 2.35 mg/g·FW in the leaves and roots under 100 mg/L AgNO3 stress condition. Root fresh weight, root dry weight, root water content, and photosynthetic pigments contents were significantly decreased with elevating AgNO3 concentration. Obvious withered plant tissue, microstructure disorder, and disrupted organelles were observed. In vitro evaluations (e.g., PI and DCFH-DA staining) represented that AgNO3 at high concentration (100 mg/L) exhibited obvious inhibition on cell viability, which was due possibly to the induction of reactive oxygen species (ROS) accumulation. A total of 44643 differentially expressed genes (DEGs) were identified under Ag stress, covering 27155 upregulated and 17488 downregulated genes. 12 stress-responsive DEGs was authenticated utilizing real-time quantitative PCR (qRT-PCR). Gene ontology (GO) analysis revealed that the DEGs were mostly related to metal ion binding (molecular function), nucleus (cellular component), and defense response (biological process). Involved DEGs in sequence-specific DNA binding transcription factor activity, response to various hormones (e.g., abscisic acid, IAA/Auxin, salicylic acid, and etc), calcium signal transduction, and protein ubiquitination were concluded to play crucial roles in Ag tolerance of red clover. On the other hand, Kyoto Encyclopedia of Genes and Genomes (KEGG) database annotated several stress responsive pathways such as plant-pathogen interaction, phenylpropanoid biosynthesis, ubiquitin mediated proteolysis, hormone signal transduction, and autophagy. Several down-regulated genes (e.g., RSF2, RCD1, DOX1, and etc) were identified indicating possible metabolic disturbance. Besides, protein-protein interaction network (PPI) identified several pivotal genes such as ribosomal proteins, TIR, and ZAT.
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Affiliation(s)
- Fan Mo
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Haibo Li
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Yinghua Li
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Xi Chen
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Mingshuai Wang
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Zhe Li
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Ningcan Deng
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Yue Yang
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Xin Huang
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Ran Zhang
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
| | - Wenhe Deng
- School of Resources and Civil Engineering, Northeastern University, 11 Wenhua Road, Heping District, Shenyang, 110819, China.
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10
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Huang D, Wang Q, Zou Y, Ma M, Jing G, Ma F, Li C. Silencing MdGH3-2/12 in apple reduces cadmium resistance via the regulation of AM colonization. CHEMOSPHERE 2021; 269:129407. [PMID: 33387790 DOI: 10.1016/j.chemosphere.2020.129407] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2020] [Revised: 11/28/2020] [Accepted: 12/19/2020] [Indexed: 06/12/2023]
Abstract
Arbuscular mycorrhizal fungi (AMF) can form a symbiotic relationship with most terrestrial plant roots, promote plant growth, and heavy metal (HM) tolerance and thus plays a crucial role in phytoremediation. However, research on the relationship between colonization level and HM tolerance is limited. In this study, apple (Malus domestica) Gretchen Hagen3 genes MdGH3-2/12 silencing plants were treated with four AMF and Cd combination treatments to determine AMF colonization levels, biomass, Cd accumulation, photosynthesis, fluorescence, reactive oxygen species (ROS) and antioxidant substance accumulation, and Cd uptake, transport and detoxification gene expression levels. Results indicate the greater sensitivity of transgenic plants under AMF inoculation and Cd treatment compared with wild type (WT) via lower AMF colonization levels, biomass accumulation, photosynthetic parameters, and the accumulation and clearance homeostasis of ROS, as well as lower detoxification expression levels and higher Cd uptake and transport expression levels. Our study essentially demonstrates that MdGH3-2/12 plays an important role in Cd stress tolerance by regulating AM colonization in apple.
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Affiliation(s)
- Dong Huang
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, China
| | - Qian Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, China
| | - Yangjun Zou
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, China
| | - Mengnan Ma
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, China
| | - Guangquan Jing
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, China
| | - Fengwang Ma
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, China
| | - Chao Li
- State Key Laboratory of Crop Stress Biology for Arid Areas/Shaanxi Key Laboratory of Apple, College of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, China.
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11
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Li H, Pu P, Li X, Gong Y, An D, Zhang L, Lv J. Sulfur application reduces cadmium uptake in edible parts of pakchoi (Brassica chinensis L.) by cadmium chelation and vacuolar sequestration. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2020; 194:110402. [PMID: 32151867 DOI: 10.1016/j.ecoenv.2020.110402] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2019] [Revised: 02/26/2020] [Accepted: 02/26/2020] [Indexed: 05/24/2023]
Abstract
Sulfur (S) application in pakchoi (Brassica chinensis L.) cultivation is vital for reducing cadmium (Cd) accumulation in the plants. However, the mechanism of S application on Cd uptake and translocation in pakchoi is unclear. In this study, a hydroponic experiment was performed to investigate the effects of S application on Cd accumulation in pakchoi at one Cd concentration (50 μM, in comparison to the control condition, 0 μM) and three S levels (0, 2, 4 mM). The results showed that excessive S application (4 mM) reduced Cd accumulation and alleviated pakchoi growth inhibition caused by Cd stress in shoots and roots. With increased S application, the proportion of Cd in the vacuolar fraction and the proportion of NaCl-extractable Cd increased in roots. Additionally, S application increased the content of glutathione (GSH) and phytochelatins (PCs). The reduced Cd uptake and accumulation in pakchoi shoots could have been due to increased Cd chelation and vacuolar sequestration in roots. In addition, sufficient S application (2 mM) increased the expression of γ-glutamylcysteine synthetase (GSH1) and nicotinamide synthase (NAS) in roots, and excessive S application upregulated the expression of ATP sulfurylase (ATPS) and phytochelatin synthase (PCs). This study provides evidence for the mechanism of mitigating Cd toxicity in pakchoi and will be helpful for developing strategies to reduce Cd accumulation in the edible parts of pakchoi through S fertilizer application.
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Affiliation(s)
- Hailan Li
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Peng Pu
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Xiaorui Li
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Yanzhen Gong
- College of Chemistry & Pharmacy, Northwest A&F University, Yangling, Shaanxi, China
| | - Disheng An
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Lixin Zhang
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Jinyin Lv
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi, China.
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12
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Xu X, Zhang S, Cheng Z, Li T, Jia Y, Wang G, Yang Z, Xian J, Yang Y, Zhou W. Transcriptome analysis revealed cadmium accumulation mechanisms in hyperaccumulator Siegesbeckia orientalis L. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:18853-18865. [PMID: 32207009 DOI: 10.1007/s11356-020-08387-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2019] [Accepted: 03/10/2020] [Indexed: 05/28/2023]
Abstract
Siegesbeckia orientalis L. was identified as a novel Cd-hyperaccumulator and valuable phytoremediation material. However, the molecular mechanisms underlying Cd accumulation in S. orientalis are largely unknown. In this study, RNA-Seq analysis was performed to study the Cd-accumulating mechanisms in its roots with or without Cd treatment. The RNA-seq analysis generated 312 million pairs of clean reads and 78G sequencing data. De novo transcriptome assembly produced 355,070 transcripts with an average length of 823.59 bp and 194,207 unigenes with an average length of 605.68 bp. Comparative transcriptome analyses identified a large number of differentially expressed genes in roots under Cd stress, and functional annotation suggested that S. orientalis utilizes various biological pathways involving many gene networks working simultaneously to cope with the stress. This study revealed that four biological pathways were mainly involved in S. orientalis tolerance to Cd stress, including reactive oxygen species scavenging, phenylpropanoid biosynthesis pathway, Cd absorption and transport, and ABA signaling pathway. The genes related to photosynthesis and heavy metal transport are likely the potential candidates and could be further investigated to determine their roles in Cd tolerance in S. orientalis roots. These findings will be useful to understand the Cd accumulation mechanisms in S. orientalis and facilitate the study of phytoremediation at the molecular level in plants.
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Affiliation(s)
- Xiaoxun Xu
- School of Environment Sciences, Sichuan Agricultural University, Chengdu, 611130, China
- Key Laboratory of Soil Environment Protection of Sichuan Province, Sichuan Agricultural University, Chengdu, 611130, China
| | - Shirong Zhang
- School of Environment Sciences, Sichuan Agricultural University, Chengdu, 611130, China.
- Key Laboratory of Soil Environment Protection of Sichuan Province, Sichuan Agricultural University, Chengdu, 611130, China.
| | - Zhang Cheng
- School of Environment Sciences, Sichuan Agricultural University, Chengdu, 611130, China
| | - Ting Li
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Yongxia Jia
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
| | - Guiyin Wang
- School of Environment Sciences, Sichuan Agricultural University, Chengdu, 611130, China
- Key Laboratory of Soil Environment Protection of Sichuan Province, Sichuan Agricultural University, Chengdu, 611130, China
| | - Zhanbiao Yang
- School of Environment Sciences, Sichuan Agricultural University, Chengdu, 611130, China
| | - Junren Xian
- School of Environment Sciences, Sichuan Agricultural University, Chengdu, 611130, China
| | - Yuanxiang Yang
- School of Environment Sciences, Sichuan Agricultural University, Chengdu, 611130, China
| | - Wei Zhou
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, China
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13
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Lei R, Li Y, Cai Y, Li C, Pu M, Lu C, Yang Y, Liang G. bHLH121 Functions as a Direct Link that Facilitates the Activation of FIT by bHLH IVc Transcription Factors for Maintaining Fe Homeostasis in Arabidopsis. MOLECULAR PLANT 2020; 13:634-649. [PMID: 31962167 DOI: 10.1016/j.molp.2020.01.006] [Citation(s) in RCA: 61] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2019] [Revised: 01/06/2020] [Accepted: 01/13/2020] [Indexed: 05/22/2023]
Abstract
Iron (Fe) deficiency is prevalent in plants grown in neutral or alkaline soil. Plants have evolved sophisticated mechanisms that regulate Fe homeostasis, ensuring survival. In Arabidopsis, FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR (FIT) is a crucial regulator of Fe-deficiency response. FIT is activated indirectly by basic helix-loop-helix (bHLH) IVc transcription factors (TFs) under Fe deficiency; however, it remains unclear which protein(s) act as the linker to mediate the activation of FIT by bHLH IVc TFs. In this study, we characterize the functions of bHLH121 and demonstrate that it directly associates with the FIT promoter. We found that loss-of-function mutations of bHLH121 cause severe Fe-deficiency symptoms, reduced Fe accumulation, and disrupted expression of genes associated with Fe homeostasis. Genetic analysis showed that FIT is epistatic to bHLH121 and FIT overexpression partially rescues the bhlh121 mutant. Further investigations revealed that bHLH IVc TFs interact with and promote nuclear accumulation of bHLH121. We demonstrated that bHLH121 has DNA-binding activity and can bind the promoters of the FIT and bHLH Ib genes, but we did not find that it has either direct transcriptional activation or repression activity toward these genes. Meanwhile, we found that bHLH121 functions downstream of and is a direct target of bHLH IVc TFs, and its expression is induced by Fe deficiency in a bHLH IVc-dependent manner. Taken together, these results establish that bHLH121 functions together with bHLH IVc TFs to positively regulate the expression of FIT and thus plays a pivotal role in maintaining Fe homeostasis in Arabidopsis.
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Affiliation(s)
- Rihua Lei
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Menglun, Mengla, Yunnan 666303, China
| | - Yang Li
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Menglun, Mengla, Yunnan 666303, China
| | - Yuerong Cai
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Chenyang Li
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Mengna Pu
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Chengkai Lu
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Menglun, Mengla, Yunnan 666303, China
| | - Yujie Yang
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; University of Chinese Academy of Sciences, Beijing 100049, China
| | - Gang Liang
- CAS Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming, Yunnan 650223, China; Center of Economic Botany, Core Botanical Gardens, Chinese Academy of Sciences, Menglun, Mengla, Yunnan 666303, China.
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14
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Zhou C, Ge N, Guo J, Zhu L, Ma Z, Cheng S, Wang J. Enterobacter asburiae Reduces Cadmium Toxicity in Maize Plants by Repressing Iron Uptake-Associated Pathways. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019; 67:10126-10136. [PMID: 31433635 DOI: 10.1021/acs.jafc.9b03293] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Soil microbes have recently been utilized to improve cadmium (Cd) tolerance and lower its accumulation in plants. Nevertheless, whether rhizobacteria can prevent Cd uptake by graminaceous plants and the underlying mechanisms remain elusive. In this study, inoculation with Enterobacter asburiae NC16 reduced transpiration rates and the expression of some iron (Fe) uptake-related genes including ZmFer, ZmYS1, ZmZIP, and ZmNAS2 in maize (Zea mays) plants, which contributed to mitigation of Cd toxicity. However, the inoculation with NC16 failed to suppress the transpiration rates and transcription of these Fe uptake-related genes in plants treated with fluridone, an abscisic acid (ABA) biosynthetic inhibitor, indicating that the impacts of NC16-inoculation observed were dependent on the actions of ABA. We found that NC16 increased the host ABA levels by mediating the metabolism of ABA rather than its synthesis. Moreover, the capacity of NC16 to inhibit plant uptake of Cd was greatly weakened in plants overexpressing ZmZIP, encoding a zinc/iron transporter. Collectively, our findings indicated that E. asburiae NC16 reduced Cd toxicity in maize plants at least partially by hampering the Fe uptake-associated pathways.
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Affiliation(s)
- Cheng Zhou
- Key Lab of Bio-Organic Fertilizer Creation, Ministry of Agriculture , Anhui Science and Technology University , Bengbu 233100 , China
- Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers , Nanjing Agricultural University , Nanjing 210095 , China
| | - Ninggao Ge
- Key Lab of Bio-Organic Fertilizer Creation, Ministry of Agriculture , Anhui Science and Technology University , Bengbu 233100 , China
| | - Jiansheng Guo
- School of Medicine , Zhejiang University , Hangzhou 310058 , China
| | - Lin Zhu
- Key Lab of Bio-Organic Fertilizer Creation, Ministry of Agriculture , Anhui Science and Technology University , Bengbu 233100 , China
| | - Zhongyou Ma
- Key Lab of Bio-Organic Fertilizer Creation, Ministry of Agriculture , Anhui Science and Technology University , Bengbu 233100 , China
| | - Shiyong Cheng
- Key Lab of Bio-Organic Fertilizer Creation, Ministry of Agriculture , Anhui Science and Technology University , Bengbu 233100 , China
| | - Jianfei Wang
- Key Lab of Bio-Organic Fertilizer Creation, Ministry of Agriculture , Anhui Science and Technology University , Bengbu 233100 , China
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15
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Mendoza-Cózatl DG, Gokul A, Carelse MF, Jobe TO, Long TA, Keyster M. Keep talking: crosstalk between iron and sulfur networks fine-tunes growth and development to promote survival under iron limitation. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4197-4210. [PMID: 31231775 DOI: 10.1093/jxb/erz290] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2019] [Accepted: 06/08/2019] [Indexed: 05/21/2023]
Abstract
Plants are capable of synthesizing all the molecules necessary to complete their life cycle from minerals, water, and light. This plasticity, however, comes at a high energetic cost and therefore plants need to regulate their economy and allocate resources accordingly. Iron-sulfur (Fe-S) clusters are at the center of photosynthesis, respiration, amino acid, and DNA metabolism. Fe-S clusters are extraordinary catalysts, but their main components (Fe2+ and S2-) are highly reactive and potentially toxic. To prevent toxicity, plants have evolved mechanisms to regulate the uptake, storage, and assimilation of Fe and S. Recent advances have been made in understanding the cellular economy of Fe and S metabolism individually, and growing evidence suggests that there is dynamic crosstalk between Fe and S networks. In this review, we summarize and discuss recent literature on Fe sensing, allocation, use efficiency, and, when pertinent, its relationship to S metabolism. Our future perspectives include a discussion about the open questions and challenges ahead and how the plant nutrition field can come together to approach these questions in a cohesive and more efficient way.
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Affiliation(s)
- David G Mendoza-Cózatl
- Division of Plant Sciences, C.S. Bond Life Sciences Center, University of Missouri, Columbia, MO, USA
| | - Arun Gokul
- Environmental Biotechnology Laboratory, Department of Biotechnology, University of the Western Cape, Bellville, South Africa
| | - Mogamat F Carelse
- Environmental Biotechnology Laboratory, Department of Biotechnology, University of the Western Cape, Bellville, South Africa
| | - Timothy O Jobe
- Botanical Institute and Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany
| | - Terri A Long
- Plant and Microbial Biology, North Carolina State University, Raleigh, NC, USA
| | - Marshall Keyster
- Environmental Biotechnology Laboratory, Department of Biotechnology, University of the Western Cape, Bellville, South Africa
- DST-NRF Centre of Excellence in Food Security, University of the Western Cape, Bellville, South Africa
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16
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Bègue H, Mounier A, Rosnoblet C, Wendehenne D. Toward the understanding of the role of CDC48, a major component of the protein quality control, in plant immunity. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2019; 279:34-44. [PMID: 30709491 DOI: 10.1016/j.plantsci.2018.10.029] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Revised: 10/29/2018] [Accepted: 10/31/2018] [Indexed: 06/09/2023]
Abstract
The evolutionally conserved chaperone-like protein CDC48 (cell division cycle 48) is a major component of ubiquitin-dependent protein degradation pathways in animal and yeast and, more generally, of the protein quality control machinery. In plants, CDC48 plays essential regulatory functions in development and the possibly that it contributes to protein degradation through the ubiquitin-proteasome system (UPS) and the endoplasmic reticulum-associated protein degradation (ERAD) system has been reported. In this review we described recent findings highlighting a role for CDC48 in plant immunity. First data indicated that CDC48 is S-nitrosylated in plant cells undergoing an immune response, regulates the turnover of immune receptors and mediates the degradation of viral proteins. Furthermore its overexpression was associated to an exacerbated hypersensitive-like cell death. We also designed and reported here the first CDC48 interactome. The corresponding data confirm the closed interaction of CDC48 with components of the UPS and shed light on its putative regulatory function of S-adenosyl-methionine synthesis and metabolism. More generally, these investigations further support the concept that plant cells facing pathogen attack finely regulate the protein quality control machinery.
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Affiliation(s)
- Hervé Bègue
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France.
| | - Arnaud Mounier
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - Claire Rosnoblet
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France
| | - David Wendehenne
- Agroécologie, AgroSup Dijon, CNRS, INRA, Univ. Bourgogne, Univ. Bourgogne Franche-Comté, F-21000, Dijon, France.
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17
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Yu R, Ma Y, Li Y, Li X, Liu C, Du X, Shi G. Comparative transcriptome analysis revealed key factors for differential cadmium transport and retention in roots of two contrasting peanut cultivars. BMC Genomics 2018; 19:938. [PMID: 30558537 PMCID: PMC6296094 DOI: 10.1186/s12864-018-5304-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2018] [Accepted: 11/23/2018] [Indexed: 12/14/2022] Open
Abstract
BACKGROUND Peanut is the world's fourth largest oilseed crop that exhibits wide cultivar variations in cadmium (Cd) accumulation. To establish the mechanisms of Cd distribution and accumulation in peanut plants, eight cDNA libraries from the roots of two contrasting cultivars, Fenghua 1 (low-Cd cultivar) and Silihong (high-Cd cultivar), were constructed and sequenced by RNA-sequencing. The expression patterns of 16 candidate DEGs were validated by RT-qPCR analysis. RESULTS A total of 75,634 genes including 71,349 known genes and 4484 novel genes were identified in eight cDNA libraries, among which 6798 genes were found to be Cd-responsive DEGs and/or DEGs between these two cultivars. Interestingly, 183 DEGs encoding ion transport related proteins and 260 DEGs encoding cell wall related proteins were identified. Among these DEGs, nine metal transporter genes (PDR1, ABCC4 and ABCC15, IRT1, ZIP1, ZIP11, YSL7, DTX43 and MTP4) and nine cell wall related genes (PEs, PGIPs, GTs, XYT12 CYP450s, LACs, 4CL2, C4H and CASP5) showed higher expression in Fenghua 1 than in Silihong. CONCLUSIONS Both the metal transporters and cell wall modification might be responsible for the difference in Cd accumulation and translocation between Fenghua 1 and Silihong. These findings would be useful for further functional analysis, and reveal the molecular mechanism responsible for genotype difference in Cd accumulation.
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Affiliation(s)
- Rugang Yu
- College of Life Sciences, Huaibei Normal University, Huaibei, Anhui, 235000, People's Republic of China
| | - Yuanyuan Ma
- College of Life Sciences, Huaibei Normal University, Huaibei, Anhui, 235000, People's Republic of China
| | - Yue Li
- College of Life Sciences, Huaibei Normal University, Huaibei, Anhui, 235000, People's Republic of China
| | - Xin Li
- College of Life Sciences, Huaibei Normal University, Huaibei, Anhui, 235000, People's Republic of China
| | - Caifeng Liu
- College of Life Sciences, Huaibei Normal University, Huaibei, Anhui, 235000, People's Republic of China
| | - Xueling Du
- College of Life Sciences, Huaibei Normal University, Huaibei, Anhui, 235000, People's Republic of China
| | - Gangrong Shi
- College of Life Sciences, Huaibei Normal University, Huaibei, Anhui, 235000, People's Republic of China.
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18
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Aprile A, Sabella E, Vergine M, Genga A, Siciliano M, Nutricati E, Rampino P, De Pascali M, Luvisi A, Miceli A, Negro C, De Bellis L. Activation of a gene network in durum wheat roots exposed to cadmium. BMC PLANT BIOLOGY 2018; 18:238. [PMID: 30326849 PMCID: PMC6192290 DOI: 10.1186/s12870-018-1473-4] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2018] [Accepted: 10/05/2018] [Indexed: 05/04/2023]
Abstract
BACKGROUND Among cereals, durum wheat (Triticum turgidum L. subsp. durum) accumulates cadmium (Cd) at higher concentration if grown in Cd-polluted soils. Since cadmium accumulation is a risk for human health, the international trade organizations have limited the acceptable concentration of Cd in edible crops. Therefore, durum wheat cultivars accumulating low cadmium in grains should be preferred by farmers and consumers. To identify the response of durum wheat to the presence of Cd, the transcriptomes of roots and shoots of Creso and Svevo cultivars were sequenced after a 50-day exposure to 0.5 μM Cd in hydroponic solution. RESULTS No phytotoxic effects or biomass reduction was observed in Creso and Svevo plants at this Cd concentration. Despite this null effect, cadmium was accumulated in root tissues, in shoots and in grains suggesting a good cadmium translocation rate among tissues. The mRNA sequencing revealed a general transcriptome rearrangement after Cd treatment and more than 7000 genes were found differentially expressed in root and shoot tissues. Among these, the up-regulated genes in roots showed a clear correlation with cadmium uptake and detoxification. In particular, about three hundred genes were commonly up-regulated in Creso and Svevo roots suggesting a well defined molecular strategy characterized by the transcriptomic activation of several transcription factors mainly belonging to bHLH and WRKY families. bHLHs are probably the activators of the strong up-regulation of three NAS genes, responsible for the synthesis of the phytosiderophore nicotianamine (NA). Moreover, we found the overall up-regulation of the methionine salvage pathway that is tightly connected with NA synthesis and supply the S-adenosyl methionine necessary for NA biosynthesis. Finally, several vacuolar NA chelating heavy metal transporters were vigorously activated. CONCLUSIONS In conclusion, the exposure of durum wheat to cadmium activates in roots a complex gene network involved in cadmium translocation and detoxification from heavy metals. These findings are confident with a role of nicotianamine and methionine salvage pathway in the accumulation of cadmium in durum wheat.
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Affiliation(s)
- Alessio Aprile
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Erika Sabella
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Marzia Vergine
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Alessandra Genga
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Maria Siciliano
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Eliana Nutricati
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Patrizia Rampino
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Mariarosaria De Pascali
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Andrea Luvisi
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Antonio Miceli
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Carmine Negro
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
| | - Luigi De Bellis
- Department of Biological and Environmental Sciences and Technologies, University of Salento, via Prov.le Monteroni 165, 73100 Lecce, Italy
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19
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Yao X, Cai Y, Yu D, Liang G. bHLH104 confers tolerance to cadmium stress in Arabidopsis thaliana. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2018; 60:691-702. [PMID: 29667322 DOI: 10.1111/jipb.12658] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2018] [Accepted: 04/16/2018] [Indexed: 06/08/2023]
Abstract
Cd is a non-essential heavy metal that is toxic to both plants and animals. Here, we reveal that the transcription factor bHLH104 positively regulates Cd tolerance in Arabidopsis thaliana. We show that Fe deficiency-responsive genes were induced by Cd treatment, and that their upregulation was suppressed in bhlh104 loss-of-function mutants, but enhanced upon overexpression of bHLH104. Correspondingly, the bhlh104 mutants displayed sensitivity to Cd stress, whereas plants overexpressing bHLH104 exhibited enhanced Cd tolerance. Further analysis suggested that bHLH104 positively regulates four heavy metal detoxification-associated genes, IREG2, MTP3, HMA3 and NAS4, which play roles in Cd sequestration and tolerance. The bHLH104 overexpression plants accumulated high levels of Cd in the root but low levels of Cd in the shoot, which might contribute to the Cd tolerance in those lines. The present study thus points to bHLH104 as a potentially useful tool for genetic engineering of plants with enhanced Cd tolerance.
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Affiliation(s)
- Xiani Yao
- Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming 650223, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Yuerong Cai
- Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming 650223, China
- University of Chinese Academy of Sciences, Beijing 100049, China
| | - Diqiu Yu
- Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming 650223, China
| | - Gang Liang
- Key Laboratory of Tropical Plant Resources and Sustainable Use, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Kunming 650223, China
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Trevisan S, Manoli A, Ravazzolo L, Franceschi C, Quaggiotti S. mRNA-Sequencing Analysis Reveals Transcriptional Changes in Root of Maize Seedlings Treated with Two Increasing Concentrations of a New Biostimulant. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2017; 65:9956-9969. [PMID: 29064699 DOI: 10.1021/acs.jafc.7b03069] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Biostimulants are a wide range of natural or synthetic products containing substances and/or microorganisms that can stimulate plant processes to improve nutrient uptake, nutrient efficiency, tolerance to abiotic stress, and crop quality ( http://www.biostimulants.eu/ , accessed September 27, 2017). The use of biostimulants is proposed as an advanced solution to face the demand for sustainable agriculture by ensuring optimal crop performances and better resilience to environment changes. The proposed approach is to predict and characterize the function of natural compounds as biostimulants. In this research, plant growth assessments and transcriptomic approaches are combined to investigate and understand the specific mode(s) of action of APR, a new product provided by the ILSA group (Arzignano, Vicenza). Maize seedlings (B73) were kept in a climatic chamber and grown in a solid medium to test the effects of two different combinations of the protein hydrolysate APR (A1 and A1/2). Data on root growth evidenced a significant enhancement of the dry weight of both roots and root/shoot ratio in response to APR. Transcriptomic profiles of lateral roots of maize seedlings treated with two increasing concentrations of APR were studied by mRNA-sequencing analysis (RNA-seq). Pairwise comparisons of the RNA-seq data identified a total of 1006 differentially expressed genes between treated and control plants. The two APR concentrations were demonstrated to affect the expression of genes involved in both common and specific pathways. On the basis of the putative function of the isolated differentially expressed genes, APR has been proposed to enhance plant response to adverse environmental conditions.
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Affiliation(s)
- Sara Trevisan
- Department of Agriculture, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padua , Agripolis, Viale dell'Università, 16, 35020 Legnaro, PD, Italy
| | - Alessandro Manoli
- Department of Agriculture, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padua , Agripolis, Viale dell'Università, 16, 35020 Legnaro, PD, Italy
| | - Laura Ravazzolo
- Department of Agriculture, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padua , Agripolis, Viale dell'Università, 16, 35020 Legnaro, PD, Italy
| | | | - Silvia Quaggiotti
- Department of Agriculture, Food, Natural Resources, Animals and Environment (DAFNAE), University of Padua , Agripolis, Viale dell'Università, 16, 35020 Legnaro, PD, Italy
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21
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The Arabidopsis defensin gene, AtPDF1.1, mediates defence against Pectobacterium carotovorum subsp. carotovorum via an iron-withholding defence system. Sci Rep 2017; 7:9175. [PMID: 28835670 PMCID: PMC5569111 DOI: 10.1038/s41598-017-08497-7] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2017] [Accepted: 07/10/2017] [Indexed: 12/05/2022] Open
Abstract
Plant defensins (PDFs) are cysteine-rich peptides that have a range of biological functions, including defence against fungal pathogens. However, little is known about their role in defence against bacteria. In this study, we showed that the protein encoded by ARABIDOPSIS THALIANA PLANT DEFENSIN TYPE 1.1 (AtPDF1.1) is a secreted protein that can chelate apoplastic iron. Transcripts of AtPDF1.1 were induced in both systemic non-infected leaves of Arabidopsis thaliana plants and those infected with the necrotrophic bacterium Pectobacterium carotovorum subsp. carotovorum (Pcc). The expression levels of AtPDF1.1 with correct subcellular localization in transgenic A. thaliana plants were positively correlated with tolerance to Pcc, suggesting its involvement in the defence against this bacterium. Expression analysis of genes associated with iron homeostasis/deficiency and hormone signalling indicated that the increased sequestration of iron by apoplastic AtPDF1.1 overexpression perturbs iron homeostasis in leaves and consequently activates an iron-deficiency-mediated response in roots via the ethylene signalling pathway. This in turn triggers ethylene-mediated signalling in systemic leaves, which is involved in suppressing the infection of necrotrophic pathogens. These findings provide new insight into the key functions of plant defensins in limiting the infection by the necrotrophic bacterium Pcc via an iron-deficiency-mediated defence response.
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Verbon EH, Trapet PL, Stringlis IA, Kruijs S, Bakker PAHM, Pieterse CMJ. Iron and Immunity. ANNUAL REVIEW OF PHYTOPATHOLOGY 2017; 55:355-375. [PMID: 28598721 DOI: 10.1146/annurev-phyto-080516-035537] [Citation(s) in RCA: 133] [Impact Index Per Article: 19.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
Iron is an essential nutrient for most life on Earth because it functions as a crucial redox catalyst in many cellular processes. However, when present in excess iron can lead to the formation of harmful hydroxyl radicals. Hence, the cellular iron balance must be tightly controlled. Perturbation of iron homeostasis is a major strategy in host-pathogen interactions. Plants use iron-withholding strategies to reduce pathogen virulence or to locally increase iron levels to activate a toxic oxidative burst. Some plant pathogens counteract such defenses by secreting iron-scavenging siderophores that promote iron uptake and alleviate iron-regulated host immune responses. Mutualistic root microbiota can also influence plant disease via iron. They compete for iron with soil-borne pathogens or induce a systemic resistance that shares early signaling components with the root iron-uptake machinery. This review describes the progress in our understanding of the role of iron homeostasis in both pathogenic and beneficial plant-microbe interactions.
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Affiliation(s)
- Eline H Verbon
- Plant-Microbe Interactions, Institute of Environmental Biology, Department of Biology, Faculty of Science, Utrecht University, 3508 TB Utrecht, The Netherlands;
| | - Pauline L Trapet
- Plant-Microbe Interactions, Institute of Environmental Biology, Department of Biology, Faculty of Science, Utrecht University, 3508 TB Utrecht, The Netherlands;
| | - Ioannis A Stringlis
- Plant-Microbe Interactions, Institute of Environmental Biology, Department of Biology, Faculty of Science, Utrecht University, 3508 TB Utrecht, The Netherlands;
| | - Sophie Kruijs
- Plant-Microbe Interactions, Institute of Environmental Biology, Department of Biology, Faculty of Science, Utrecht University, 3508 TB Utrecht, The Netherlands;
| | - Peter A H M Bakker
- Plant-Microbe Interactions, Institute of Environmental Biology, Department of Biology, Faculty of Science, Utrecht University, 3508 TB Utrecht, The Netherlands;
| | - Corné M J Pieterse
- Plant-Microbe Interactions, Institute of Environmental Biology, Department of Biology, Faculty of Science, Utrecht University, 3508 TB Utrecht, The Netherlands;
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23
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Shukla D, Rinehart CA, Sahi SV. Comprehensive study of excess phosphate response reveals ethylene mediated signaling that negatively regulates plant growth and development. Sci Rep 2017; 7:3074. [PMID: 28596610 PMCID: PMC5465178 DOI: 10.1038/s41598-017-03061-9] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2017] [Accepted: 04/21/2017] [Indexed: 12/19/2022] Open
Abstract
Excess Phosphorus (P) in agriculture is causing serious environmental problems like eutrophication of lakes and rivers. Unlike the enormous information available for phosphate starvation response (P0), very few information is available for the effect of excess phosphate Pi on plants. Characterization of Excess Phosphate Response (EPiR) is essential for designing strategies to increase phosphate accumulation and tolerance. We show a significant modulation in the root developmental plasticity under the increasing supply of excess Pi. An excess supply of 20 mM Pi (P20) produces a shallow root system architecture (RSA), reduces primary root growth, root apical meristem size, and meristematic activity in Arabidopsis. The inhibition of primary root growth and development is indeterminate in nature and caused by the decrease in number of meristematic cortical cells due to EPiR. Significant changes occurred in metal nutrients level due to excess Pi supply. A comparative microarray investigation of the EPiR response reveals a modulation in ethylene biosynthesis and signaling, metal ions deficiency response, and root development related genes. We used ethylene-insensitive or sensitive mutants to provide more evidence for ethylene-mediated signaling. A new role of EPiR in regulating the developmental responses of plants mediated by ethylene has been demonstrated.
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Affiliation(s)
- Devesh Shukla
- Department of Biology, 1906 College Heights, Western Kentucky University, Bowling Green, 42101-1080, Kentucky, USA.
| | - Claire A Rinehart
- Department of Biology, 1906 College Heights, Western Kentucky University, Bowling Green, 42101-1080, Kentucky, USA
| | - Shivendra V Sahi
- Department of Biology, 1906 College Heights, Western Kentucky University, Bowling Green, 42101-1080, Kentucky, USA.
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24
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Li W, Lan P. The Understanding of the Plant Iron Deficiency Responses in Strategy I Plants and the Role of Ethylene in This Process by Omic Approaches. FRONTIERS IN PLANT SCIENCE 2017; 8:40. [PMID: 28174585 PMCID: PMC5259694 DOI: 10.3389/fpls.2017.00040] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2016] [Accepted: 01/09/2017] [Indexed: 05/19/2023]
Abstract
Iron (Fe) is an essential plant micronutrient but is toxic in excess. Fe deficiency chlorosis is a major constraint for plant growth and causes severe losses of crop yields and quality. Under Fe deficiency conditions, plants have developed sophisticated mechanisms to keep cellular Fe homeostasis via various physiological, morphological, metabolic, and gene expression changes to facilitate the availability of Fe. Ethylene has been found to be involved in the Fe deficiency responses of plants through pharmacological studies or by the use of ethylene mutants. However, how ethylene is involved in the regulations of Fe starvation responses remains not fully understood. Over the past decade, omics approaches, mainly focusing on the RNA and protein levels, have been used extensively to investigate global gene expression changes under Fe-limiting conditions, and thousands of genes have been found to be regulated by Fe status. Similarly, proteome profiles have uncovered several hallmark processes that help plants adapt to Fe shortage. To find out how ethylene participates in the Fe deficiency response and explore putatively novel regulators for further investigation, this review emphasizes the integration of those genes and proteins, derived from omics approaches, regulated both by Fe deficiency, and ethylene into a systemic network by gene co-expression analysis.
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Affiliation(s)
- Wenfeng Li
- Collaborative Innovation Center of Sustainable Forestry in Southern China of Jiangsu Province, College of Biology and the Environment, Nanjing Forestry UniversityNanjing, China
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of SciencesNanjing, China
| | - Ping Lan
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of SciencesNanjing, China
- *Correspondence: Ping Lan
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25
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Leaden L, Pagani MA, Balparda M, Busi MV, Gomez-Casati DF. Altered levels of AtHSCB disrupts iron translocation from roots to shoots. PLANT MOLECULAR BIOLOGY 2016; 92:613-628. [PMID: 27655366 DOI: 10.1007/s11103-016-0537-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2015] [Accepted: 08/29/2016] [Indexed: 05/26/2023]
Abstract
Plants overexpressing AtHSCB and hscb knockdown mutants showed altered iron homeostasis. The overexpression of AtHSCB led to activation of the iron uptake system and iron accumulation in roots without concomitant transport to shoots, resulting in reduced iron content in the aerial parts of plants. By contrast, hscb knockdown mutants presented the opposite phenotype, with iron accumulation in shoots despite the reduced levels of iron uptake in roots. AtHSCB play a key role in iron metabolism, probably taking part in the control of iron translocation from roots to shoots. Many aspects of plant iron metabolism remain obscure. The most known and studied homeostatic mechanism is the control of iron uptake in the roots by shoots. Nevertheless, this mechanism likely involves various unknown sensors and unidentified signals sent from one tissue to another which need to be identified. Here, we characterized Arabidopsis thaliana plants overexpressing AtHSCB, encoding a mitochondrial cochaperone involved in [Fe-S] cluster biosynthesis, and hscb knockdown mutants, which exhibit altered shoot/root Fe partitioning. Overexpression of AtHSCB induced an increase in root iron uptake and content along with iron deficiency in shoots. Conversely, hscb knockdown mutants exhibited increased iron accumulation in shoots and reduced iron uptake in roots. Different experiments, including foliar iron application, citrate supplementation and iron deficiency treatment, indicate that the shoot-directed control of iron uptake in roots functions properly in these lines, implying that [Fe-S] clusters are not involved in this regulatory mechanism. The most likely explanation is that both lines have altered Fe transport from roots to shoots. This could be consistent with a defect in a homeostatic mechanism operating at the root-to-shoot translocation level, which would be independent of the shoot control over root iron deficiency responses. In summary, the phenotypes of these plants indicate that AtHSCB plays a role in iron metabolism.
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Affiliation(s)
- Laura Leaden
- Centro de Estudios Fotosintéticos y Bioquímicos (CEFOBI), CONICET-Universidad Nacional de Rosario, Suipacha 531, 2000, Rosario, Argentina
- Departamento de Microbiologia, Instituto de Ciências Biomédicas, Universidade de São Paulo, Av. Prof. Lineu Prestes 1374, São Paulo, 05508-900, Brazil
| | - María A Pagani
- Centro de Estudios Fotosintéticos y Bioquímicos (CEFOBI), CONICET-Universidad Nacional de Rosario, Suipacha 531, 2000, Rosario, Argentina.
| | - Manuel Balparda
- Centro de Estudios Fotosintéticos y Bioquímicos (CEFOBI), CONICET-Universidad Nacional de Rosario, Suipacha 531, 2000, Rosario, Argentina
| | - María V Busi
- Centro de Estudios Fotosintéticos y Bioquímicos (CEFOBI), CONICET-Universidad Nacional de Rosario, Suipacha 531, 2000, Rosario, Argentina
| | - Diego F Gomez-Casati
- Centro de Estudios Fotosintéticos y Bioquímicos (CEFOBI), CONICET-Universidad Nacional de Rosario, Suipacha 531, 2000, Rosario, Argentina.
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26
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Yue R, Lu C, Qi J, Han X, Yan S, Guo S, Liu L, Fu X, Chen N, Yin H, Chi H, Tie S. Transcriptome Analysis of Cadmium-Treated Roots in Maize (Zea mays L.). FRONTIERS IN PLANT SCIENCE 2016; 7:1298. [PMID: 27630647 PMCID: PMC5006096 DOI: 10.3389/fpls.2016.01298] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2016] [Accepted: 08/15/2016] [Indexed: 05/05/2023]
Abstract
Cadmium (Cd) is a heavy metal and is highly toxic to all plant species. However, the underlying molecular mechanism controlling the effects of auxin on the Cd stress response in maize is largely unknown. In this study, the transcriptome produced by maize 'Zheng 58' root responses to Cd stress was sequenced using Illumina sequencing technology. In our study, six RNA-seq libraries yielded a total of 244 million clean short reads and 30.37 Gb of sequence data. A total of 6342 differentially expressed genes (DEGs) were grouped into 908 Gene Ontology (GO) categories and 198 Kyoto Encyclopedia of Genes and Genomes terms. GO term enrichment analysis indicated that various auxin signaling pathway-related GO terms were significantly enriched in DEGs. Comparison of the transcript abundances for auxin biosynthesis, transport, and downstream response genes revealed a universal expression response under Cd treatment. Furthermore, our data showed that free indole-3-acetic acid (IAA) levels were significantly reduced; but IAA oxidase activity was up-regulated after Cd treatment in maize roots. The analysis of Cd activity in maize roots under different Cd and auxin conditions confirmed that auxin affected Cd accumulation in maize seedlings. These results will improve our understanding of the complex molecular mechanisms underlying the response to Cd stress in maize roots.
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Affiliation(s)
- Runqing Yue
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Caixia Lu
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Jianshuang Qi
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Xiaohua Han
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Shufeng Yan
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Shulei Guo
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Lu Liu
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Xiaolei Fu
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Nana Chen
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Haiyan Yin
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Haifeng Chi
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
| | - Shuanggui Tie
- Food Crops Research Institute, Henan Academy of Agricultural SciencesZhengzhou, China
- The Henan Provincial Key Laboratory of Maize BiologyZhengzhou, China
- *Correspondence: Shuanggui Tie,
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27
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Shanmugam V, Wang YW, Tsednee M, Karunakaran K, Yeh KC. Glutathione plays an essential role in nitric oxide-mediated iron-deficiency signaling and iron-deficiency tolerance in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2015; 84:464-77. [PMID: 26333047 DOI: 10.1111/tpj.13011] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2015] [Revised: 08/17/2015] [Accepted: 08/25/2015] [Indexed: 05/18/2023]
Abstract
Iron (Fe) deficiency is a common agricultural problem that affects both the productivity and nutritional quality of plants. Thus, identifying the key factors involved in the tolerance of Fe deficiency is important. In the present study, the zir1 mutant, which is glutathione deficient, was found to be more sensitive to Fe deficiency than the wild type, and grew poorly in alkaline soil. Other glutathione-deficient mutants also showed various degrees of sensitivity to Fe-limited conditions. Interestingly, we found that the glutathione level was increased under Fe deficiency in the wild type. By contrast, blocking glutathione biosynthesis led to increased physiological sensitivity to Fe deficiency. On the other hand, overexpressing glutathione enhanced the tolerance to Fe deficiency. Under Fe-limited conditions, glutathione-deficient mutants, zir1, pad2 and cad2 accumulated lower levels of Fe than the wild type. The key genes involved in Fe uptake, including IRT1, FRO2 and FIT, are expressed at low levels in zir1; however, a split-root experiment suggested that the systemic signals that govern the expression of Fe uptake-related genes are still active in zir1. Furthermore, we found that zir1 had a lower accumulation of nitric oxide (NO) and NO reservoir S-nitrosoglutathione (GSNO). Although NO is a signaling molecule involved in the induction of Fe uptake-related genes during Fe deficiency, the NO-mediated induction of Fe-uptake genes is dependent on glutathione supply in the zir1 mutant. These results provide direct evidence that glutathione plays an essential role in Fe-deficiency tolerance and NO-mediated Fe-deficiency signaling in Arabidopsis.
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Affiliation(s)
| | - Yi-Wen Wang
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan
| | - Munkhtsetseg Tsednee
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan
| | - Krithika Karunakaran
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan
| | - Kuo-Chen Yeh
- Agricultural Biotechnology Research Center, Academia Sinica, Taipei, 11529, Taiwan
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28
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Isaure MP, Huguet S, Meyer CL, Castillo-Michel H, Testemale D, Vantelon D, Saumitou-Laprade P, Verbruggen N, Sarret G. Evidence of various mechanisms of Cd sequestration in the hyperaccumulator Arabidopsis halleri, the non-accumulator Arabidopsis lyrata, and their progenies by combined synchrotron-based techniques. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:3201-14. [PMID: 25873676 DOI: 10.1093/jxb/erv131] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
Arabidopsis halleri is a model plant for Zn and Cd hyperaccumulation. The objective of this study was to determine the relationship between the chemical forms of Cd, its distribution in leaves, and Cd accumulation and tolerance. An interspecific cross was carried out between A. halleri and the non-tolerant and non-hyperaccumulating relative A. lyrata providing progenies segregating for Cd tolerance and accumulation. Cd speciation and distribution were investigated using X-ray absorption spectroscopy and microfocused X-ray fluorescence. In A. lyrata and non-tolerant progenies, Cd was coordinated by S atoms only or with a small contribution of O groups. Interestingly, the proportion of O ligands increased in A. halleri and tolerant progenies, and they were predominant in most of them, while S ligands were still present. Therefore, the binding of Cd with O ligands was associated with Cd tolerance. In A. halleri, Cd was mainly located in the xylem, phloem, and mesophyll tissue, suggesting a reallocation process for Cd within the plant. The distribution of the metal at the cell level was further discussed. In A. lyrata, the vascular bundles were also Cd enriched, but the epidermis was richer in Cd as compared with the mesophyll. Cd was identified in trichomes of both species. This work demonstrated that both Cd speciation and localization were related to the tolerance character of the plant.
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Affiliation(s)
- Marie-Pierre Isaure
- Laboratoire de Chimie Analytique Bio-Inorganique et Environnement, Institut des sciences analytiques et de physico-chimie pour l'environnement et les matériaux (LCABIE/IPREM-UMR 5254), Université de Pau et des Pays de l'Adour and CNRS, Hélioparc, 2 Av. Pierre Angot, 64053 PAU Cedex 9, France
| | - Stéphanie Huguet
- Laboratoire de Chimie Analytique Bio-Inorganique et Environnement, Institut des sciences analytiques et de physico-chimie pour l'environnement et les matériaux (LCABIE/IPREM-UMR 5254), Université de Pau et des Pays de l'Adour and CNRS, Hélioparc, 2 Av. Pierre Angot, 64053 PAU Cedex 9, France
| | - Claire-Lise Meyer
- Laboratoire de Physiologie et de Génétique Moléculaire des Plantes (LPGMP), Université Libre de Bruxelles, Campus Plaine-ULB, CP 242, Bd du Triomphe, B-1050 Brussels, Belgium
| | - Hiram Castillo-Michel
- European Synchrotron Radiation Facility (ESRF), ID21 Beamline, BP 220, 38043 Grenoble, France
| | - Denis Testemale
- Université Grenoble Alpes, Institut Néel, 38000 Grenoble, France CNRS, Institut Néel, 38042 Grenoble France
| | - Delphine Vantelon
- SOLEIL Synchrotron, LUCIA Beamline, BP48, 91192 Gif sur Yvette, France
| | - Pierre Saumitou-Laprade
- Laboratoire de Génétique et Evolution des Populations Végétales (GEPV-UMR 8198), Université des Sciences et Technologies de Lille and CNRS- Lille 1, 59655 Villeneuve d'Ascq Cedex, France
| | - Nathalie Verbruggen
- Laboratoire de Physiologie et de Génétique Moléculaire des Plantes (LPGMP), Université Libre de Bruxelles, Campus Plaine-ULB, CP 242, Bd du Triomphe, B-1050 Brussels, Belgium
| | - Géraldine Sarret
- Institut des Sciences de la Terre (ISTerre), Université Joseph Fourier and CNRS, BP 53, 38041 Grenoble Cedex 9, France
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29
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Koen E, Trapet P, Brulé D, Kulik A, Klinguer A, Atauri-Miranda L, Meunier-Prest R, Boni G, Glauser G, Mauch-Mani B, Wendehenne D, Besson-Bard A. β-Aminobutyric acid (BABA)-induced resistance in Arabidopsis thaliana: link with iron homeostasis. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2014; 27:1226-40. [PMID: 25025782 DOI: 10.1094/mpmi-05-14-0142-r] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
β-Aminobutyric acid (BABA) is a nonprotein amino acid inducing resistance in many different plant species against a wide range of abiotic and biotic stresses. Nevertheless, how BABA primes plant natural defense reactions remains poorly understood. Based on its structure, we hypothesized and confirmed that BABA is able to chelate iron (Fe) in vitro. In vivo, we showed that it led to a transient Fe deficiency response in Arabidopsis thaliana plants exemplified by a reduction of ferritin accumulation and disturbances in the expression of genes related to Fe homeostasis. This response was not correlated to changes in Fe concentrations, suggesting that BABA affects the availability or the distribution of Fe rather than its assimilation. The phenotype of BABA-treated plants was similar to those of plants cultivated in Fe-deficient conditions. A metabolomic analysis indicated that both BABA and Fe deficiency induced the accumulation of common metabolites, including p-coumaroylagmatine, a metabolite previously shown to be synthesized in several plant species facing pathogen attack. Finally, we showed that the protective effect induced by BABA against Botrytis cinerea was mimicked by Fe deficiency. In conclusion, the Fe deficiency response caused by BABA could bring the plant to a defense-ready state, participating in the plant resistance against the pathogens.
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30
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Maurer F, Naranjo Arcos MA, Bauer P. Responses of a triple mutant defective in three iron deficiency-induced Basic Helix-Loop-Helix genes of the subgroup Ib(2) to iron deficiency and salicylic acid. PLoS One 2014; 9:e99234. [PMID: 24919188 PMCID: PMC4053374 DOI: 10.1371/journal.pone.0099234] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2014] [Accepted: 05/12/2014] [Indexed: 12/21/2022] Open
Abstract
Plants are sessile organisms that adapt to external stress by inducing molecular and physiological responses that serve to better cope with the adverse growth condition. Upon low supply of the micronutrient iron, plants actively increase the acquisition of soil iron into the root and its mobilization from internal stores. The subgroup Ib(2) BHLH genes function as regulators in this response, however their concrete functions are not fully understood. Here, we analyzed a triple loss of function mutant of BHLH39, BHLH100 and BHLH101 (3xbhlh mutant). We found that this mutant did not have any iron uptake phenotype if iron was provided. However, under iron deficiency the mutant displayed a more severe leaf chlorosis than the wild type. Microarray-based transcriptome analysis revealed that this mutant phenotype resulted in the mis-regulation of 198 genes, out of which only 15% were associated with iron deficiency regulation itself. A detailed analysis revealed potential targets of the bHLH transcription factors as well as genes reflecting an exaggerated iron deficiency response phenotype. Since the BHLH genes of this subgroup have been brought into the context of the plant hormone salicylic acid, we investigated whether the 3xbhlh mutant might have been affected by this plant signaling molecule. Although a very high number of genes responded to SA, also in a differential manner between mutant and wild type, we did not find any indication for an association of the BHLH gene functions in SA responses upon iron deficiency. In summary, our study indicates that the bHLH subgroup Ib(2) transcription factors do not only act in iron acquisition into roots but in other aspects of the adaptation to iron deficiency in roots and leaves.
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Affiliation(s)
- Felix Maurer
- Dept. Biosciences-Plant Biology, Saarland University, Saarbrücken, Germany
| | - Maria Augusta Naranjo Arcos
- Dept. Biosciences-Plant Biology, Saarland University, Saarbrücken, Germany
- Institute of Botany and Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Düsseldorf, Germany
| | - Petra Bauer
- Dept. Biosciences-Plant Biology, Saarland University, Saarbrücken, Germany
- Institute of Botany and Cluster of Excellence on Plant Sciences (CEPLAS), Heinrich Heine University, Düsseldorf, Germany
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Palmer CM, Hindt MN, Schmidt H, Clemens S, Guerinot ML. MYB10 and MYB72 are required for growth under iron-limiting conditions. PLoS Genet 2013; 9:e1003953. [PMID: 24278034 PMCID: PMC3836873 DOI: 10.1371/journal.pgen.1003953] [Citation(s) in RCA: 148] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2012] [Accepted: 09/27/2013] [Indexed: 12/21/2022] Open
Abstract
Iron is essential for photosynthesis and is often a limiting nutrient for plant productivity. Plants respond to conditions of iron deficiency by increasing transcript abundance of key genes involved in iron homeostasis, but only a few regulators of these genes have been identified. Using genome-wide expression analysis, we searched for transcription factors that are induced within 24 hours after transferring plants to iron-deficient growth conditions. Out of nearly 100 transcription factors shown to be up-regulated, we identified MYB10 and MYB72 as the most highly induced transcription factors. Here, we show that MYB10 and MYB72 are functionally redundant and are required for plant survival in alkaline soil where iron availability is greatly restricted. myb10myb72 double mutants fail to induce transcript accumulation of the nicotianamine synthase gene NAS4. Both myb10myb72 mutants and nas4-1 mutants have reduced iron concentrations, chlorophyll levels, and shoot mass under iron-limiting conditions, indicating that these genes are essential for proper plant growth. The double myb10myb72 mutant also showed nickel and zinc sensitivity, similar to the nas4 mutant. Ectopic expression of NAS4 rescues myb10myb72 plants, suggesting that loss of NAS4 is the primary defect in these plants and emphasizes the importance of nicotianamine, an iron chelator, in iron homeostasis. Overall, our results provide evidence that MYB10 and MYB72 act early in the iron-deficiency regulatory cascade to drive gene expression of NAS4 and are essential for plant survival under iron deficiency.
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Affiliation(s)
- Christine M. Palmer
- Department of Biological Sciences, Dartmouth College, Hanover, New Hampshire, United States of America
| | - Maria N. Hindt
- Department of Biological Sciences, Dartmouth College, Hanover, New Hampshire, United States of America
| | - Holger Schmidt
- Department of Plant Physiology, University of Bayreuth, Bayreuth, Germany
| | - Stephan Clemens
- Department of Plant Physiology, University of Bayreuth, Bayreuth, Germany
| | - Mary Lou Guerinot
- Department of Biological Sciences, Dartmouth College, Hanover, New Hampshire, United States of America
- * E-mail:
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